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ONTOLOGY REPORT - ANNOTATIONS


Term:cellular response to inorganic substance
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Accession:GO:0071241 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an inorganic substance stimulus.



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cellular response to inorganic substance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy10 adenylate cyclase 10 involved_in ISO
ISS
(PMID:12609998)
GO_REF:0000024
RGD
UniProt
PMID:12609998 GO_REF:0000024 NCBI chr13:77,747,752...77,833,952
Ensembl chr13:77,768,468...77,833,951
JBrowse link
G Aqp1 aquaporin 1 involved_in ISO
ISS
(PMID:14561230)
GO_REF:0000024
RGD
UniProt
PMID:14561230 GO_REF:0000024 NCBI chr 4:84,482,512...84,494,690
Ensembl chr 4:84,482,512...84,494,690
JBrowse link
G Gpld1 glycosylphosphatidylinositol specific phospholipase D1 involved_in IDA PMID:1849823 UniProt PMID:1849823 RGD:8553426 NCBI chr17:40,084,427...40,132,035
Ensembl chr17:40,084,617...40,126,939
JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase IEP asbestos RGD PMID:12839939 RGD:2317528 NCBI chr 4:45,790,456...45,898,139
Ensembl chr 4:45,790,791...45,897,876
JBrowse link
G Mir100 microRNA 100 acts_upstream_of_or_within ISO (MGI:5305371|PMID:21993888) RGD PMID:21993888 MGI:5305371 NCBI chr 8:41,901,225...41,901,304
Ensembl chr 8:41,901,225...41,901,304
JBrowse link
G Mir106a microRNA 106a acts_upstream_of_or_within ISO (MGI:5305371|PMID:21993888) RGD PMID:21993888 MGI:5305371 NCBI chr  X:132,422,584...132,422,661
Ensembl chr  X:132,422,584...132,422,661
JBrowse link
G Mir106b microRNA 106b acts_upstream_of_or_within ISO (MGI:5305371|PMID:21993888) RGD PMID:21993888 MGI:5305371 NCBI chr12:17,043,344...17,043,425
Ensembl chr12:17,043,344...17,043,425
JBrowse link
G Mir10a microRNA 10a acts_upstream_of_or_within ISO (MGI:5305371|PMID:21993888) RGD PMID:21993888 MGI:5305371 NCBI chr10:81,283,171...81,283,280
Ensembl chr10:81,283,171...81,283,280
JBrowse link
G Mir10b microRNA 10b acts_upstream_of_or_within ISO (MGI:5305371|PMID:21993888) RGD PMID:21993888 MGI:5305371 NCBI chr 3:59,628,438...59,628,546
Ensembl chr 3:59,628,438...59,628,546
JBrowse link
G Mir1224 microRNA 1224 acts_upstream_of_or_within ISO (MGI:5305371|PMID:21993888) RGD PMID:21993888 MGI:5305371 NCBI chr11:80,306,902...80,306,986
Ensembl chr11:80,306,902...80,306,986
JBrowse link
G Mir125b1 microRNA 125b-1 acts_upstream_of_or_within ISO (MGI:5305371|PMID:21993888) RGD PMID:21993888 MGI:5305371 NCBI chr 8:41,952,966...41,953,052
Ensembl chr 8:41,952,966...41,953,052
JBrowse link
G Mir125b2 microRNA 125b-2 acts_upstream_of_or_within ISO (MGI:5305371|PMID:21993888) RGD PMID:21993888 MGI:5305371 NCBI chr11:16,245,620...16,245,707 JBrowse link
G Mir130a microRNA 130a acts_upstream_of_or_within ISO (MGI:5305371|PMID:21993888) RGD PMID:21993888 MGI:5305371 NCBI chr 3:69,822,542...69,822,629
Ensembl chr 3:69,822,542...69,822,629
JBrowse link
G Mir132 microRNA 132 acts_upstream_of_or_within ISO (MGI:5305371|PMID:21993888) RGD PMID:21993888 MGI:5305371 NCBI chr10:60,023,696...60,023,796
Ensembl chr10:60,023,696...60,023,796
JBrowse link
G Mir17 microRNA 17 acts_upstream_of_or_within ISO (MGI:5305371|PMID:21993888) RGD PMID:21993888 MGI:5305371 NCBI chr15:92,180,629...92,180,712
Ensembl chr15:92,180,629...92,180,712
JBrowse link
G Mir181b1 microRNA 181b-1 acts_upstream_of_or_within ISO (MGI:5305371|PMID:21993888) RGD PMID:21993888 MGI:5305371 NCBI chr13:49,485,688...49,485,797
Ensembl chr13:49,485,688...49,485,797
JBrowse link
G Mir181b2 microRNA 181b-2 acts_upstream_of_or_within ISO (MGI:5305371|PMID:21993888) RGD PMID:21993888 MGI:5305371 NCBI chr 3:22,616,948...22,617,035
Ensembl chr 3:22,616,948...22,617,035
JBrowse link
G Mir18a microRNA 18a acts_upstream_of_or_within ISO (MGI:5305371|PMID:21993888) RGD PMID:21993888 MGI:5305371 NCBI chr15:92,180,765...92,180,860
Ensembl chr15:92,180,765...92,180,860
JBrowse link
G Mir196a microRNA 196a acts_upstream_of_or_within ISO (MGI:5305371|PMID:21993888) RGD PMID:21993888 MGI:5305371 NCBI chr 7:134,110,400...134,110,509
Ensembl chr 7:134,110,400...134,110,509
JBrowse link
G Mir196c microRNA 196c acts_upstream_of_or_within ISO (MGI:5305371|PMID:21993888) RGD PMID:21993888 MGI:5305371 NCBI chr10:81,231,006...81,231,085
Ensembl chr10:81,231,006...81,231,085
JBrowse link
G Mir199a2 microRNA 199a-2 acts_upstream_of_or_within ISO (MGI:5305371|PMID:21993888) RGD PMID:21993888 MGI:5305371 NCBI chr13:74,582,954...74,583,063
Ensembl chr13:74,582,954...74,583,063
JBrowse link
G Mir20a microRNA 20a acts_upstream_of_or_within ISO (MGI:5305371|PMID:21993888) RGD PMID:21993888 MGI:5305371 NCBI chr15:92,181,084...92,181,168
Ensembl chr15:92,181,084...92,181,168
JBrowse link
