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ONTOLOGY REPORT - ANNOTATIONS


Term:cellular response to arsenic-containing substance
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Accession:GO:0071243 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an arsenic stimulus from compounds containing arsenic, including arsenates, arsenites, and arsenides.
Synonyms:exact_synonym: cellular response to arsenic



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cellular response to arsenic-containing substance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CPEB2 cytoplasmic polyadenylation element binding protein 2 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr 4:15,002,481...15,070,151
Ensembl chr 4:15,002,481...15,070,153
JBrowse link
G DDX3X DEAD-box helicase 3 X-linked involved_in IDA (PMID:21883093) UniProt
UniProt
PMID:21883093 NCBI chr  X:41,333,308...41,364,472
Ensembl chr  X:41,333,348...41,364,472
JBrowse link
G GSTO1 glutathione S-transferase omega 1 involved_in IDA (PMID:11511179) UniProt
UniProt
PMID:11511179 NCBI chr10:104,254,173...104,267,455
Ensembl chr10:104,235,356...104,267,459
JBrowse link
G GSTO2 glutathione S-transferase omega 2 involved_in IDA (PMID:15970797) UniProt
UniProt
PMID:15970797 NCBI chr10:104,269,184...104,304,950
Ensembl chr10:104,268,873...104,304,950
JBrowse link
G HMBS hydroxymethylbilane synthase ISO RGD PMID:10416273 RGD:2303399 NCBI chr11:119,084,881...119,093,549
Ensembl chr11:119,084,866...119,093,834
JBrowse link
G HMOX1 heme oxygenase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2387878|PMID:12220541) Ensembl
MGI
Ensembl
PMID:12220541 GO_REF:0000107 MGI:2387878 NCBI chr22:35,381,096...35,394,207
Ensembl chr22:35,380,361...35,394,214
JBrowse link
G MET MET proto-oncogene, receptor tyrosine kinase ISO RGD PMID:16876216 RGD:2317518 NCBI chr 7:116,672,196...116,798,377
Ensembl chr 7:116,672,196...116,798,377
JBrowse link
G MKNK2 MAPK interacting serine/threonine kinase 2 involved_in IDA (PMID:18299328) UniProt
UniProt
PMID:18299328 NCBI chr19:2,037,471...2,051,244
Ensembl chr19:2,037,465...2,051,244
JBrowse link
G PPIF peptidylprolyl isomerase F involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr10:79,347,469...79,355,334
Ensembl chr10:79,347,469...79,355,334
JBrowse link
G RNF4 ring finger protein 4 ISO RGD PMID:20943951 RGD:8553289 NCBI chr 4:2,469,106...2,515,857
Ensembl chr 4:2,462,220...2,625,320
JBrowse link
G UROD uroporphyrinogen decarboxylase ISO RGD PMID:10416273 RGD:2303399 NCBI chr 1:45,012,254...45,015,575
Ensembl chr 1:45,010,950...45,015,575
JBrowse link
G UROS uroporphyrinogen III synthase involved_in IEA
ISO
Ensembl
Ensembl
RGD
PMID:10416273 GO_REF:0000107 RGD:2303399 NCBI chr10:125,784,980...125,823,258
Ensembl chr10:125,784,980...125,823,258
JBrowse link
G ZFAND2A zinc finger AN1-type containing 2A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3663213|PMID:16973439) MGI
Ensembl
Ensembl
PMID:16973439 GO_REF:0000107 MGI:3663213 NCBI chr 7:1,148,850...1,160,196
Ensembl chr 7:1,152,071...1,160,759
JBrowse link
cellular response to arsenite ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DHX36 DEAH-box helicase 36 involved_in IDA (PMID:18854321) UniProt
UniProt
PMID:18854321 NCBI chr 3:154,272,546...154,324,487
Ensembl chr 3:154,272,546...154,324,487
JBrowse link
G VCP valosin containing protein involved_in IMP (PMID:29804830) UniProt
UniProt
PMID:29804830 NCBI chr 9:35,056,064...35,072,625
Ensembl chr 9:35,053,928...35,072,668
JBrowse link
G ZFAND1 zinc finger AN1-type containing 1 involved_in IMP (PMID:29804830) UniProt
UniProt
PMID:29804830 NCBI chr 8:81,701,331...81,721,304
Ensembl chr 8:81,701,334...81,732,903
JBrowse link
cellular response to arsenite(3-) term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MYC MYC proto-oncogene, bHLH transcription factor involved_in ISO
IEA
RGD
Ensembl
PMID:9848127 GO_REF:0000107 RGD:10059616 NCBI chr 8:127,735,434...127,742,951
Ensembl chr 8:127,735,434...127,742,951
JBrowse link
G SLC38A2 solute carrier family 38 member 2 involved_in IMP (PMID:22215663) ARUK-UCL
ARUK-UCL
PMID:22215663 NCBI chr12:46,358,188...46,372,773
Ensembl chr12:46,358,188...46,372,773
JBrowse link
G UBE2D4 ubiquitin conjugating enzyme E2 D4 (putative) ISO RGD PMID:24212999 RGD:13830869 NCBI chr 7:43,926,436...43,956,136
Ensembl chr 7:43,926,436...43,956,136
JBrowse link
cellular response to sodium arsenite term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DAXX death domain associated protein involved_in IDA (PMID:15016915) UniProt
UniProt
PMID:15016915 NCBI chr 6:33,318,558...33,322,959
Ensembl chr 6:33,318,558...33,323,016
JBrowse link
G HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 involved_in IDA (PMID:27694260) UniProt
UniProt
PMID:27694260 NCBI chr12:54,280,726...54,287,087
Ensembl chr12:54,280,193...54,287,088
JBrowse link
G HSF1 heat shock transcription factor 1 involved_in IDA (PMID:15016915) UniProt
UniProt
PMID:15016915 NCBI chr 8:144,291,604...144,314,720
Ensembl chr 8:144,291,591...144,314,720
JBrowse link
G MAPK13 mitogen-activated protein kinase 13 involved_in IDA (PMID:9218798) UniProt
UniProt
PMID:9218798 NCBI chr 6:36,130,513...36,144,521
Ensembl chr 6:36,127,809...36,144,524
JBrowse link
G ZC3H12A zinc finger CCCH-type containing 12A involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 1:37,474,580...37,484,377
Ensembl chr 1:37,474,580...37,484,377
JBrowse link
positive regulation of transcription from RNA polymerase II promoter in response to arsenic-containing substance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF4 activating transcription factor 4 involved_in TAS (PMID:14685163) ParkinsonsUK-UCL
ParkinsonsUK-UCL
PMID:14685163 NCBI chr22:39,520,559...39,522,686
Ensembl chr22:39,519,695...39,522,683
JBrowse link
regulation of transcription from RNA polymerase II promoter in response to arsenic-containing substance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF3 activating transcription factor 3 involved_in TAS (PMID:14685163) ParkinsonsUK-UCL
ParkinsonsUK-UCL
PMID:14685163 NCBI chr 1:212,565,407...212,620,777
Ensembl chr 1:212,565,334...212,620,777
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19665
    response to stimulus 10144
      response to chemical 5546
        response to arsenic-containing substance 50
          cellular response to arsenic-containing substance 26
            cellular response to arsenite ion + 6
            cellular response to sodium arsenite 5
            regulation of transcription from RNA polymerase II promoter in response to arsenic-containing substance + 2
paths to the root