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ONTOLOGY REPORT - ANNOTATIONS


Term:cellular response to metal ion
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Accession:GO:0071248 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a metal ion stimulus.
Synonyms:exact_synonym: cellular response to metal
 narrow_synonym: cellular response to heavy metal



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cellular response to metal ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd86 CD86 molecule IEP titanium oxide particles RGD PMID:19653805 RGD:4892213 NCBI chr11:64,142,193...64,200,816
Ensembl chr11:64,163,828...64,200,818
JBrowse link
G Fstl3 follistatin like 3 IEP potassium RGD PMID:14692692 RGD:1302294 NCBI chr 7:9,924,670...9,929,195
Ensembl chr 7:9,923,576...9,939,639
JBrowse link
G Hsd17b1 hydroxysteroid (17-beta) dehydrogenase 1 IEP hexavalent chromium RGD PMID:18602937 RGD:4890967 NCBI chr10:86,009,728...86,011,928
Ensembl chr10:86,009,728...86,011,927
JBrowse link
G Hsd17b2 hydroxysteroid (17-beta) dehydrogenase 2 IEP hexavalent chromium RGD PMID:18602937 RGD:4890967 NCBI chr19:45,753,576...45,825,203
Ensembl chr19:45,753,574...45,825,202
JBrowse link
G Nqo1 NAD(P)H quinone dehydrogenase 1 IEP lanthanum RGD PMID:28722058 RGD:13439714 NCBI chr19:35,295,633...35,310,528
Ensembl chr19:35,295,573...35,310,557
JBrowse link
G Serpine1 serpin family E member 1 IEP barium RGD PMID:21596853 RGD:8547918 NCBI chr12:19,601,272...19,611,657
Ensembl chr12:19,601,272...19,611,657
JBrowse link
G Slc34a1 solute carrier family 34 member 1 IEP uranium RGD PMID:16476458 RGD:7243141 NCBI chr17:9,218,876...9,233,852
Ensembl chr17:9,218,876...9,233,852
JBrowse link
G Star steroidogenic acute regulatory protein IEP hexavalent chromium RGD PMID:18602937 RGD:4890967 NCBI chr16:66,267,094...66,274,368
Ensembl chr16:66,264,807...66,271,672
JBrowse link
G Tlr9 toll-like receptor 9 IEP tin
titanium
RGD PMID:21308757 PMID:17415764 RGD:5129495, RGD:5130196 NCBI chr 8:106,864,680...106,868,796
Ensembl chr 8:106,864,680...106,868,796
JBrowse link
cell motility in response to calcium ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Spag16 sperm associated antigen 16 acts_upstream_of_or_within ISO MGI:3606979 (MGI:4452319|PMID:20042536) RGD PMID:20042536 MGI:4452319 NCBI chr 9:71,333,005...72,252,772
Ensembl chr 9:71,332,992...72,252,708
JBrowse link
cellular detoxification of cadmium ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb6 ATP binding cassette subfamily B member 6 involved_in ISS
ISO
GO_REF:0000024
(PMID:31053883)
UniProt
RGD
PMID:31053883 GO_REF:0000024 NCBI chr 9:76,668,554...76,677,263
Ensembl chr 9:76,668,554...76,676,924
JBrowse link
cellular response to aluminum ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Becn1 beclin 1 IEP RGD PMID:22138567 RGD:6483058 NCBI chr10:86,231,387...86,246,742
Ensembl chr10:86,231,388...86,246,742
JBrowse link
G Entpd1 ectonucleoside triphosphate diphosphohydrolase 1 IEP RGD PMID:20832780 RGD:9685488 NCBI chr 1:239,425,515...239,552,323
Ensembl chr 1:239,425,430...239,552,317
JBrowse link
cellular response to cadmium ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1c3 aldo-keto reductase family 1, member C3 involved_in ISO (PMID:21787718) RGD PMID:21787718 NCBI chr17:66,110,970...66,127,867
Ensembl chr17:66,110,963...66,127,873
JBrowse link
G Akt1 AKT serine/threonine kinase 1 involved_in ISO (PMID:26514923) RGD PMID:26514923 NCBI chr 6:131,713,716...131,735,319
Ensembl chr 6:131,713,720...131,733,921
JBrowse link
G Atp7a ATPase copper transporting alpha IEP RGD PMID:17584760 RGD:8655656 NCBI chr  X:71,094,144...71,201,550
Ensembl chr  X:71,094,202...71,198,354
JBrowse link
G Cer1 cerberus 1, DAN family BMP antagonist acts_upstream_of_or_within ISO (MGI:6478982|PMID:15219627) RGD PMID:15219627 MGI:6478982 NCBI chr 5:97,306,427...97,309,783
Ensembl chr 5:97,306,431...97,309,783
JBrowse link
G Chuk component of inhibitor of nuclear factor kappa B kinase complex involved_in ISO (PMID:26514923) RGD PMID:26514923 NCBI chr 1:242,959,539...242,995,066
Ensembl chr 1:242,959,760...242,995,065
JBrowse link
G Cybb cytochrome b-245 beta chain IEP RGD PMID:21195169 RGD:11040689 NCBI chr  X:13,360,583...13,392,517
Ensembl chr  X:13,359,430...13,392,586
JBrowse link
G Cyp11a1 cytochrome P450, family 11, subfamily a, polypeptide 1 IEP RGD PMID:17719163 RGD:4835171 NCBI chr 8:58,422,807...58,434,342
Ensembl chr 8:58,404,669...58,434,338
JBrowse link
G Cyp1a2 cytochrome P450, family 1, subfamily a, polypeptide 2 acts_upstream_of_or_within ISO (MGI:3607883|PMID:16183037) RGD PMID:16183037 MGI:3607883 NCBI chr 8:58,075,367...58,082,255
Ensembl chr 8:58,075,367...58,082,312
JBrowse link
G Cyp2a3 cytochrome P450, family 2, subfamily a, polypeptide 3 acts_upstream_of_or_within ISO (MGI:3607883|PMID:16183037) RGD PMID:16183037 MGI:3607883 NCBI chr 1:82,171,914...82,179,980
Ensembl chr 1:82,169,949...82,179,979
JBrowse link
G Daxx death-domain associated protein involved_in ISS
ISO
GO_REF:0000024
(PMID:15016915)
UniProt
RGD
PMID:15016915 GO_REF:0000024 NCBI chr20:4,970,090...4,976,145
Ensembl chr20:4,970,092...4,975,843
JBrowse link
G Egfr epidermal growth factor receptor involved_in ISO (PMID:26514923) RGD PMID:26514923 NCBI chr14:91,176,931...91,349,722
Ensembl chr14:91,177,067...91,344,382
JBrowse link
G Enpp2 ectonucleotide pyrophosphatase/phosphodiesterase 2 IEP RGD PMID:24361405 RGD:9685430 NCBI chr 7:86,202,345...86,325,050
Ensembl chr 7:86,202,350...86,324,827
JBrowse link
G Fos Fos proto-oncogene, AP-1 transcription factor subunit involved_in ISO (PMID:26514923) RGD PMID:26514923 NCBI chr 6:105,121,170...105,124,036
Ensembl chr 6:105,121,170...105,124,036
JBrowse link
G Foxa2 forkhead box A2 acts_upstream_of_or_within ISO (MGI:6478982|PMID:15219627) RGD PMID:15219627 MGI:6478982 NCBI chr 3:135,470,123...135,474,326
Ensembl chr 3:135,470,131...135,474,326
JBrowse link
G Gsn gelsolin IDA RGD PMID:16280379 RGD:1599859 NCBI chr 3:18,585,166...18,638,404
Ensembl chr 3:18,585,172...18,638,402
JBrowse link
G Hesx1 HESX homeobox 1 acts_upstream_of_or_within ISO (MGI:6478982|PMID:15219627) RGD PMID:15219627 MGI:6478982 NCBI chr16:2,191,852...2,193,957
Ensembl chr16:2,191,852...2,193,957
JBrowse link
G Hmox1 heme oxygenase 1 acts_upstream_of_or_within ISO (MGI:3607883|PMID:16183037) RGD PMID:16183037 MGI:3607883 NCBI chr19:13,466,287...13,474,082
Ensembl chr19:13,467,244...13,474,079
JBrowse link
G Hsf1 heat shock transcription factor 1 involved_in ISO (PMID:10359787), (PMID:11514557), (PMID:15016915), (PMID:25963659) RGD PMID:10359787 PMID:11514557 PMID:15016915 PMID:25963659 NCBI chr 7:108,196,040...108,223,011
Ensembl chr 7:108,196,056...108,223,011
JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 IEP RGD PMID:9736451 RGD:10059378 NCBI chr 8:41,183,397...41,187,260
Ensembl chr 8:41,183,264...41,187,259
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit involved_in ISO (PMID:26514923) RGD PMID:26514923 NCBI chr 5:109,894,175...109,897,268
Ensembl chr 5:109,893,145...109,897,656
JBrowse link
G Mapk1 mitogen activated protein kinase 1 involved_in ISO (PMID:26514923) RGD PMID:26514923 NCBI chr11:83,957,813...84,023,629
Ensembl chr11:83,957,813...84,023,616
JBrowse link
G Mapk3 mitogen activated protein kinase 3 involved_in ISO (PMID:26514923) RGD PMID:26514923 NCBI chr 1:181,366,646...181,372,863
Ensembl chr 1:181,366,637...181,372,863
JBrowse link
G Mapk8 mitogen-activated protein kinase 8 involved_in ISO (PMID:26514923) RGD PMID:26514923 NCBI chr16:8,638,897...8,721,960
Ensembl chr16:8,638,924...8,721,981
JBrowse link
G Mapk9 mitogen-activated protein kinase 9 involved_in ISO (PMID:26514923) RGD PMID:26514923 NCBI chr10:34,169,661...34,211,138
Ensembl chr10:34,169,675...34,210,178
JBrowse link
G Mmp9 matrix metallopeptidase 9 involved_in ISO
IEA
(PMID:26514923)
GO_REF:0000107
RGD
Ensembl