G Mir20b microRNA 20b acts_upstream_of_or_within ISO (MGI:5305371|PMID:21993888) RGD PMID:21993888 MGI:5305371 NCBI chr  X:132,422,211...132,422,282
Ensembl chr  X:132,422,211...132,422,282
JBrowse link
G Mir214 microRNA 214 acts_upstream_of_or_within ISO (MGI:5305371|PMID:21993888) RGD PMID:21993888 MGI:5305371 NCBI chr13:74,588,374...74,588,481
Ensembl chr13:74,588,372...74,588,481
JBrowse link
G Mir221 microRNA 221 acts_upstream_of_or_within ISO (MGI:5305371|PMID:21993888) RGD PMID:21993888 MGI:5305371 NCBI chr  X:3,429,465...3,429,573
Ensembl chr  X:3,429,465...3,429,573
JBrowse link
G Mir222 microRNA 222 acts_upstream_of_or_within ISO (MGI:5305371|PMID:21993888) RGD PMID:21993888 MGI:5305371 NCBI chr  X:3,428,904...3,429,006
Ensembl chr  X:3,428,904...3,429,006
JBrowse link
G Mir25 microRNA 25 acts_upstream_of_or_within ISO (MGI:5305371|PMID:21993888) RGD PMID:21993888 MGI:5305371 NCBI chr12:17,042,932...17,043,015
Ensembl chr12:17,042,932...17,043,015
JBrowse link
G Mir27b microRNA 27b acts_upstream_of_or_within ISO (MGI:5305371|PMID:21993888) RGD PMID:21993888 MGI:5305371 NCBI chr17:1,813,427...1,813,523
Ensembl chr17:1,813,426...1,813,529
JBrowse link
G Mir30a microRNA 30a acts_upstream_of_or_within ISO (MGI:5305371|PMID:21993888) RGD PMID:21993888 MGI:5305371 NCBI chr 9:25,737,600...25,737,670
Ensembl chr 9:25,737,600...25,737,670
JBrowse link
G Mir30c1 microRNA 30c-1 acts_upstream_of_or_within ISO (MGI:5305371|PMID:21993888) RGD PMID:21993888 MGI:5305371 NCBI chr 5:134,349,237...134,349,325
Ensembl chr 5:134,349,237...134,349,325
JBrowse link
G Mir30c2 microRNA 30c-2 acts_upstream_of_or_within ISO (MGI:5305371|PMID:21993888) RGD PMID:21993888 MGI:5305371 NCBI chr 9:25,757,342...25,757,425
Ensembl chr 9:25,757,342...25,757,425
JBrowse link
G Mir30e microRNA 30e acts_upstream_of_or_within ISO (MGI:5305371|PMID:21993888) RGD PMID:21993888 MGI:5305371 NCBI chr 5:134,352,232...134,352,323
Ensembl chr 5:134,352,232...134,352,323
JBrowse link
G Mir31 microRNA 31 acts_upstream_of_or_within ISO (MGI:5305371|PMID:21993888) RGD PMID:21993888 MGI:5305371 NCBI chr 5:103,599,038...103,599,143 JBrowse link
G Mir322 microRNA 322 acts_upstream_of_or_within ISO (MGI:5305371|PMID:21993888) RGD PMID:21993888 MGI:5305371 NCBI chr  X:132,806,594...132,806,688
Ensembl chr  X:132,806,594...132,806,688
JBrowse link
G Mir331 microRNA 331 acts_upstream_of_or_within ISO (MGI:5305371|PMID:21993888) RGD PMID:21993888 MGI:5305371 NCBI chr 7:28,527,390...28,527,485
Ensembl chr 7:28,527,390...28,527,485
JBrowse link
G Mir342 microRNA 342 acts_upstream_of_or_within ISO (MGI:5305371|PMID:21993888) RGD PMID:21993888 MGI:5305371 NCBI chr 6:127,565,269...127,565,367
Ensembl chr 6:127,565,269...127,565,367
JBrowse link
G Mir34c microRNA 34c acts_upstream_of_or_within ISO (MGI:5305371|PMID:21993888) RGD PMID:21993888 MGI:5305371 NCBI chr 8:51,409,726...51,409,802
Ensembl chr 8:51,409,726...51,409,802
JBrowse link
G Mir615 microRNA 615 acts_upstream_of_or_within ISO (MGI:5305371|PMID:21993888) RGD PMID:21993888 MGI:5305371 NCBI chr 7:134,151,887...134,151,978
Ensembl chr 7:134,151,887...134,151,978
JBrowse link
G Mir652 microRNA 652 acts_upstream_of_or_within ISO (MGI:5305371|PMID:21993888) RGD PMID:21993888 MGI:5305371 NCBI chr  X:106,343,293...106,343,373
Ensembl chr  X:106,343,293...106,343,373
JBrowse link
G Mir7-1 microRNA 7-1 acts_upstream_of_or_within ISO (MGI:5305371|PMID:21993888) RGD PMID:21993888 MGI:5305371 NCBI chr17:6,273,264...6,273,360
Ensembl chr17:6,273,264...6,273,360
JBrowse link
G Mir93 microRNA 93 acts_upstream_of_or_within ISO (MGI:5305371|PMID:21993888) RGD PMID:21993888 MGI:5305371 NCBI chr12:17,043,135...17,043,221
Ensembl chr12:17,043,135...17,043,221
JBrowse link
G Mirlet7g microRNA let-7g acts_upstream_of_or_within ISO (MGI:5305371|PMID:21993888) RGD PMID:21993888 MGI:5305371 NCBI chr 8:106,822,293...106,822,380
Ensembl chr 8:106,822,280...106,822,388
JBrowse link
G Ncam1 neural cell adhesion molecule 1 IEP RGD PMID:17537562 RGD:2326012 NCBI chr 8:49,865,629...50,165,687
Ensembl chr 8:49,865,633...50,166,014
JBrowse link
G Rpl5 ribosomal protein L5 IEP sodium fluoride RGD PMID:12930674 RGD:2316858 NCBI chr14:1,843,856...1,850,301
Ensembl chr14:1,843,770...1,850,290
JBrowse link
G Slc12a3 solute carrier family 12 member 3 involved_in ISO
IEA
(MGI:5435618|PMID:22846565)
GO_REF:0000107
RGD
Ensembl
PMID:22846565 GO_REF:0000107 MGI:5435618 NCBI chr19:10,630,649...10,679,250
Ensembl chr19:10,631,393...10,669,091
JBrowse link
cell motility in response to calcium ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Spag16 sperm associated antigen 16 acts_upstream_of_or_within ISO MGI:3606979 (MGI:4452319|PMID:20042536) RGD PMID:20042536 MGI:4452319 NCBI chr 9:71,333,005...72,252,772
Ensembl chr 9:71,332,992...72,252,708
JBrowse link
cellular detoxification of cadmium ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb6 ATP binding cassette subfamily B member 6 involved_in ISS
ISO
GO_REF:0000024
(PMID:31053883)
UniProt
RGD
PMID:31053883 GO_REF:0000024 NCBI chr 9:76,668,554...76,677,263
Ensembl chr 9:76,668,554...76,676,924
JBrowse link
cellular response to aluminum ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Becn1 beclin 1 IEP RGD PMID:22138567 RGD:6483058 NCBI chr10:86,231,387...86,246,742
Ensembl chr10:86,231,388...86,246,742
JBrowse link
G Entpd1 ectonucleoside triphosphate diphosphohydrolase 1 IEP RGD PMID:20832780 RGD:9685488 NCBI chr 1:239,425,515...239,552,323
Ensembl chr 1:239,425,430...239,552,317
JBrowse link
cellular response to azide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aoc1 amine oxidase, copper containing 1 involved_in ISO
ISS
(PMID:16846222)
GO_REF:0000024
RGD
UniProt
PMID:16846222 GO_REF:0000024 NCBI chr 4:77,812,260...77,831,846
Ensembl chr 4:77,812,260...77,831,840
JBrowse link
cellular response to cadmium ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1c3 aldo-keto reductase family 1, member C3 involved_in ISO (PMID:21787718) RGD PMID:21787718 NCBI chr17:66,110,970...66,127,867
Ensembl chr17:66,110,963...66,127,873
JBrowse link
G Akt1 AKT serine/threonine kinase 1 involved_in ISO (PMID:26514923) RGD PMID:26514923 NCBI chr 6:131,713,716...131,735,319
Ensembl chr 6:131,713,720...131,733,921
JBrowse link
G Atp7a ATPase copper transporting alpha IEP RGD PMID:17584760 RGD:8655656 NCBI chr  X:71,094,144...71,201,550
Ensembl chr  X:71,094,202...71,198,354
JBrowse link
G Cer1 cerberus 1, DAN family BMP antagonist acts_upstream_of_or_within ISO (MGI:6478982|PMID:15219627) RGD PMID:15219627 MGI:6478982 NCBI chr 5:97,306,427...97,309,783
Ensembl chr 5:97,306,431...97,309,783
JBrowse link
G Chuk component of inhibitor of nuclear factor kappa B kinase complex involved_in ISO (PMID:26514923) RGD PMID:26514923 NCBI chr 1:242,959,539...242,995,066
Ensembl chr 1:242,959,760...242,995,065
JBrowse link
G Cybb cytochrome b-245 beta chain IEP RGD PMID:21195169 RGD:11040689 NCBI chr  X:13,360,583...13,392,517
Ensembl chr  X:13,359,430...13,392,586
JBrowse link
G Cyp11a1 cytochrome P450, family 11, subfamily a, polypeptide 1 IEP RGD PMID:17719163 RGD:4835171 NCBI chr 8:58,422,807...58,434,342
Ensembl chr 8:58,404,669...58,434,338
JBrowse link
G Cyp1a2 cytochrome P450, family 1, subfamily a, polypeptide 2 acts_upstream_of_or_within ISO (MGI:3607883|PMID:16183037) RGD PMID:16183037 MGI:3607883 NCBI chr 8:58,075,367...58,082,255
Ensembl chr 8:58,075,367...58,082,312
JBrowse link
G Cyp2a3 cytochrome P450, family 2, subfamily a, polypeptide 3 acts_upstream_of_or_within ISO (MGI:3607883|PMID:16183037) RGD PMID:16183037 MGI:3607883 NCBI chr 1:82,171,914...82,179,980
Ensembl chr 1:82,169,949...82,179,979
JBrowse link
G Daxx death-domain associated protein involved_in ISS
ISO
GO_REF:0000024
(PMID:15016915)
UniProt
RGD
PMID:15016915 GO_REF:0000024 NCBI chr20:4,970,090...4,976,145
Ensembl chr20:4,970,092...4,975,843
JBrowse link
G Egfr epidermal growth factor receptor involved_in ISO (PMID:26514923) RGD PMID:26514923 NCBI chr14:91,176,931...91,349,722
Ensembl chr14:91,177,067...91,344,382
JBrowse link
G Enpp2 ectonucleotide pyrophosphatase/phosphodiesterase 2 IEP RGD PMID:24361405 RGD:9685430 NCBI chr 7:86,202,345...86,325,050
Ensembl chr 7:86,202,350...86,324,827
JBrowse link
G Fos Fos proto-oncogene, AP-1 transcription factor subunit involved_in ISO (PMID:26514923) RGD PMID:26514923 NCBI chr 6:105,121,170...105,124,036
Ensembl chr 6:105,121,170...105,124,036
JBrowse link
G Foxa2 forkhead box A2 acts_upstream_of_or_within ISO (MGI:6478982|PMID:15219627) RGD PMID:15219627 MGI:6478982 NCBI chr 3:135,470,123...135,474,326
Ensembl chr 3:135,470,131...135,474,326
JBrowse link
G Gsn gelsolin IDA RGD PMID:16280379 RGD:1599859 NCBI chr 3:18,585,166...18,638,404
Ensembl chr 3:18,585,172...18,638,402
JBrowse link
G Hesx1 HESX homeobox 1 acts_upstream_of_or_within ISO (MGI:6478982|PMID:15219627) RGD PMID:15219627 MGI:6478982 NCBI chr16:2,191,852...2,193,957
Ensembl chr16:2,191,852...2,193,957
JBrowse link
G Hmox1 heme oxygenase 1 acts_upstream_of_or_within ISO (MGI:3607883|PMID:16183037) RGD PMID:16183037 MGI:3607883 NCBI chr19:13,466,287...13,474,082
Ensembl chr19:13,467,244...13,474,079
JBrowse link
G Hsf1 heat shock transcription factor 1 involved_in ISO (PMID:10359787), (PMID:11514557), (PMID:15016915), (PMID:25963659) RGD PMID:10359787 PMID:11514557 PMID:15016915 PMID:25963659 NCBI chr 7:108,196,040...108,223,011
Ensembl chr 7:108,196,056...108,223,011
JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 IEP RGD PMID:9736451 RGD:10059378 NCBI chr 8:41,183,397...41,187,260