PMID:26514923 GO_REF:0000107 NCBI chr 3:153,684,158...153,692,118
Ensembl chr 3:153,683,858...153,692,120
JBrowse link
G Mt1 metallothionein 1 involved_in IBA
ISO
PMID:21873635
(PMID:16827180)
RGD PMID:16827180 PMID:21873635 RGD:13792537 NCBI chr19:10,826,032...10,827,048
Ensembl chr19:10,826,032...10,827,049
JBrowse link
G Mt1-ps3 metallothionein 1, pseudogene 3 involved_in ISO (PMID:16827180), (PMID:19330122), (PMID:3403543) RGD PMID:3403543 PMID:16827180 PMID:19330122 NCBI chr17:74,786,652...74,787,040
Ensembl chr17:74,786,654...74,787,135
JBrowse link
G Mt1m metallothionein 1M involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:3,159,023...3,159,401
Ensembl chr 5:119,728,811...119,730,073
Ensembl chr19:119,728,811...119,730,073
JBrowse link
G Mt2A metallothionein 2A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:10,832,009...10,832,783
Ensembl chr19:10,832,002...10,832,784
JBrowse link
G Mt3 metallothionein 3 involved_in IBA
ISS
ISO
PMID:21873635
GO_REF:0000024
(PMID:16387743)
UniProt
RGD
PMID:16387743 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr19:10,848,754...10,850,158
Ensembl chr19:10,848,755...10,850,158
JBrowse link
G Mt4 metallothionein 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:10,863,813...10,865,909
Ensembl chr19:10,863,813...10,865,909
JBrowse link
G Ncf1 neutrophil cytosolic factor 1 involved_in ISO (PMID:26514923) RGD PMID:26514923 NCBI chr12:22,485,382...22,494,647
Ensembl chr12:22,485,451...22,494,646
JBrowse link
G Ogg1 8-oxoguanine DNA glycosylase IEP RGD PMID:12499121 RGD:2317151 NCBI chr 4:146,474,701...146,481,959
Ensembl chr 4:146,474,750...146,484,766
JBrowse link
G Ppp5c protein phosphatase 5, catalytic subunit IEP RGD PMID:18703135 RGD:8694082 NCBI chr 1:77,690,203...77,714,507
Ensembl chr 1:77,690,208...77,714,456
JBrowse link
G Sod1 superoxide dismutase 1 IEP RGD PMID:17584760 RGD:8655656 NCBI chr11:29,456,673...29,462,249
Ensembl chr11:29,456,558...29,462,249
JBrowse link
G Sox2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO (MGI:6478982|PMID:15219627) RGD PMID:15219627 MGI:6478982 NCBI chr 2:117,536,929...117,539,338
Ensembl chr 2:117,536,929...117,539,338
JBrowse link
G Star steroidogenic acute regulatory protein IEP RGD PMID:17719163 RGD:4835171 NCBI chr16:66,267,094...66,274,368
Ensembl chr16:66,264,807...66,271,672
JBrowse link
G Sumo1 small ubiquitin-like modifier 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:11514557)
UniProt
RGD
PMID:11514557 GO_REF:0000024 NCBI chr 9:61,078,790...61,108,697
Ensembl chr 9:61,077,435...61,108,761
JBrowse link
G Ube2d2b ubiquitin-conjugating enzyme E2D 2B IEP RGD PMID:21467746 RGD:13830870 NCBI chr14:1,915,999...1,917,473
Ensembl chr14:1,916,845...1,917,416
JBrowse link
G Ube2d3 ubiquitin-conjugating enzyme E2D 3 IEP RGD PMID:21467746 RGD:13830870 NCBI chr 2:223,868,397...223,899,606
Ensembl chr 2:223,868,730...223,898,081
JBrowse link
cellular response to calcium ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acer1 alkaline ceramidase 1 involved_in ISO (PMID:17713573) RGD PMID:17713573 NCBI chr 9:1,792,790...1,824,434
Ensembl chr 9:1,793,139...1,824,434
JBrowse link
G Adcy8 adenylate cyclase 8 involved_in IEP
IDA
PMID:20410303
PMID:19158400
RGD
UniProt
PMID:19305019 PMID:20410303 PMID:19158400 RGD:7241269, RGD:7242424, RGD:13800545 NCBI chr 7:96,417,310...96,665,911
Ensembl chr 7:96,417,324...96,665,911
JBrowse link
G Add1 adducin 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:5796260|PMID:25978380)
(PMID:25978380)
Ensembl
RGD
PMID:25978380 GO_REF:0000107 MGI:5796260 NCBI chr14:76,108,643...76,167,267
Ensembl chr14:76,108,654...76,167,182
JBrowse link
G Adgrv1 adhesion G protein-coupled receptor V1 acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:5523726|PMID:24191038)
PMID:21873635
RGD PMID:24191038 PMID:21873635 MGI:5523726, RGD:13792537 NCBI chr 2:11,331,434...11,911,713
Ensembl chr 2:11,331,442...11,911,688
JBrowse link
G Akr1c3 aldo-keto reductase family 1, member C3 involved_in ISO (PMID:22170488) RGD PMID:22170488 NCBI chr17:66,110,970...66,127,867
Ensembl chr17:66,110,963...66,127,873
JBrowse link
G Alox15 arachidonate 15-lipoxygenase involved_in ISO
ISS
(PMID:17052953)
GO_REF:0000024
RGD
UniProt
PMID:17052953 GO_REF:0000024 NCBI chr10:55,060,169...55,068,885
Ensembl chr10:55,060,412...55,068,874
JBrowse link
G Alox5ap arachidonate 5-lipoxygenase activating protein involved_in ISO (PMID:2300173) RGD PMID:2300173 NCBI chr12:5,748,941...5,772,986
Ensembl chr12:5,748,944...5,772,986
JBrowse link
G Asph aspartate-beta-hydroxylase involved_in ISO (PMID:21062895) RGD PMID:21062895 NCBI chr 5:22,603,879...22,814,107
Ensembl chr 5:22,603,486...22,813,876
JBrowse link
G Braf B-Raf proto-oncogene, serine/threonine kinase involved_in ISO (PMID:18567582) RGD PMID:18567582 NCBI chr 4:68,375,484...68,510,652
Ensembl chr 4:68,384,649...68,510,463
JBrowse link
G Cacybp calcyclin binding protein IEP RGD PMID:11927578 RGD:625428 NCBI chr13:72,437,485...72,447,810
Ensembl chr13:72,437,490...72,450,177
JBrowse link
G Capn3 calpain 3 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:4839427|PMID:20460380)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:20460380 GO_REF:0000024 GO_REF:0000107 MGI:4839427 NCBI chr 3:107,407,518...107,457,858
Ensembl chr 3:107,407,850...107,457,858
JBrowse link
G Carf calcium responsive transcription factor involved_in ISO
IDA
ISS
(PMID:11832226), (PMID:22174809)
GO_REF:0000024
RGD
UniProt
PMID:11832226 PMID:22174809 PMID:11832226 GO_REF:0000024, RGD:8553337 NCBI chr 9:61,502,368...61,552,433
Ensembl chr 9:61,506,956...61,550,462
JBrowse link
G Chp2 calcineurin-like EF hand protein 2 involved_in ISO
ISS
(PMID:18815128)
GO_REF:0000024
RGD
UniProt
PMID:18815128 GO_REF:0000024 NCBI chr 1:176,757,945...176,772,443
Ensembl chr 1:176,757,876...176,772,139
JBrowse link
G Clic4 chloride intracellular channel 4 involved_in ISO (PMID:17636002) RGD PMID:17636002 NCBI chr 5:147,456,819...147,513,278
Ensembl chr 5:147,453,712...147,513,452
JBrowse link
G Cpne1 copine 1 involved_in ISO
IBA
(PMID:14674885)
PMID:21873635
RGD PMID:14674885 PMID:21873635 RGD:13792537 NCBI chr 3:144,587,548...144,629,603
Ensembl chr 3:144,588,995...144,598,636
JBrowse link
G Cpne2 copine 2 involved_in ISO
IBA
(MGI:5634886|PMID:21087455)
PMID:21873635
RGD PMID:21087455 PMID:21873635 MGI:5634886, RGD:13792537 NCBI chr19:10,434,277...10,472,146
Ensembl chr19:10,434,277...10,471,820
JBrowse link
G Cpne3 copine 3 involved_in ISO
IBA
(PMID:20010870), (PMID:21087455)
PMID:21873635
RGD PMID:20010870 PMID:21087455 PMID:21873635 RGD:13792537 NCBI chr 5:33,014,658...33,064,004
Ensembl chr 5:33,016,307...33,063,934
JBrowse link
G Cpne4 copine 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:105,177,376...105,653,075
Ensembl chr 8:105,177,376...105,653,068
JBrowse link
G Cpne5 copine 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:7,206,742...7,289,309
Ensembl chr20:7,206,742...7,288,883
JBrowse link
G Cpne6 copine 6 involved_in ISO
IBA
(MGI:5634886|PMID:21087455)
PMID:21873635
RGD PMID:21087455 PMID:21873635 MGI:5634886, RGD:13792537 NCBI chr15:28,998,293...29,005,044
Ensembl chr15:28,998,293...29,005,044
JBrowse link
G Cpne7 copine 7 involved_in ISO
IBA
(PMID:21087455)
PMID:21873635
RGD PMID:21087455 PMID:21873635 RGD:13792537 NCBI chr19:51,164,316...51,182,677
Ensembl chr19:51,166,034...51,182,677
JBrowse link
G Cpne8 copine 8 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:121,615,293...121,789,507
Ensembl chr 7:121,615,294...121,790,377
JBrowse link
G Cpne9 copine family member 9 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:146,429,961...146,454,335
Ensembl chr 4:146,430,792...146,454,333
JBrowse link
G Crhbp corticotropin releasing hormone binding protein involved_in ISS
ISO
GO_REF:0000024
(MGI:5315350|PMID:15976007)
UniProt
RGD
PMID:15976007 GO_REF:0000024 MGI:5315350 NCBI chr 2:26,692,403...26,704,710
Ensembl chr 2:26,692,403...26,704,710
JBrowse link