Ensembl chr 8:41,183,264...41,187,259
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit involved_in ISO (PMID:26514923) RGD PMID:26514923 NCBI chr 5:109,894,175...109,897,268
Ensembl chr 5:109,893,145...109,897,656
JBrowse link
G LOC100125598 metallothionein 1a pseudogene involved_in ISO (PMID:16827180), (PMID:19330122), (PMID:3403543) RGD PMID:3403543 PMID:16827180 PMID:19330122 NCBI chr17:74,786,652...74,787,040
Ensembl chr17:74,786,654...74,787,135
JBrowse link
G Mapk1 mitogen activated protein kinase 1 involved_in ISO (PMID:26514923) RGD PMID:26514923 NCBI chr11:83,957,813...84,023,629
Ensembl chr11:83,957,813...84,023,616
JBrowse link
G Mapk3 mitogen activated protein kinase 3 involved_in ISO (PMID:26514923) RGD PMID:26514923 NCBI chr 1:181,366,646...181,372,863
Ensembl chr 1:181,366,637...181,372,863
JBrowse link
G Mapk8 mitogen-activated protein kinase 8 involved_in ISO (PMID:26514923) RGD PMID:26514923 NCBI chr16:8,638,897...8,721,960
Ensembl chr16:8,638,924...8,721,981
JBrowse link
G Mapk9 mitogen-activated protein kinase 9 involved_in ISO (PMID:26514923) RGD PMID:26514923 NCBI chr10:34,169,661...34,211,138
Ensembl chr10:34,169,675...34,210,178
JBrowse link
G Mmp9 matrix metallopeptidase 9 involved_in ISO
IEA
(PMID:26514923)
GO_REF:0000107
RGD
Ensembl
PMID:26514923 GO_REF:0000107 NCBI chr 3:153,684,158...153,692,118
Ensembl chr 3:153,683,858...153,692,120
JBrowse link
G Mt1 metallothionein 1 involved_in IBA
ISO
PMID:21873635
(PMID:16827180)
RGD PMID:16827180 PMID:21873635 RGD:13792537 NCBI chr19:10,826,032...10,827,048
Ensembl chr19:10,826,032...10,827,049
JBrowse link
G Mt1m metallothionein 1M involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:3,159,023...3,159,401
Ensembl chr 5:119,728,811...119,730,073
Ensembl chr19:119,728,811...119,730,073
JBrowse link
G Mt2A metallothionein 2A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:10,832,009...10,832,783
Ensembl chr19:10,832,002...10,832,784
JBrowse link
G Mt3 metallothionein 3 involved_in IBA
ISS
ISO
PMID:21873635
GO_REF:0000024
(PMID:16387743)
UniProt
RGD
PMID:16387743 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr19:10,848,754...10,850,158
Ensembl chr19:10,848,755...10,850,158
JBrowse link
G Mt4 metallothionein 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:10,863,813...10,865,909
Ensembl chr19:10,863,813...10,865,909
JBrowse link
G Ncf1 neutrophil cytosolic factor 1 involved_in ISO (PMID:26514923) RGD PMID:26514923 NCBI chr12:22,485,382...22,494,647
Ensembl chr12:22,485,451...22,494,646
JBrowse link
G Ogg1 8-oxoguanine DNA glycosylase IEP RGD PMID:12499121 RGD:2317151 NCBI chr 4:146,474,701...146,481,959
Ensembl chr 4:146,474,750...146,484,766
JBrowse link
G Ppp5c protein phosphatase 5, catalytic subunit IEP RGD PMID:18703135 RGD:8694082 NCBI chr 1:77,690,203...77,714,507
Ensembl chr 1:77,690,208...77,714,456
JBrowse link
G Sod1 superoxide dismutase 1 IEP RGD PMID:17584760 RGD:8655656 NCBI chr11:29,456,673...29,462,249
Ensembl chr11:29,456,558...29,462,249
JBrowse link
G Sox2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO (MGI:6478982|PMID:15219627) RGD PMID:15219627 MGI:6478982 NCBI chr 2:117,536,929...117,539,338
Ensembl chr 2:117,536,929...117,539,338
JBrowse link
G Star steroidogenic acute regulatory protein IEP RGD PMID:17719163 RGD:4835171 NCBI chr16:66,267,094...66,274,368
Ensembl chr16:66,264,807...66,271,672
JBrowse link
G Sumo1 small ubiquitin-like modifier 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:11514557)
UniProt
RGD
PMID:11514557 GO_REF:0000024 NCBI chr 9:61,078,790...61,108,697
Ensembl chr 9:61,077,435...61,108,761
JBrowse link
G Ube2d2b ubiquitin-conjugating enzyme E2D 2B IEP RGD PMID:21467746 RGD:13830870 NCBI chr14:1,915,999...1,917,473
Ensembl chr14:1,916,845...1,917,416
JBrowse link
G Ube2d3 ubiquitin-conjugating enzyme E2D 3 IEP RGD PMID:21467746 RGD:13830870 NCBI chr 2:223,868,397...223,899,606
Ensembl chr 2:223,868,730...223,898,081
JBrowse link
cellular response to calcium ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acer1 alkaline ceramidase 1 involved_in ISO (PMID:17713573) RGD PMID:17713573 NCBI chr 9:1,792,790...1,824,434
Ensembl chr 9:1,793,139...1,824,434
JBrowse link
G Adcy8 adenylate cyclase 8 involved_in IEP
IDA
PMID:20410303
PMID:19158400
RGD
UniProt
PMID:19305019 PMID:20410303 PMID:19158400 RGD:7241269, RGD:7242424, RGD:13800545 NCBI chr 7:96,417,310...96,665,911
Ensembl chr 7:96,417,324...96,665,911
JBrowse link
G Add1 adducin 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:5796260|PMID:25978380)
(PMID:25978380)
Ensembl
RGD
PMID:25978380 GO_REF:0000107 MGI:5796260 NCBI chr14:76,108,643...76,167,267
Ensembl chr14:76,108,654...76,167,182
JBrowse link