G Crp C-reactive protein IDA RGD PMID:22090504 RGD:6904210 NCBI chr13:85,131,635...85,175,179
Ensembl chr13:85,124,977...85,175,178
JBrowse link
G Dmtn dematin actin binding protein involved_in ISO (MGI:5465511|PMID:23060452) RGD PMID:23060452 MGI:5465511 NCBI chr15:45,677,974...45,705,601
Ensembl chr15:45,677,977...45,705,601
JBrowse link
G Dpep1 dipeptidase 1 involved_in ISO
ISS
(PMID:11139399), (PMID:17615681)
GO_REF:0000024
RGD
UniProt
PMID:11139399 PMID:17615681 GO_REF:0000024 NCBI chr19:51,209,831...51,237,004
Ensembl chr19:51,219,660...51,235,257
JBrowse link
G Ect2 epithelial cell transforming 2 involved_in ISO (PMID:15254234) RGD PMID:15254234 NCBI chr 2:109,975,813...110,037,911
Ensembl chr 2:109,975,813...110,037,911
JBrowse link
G Edn1 endothelin 1 IEP RGD PMID:1852000 RGD:8662267 NCBI chr17:22,454,924...22,460,812
Ensembl chr17:22,454,420...22,460,885
JBrowse link
G Eef2k eukaryotic elongation factor-2 kinase IEP RGD PMID:19188248 RGD:10401231 NCBI chr 1:175,393,119...175,454,452
Ensembl chr 1:175,393,154...175,455,164
JBrowse link
G Endog endonuclease G IEP RGD PMID:12582256 RGD:9685368 NCBI chr 3:13,449,113...13,451,715
Ensembl chr 3:13,449,086...13,451,932
JBrowse link
G Fos Fos proto-oncogene, AP-1 transcription factor subunit acts_upstream_of_or_within ISO (MGI:3844178|PMID:19365557) RGD PMID:19365557 MGI:3844178 NCBI chr 6:105,121,170...105,124,036
Ensembl chr 6:105,121,170...105,124,036
JBrowse link
G Fosb FosB proto-oncogene, AP-1 transcription factor subunit acts_upstream_of_or_within ISO (MGI:3846264|PMID:19303854) RGD PMID:19303854 MGI:3846264 NCBI chr 1:78,954,312...78,961,492
Ensembl chr 1:78,954,115...78,961,465
JBrowse link
G Fus Fus RNA binding protein IDA RGD PMID:19103256 RGD:9685716 NCBI chr 1:182,576,479...182,590,417
Ensembl chr 1:182,576,545...182,590,414
JBrowse link
G Gpld1 glycosylphosphatidylinositol specific phospholipase D1 involved_in IDA
IEA
ISO
PMID:1849823
GO_REF:0000107
(PMID:2760042)
Ensembl
RGD
PMID:2760042 PMID:1849823 GO_REF:0000107, RGD:8553426 NCBI chr17:40,084,427...40,132,035
Ensembl chr17:40,084,617...40,126,939
JBrowse link
G Hpca hippocalcin involved_in ISO
ISS
(PMID:28398555)
GO_REF:0000024
RGD
UniProt
PMID:28398555 GO_REF:0000024 NCBI chr 5:141,455,616...141,466,252
Ensembl chr 5:141,455,613...141,463,841
JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 IEP RGD PMID:9058202 RGD:11354978 NCBI chr 3:18,055,507...18,059,969
Ensembl chr 3:18,055,405...18,059,891
JBrowse link
G Inhbb inhibin subunit beta B IEP RGD PMID:1634019 RGD:9743923 NCBI chr13:30,530,860...30,536,566
Ensembl chr13:30,530,860...30,537,832
JBrowse link
G Iqgap1 IQ motif containing GTPase activating protein 1 involved_in ISO (PMID:18567582) RGD PMID:18567582 NCBI chr 1:134,679,581...134,769,776
Ensembl chr 1:134,679,586...134,769,755
JBrowse link
G Itpka inositol-trisphosphate 3-kinase A involved_in ISS
ISO
GO_REF:0000024
(PMID:12747803)
UniProt
RGD
PMID:12747803 GO_REF:0000024 NCBI chr 3:106,726,036...106,734,601
Ensembl chr 3:106,726,036...106,734,600
JBrowse link
G Itpkb inositol-trisphosphate 3-kinase B involved_in ISO
ISS
(PMID:1654894)
(PMID:12747803), (PMID:1654894)
GO_REF:0000024
RGD
UniProt
PMID:1654894 PMID:12747803 GO_REF:0000024 NCBI chr13:92,069,160...92,164,281
Ensembl chr13:92,069,216...92,162,004
JBrowse link
G Itpkc inositol-trisphosphate 3-kinase C involved_in ISS
ISO
GO_REF:0000024
(PMID:12747803)
UniProt
RGD
PMID:12747803 GO_REF:0000024 NCBI chr 1:82,500,957...82,522,533
Ensembl chr 1:82,500,957...82,522,779
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit acts_upstream_of_or_within ISO (MGI:3846264|PMID:19303854) RGD PMID:19303854 MGI:3846264 NCBI chr 5:109,894,175...109,897,268
Ensembl chr 5:109,893,145...109,897,656
JBrowse link
G Junb JunB proto-oncogene, AP-1 transcription factor subunit acts_upstream_of_or_within ISO (MGI:3846264|PMID:19303854) RGD PMID:19303854 MGI:3846264 NCBI chr19:23,176,265...23,178,049
Ensembl chr19:23,176,294...23,178,035
JBrowse link
G Jund JunD proto-oncogene, AP-1 transcription factor subunit acts_upstream_of_or_within ISO (MGI:3846264|PMID:19303854) RGD PMID:19303854 MGI:3846264 NCBI chr16:18,734,121...18,735,799
Ensembl chr16:18,734,122...18,735,799
JBrowse link
G Kcnb1 potassium voltage-gated channel subfamily B member 1 IDA RGD PMID:8978827 RGD:150527856 NCBI chr 3:155,820,255...155,913,383
Ensembl chr 3:155,822,963...155,916,194
JBrowse link
G Kcnh1 potassium voltage-gated channel subfamily H member 1 involved_in IDA
ISO
(PMID:27005320), (PMID:27325704)
PMID:27516594
RGD PMID:27005320 PMID:27325704 PMID:8790430 PMID:27516594 RGD:9693720, RGD:11533419 NCBI chr13:103,722,140...104,024,762
Ensembl chr13:103,722,245...104,024,740
JBrowse link
G Krt10 keratin 10 acts_upstream_of_or_within ISO (MGI:3846264|PMID:19303854) RGD PMID:19303854 MGI:3846264 NCBI chr10:84,338,695...84,343,279
Ensembl chr10:84,338,706...84,343,701
JBrowse link
G Lce1d late cornified envelope 1D acts_upstream_of_or_within ISO (PMID:11698679) RGD PMID:11698679
G Lgmn legumain involved_in ISO
IEA
(PMID:21237226)
GO_REF:0000107
RGD
Ensembl
PMID:21237226 GO_REF:0000107 NCBI chr 6:121,544,048...121,582,495
Ensembl chr 6:121,544,053...121,582,480
JBrowse link
G Mcoln1 mucolipin TRP cation channel 1 involved_in ISO (MGI:6103412|PMID:29019981) RGD PMID:29019981 MGI:6103412 NCBI chr12:1,560,341...1,574,252
Ensembl chr12:1,560,359...1,574,252
JBrowse link
G Mef2a myocyte enhancer factor 2a involved_in IDA
IEA
ISO
PMID:10521511
GO_REF:0000107
(PMID:16484498)
Ensembl
RGD
PMID:16484498 PMID:10521511 GO_REF:0000107, RGD:8553671 NCBI chr 1:120,847,874...120,982,488
Ensembl chr 1:120,850,080...120,981,948
JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISS
ISO
GO_REF:0000024
(MGI:5284792|PMID:15998798)
UniProt
RGD
PMID:15998798 GO_REF:0000024 MGI:5284792 NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880
JBrowse link
G Mylk myosin light chain kinase acts_upstream_of_or_within ISO (MGI:3805620|PMID:18524939) RGD PMID:18524939 MGI:3805620 NCBI chr11:65,783,008...66,030,239
Ensembl chr11:65,783,008...66,030,261
JBrowse link
G Ncstn nicastrin acts_upstream_of_or_within ISO MGI:3796837 (MGI:5575797|PMID:24889619) RGD PMID:24889619 MGI:5575797 NCBI chr13:84,530,442...84,546,454
Ensembl chr13:84,530,440...84,546,454
JBrowse link
G Neurod2 neuronal differentiation 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:3621523|PMID:16504944)
UniProt
RGD
PMID:16504944 GO_REF:0000024 MGI:3621523 NCBI chr10:83,323,801...83,327,986
Ensembl chr10:83,324,442...83,327,986
JBrowse link
G Nfatc3 nuclear factor of activated T-cells 3 acts_upstream_of_or_within ISO (MGI:5490841|PMID:23219532) RGD PMID:23219532 MGI:5490841 NCBI chr19:33,960,643...34,035,150
Ensembl chr19:33,960,852...34,035,150
JBrowse link
G Nlgn1 neuroligin 1 involved_in IDA PMID:14522992 ARUK-UCL PMID:14522992 RGD:13210536 NCBI chr 2:108,256,236...109,181,530
Ensembl chr 2:108,257,824...109,002,464
JBrowse link
G Nrxn1 neurexin 1 involved_in IDA PMID:14522992 ARUK-UCL PMID:14522992 RGD:13210536 NCBI chr 6:3,177,788...4,323,848
Ensembl chr 6:3,177,897...4,322,710
JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in ISO (MGI:5883145|PMID:27760766) RGD PMID:27760766 MGI:5883145 NCBI chr14:5,237,135...5,280,455
Ensembl chr14:5,237,135...5,280,825
JBrowse link
G Plcg2 phospholipase C, gamma 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:11606584)
Ensembl
RGD
PMID:11606584 GO_REF:0000107 NCBI chr19:45,547,416...45,683,930
Ensembl chr19:45,547,416...45,683,930
JBrowse link
G Ppif peptidylprolyl isomerase F involved_in ISS
ISO
GO_REF:0000024
(MGI:3575990|PMID:15800627), (MGI:3576003|PMID:15800626), (MGI:3603054|PMID:16103352)
UniProt
RGD
PMID:15800626 PMID:15800627 PMID:16103352 GO_REF:0000024 MGI:3575990 MGI:3576003 MGI:3603054 NCBI chr16:1,257,197...1,263,919
Ensembl chr16:1,257,106...1,263,913
JBrowse link
G Ppp2ca protein phosphatase 2 catalytic subunit alpha IEP RGD PMID:18322138 RGD:8693423 NCBI chr10:36,358,110...36,377,864
Ensembl chr10:36,358,101...36,377,862
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in IMP
ISO
PMID:25788287
UniProtKB:Q8BRK8 (MGI:6148484|PMID:25788287)
RGD PMID:25788287 PMID:25788287 MGI:6148484, RGD:13514090 NCBI chr 2:54,240,298...54,275,978
Ensembl chr 2:54,240,137...54,275,978
JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in IEA
ISO
IMP
GO_REF:0000107
UniProtKB:Q5EG47 (MGI:6148484|PMID:25788287)
Ensembl
RGD
PMID:25788287 PMID:25788287 GO_REF:0000107 MGI:6148484, RGD:13514090 NCBI chr 5:119,807,992...119,879,987
Ensembl chr 5:119,813,226...119,879,543
JBrowse link
G Rasa4 RAS p21 protein activator 4 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr12:20,552,805...20,580,177
Ensembl chr12:20,552,806...20,580,147
JBrowse link
G Rasal1 RAS protein activator like 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr12:35,881,269...35,913,727
Ensembl chr12:35,881,270...35,913,727
JBrowse link
G Rasgrp2 RAS guanyl releasing protein 2 involved_in ISO
IEA
(PMID:24958846)
GO_REF:0000107
RGD
Ensembl
PMID:24958846 GO_REF:0000107 NCBI chr 1:203,705,777...203,722,993
Ensembl chr 1:203,707,481...203,722,993
JBrowse link
G Rbm12 RNA binding motif protein 12 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:144,587,548...144,629,950
Ensembl chr 3:144,611,623...144,629,915
Ensembl chr 3:144,611,623...144,629,915
JBrowse link
G Ryr1 ryanodine receptor 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 1:84,292,578...84,423,799
Ensembl chr 1:84,292,578...84,423,812
JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 involved_in ISO
IEA
ISS
(PMID:19074138)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:19074138 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:119,220,905...119,318,816
Ensembl chr 8:119,220,905...119,318,769
JBrowse link
G Slc25a23 solute carrier family 25 member 23 acts_upstream_of_or_within ISO MGI:5500043 (MGI:5490167|PMID:23344948) RGD PMID:23344948 MGI:5490167 NCBI chr 9:1,882,636...1,898,340
Ensembl chr 9:1,882,621...1,898,561
JBrowse link
G Slc25a24 solute carrier family 25 member 24 involved_in ISO (PMID:22015608) RGD PMID:22015608 NCBI chr 2:196,761,076...196,799,236
Ensembl chr 2:196,761,274...196,799,231
JBrowse link
G Smpd1 sphingomyelin phosphodiesterase 1 involved_in ISO (PMID:20530211) RGD PMID:20530211 NCBI chr 1:159,892,946...159,896,789
Ensembl chr 1:159,892,859...159,896,794
JBrowse link
G Syt1 synaptotagmin 1 involved_in IBA
IMP
PMID:21873635
PMID:12526776
GO_Central
ParkinsonsUK-UCL
PMID:21873635 PMID:12526776 RGD:13792537, RGD:10047386 NCBI chr 7:43,813,204...44,358,020
Ensembl chr 7:43,815,785...44,357,803
JBrowse link
G Syt10 synaptotagmin 10 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:120,863,014...120,920,730
Ensembl chr 7:120,862,972...120,920,863
JBrowse link
G Syt11 synaptotagmin 11 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:174,206,032...174,232,540
Ensembl chr 2:174,206,191...174,231,964
JBrowse link
G Syt12 synaptotagmin 12 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:201,729,307...201,760,192
Ensembl chr 1:201,730,371...201,759,609
JBrowse link
G Syt13 synaptotagmin 13 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:78,877,200...78,915,375
Ensembl chr 3:78,877,114...78,917,392
JBrowse link
G Syt15 synaptotagmin 15 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:9,532,478...9,543,288
Ensembl chr16:9,532,478...9,543,281
JBrowse link
G Syt17 synaptotagmin 17 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:172,695,275...172,761,906
Ensembl chr 1:172,696,120...172,761,960
JBrowse link
G Syt2 synaptotagmin 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:46,088,046...46,197,976
Ensembl chr13:46,185,282...46,193,859
JBrowse link
G Syt3 synaptotagmin 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:94,880,835...94,895,518
Ensembl chr 1:94,881,247...94,895,246
JBrowse link
G Syt4 synaptotagmin 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:23,036,973...23,046,380
Ensembl chr18:23,038,378...23,046,332
JBrowse link
G Syt5 synaptotagmin 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:69,277,351...69,285,071
Ensembl chr 1:69,277,351...69,285,067
JBrowse link
G Syt6 synaptotagmin 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:191,093,009...191,152,283
Ensembl chr 2:191,093,007...191,149,956
JBrowse link
G Syt7 synaptotagmin 7 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:207,031,369...207,093,787
Ensembl chr 1:207,031,592...207,089,026
JBrowse link
G Syt8 synaptotagmin 8 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:197,588,126...197,593,598
Ensembl chr 1:197,590,149...197,593,504
JBrowse link
G Syt9 synaptotagmin 9 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:161,275,882...161,456,384
Ensembl chr 1:161,275,734...161,455,007
JBrowse link
G Tjp1 tight junction protein 1 involved_in ISO (PMID:8636221) RGD PMID:8636221 NCBI chr 1:118,849,838...119,094,492
Ensembl chr 1:118,849,838...119,094,432
JBrowse link
G Trpm2 transient receptor potential cation channel, subfamily M, member 2 involved_in ISO
ISS
(PMID:19171771)
GO_REF:0000024
RGD
UniProt
PMID:19171771 GO_REF:0000024 NCBI chr20:10,703,568...10,753,189
Ensembl chr20:10,707,014...10,753,181
JBrowse link
G Tuba1a tubulin, alpha 1A involved_in ISO (MGI:5896703|PMID:27793670) RGD PMID:27793670 MGI:5896703 NCBI chr 7:130,113,214...130,116,880
Ensembl chr 7:130,081,032...130,196,186
JBrowse link
G Wnk1 WNK lysine deficient protein kinase 1 involved_in IDA PMID:24803536 UniProt PMID:24803536 RGD:12910999 NCBI chr 4:153,128,334...153,253,905
Ensembl chr 4:153,128,334...153,253,905
JBrowse link
G Wnt5a Wnt family member 5A involved_in ISO (PMID:18703641) RGD PMID:18703641 NCBI chr16:3,695,667...3,718,234
Ensembl chr16:3,697,032...3,718,234
JBrowse link
cellular response to cobalt ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp7a ATPase copper transporting alpha IEP RGD PMID:23814049 RGD:11341692 NCBI chr  X:71,094,144...71,201,550
Ensembl chr  X:71,094,202...71,198,354
JBrowse link
G Bnip3 BCL2 interacting protein 3 involved_in ISO (PMID:20436456) RGD PMID:20436456 NCBI chr 1:193,708,164...193,725,348
Ensembl chr 1:193,708,167...193,725,359
JBrowse link
G Fas Fas cell surface death receptor IEP RGD PMID:15519734 RGD:8662904 NCBI chr 1:231,798,963...231,832,591
Ensembl chr 1:231,798,960...231,832,591
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha IEP RGD PMID:10559391 RGD:2313660 NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
JBrowse link
G Serpinf1 serpin family F member 1 IEP RGD PMID:21922517 RGD:8554899 NCBI chr10:60,250,198...60,262,593
Ensembl chr10:60,249,708...60,262,646
JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase involved_in ISO (PMID:25928429) RGD PMID:25928429 NCBI chr 4:159,927,138...159,946,094
Ensembl chr 4:159,927,139...159,946,029
JBrowse link
cellular response to copper ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aoc1 amine oxidase, copper containing 1 involved_in ISO
ISS
(PMID:9399025)
GO_REF:0000024
RGD
UniProt
PMID:9399025 GO_REF:0000024 NCBI chr 4:77,812,260...77,831,846
Ensembl chr 4:77,812,260...77,831,840
JBrowse link
G App amyloid beta precursor protein IEP RGD PMID:18583042 RGD:13782134 NCBI chr11:24,019,774...24,236,584
Ensembl chr11:24,019,778...24,236,561
JBrowse link
G Aqp1 aquaporin 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:7491270), (PMID:8584435)
UniProt
RGD
PMID:7491270 PMID:8584435 GO_REF:0000024 NCBI chr 4:84,482,512...84,494,690
Ensembl chr 4:84,482,512...84,494,690
JBrowse link
G Aqp2 aquaporin 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:8584435)
Ensembl
RGD
PMID:8584435 GO_REF:0000107 NCBI chr 7:130,711,433...130,716,468
Ensembl chr 7:130,711,413...130,716,468
JBrowse link
G Atp7a ATPase copper transporting alpha IEP
IDA
RGD PMID:23174565 PMID:20671235 RGD:11341702, RGD:11341707 NCBI chr  X:71,094,144...71,201,550