G Adgrv1 adhesion G protein-coupled receptor V1 acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:5523726|PMID:24191038)
PMID:21873635
RGD PMID:24191038 PMID:21873635 MGI:5523726, RGD:13792537 NCBI chr 2:11,331,434...11,911,713
Ensembl chr 2:11,331,442...11,911,688
JBrowse link
G Akr1c3 aldo-keto reductase family 1, member C3 involved_in ISO (PMID:22170488) RGD PMID:22170488 NCBI chr17:66,110,970...66,127,867
Ensembl chr17:66,110,963...66,127,873
JBrowse link
G Alox15 arachidonate 15-lipoxygenase involved_in ISO
ISS
(PMID:17052953)
GO_REF:0000024
RGD
UniProt
PMID:17052953 GO_REF:0000024 NCBI chr10:55,060,169...55,068,885
Ensembl chr10:55,060,412...55,068,874
JBrowse link
G Alox5ap arachidonate 5-lipoxygenase activating protein involved_in ISO (PMID:2300173) RGD PMID:2300173 NCBI chr12:5,748,941...5,772,986
Ensembl chr12:5,748,944...5,772,986
JBrowse link
G Asph aspartate-beta-hydroxylase involved_in ISO (PMID:21062895) RGD PMID:21062895 NCBI chr 5:22,603,879...22,814,107
Ensembl chr 5:22,603,486...22,813,876
JBrowse link
G Braf B-Raf proto-oncogene, serine/threonine kinase involved_in ISO (PMID:18567582) RGD PMID:18567582 NCBI chr 4:68,375,484...68,510,652
Ensembl chr 4:68,384,649...68,510,463
JBrowse link
G Cacybp calcyclin binding protein IEP RGD PMID:11927578 RGD:625428 NCBI chr13:72,437,485...72,447,810
Ensembl chr13:72,437,490...72,450,177
JBrowse link
G Capn3 calpain 3 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:4839427|PMID:20460380)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:20460380 GO_REF:0000024 GO_REF:0000107 MGI:4839427 NCBI chr 3:107,407,518...107,457,858
Ensembl chr 3:107,407,850...107,457,858
JBrowse link
G Carf calcium responsive transcription factor involved_in ISO
ISS
(PMID:11832226), (PMID:22174809)
GO_REF:0000024
RGD
UniProt
PMID:11832226 PMID:22174809 GO_REF:0000024 NCBI chr 9:61,502,368...61,552,433
Ensembl chr 9:61,506,956...61,550,462
JBrowse link
G Chp2 calcineurin-like EF hand protein 2 involved_in ISO
ISS
(PMID:18815128)
GO_REF:0000024
RGD
UniProt
PMID:18815128 GO_REF:0000024 NCBI chr 1:176,757,945...176,772,443
Ensembl chr 1:176,757,876...176,772,139
JBrowse link
G Clic4 chloride intracellular channel 4 involved_in ISO (PMID:17636002) RGD PMID:17636002 NCBI chr 5:147,456,819...147,513,278
Ensembl chr 5:147,453,712...147,513,452
JBrowse link
G Cpne1 copine 1 involved_in ISO
IBA
(PMID:14674885)
PMID:21873635
RGD PMID:14674885 PMID:21873635 RGD:13792537 NCBI chr 3:144,587,548...144,629,603
Ensembl chr 3:144,588,995...144,598,636
JBrowse link
G Cpne2 copine 2 involved_in ISO
IBA
(MGI:5634886|PMID:21087455)
PMID:21873635
RGD PMID:21087455 PMID:21873635 MGI:5634886, RGD:13792537 NCBI chr19:10,434,277...10,472,146
Ensembl chr19:10,434,277...10,471,820
JBrowse link
G Cpne3 copine 3 involved_in ISO
IBA
(PMID:20010870), (PMID:21087455)
PMID:21873635
RGD PMID:20010870 PMID:21087455 PMID:21873635 RGD:13792537 NCBI chr 5:33,014,658...33,064,004
Ensembl chr 5:33,016,307...33,063,934
JBrowse link
G Cpne4 copine 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:105,177,376...105,653,075
Ensembl chr 8:105,177,376...105,653,068
JBrowse link
G Cpne5 copine 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:7,206,742...7,289,309
Ensembl chr20:7,206,742...7,288,883
JBrowse link
G Cpne6 copine 6 involved_in ISO
IBA
(MGI:5634886|PMID:21087455)
PMID:21873635
RGD PMID:21087455 PMID:21873635 MGI:5634886, RGD:13792537 NCBI chr15:28,998,293...29,005,044
Ensembl chr15:28,998,293...29,005,044
JBrowse link
G Cpne7 copine 7 involved_in ISO
IBA
(PMID:21087455)
PMID:21873635
RGD PMID:21087455 PMID:21873635 RGD:13792537 NCBI chr19:51,164,316...51,182,677
Ensembl chr19:51,166,034...51,182,677
JBrowse link
G Cpne8 copine 8 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:121,615,293...121,789,507
Ensembl chr 7:121,615,294...121,790,377
JBrowse link
G Cpne9 copine family member 9 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:146,429,961...146,454,335
Ensembl chr 4:146,430,792...146,454,333
JBrowse link
G Crhbp corticotropin releasing hormone binding protein involved_in ISS
ISO
GO_REF:0000024
(MGI:5315350|PMID:15976007)
UniProt
RGD
PMID:15976007 GO_REF:0000024 MGI:5315350 NCBI chr 2:26,692,403...26,704,710
Ensembl chr 2:26,692,403...26,704,710
JBrowse link
G Crp C-reactive protein IDA RGD PMID:22090504 RGD:6904210 NCBI chr13:85,131,635...85,175,179
Ensembl chr13:85,124,977...85,175,178
JBrowse link
G Dmtn dematin actin binding protein involved_in ISO (MGI:5465511|PMID:23060452) RGD PMID:23060452 MGI:5465511 NCBI chr15:45,677,974...45,705,601
Ensembl chr15:45,677,977...45,705,601
JBrowse link
G Dpep1 dipeptidase 1 involved_in ISO
ISS
(PMID:11139399), (PMID:17615681)
GO_REF:0000024
RGD
UniProt
PMID:11139399 PMID:17615681 GO_REF:0000024 NCBI chr19:51,209,831...51,237,004
Ensembl chr19:51,219,660...51,235,257