Ensembl chr  X:71,094,202...71,198,354
JBrowse link
G Atp7b ATPase copper transporting beta IMP
IEP
RGD PMID:24614235 PMID:24614235 RGD:11341682, RGD:11341682 NCBI chr16:69,952,286...70,024,404
Ensembl chr16:69,951,778...70,023,636
JBrowse link
G Bace1 beta-secretase 1 IEP RGD PMID:18583042 RGD:13782134 NCBI chr 8:46,142,060...46,166,268
Ensembl chr 8:46,142,116...46,165,876
JBrowse link
G Becn1 beclin 1 IEP RGD PMID:22540380 RGD:11561917 NCBI chr10:86,231,387...86,246,742
Ensembl chr10:86,231,388...86,246,742
JBrowse link
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 IEP RGD PMID:24599699 RGD:11352816 NCBI chr 8:58,096,021...58,102,130
Ensembl chr 8:58,096,077...58,102,125
JBrowse link
G Cyp1a2 cytochrome P450, family 1, subfamily a, polypeptide 2 IEP RGD PMID:24599699 RGD:11352816 NCBI chr 8:58,075,367...58,082,255
Ensembl chr 8:58,075,367...58,082,312
JBrowse link
G Daxx death-domain associated protein involved_in ISO
ISS
(PMID:15016915)
GO_REF:0000024
RGD
UniProt
PMID:15016915 GO_REF:0000024 NCBI chr20:4,970,090...4,976,145
Ensembl chr20:4,970,092...4,975,843
JBrowse link
G Eln elastin IEP RGD PMID:18847363 RGD:9585685 NCBI chr12:21,968,544...22,011,929
Ensembl chr12:21,968,544...22,011,928
JBrowse link
G Hsf1 heat shock transcription factor 1 involved_in ISO (PMID:15016915) RGD PMID:15016915 NCBI chr 7:108,196,040...108,223,011
Ensembl chr 7:108,196,056...108,223,011
JBrowse link
G Map1lc3a microtubule-associated protein 1 light chain 3 alpha IEP RGD PMID:22540380 RGD:11561917 NCBI chr 3:143,783,024...143,784,670
Ensembl chr 3:143,783,024...143,784,670
JBrowse link
G Mt1 metallothionein 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:10,826,032...10,827,048
Ensembl chr19:10,826,032...10,827,049
JBrowse link
G Mt1-ps3 metallothionein 1, pseudogene 3 involved_in ISO (PMID:3403543) RGD PMID:3403543 NCBI chr17:74,786,652...74,787,040
Ensembl chr17:74,786,654...74,787,135
JBrowse link
G Mt1m metallothionein 1M involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:3,159,023...3,159,401
Ensembl chr 5:119,728,811...119,730,073
Ensembl chr19:119,728,811...119,730,073
JBrowse link
G Mt2A metallothionein 2A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:10,832,009...10,832,783
Ensembl chr19:10,832,002...10,832,784
JBrowse link
G Mt3 metallothionein 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:10,848,754...10,850,158
Ensembl chr19:10,848,755...10,850,158
JBrowse link
G Mt4 metallothionein 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:10,863,813...10,865,909
Ensembl chr19:10,863,813...10,865,909
JBrowse link
G Nfe2l1 NFE2 like bZIP transcription factor 1 acts_upstream_of_or_within ISO MGI:2385929 (MGI:5577246|PMID:24462598) RGD PMID:24462598 MGI:5577246 NCBI chr10:81,796,055...81,812,926
Ensembl chr10:81,800,366...81,832,318
JBrowse link
G Nfe2l2 NFE2 like bZIP transcription factor 2 acts_upstream_of_or_within ISO MGI:2385925 (MGI:5577246|PMID:24462598) RGD PMID:24462598 MGI:5577246 NCBI chr 3:60,594,239...60,621,785
Ensembl chr 3:60,594,242...60,621,737
JBrowse link
G Prnp prion protein acts_upstream_of_or_within ISO (PMID:16254249) RGD PMID:16254249 NCBI chr 3:119,186,073...119,201,513
Ensembl chr 3:119,177,485...119,203,937
JBrowse link
G Snca synuclein alpha involved_in ISO (PMID:21320589) RGD PMID:21320589 NCBI chr 4:89,696,420...89,797,240
Ensembl chr 4:89,696,420...89,796,262
JBrowse link
G Txnrd1 thioredoxin reductase 1 IEP RGD PMID:19781568 RGD:5130971 NCBI chr 7:20,830,042...20,914,990
Ensembl chr 7:20,830,045...20,907,863
JBrowse link
cellular response to iron ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp7a ATPase copper transporting alpha IEP RGD PMID:23174565 PMID:19679821 RGD:11341702, RGD:11341808 NCBI chr  X:71,094,144...71,201,550
Ensembl chr  X:71,094,202...71,198,354
JBrowse link
G B2m beta-2 microglobulin involved_in ISO UniProtKB:P02787|UniProtKB:Q07891|UniProtKB:Q30201|UniProtKB:Q9UP52 (PMID:18353247) RGD PMID:18353247 NCBI chr 3:109,095,740...109,101,764
Ensembl chr 3:109,095,729...109,101,766
JBrowse link
G Bmp6 bone morphogenetic protein 6 involved_in ISO (MGI:4352622|PMID:19252488) RGD PMID:19252488 MGI:4352622 NCBI chr17:26,318,121...26,469,034
Ensembl chr17:26,318,569...26,470,365
JBrowse link
G Hfe homeostatic iron regulator involved_in ISO UniProtKB:P02787|UniProtKB:P61769|UniProtKB:Q07891|UniProtKB:Q9UP52 (PMID:18353247) RGD PMID:18353247 NCBI chr17:41,413,451...41,421,502
Ensembl chr17:41,413,451...41,421,502
JBrowse link
G Slc11a2 solute carrier family 11 member 2 IEP RGD PMID:17663481 RGD:5688717 NCBI chr 7:131,503,076...131,540,246
Ensembl chr 7:131,503,081...131,540,145
JBrowse link
G Tf transferrin involved_in ISO UniProtKB:Q07891|UniProtKB:Q9UP52 (PMID:18353247) RGD PMID:18353247 NCBI chr 8:103,789,780...103,816,487
Ensembl chr 8:103,767,995...103,816,511
JBrowse link
G Tfap2a transcription factor AP-2 alpha involved_in ISS
ISO
GO_REF:0000024
(PMID:20808827)
UniProt
RGD
PMID:20808827 GO_REF:0000024 NCBI chr17:24,028,716...24,047,507
Ensembl chr17:24,024,432...24,047,507
JBrowse link
G Tfr2 transferrin receptor 2 involved_in ISO UniProtKB:P02787|UniProtKB:Q07891 (PMID:18353247) RGD PMID:18353247 NCBI chr12:19,107,673...19,124,622
Ensembl chr12:19,107,673...19,124,591
JBrowse link
cellular response to iron(II) ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpld1 glycosylphosphatidylinositol specific phospholipase D1 involved_in IDA PMID:1849823 UniProt PMID:1849823 RGD:8553426 NCBI chr17:40,084,427...40,132,035
Ensembl chr17:40,084,617...40,126,939
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta IEP RGD PMID:19608791 RGD:10045561 NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
JBrowse link
cellular response to iron(III) ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2m beta-2 microglobulin acts_upstream_of_or_within ISO MGI:1927183 (MGI:1203460|PMID:9531620) RGD PMID:9531620 MGI:1203460 NCBI chr 3:109,095,740...109,101,764
Ensembl chr 3:109,095,729...109,101,766
JBrowse link
G Ccnb1 cyclin B1 IEP ferric ammonium citrate RGD PMID:18254965 RGD:2316320 NCBI chr 2:31,912,190...31,921,163
Ensembl chr 2:31,912,193...31,921,172
JBrowse link
G Ireb2 iron responsive element binding protein 2 IEP
IDA
RGD PMID:17469137 PMID:16135072 RGD:12904039, RGD:12904046 NCBI chr 8:55,228,080...55,311,613
Ensembl chr 8:55,228,085...55,311,611
JBrowse link
G Mmp1 matrix metallopeptidase 1 IEP RGD PMID:21683124 RGD:7207286 NCBI chr 8:4,658,588...4,679,099
Ensembl chr 8:4,658,588...4,679,097
JBrowse link
G Mmp9 matrix metallopeptidase 9 IEP RGD PMID:21683124 RGD:7207286 NCBI chr 3:153,684,158...153,692,118
Ensembl chr 3:153,683,858...153,692,120
JBrowse link
cellular response to lead ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alad aminolevulinate dehydratase IEP lead, gallium RGD PMID:16566714 RGD:4144781 NCBI chr 5:75,961,993...75,972,334
Ensembl chr 5:75,961,993...75,972,474
JBrowse link
G Anxa5 annexin A5 IEP RGD PMID:11578147 RGD:10053705 NCBI chr 2:119,314,007...119,344,703
Ensembl chr 2:119,314,007...119,353,369
JBrowse link
G Atp7a ATPase copper transporting alpha IEP RGD PMID:24316150 RGD:11341684 NCBI chr  X:71,094,144...71,201,550
Ensembl chr  X:71,094,202...71,198,354
JBrowse link
G Cldn1 claudin 1 IEP RGD PMID:17439918 RGD:11344879 NCBI chr11:74,421,569...74,436,728
Ensembl chr11:74,421,569...74,436,724
JBrowse link
G Dnmt1 DNA methyltransferase 1 IEP RGD PMID:22764079 RGD:9588241 NCBI chr 8:19,440,611...19,486,659
Ensembl chr 8:19,440,611...19,486,659
JBrowse link
G Hmbs hydroxymethylbilane synthase IEP RGD PMID:16566714 RGD:4144781 NCBI chr 8:44,673,554...44,680,950
Ensembl chr 8:44,673,554...44,680,957
JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K IEP RGD PMID:33576715 RGD:155582212 NCBI chr17:6,262,936...6,275,001
Ensembl chr17:6,262,998...6,274,997
JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 IEP RGD PMID:25193092 RGD:13207490 NCBI chr13:62,164,080...62,169,770