JBrowse link
G Ect2 epithelial cell transforming 2 involved_in ISO (PMID:15254234) RGD PMID:15254234 NCBI chr 2:109,975,813...110,037,911
Ensembl chr 2:109,975,813...110,037,911
JBrowse link
G Edn1 endothelin 1 IEP RGD PMID:1852000 RGD:8662267 NCBI chr17:22,454,924...22,460,812
Ensembl chr17:22,454,420...22,460,885
JBrowse link
G Eef2k eukaryotic elongation factor-2 kinase IEP RGD PMID:19188248 RGD:10401231 NCBI chr 1:175,393,119...175,454,452
Ensembl chr 1:175,393,154...175,455,164
JBrowse link
G Endog endonuclease G IEP RGD PMID:12582256 RGD:9685368 NCBI chr 3:13,449,113...13,451,715
Ensembl chr 3:13,449,086...13,451,932
JBrowse link
G Fos Fos proto-oncogene, AP-1 transcription factor subunit acts_upstream_of_or_within ISO (MGI:3844178|PMID:19365557) RGD PMID:19365557 MGI:3844178 NCBI chr 6:105,121,170...105,124,036
Ensembl chr 6:105,121,170...105,124,036
JBrowse link
G Fosb FosB proto-oncogene, AP-1 transcription factor subunit acts_upstream_of_or_within ISO (MGI:3846264|PMID:19303854) RGD PMID:19303854 MGI:3846264 NCBI chr 1:78,954,312...78,961,492
Ensembl chr 1:78,954,115...78,961,465
JBrowse link
G Fus Fus RNA binding protein IDA RGD PMID:19103256 RGD:9685716 NCBI chr 1:182,576,479...182,590,417
Ensembl chr 1:182,576,545...182,590,414
JBrowse link
G Gpld1 glycosylphosphatidylinositol specific phospholipase D1 involved_in IDA
IEA
ISO
PMID:1849823
GO_REF:0000107
(PMID:2760042)
Ensembl
RGD
PMID:2760042 PMID:1849823 GO_REF:0000107, RGD:8553426 NCBI chr17:40,084,427...40,132,035
Ensembl chr17:40,084,617...40,126,939
JBrowse link
G Hpca hippocalcin involved_in ISO
ISS
(PMID:28398555)
GO_REF:0000024
RGD
UniProt
PMID:28398555 GO_REF:0000024 NCBI chr 5:141,455,616...141,466,252
Ensembl chr 5:141,455,613...141,463,841
JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 IEP RGD PMID:9058202 RGD:11354978 NCBI chr 3:18,055,507...18,059,969
Ensembl chr 3:18,055,405...18,059,891
JBrowse link
G Inhbb inhibin subunit beta B IEP RGD PMID:1634019 RGD:9743923 NCBI chr13:30,530,860...30,536,566
Ensembl chr13:30,530,860...30,537,832
JBrowse link
G Iqgap1 IQ motif containing GTPase activating protein 1 involved_in ISO (PMID:18567582) RGD PMID:18567582 NCBI chr 1:134,679,581...134,769,776
Ensembl chr 1:134,679,586...134,769,755
JBrowse link
G Itpka inositol-trisphosphate 3-kinase A involved_in ISS
ISO
GO_REF:0000024
(PMID:12747803)
UniProt
RGD
PMID:12747803 GO_REF:0000024 NCBI chr 3:106,726,036...106,734,601
Ensembl chr 3:106,726,036...106,734,600
JBrowse link
G Itpkb inositol-trisphosphate 3-kinase B involved_in ISO
ISS
(PMID:1654894)
(PMID:12747803), (PMID:1654894)
GO_REF:0000024
RGD
UniProt
PMID:1654894 PMID:12747803 GO_REF:0000024 NCBI chr13:92,069,160...92,164,281
Ensembl chr13:92,069,216...92,162,004
JBrowse link
G Itpkc inositol-trisphosphate 3-kinase C involved_in ISS
ISO
GO_REF:0000024
(PMID:12747803)
UniProt
RGD
PMID:12747803 GO_REF:0000024 NCBI chr 1:82,500,957...82,522,533
Ensembl chr 1:82,500,957...82,522,779
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit acts_upstream_of_or_within ISO (MGI:3846264|PMID:19303854) RGD PMID:19303854 MGI:3846264 NCBI chr 5:109,894,175...109,897,268
Ensembl chr 5:109,893,145...109,897,656
JBrowse link
G Junb JunB proto-oncogene, AP-1 transcription factor subunit acts_upstream_of_or_within ISO (MGI:3846264|PMID:19303854) RGD PMID:19303854 MGI:3846264 NCBI chr19:23,176,265...23,178,049
Ensembl chr19:23,176,294...23,178,035
JBrowse link
G Jund JunD proto-oncogene, AP-1 transcription factor subunit acts_upstream_of_or_within ISO (MGI:3846264|PMID:19303854) RGD PMID:19303854 MGI:3846264 NCBI chr16:18,734,121...18,735,799
Ensembl chr16:18,734,122...18,735,799
JBrowse link
G Kcnb1 potassium voltage-gated channel subfamily B member 1 IDA RGD PMID:8978827 RGD:150527856 NCBI chr 3:155,820,255...155,913,383
Ensembl chr 3:155,822,963...155,916,194
JBrowse link
G Kcnh1 potassium voltage-gated channel subfamily H member 1 involved_in IDA
ISO
(PMID:27005320), (PMID:27325704)
PMID:27516594
RGD PMID:27005320 PMID:27325704 PMID:8790430 PMID:27516594 RGD:9693720, RGD:11533419 NCBI chr13:103,722,140...104,024,762
Ensembl chr13:103,722,245...104,024,740
JBrowse link
G Krt10 keratin 10 acts_upstream_of_or_within ISO (MGI:3846264|PMID:19303854) RGD PMID:19303854 MGI:3846264 NCBI chr10:84,338,695...84,343,279
Ensembl chr10:84,338,706...84,343,701
JBrowse link
G Lce1d late cornified envelope 1D acts_upstream_of_or_within ISO (PMID:11698679) RGD PMID:11698679
G Lgmn legumain involved_in ISO
IEA
(PMID:21237226)
GO_REF:0000107
RGD
Ensembl
PMID:21237226 GO_REF:0000107 NCBI chr 6:121,544,048...121,582,495
Ensembl chr 6:121,544,053...121,582,480
JBrowse link
G Mcoln1 mucolipin TRP cation channel 1 involved_in ISO (MGI:6103412|PMID:29019981) RGD PMID:29019981 MGI:6103412 NCBI chr12:1,560,341...1,574,252