Ensembl chr13:62,163,932...62,172,188
JBrowse link
G Ucp2 uncoupling protein 2 IEP RGD PMID:33576715 RGD:155582212 NCBI chr 1:154,839,242...154,845,612
Ensembl chr 1:154,839,209...154,845,611
JBrowse link
cellular response to lithium ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy7 adenylate cyclase 7 involved_in ISO (MGI:6162268|PMID:18205980) RGD PMID:18205980 MGI:6162268 NCBI chr19:18,740,875...18,798,924
Ensembl chr19:18,740,875...18,776,311
JBrowse link
G Calr calreticulin IEP RGD PMID:16236328 RGD:2326183 NCBI chr19:23,308,525...23,313,420
Ensembl chr19:23,308,351...23,313,414
JBrowse link
G Cdh1 cadherin 1 involved_in ISO (PMID:12937339) RGD PMID:12937339 NCBI chr19:34,492,371...34,561,775
Ensembl chr19:34,492,371...34,561,775
JBrowse link
G Cdkn1b cyclin-dependent kinase inhibitor 1B acts_upstream_of_or_within ISO (PMID:19056892) RGD PMID:19056892 NCBI chr 4:167,760,067...167,765,177
Ensembl chr 4:167,760,181...167,764,982
JBrowse link
G Cebpa CCAAT/enhancer binding protein alpha acts_upstream_of_or_within ISO (MGI:3581945|PMID:15673614) RGD PMID:15673614 MGI:3581945 NCBI chr 1:87,759,631...87,762,303
Ensembl chr 1:87,759,433...87,762,412
JBrowse link
G Ctnnb1 catenin beta 1 IEP RGD PMID:12610652 RGD:10395276 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
JBrowse link
G Fabp4 fatty acid binding protein 4 acts_upstream_of_or_within ISO (MGI:3581945|PMID:15673614) RGD PMID:15673614 MGI:3581945 NCBI chr 2:91,580,858...91,585,578
Ensembl chr 2:91,580,885...91,585,578
JBrowse link
G Fas Fas cell surface death receptor acts_upstream_of_or_within ISO MGI:1856334 (MGI:4829576|PMID:20530871) RGD PMID:20530871 MGI:4829576 NCBI chr 1:231,798,963...231,832,591
Ensembl chr 1:231,798,960...231,832,591
JBrowse link
G Gsk3a glycogen synthase kinase 3 alpha acts_upstream_of_or_within ISO (MGI:3581945|PMID:15673614) RGD PMID:15673614 MGI:3581945 NCBI chr 1:80,815,843...80,825,732
Ensembl chr 1:80,815,850...80,825,802
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta IEP RGD PMID:18932008 RGD:10045540 NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
JBrowse link
G Gsta4 glutathione S-transferase alpha 4 IEP RGD PMID:18082333 RGD:2293846 NCBI chr 8:79,066,967...79,084,193
Ensembl chr 8:79,066,934...79,084,182
JBrowse link
G Id2 inhibitor of DNA binding 2 acts_upstream_of_or_within ISO (MGI:3788965|PMID:18367557) RGD PMID:18367557 MGI:3788965 NCBI chr 6:41,740,556...41,742,393
Ensembl chr 6:41,728,946...41,744,400
JBrowse link
G Lig4 DNA ligase 4 IEP RGD PMID:19285016 RGD:2317095 NCBI chr16:79,518,393...79,526,956
Ensembl chr16:79,518,312...79,527,040
JBrowse link
G Myog myogenin acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3581945|PMID:15673614)
GO_REF:0000107
RGD
Ensembl
PMID:15673614 GO_REF:0000107 MGI:3581945 NCBI chr13:45,745,455...45,748,044
Ensembl chr13:45,745,436...45,748,039
JBrowse link
G Nfatc3 nuclear factor of activated T-cells 3 acts_upstream_of_or_within ISO (MGI:4829576|PMID:20530871) RGD PMID:20530871 MGI:4829576 NCBI chr19:33,960,643...34,035,150
Ensembl chr19:33,960,852...34,035,150
JBrowse link
G Nfatc4 nuclear factor of activated T-cells 4 acts_upstream_of_or_within ISO (MGI:4829576|PMID:20530871) RGD PMID:20530871 MGI:4829576 NCBI chr15:29,286,998...29,314,610
Ensembl chr15:29,305,535...29,314,610
JBrowse link
G Nos2 nitric oxide synthase 2 IEP RGD PMID:21994254 RGD:5508722 NCBI chr10:63,815,308...63,851,208
Ensembl chr10:63,815,308...63,851,210
JBrowse link
G Nts neurotensin IEP RGD PMID:7898306 RGD:9743905 NCBI chr 7:37,564,944...37,574,350
Ensembl chr 7:37,564,533...37,574,423
JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma acts_upstream_of_or_within ISO (MGI:3581945|PMID:15673614) RGD PMID:15673614 MGI:3581945 NCBI chr 4:148,423,102...148,548,471
Ensembl chr 4:148,423,194...148,548,468
JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3703195|PMID:17284610)
Ensembl
RGD
PMID:17284610 GO_REF:0000107 MGI:3703195 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
JBrowse link
G Slc13a2 solute carrier family 13 member 2 involved_in ISO
IDA
(PMID:10894787)
PMID:9691021
RGD PMID:10894787 PMID:9691021 RGD:153298959 NCBI chr10:63,291,813...63,319,127
Ensembl chr10:63,291,815...63,319,127
JBrowse link
G Slc13a5 solute carrier family 13 member 5 involved_in ISO
IEA
ISS
(PMID:26324167)
(MGI:6716963|PMID:26324167)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:26324167 GO_REF:0000024 GO_REF:0000107 MGI:6716963 NCBI chr10:56,866,249...56,891,189
Ensembl chr10:56,866,249...56,890,945
JBrowse link
G Slc18a1 solute carrier family 18 member A1 IEP RGD PMID:11080216 RGD:5131196 NCBI chr16:20,653,268...20,687,051
Ensembl chr16:20,653,508...20,687,051
JBrowse link
G Tph2 tryptophan hydroxylase 2 IEP RGD PMID:19840776 RGD:2317083 NCBI chr 7:50,685,694...50,789,424
Ensembl chr 7:50,685,694...50,789,424
JBrowse link
G Xrcc4 X-ray repair cross complementing 4 IEP RGD PMID:19285016 RGD:2317095 NCBI chr 2:20,948,464...21,197,705
Ensembl chr 2:20,951,200...21,197,808
JBrowse link
cellular response to magnesium ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank3 ankyrin 3 involved_in ISS
ISO
GO_REF:0000024
(MGI:5613458|PMID:23903368)
UniProt
RGD
PMID:23903368 GO_REF:0000024 MGI:5613458 NCBI chr20:18,602,267...19,225,831
Ensembl chr20:18,602,786...19,086,300
JBrowse link
G Azgp1 alpha-2-glycoprotein 1, zinc-binding IEP RGD PMID:30950934 RGD:153350153 NCBI chr12:16,930,990...16,939,333
Ensembl chr12:16,931,024...16,939,091
JBrowse link
G Fbp1 fructose-bisphosphatase 1 involved_in ISO
IEA
ISS
(PMID:10222032)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:10222032 GO_REF:0000024 GO_REF:0000107 NCBI chr17:2,207,271...2,230,076
Ensembl chr17:2,208,031...2,230,071
JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A IEP RGD PMID:19154422 RGD:2326036 NCBI chr10:5,630,684...6,043,341
Ensembl chr10:5,631,369...6,044,637
JBrowse link
G Kcna1 potassium voltage-gated channel subfamily A member 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5613458|PMID:23903368)
UniProt
RGD
PMID:23903368 GO_REF:0000024 MGI:5613458 NCBI chr 4:159,464,223...159,472,905
Ensembl chr 4:159,464,188...159,472,682
JBrowse link
G Kcnj1 potassium inwardly-rectifying channel, subfamily J, member 1 IDA RGD PMID:21030597 RGD:7244391 NCBI chr 8:30,779,883...30,808,607
Ensembl chr 8:30,753,617...30,813,796
JBrowse link
G Nos3 nitric oxide synthase 3 IEP RGD PMID:15919495 RGD:7794721 NCBI chr 4:10,793,834...10,814,170
Ensembl chr 4:10,793,834...10,814,166
JBrowse link
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 IEP RGD PMID:20350433 RGD:4892212 NCBI chr18:31,271,681...31,393,320
Ensembl chr18:31,271,681...31,393,375
JBrowse link
G Slc41a1 solute carrier family 41 member 1 involved_in ISO
ISS
UniProtKB:E1BYV3 (PMID:21696366)
(MGI:5780542|PMID:15713785)
GO_REF:0000024
RGD
ParkinsonsUK-UCL
PMID:15713785 PMID:21696366 GO_REF:0000024 MGI:5780542 NCBI chr13:43,270,792...43,291,162
Ensembl chr13:43,270,792...43,291,162
JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5529577|PMID:23973266)
Ensembl
RGD
PMID:23973266 GO_REF:0000107 MGI:5529577 NCBI chr19:34,162,337...34,245,786
Ensembl chr19:34,162,341...34,245,749
JBrowse link
cellular response to manganese ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A3galt2 alpha 1,3-galactosyltransferase 2 IDA RGD PMID:1569388 RGD:13831122 NCBI chr 5:141,101,329...141,113,760
Ensembl chr 5:141,107,983...141,115,641
JBrowse link
G App amyloid beta precursor protein IEP RGD PMID:18583042 RGD:13782134 NCBI chr11:24,019,774...24,236,584
Ensembl chr11:24,019,778...24,236,561
JBrowse link
G Atp13a2 ATPase cation transporting 13A2 involved_in ISO (PMID:22285144) RGD PMID:22285144 NCBI chr 5:153,292,722...153,312,143
Ensembl chr 5:153,292,751...153,312,139
JBrowse link
G Atp7b ATPase copper transporting beta IEP RGD PMID:24614235 RGD:11341682 NCBI chr16:69,952,286...70,024,404
Ensembl chr16:69,951,778...70,023,636
JBrowse link
G Bace1 beta-secretase 1 IEP RGD PMID:18583042 RGD:13782134 NCBI chr 8:46,142,060...46,166,268
Ensembl chr 8:46,142,116...46,165,876
JBrowse link
G Casp12 caspase 12 involved_in IEP PMID:23934647 ParkinsonsUK-UCL PMID:23934647 RGD:10047151 NCBI chr 8:2,642,296...2,669,549
Ensembl chr 8:2,642,434...2,674,037
JBrowse link
G Dbh dopamine beta-hydroxylase IEP RGD PMID:19276553 RGD:5129515 NCBI chr 3:10,488,260...10,505,245
Ensembl chr 3:10,488,260...10,505,248
JBrowse link
G Ddit3 DNA-damage inducible transcript 3 involved_in IEP PMID:23934647 ParkinsonsUK-UCL PMID:23934647 RGD:10047151 NCBI chr 7:63,115,645...63,121,203
Ensembl chr 7:63,116,380...63,121,201
JBrowse link
G Ern1 endoplasmic reticulum to nucleus signaling 1 involved_in IEP PMID:23934647 ParkinsonsUK-UCL PMID:23934647 RGD:10047151 NCBI chr10:91,326,889...91,421,201
Ensembl chr10:91,330,654...91,421,029
JBrowse link
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 IEP RGD PMID:19643132 RGD:2325970 NCBI chr 3:8,103,680...8,130,603
Ensembl chr 3:8,103,680...8,130,603
JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A IEP RGD PMID:19643132 RGD:2325970 NCBI chr10:5,630,684...6,043,341
Ensembl chr10:5,631,369...6,044,637
JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B IEP RGD PMID:19643132 RGD:2325970 NCBI chr 4:168,580,824...169,044,110
Ensembl chr 4:168,599,546...169,042,279
JBrowse link
G Hsp90b1 heat shock protein 90 beta family member 1 involved_in IEP PMID:23934647 ParkinsonsUK-UCL PMID:23934647 RGD:10047151 NCBI chr 7:21,110,431...21,124,762
Ensembl chr 7:21,110,457...21,124,788
JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 involved_in IEP PMID:23934647 ParkinsonsUK-UCL PMID:23934647 RGD:10047151 NCBI chr 3:18,055,507...18,059,969
Ensembl chr 3:18,055,405...18,059,891
JBrowse link
G Ireb2 iron responsive element binding protein 2 IEP
IDA
RGD PMID:17469137 PMID:16568477 RGD:12904039, RGD:12904041 NCBI chr 8:55,228,080...55,311,613
Ensembl chr 8:55,228,085...55,311,611
JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 involved_in ISO (PMID:23628791) RGD PMID:23628791 NCBI chr 7:122,826,712...122,987,711
Ensembl chr 7:122,826,696...122,987,703
JBrowse link
G Mfn2 mitofusin 2 IEP RGD PMID:28232070 RGD:12910738 NCBI chr 5:158,304,285...158,335,502
Ensembl chr 5:158,304,287...158,335,342
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase IEP RGD PMID:19781568 RGD:5130971 NCBI chr 1:48,688,651...49,882,520
Ensembl chr 1:48,690,556...49,882,555
JBrowse link
G Th tyrosine hydroxylase IEP RGD PMID:19781568 RGD:5130971 NCBI chr 1:198,071,500...198,078,832
Ensembl chr 1:198,071,503...198,109,767
JBrowse link
cellular response to mercury ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp1 aquaporin 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:12172703), (PMID:12745312), (PMID:7491270), (PMID:8584435), (PMID:9321919)
UniProt
RGD
PMID:7491270 PMID:8584435 PMID:9321919 PMID:12172703 PMID:12745312 GO_REF:0000024 NCBI chr 4:84,482,512...84,494,690
Ensembl chr 4:84,482,512...84,494,690
JBrowse link
G Aqp2 aquaporin 2 involved_in ISO
IEA
(PMID:8584435)
GO_REF:0000107
RGD
Ensembl
PMID:8584435 GO_REF:0000107 NCBI chr 7:130,711,433...130,716,468
Ensembl chr 7:130,711,413...130,716,468
JBrowse link
G Fn1 fibronectin 1 IDA RGD PMID:11768240 RGD:729934 NCBI chr 9:73,196,044...73,264,695
Ensembl chr 9:73,196,044...73,264,678
JBrowse link
G Hsd3b1 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 IEP RGD PMID:2253967 RGD:4889587 NCBI chr 2:186,169,864...186,175,984
Ensembl chr 2:186,169,863...186,175,999
JBrowse link
G Il4 interleukin 4 IEP RGD PMID:19604304 PMID:7657819 RGD:2317279, RGD:2317674 NCBI chr10:37,771,203...37,776,750
Ensembl chr10:37,771,203...37,776,750
JBrowse link
G Slc1a1 solute carrier family 1 member 1 acts_upstream_of_or_within ISO (MGI:6479661|PMID:15635608) RGD PMID:15635608 MGI:6479661 NCBI chr 1:226,549,932...226,631,925
Ensembl chr 1:226,549,842...226,630,402
JBrowse link
G Ube2d3 ubiquitin-conjugating enzyme E2D 3 IEP RGD PMID:24212999 RGD:13830869 NCBI chr 2:223,868,397...223,899,606
Ensembl chr 2:223,868,730...223,898,081
JBrowse link
cellular response to potassium ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdnf brain-derived neurotrophic factor IEP RGD PMID:25424568 RGD:11060597 NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615
JBrowse link
G Cacna1h calcium voltage-gated channel subunit alpha1 H involved_in ISO (PMID:19342457) RGD PMID:19342457 NCBI chr10:14,390,104...14,448,204
Ensembl chr10:14,390,113...14,448,376
JBrowse link
G Carf calcium responsive transcription factor involved_in ISO (PMID:22174809) RGD PMID:22174809 NCBI chr 9:61,502,368...61,552,433
Ensembl chr 9:61,506,956...61,550,462
JBrowse link
G Crhbp corticotropin releasing hormone binding protein involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:21624661)
UniProt
Ensembl
RGD
PMID:21624661 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:26,692,403...26,704,710
Ensembl chr 2:26,692,403...26,704,710
JBrowse link
G Cyp11b2 cytochrome P450, family 11, subfamily b, polypeptide 2 involved_in ISO (PMID:19342457) RGD PMID:19342457 NCBI chr 7:106,838,590...106,845,004
Ensembl chr 7:106,838,590...106,845,004
JBrowse link
G Cyp11b3 cytochrome P450, family 11, subfamily b, polypeptide 3 involved_in ISO (PMID:19342457) RGD PMID:19342457 NCBI chr 7:106,808,559...106,814,048
Ensembl chr 7:106,808,559...106,814,048
JBrowse link
G Dlg2 discs large MAGUK scaffold protein 2 involved_in ISO (MGI:5703671|PMID:26609151) RGD PMID:26609151 MGI:5703671 NCBI chr 1:144,451,653...146,503,949
Ensembl chr 1:144,451,472...146,499,475
JBrowse link
G Dlg4 discs large MAGUK scaffold protein 4 involved_in ISO (MGI:5703671|PMID:26609151) RGD PMID:26609151 MGI:5703671 NCBI chr10:54,740,700...54,769,097
Ensembl chr10:54,739,470...54,767,153
JBrowse link
G Fmr1 fragile X messenger ribonucleoprotein 1 IEP RGD PMID:15028757 RGD:1300188 NCBI chr  X:147,240,239...147,278,057
Ensembl chr  X:147,240,301...147,278,050
JBrowse link
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 IDA RGD PMID:17298175 RGD:10045993 NCBI chr 7:134,375,318...134,381,610
Ensembl chr 7:134,375,150...134,381,609
JBrowse link
G Hsf1 heat shock transcription factor 1 IEP RGD PMID:24478344 RGD:10402566 NCBI chr 7:108,196,040...108,223,011
Ensembl chr 7:108,196,056...108,223,011
JBrowse link
G Kcnj10 potassium inwardly-rectifying channel, subfamily J, member 10 involved_in ISO MGI:3761690 (MGI:6451360|PMID:31736353) RGD PMID:31736353 MGI:6451360 NCBI chr13:84,802,026...84,835,383
Ensembl chr13:84,802,009...84,835,461
JBrowse link
G Mecp2 methyl CpG binding protein 2 IDA RGD PMID:14593183 RGD:12790707 NCBI chr  X:151,781,177...151,844,687
Ensembl chr  X:151,789,930...151,844,689
JBrowse link
G Mylk myosin light chain kinase acts_upstream_of_or_within ISO (MGI:3805620|PMID:18524939) RGD PMID:18524939 MGI:3805620 NCBI chr11:65,783,008...66,030,239
Ensembl chr11:65,783,008...66,030,261
JBrowse link
G Nek7 NIMA-related kinase 7 involved_in ISO
IEA
ISS
(MGI:5751332|PMID:26814970)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:26814970 GO_REF:0000024 GO_REF:0000107 MGI:5751332 NCBI chr13:50,022,212...50,149,374
Ensembl chr13:50,022,218...50,149,296
JBrowse link
G Nptx1 neuronal pentraxin 1 IDA RGD PMID:22279230 RGD:6903322 NCBI chr10:104,811,107...104,820,358
Ensembl chr10:104,811,403...104,820,367
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha IEP RGD PMID:17870059 RGD:10059655 NCBI chr14:58,860,752...59,516,525
Ensembl chr14:58,861,144...59,512,656
JBrowse link
G Serpine1 serpin family E member 1 IEP RGD PMID:21596853 RGD:8547918 NCBI chr12:19,601,272...19,611,657
Ensembl chr12:19,601,272...19,611,657
JBrowse link
G Slc12a2 solute carrier family 12 member 2 involved_in ISO (MGI:6392919|PMID:11940530) RGD PMID:11940530 MGI:6392919 NCBI chr18:51,348,282...51,416,448