Ensembl chr12:1,560,359...1,574,252
JBrowse link
G Mef2a myocyte enhancer factor 2a involved_in IDA
IEA
ISO
PMID:10521511
GO_REF:0000107
(PMID:16484498)
Ensembl
RGD
PMID:16484498 PMID:10521511 GO_REF:0000107, RGD:8553671 NCBI chr 1:120,847,874...120,982,488
Ensembl chr 1:120,850,080...120,981,948
JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISS
ISO
GO_REF:0000024
(MGI:5284792|PMID:15998798)
UniProt
RGD
PMID:15998798 GO_REF:0000024 MGI:5284792 NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880
JBrowse link
G Mylk myosin light chain kinase acts_upstream_of_or_within ISO (MGI:3805620|PMID:18524939) RGD PMID:18524939 MGI:3805620 NCBI chr11:65,783,008...66,030,239
Ensembl chr11:65,783,008...66,030,261
JBrowse link
G Ncstn nicastrin acts_upstream_of_or_within ISO MGI:3796837 (MGI:5575797|PMID:24889619) RGD PMID:24889619 MGI:5575797 NCBI chr13:84,530,442...84,546,454
Ensembl chr13:84,530,440...84,546,454
JBrowse link
G Neurod2 neuronal differentiation 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:3621523|PMID:16504944)
UniProt
RGD
PMID:16504944 GO_REF:0000024 MGI:3621523 NCBI chr10:83,323,801...83,327,986
Ensembl chr10:83,324,442...83,327,986
JBrowse link
G Nfatc3 nuclear factor of activated T-cells 3 acts_upstream_of_or_within ISO (MGI:5490841|PMID:23219532) RGD PMID:23219532 MGI:5490841 NCBI chr19:33,960,643...34,035,150
Ensembl chr19:33,960,852...34,035,150
JBrowse link
G Nlgn1 neuroligin 1 involved_in IDA PMID:14522992 ARUK-UCL PMID:14522992 RGD:13210536 NCBI chr 2:108,256,236...109,181,530
Ensembl chr 2:108,257,824...109,002,464
JBrowse link
G Nrxn1 neurexin 1 involved_in IDA PMID:14522992 ARUK-UCL PMID:14522992 RGD:13210536 NCBI chr 6:3,177,788...4,323,848
Ensembl chr 6:3,177,897...4,322,710
JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in ISO (MGI:5883145|PMID:27760766) RGD PMID:27760766 MGI:5883145 NCBI chr14:5,237,135...5,280,455
Ensembl chr14:5,237,135...5,280,825
JBrowse link
G Plcg2 phospholipase C, gamma 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:11606584)
Ensembl
RGD
PMID:11606584 GO_REF:0000107 NCBI chr19:45,547,416...45,683,930
Ensembl chr19:45,547,416...45,683,930
JBrowse link
G Ppif peptidylprolyl isomerase F involved_in ISS
ISO
GO_REF:0000024
(MGI:3575990|PMID:15800627), (MGI:3576003|PMID:15800626), (MGI:3603054|PMID:16103352)
UniProt
RGD
PMID:15800626 PMID:15800627 PMID:16103352 GO_REF:0000024 MGI:3575990 MGI:3576003 MGI:3603054 NCBI chr16:1,257,197...1,263,919
Ensembl chr16:1,257,106...1,263,913
JBrowse link
G Ppp2ca protein phosphatase 2 catalytic subunit alpha IEP RGD PMID:18322138 RGD:8693423 NCBI chr10:36,358,110...36,377,864
Ensembl chr10:36,358,101...36,377,862
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in IMP
ISO
PMID:25788287
UniProtKB:Q8BRK8 (MGI:6148484|PMID:25788287)
RGD PMID:25788287 PMID:25788287 MGI:6148484, RGD:13514090 NCBI chr 2:54,240,298...54,275,978
Ensembl chr 2:54,240,137...54,275,978
JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in IEA
ISO
IMP
GO_REF:0000107
UniProtKB:Q5EG47 (MGI:6148484|PMID:25788287)
Ensembl
RGD
PMID:25788287 PMID:25788287 GO_REF:0000107 MGI:6148484, RGD:13514090 NCBI chr 5:119,807,992...119,879,987
Ensembl chr 5:119,813,226...119,879,543
JBrowse link
G Rasa4 RAS p21 protein activator 4 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr12:20,552,805...20,580,177
Ensembl chr12:20,552,806...20,580,147
JBrowse link
G Rasal1 RAS protein activator like 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr12:35,881,269...35,913,727
Ensembl chr12:35,881,270...35,913,727
JBrowse link
G Rasgrp2 RAS guanyl releasing protein 2 involved_in ISO
IEA
(PMID:24958846)
GO_REF:0000107
RGD
Ensembl
PMID:24958846 GO_REF:0000107 NCBI chr 1:203,705,777...203,722,993
Ensembl chr 1:203,707,481...203,722,993
JBrowse link
G Rbm12 RNA binding motif protein 12 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:144,587,548...144,629,950
Ensembl chr 3:144,611,623...144,629,915
JBrowse link
G Ryr1 ryanodine receptor 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 1:84,292,578...84,423,799
Ensembl chr 1:84,292,578...84,423,812
JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 involved_in ISO
IEA
ISS
(PMID:19074138)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:19074138 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:119,220,905...119,318,816
Ensembl chr 8:119,220,905...119,318,769
JBrowse link
G Slc25a23 solute carrier family 25 member 23 acts_upstream_of_or_within ISO MGI:5500043 (MGI:5490167|PMID:23344948) RGD PMID:23344948 MGI:5490167 NCBI chr 9:1,882,636...1,898,340
Ensembl chr 9:1,882,621...1,898,561
JBrowse link
G Slc25a24 solute carrier family 25 member 24 involved_in ISO (PMID:22015608) RGD PMID:22015608 NCBI chr 2:196,761,076...196,799,236