Ensembl chr18:51,348,302...51,416,440
JBrowse link
G Sod1 superoxide dismutase 1 IEP RGD PMID:17403136 RGD:8657024 NCBI chr11:29,456,673...29,462,249
Ensembl chr11:29,456,558...29,462,249
JBrowse link
G Stk39 serine threonine kinase 39 involved_in ISO (MGI:6451360|PMID:31736353) RGD PMID:31736353 MGI:6451360 NCBI chr 3:52,913,583...53,179,060
Ensembl chr 3:52,913,585...53,179,060
JBrowse link
cellular response to zinc ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Creb1 cAMP responsive element binding protein 1 acts_upstream_of_or_within ISO (MGI:5492261|PMID:23716681) RGD PMID:23716681 MGI:5492261 NCBI chr 9:65,903,511...65,972,562
Ensembl chr 9:65,903,547...65,970,816
JBrowse link
G Gabrb3 gamma-aminobutyric acid type A receptor subunit beta 3 acts_upstream_of_or_within ISO (MGI:6478074|PMID:12183328) RGD PMID:12183328 MGI:6478074 NCBI chr 1:108,467,047...108,702,522
Ensembl chr 1:108,296,124...108,698,961
JBrowse link
G Glra1 glycine receptor, alpha 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:16144831)
UniProt
RGD
PMID:16144831 GO_REF:0000024 NCBI chr10:39,625,853...39,727,897
Ensembl chr10:39,629,459...39,727,162
JBrowse link
G Glra2 glycine receptor, alpha 2 involved_in ISO
IEA
(PMID:23895467)
GO_REF:0000107
RGD
Ensembl
PMID:23895467 GO_REF:0000107 NCBI chr  X:29,020,377...29,241,666
Ensembl chr  X:29,020,557...29,241,666
JBrowse link
G Glra3 glycine receptor, alpha 3 involved_in IDA PMID:23895467 UniProt PMID:23895467 RGD:11035333 NCBI chr16:34,205,431...34,848,332
Ensembl chr16:34,204,811...34,848,753
JBrowse link
G Gpr39 G protein-coupled receptor 39 acts_upstream_of_or_within ISO MGI:3701833 (MGI:5464224|PMID:23133519), (MGI:5707553|PMID:26375174) RGD PMID:23133519 PMID:26375174 MGI:5464224 MGI:5707553 NCBI chr13:37,115,258...37,327,312
Ensembl chr13:37,115,102...37,328,267
JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A IMP RGD PMID:19240037 RGD:2326029 NCBI chr10:5,630,684...6,043,341
Ensembl chr10:5,631,369...6,044,637
JBrowse link
G Hvcn1 hydrogen voltage-gated channel 1 involved_in ISO (PMID:22020278) RGD PMID:22020278 NCBI chr12:34,341,673...34,370,010
Ensembl chr12:34,335,190...34,370,141
JBrowse link
G Kcnk3 potassium two pore domain channel subfamily K member 3 IEP RGD PMID:9437008 RGD:61647 NCBI chr 6:25,761,487...25,799,153
Ensembl chr 6:25,763,228...25,799,153
JBrowse link
G Mt1 metallothionein 1 involved_in
acts_upstream_of_or_within
IBA
ISO
ISS
PMID:21873635
(MGI:3820854|PMID:18605988)
GO_REF:0000024
(PMID:11168427)
RGD
UniProt
PMID:11168427 PMID:18605988 PMID:21873635 GO_REF:0000024 MGI:3820854, RGD:13792537 NCBI chr19:10,826,032...10,827,048
Ensembl chr19:10,826,032...10,827,049
JBrowse link
G Mt1-ps3 metallothionein 1, pseudogene 3 involved_in ISO (PMID:11168427), (PMID:15735762), (PMID:3403543), (PMID:7559655), (PMID:8119276)
(PMID:11168427), (PMID:8119276)
RGD PMID:3403543 PMID:7559655 PMID:8119276 PMID:11168427 PMID:15735762 NCBI chr17:74,786,652...74,787,040
Ensembl chr17:74,786,654...74,787,135
JBrowse link
G Mt1m metallothionein 1M involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:3,159,023...3,159,401
Ensembl chr 5:119,728,811...119,730,073
Ensembl chr19:119,728,811...119,730,073
JBrowse link
G Mt2A metallothionein 2A involved_in ISO
ISS
IBA
(PMID:11168427)
GO_REF:0000024
PMID:21873635
RGD
UniProt
PMID:11168427 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr19:10,832,009...10,832,783
Ensembl chr19:10,832,002...10,832,784
JBrowse link
G Mt3 metallothionein 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:10,848,754...10,850,158
Ensembl chr19:10,848,755...10,850,158
JBrowse link
G Mt4 metallothionein 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:10,863,813...10,865,909
Ensembl chr19:10,863,813...10,865,909
JBrowse link
G Mtf1 metal-regulatory transcription factor 1 involved_in ISO (MGI:5577232|PMID:24529376) RGD PMID:24529376 MGI:5577232 NCBI chr 5:137,062,319...137,107,136
Ensembl chr 5:137,062,376...137,107,136
JBrowse link
G P2rx4 purinergic receptor P2X 4 involved_in IDA PMID:8551329 UniProt PMID:8551329 RGD:61682 NCBI chr12:33,844,609...33,862,265
Ensembl chr12:33,844,396...33,862,253
JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 IEP RGD PMID:23582235 RGD:10414068 NCBI chr13:92,307,593...92,339,406
Ensembl chr13:92,307,586...92,339,404
JBrowse link
G Tspo translocator protein IEP RGD PMID:18709649 RGD:2317141 NCBI chr 7:114,720,188...114,730,450
Ensembl chr 7:114,720,188...114,730,450
JBrowse link
positive regulation of transcription from RNA polymerase II promoter in response to calcium ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Carf calcium responsive transcription factor involved_in ISO
IEA
(PMID:11832226), (PMID:22174809)
GO_REF:0000002
RGD
InterPro
PMID:11832226 PMID:22174809 GO_REF:0000002 NCBI chr 9:61,502,368...61,552,433
Ensembl chr 9:61,506,956...61,550,462
JBrowse link
regulation of cellular response to manganese ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc30a10 solute carrier family 30, member 10 involved_in ISO (PMID:25319704) RGD PMID:25319704 NCBI chr13:96,998,143...97,048,076
Ensembl chr13:96,998,143...97,009,103
JBrowse link
regulation of transcription from RNA polymerase II promoter in response to iron term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmox1 heme oxygenase 1 acts_upstream_of_or_within ISO (MGI:5527134|PMID:23395172) RGD PMID:23395172 MGI:5527134 NCBI chr19:13,466,287...13,474,082
Ensembl chr19:13,467,244...13,474,079
JBrowse link
G Hrg histidine-rich glycoprotein acts_upstream_of_or_within ISO (MGI:5527134|PMID:23395172) RGD PMID:23395172 MGI:5527134 NCBI chr11:78,054,488...78,069,402
Ensembl chr11:78,054,498...78,069,389
JBrowse link
G Slc40a1 solute carrier family 40 member 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5527134|PMID:23395172)
GO_REF:0000107
RGD
Ensembl
PMID:23395172 GO_REF:0000107 MGI:5527134 NCBI chr 9:48,033,526...48,053,876
Ensembl chr 9:48,033,526...48,051,481
JBrowse link
response to manganese-induced endoplasmic reticulum stress term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf4 activating transcription factor 4 involved_in IEP PMID:23934647 ParkinsonsUK-UCL PMID:23934647 RGD:10047151 NCBI chr 7:111,804,135...111,806,457
Ensembl chr 7:111,804,183...111,806,446
JBrowse link
G Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 involved_in IEP PMID:23934647 ParkinsonsUK-UCL PMID:23934647 RGD:10047151 NCBI chr 4:102,805,495...102,866,914
Ensembl chr 4:102,805,510...102,866,911
JBrowse link
G Eif2s1 eukaryotic translation initiation factor 2 subunit alpha involved_in IEP PMID:23934647 ParkinsonsUK-UCL PMID:23934647 RGD:10047151 NCBI chr 6:97,672,829...97,697,499
Ensembl chr 6:97,672,766...97,706,225
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19876
    response to stimulus 10557
      response to chemical 6093
        response to inorganic substance 878
          response to metal ion 546
            cellular response to metal ion 263
              cellular response to aluminum ion 2
              cellular response to cadmium ion + 41
              cellular response to calcium ion + 95
              cellular response to cesium ion 0
              cellular response to cobalt ion + 6
              cellular response to copper ion + 25
              cellular response to iron ion + 17
              cellular response to lead ion 9
              cellular response to lithium ion 25
              cellular response to magnesium ion 10
              cellular response to manganese ion + 23
              cellular response to mercury ion 7
              cellular response to nickel ion 0
              cellular response to platinum ion 0
              cellular response to potassium ion + 21
              cellular response to selenium ion 0
              cellular response to silver ion 0
              cellular response to tellurium ion 0
              cellular response to zinc ion 19
paths to the root