Ensembl chr 2:196,761,274...196,799,231
JBrowse link
G Smpd1 sphingomyelin phosphodiesterase 1 involved_in ISO (PMID:20530211) RGD PMID:20530211 NCBI chr 1:159,892,946...159,896,789
Ensembl chr 1:159,892,859...159,896,794
JBrowse link
G Syt1 synaptotagmin 1 involved_in IBA
IMP
PMID:21873635
PMID:12526776
GO_Central
ParkinsonsUK-UCL
PMID:21873635 PMID:12526776 RGD:13792537, RGD:10047386 NCBI chr 7:43,813,204...44,358,020
Ensembl chr 7:43,815,785...44,357,803
JBrowse link
G Syt10 synaptotagmin 10 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:120,863,014...120,920,730
Ensembl chr 7:120,862,972...120,920,863
JBrowse link
G Syt11 synaptotagmin 11 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:174,206,032...174,232,540
Ensembl chr 2:174,206,191...174,231,964
JBrowse link
G Syt12 synaptotagmin 12 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:201,729,307...201,760,192
Ensembl chr 1:201,730,371...201,759,609
JBrowse link
G Syt13 synaptotagmin 13 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:78,877,200...78,915,375
Ensembl chr 3:78,877,114...78,917,392
JBrowse link
G Syt15 synaptotagmin 15 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:9,532,478...9,543,288
Ensembl chr16:9,532,478...9,543,281
JBrowse link
G Syt17 synaptotagmin 17 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:172,695,275...172,761,906
Ensembl chr 1:172,696,120...172,761,960
JBrowse link
G Syt2 synaptotagmin 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:46,088,046...46,197,976
Ensembl chr13:46,185,282...46,193,859
JBrowse link
G Syt3 synaptotagmin 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:94,880,835...94,895,518
Ensembl chr 1:94,881,247...94,895,246
JBrowse link
G Syt4 synaptotagmin 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:23,036,973...23,046,380
Ensembl chr18:23,038,378...23,046,332
JBrowse link
G Syt5 synaptotagmin 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:69,277,351...69,285,071
Ensembl chr 1:69,277,351...69,285,067
JBrowse link
G Syt6 synaptotagmin 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:191,093,009...191,152,283
Ensembl chr 2:191,093,007...191,149,956
JBrowse link
G Syt7 synaptotagmin 7 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:207,031,369...207,093,787
Ensembl chr 1:207,031,592...207,089,026
JBrowse link
G Syt8 synaptotagmin 8 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:197,588,126...197,593,598
Ensembl chr 1:197,590,149...197,593,504
JBrowse link
G Syt9 synaptotagmin 9 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:161,275,882...161,456,384
Ensembl chr 1:161,275,734...161,455,007
JBrowse link
G Tjp1 tight junction protein 1 involved_in ISO (PMID:8636221) RGD PMID:8636221 NCBI chr 1:118,849,838...119,094,492
Ensembl chr 1:118,849,838...119,094,432
JBrowse link
G Trpm2 transient receptor potential cation channel, subfamily M, member 2 involved_in ISO
ISS
(PMID:19171771)
GO_REF:0000024
RGD
UniProt
PMID:19171771 GO_REF:0000024 NCBI chr20:10,703,568...10,753,189
Ensembl chr20:10,707,014...10,753,181
JBrowse link
G Wnk1 WNK lysine deficient protein kinase 1 involved_in IDA PMID:24803536 UniProt PMID:24803536 RGD:12910999 NCBI chr 4:153,128,334...153,253,905
Ensembl chr 4:153,128,334...153,253,905
JBrowse link
G Wnt5a Wnt family member 5A involved_in ISO (PMID:18703641) RGD PMID:18703641 NCBI chr16:3,695,667...3,718,234
Ensembl chr16:3,697,032...3,718,234
JBrowse link
cellular response to carbon dioxide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Phox2b paired-like homeobox 2b IEP RGD PMID:19036978 RGD:152025257 NCBI chr14:41,066,012...41,069,202
Ensembl chr14:41,066,264...41,068,978
JBrowse link
G Trpa1 transient receptor potential cation channel, subfamily A, member 1 IDA RGD PMID:20881114 RGD:10043825 NCBI chr 5:4,379,999...4,433,243
Ensembl chr 5:4,379,999...4,433,570
JBrowse link
cellular response to carbon monoxide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnm2 dynamin 2 IEP RGD PMID:25100282 RGD:9685289 NCBI chr 8:19,978,313...20,060,162
Ensembl chr 8:19,978,400...20,060,157
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha IEP RGD PMID:17475674 RGD:9068879 NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
JBrowse link
cellular response to chromate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bad BCL2-associated agonist of cell death IEP RGD PMID:21262251 RGD:5128585 NCBI chr 1:204,133,502...204,142,829
Ensembl chr 1:204,131,501...204,142,823
JBrowse link
G Mt1 metallothionein 1 acts_upstream_of_or_within ISO (MGI:3820854|PMID:18605988) RGD PMID:18605988 MGI:3820854 NCBI chr19:10,826,032...10,827,048
Ensembl chr19:10,826,032...10,827,049
JBrowse link
cellular response to cobalt ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp7a ATPase copper transporting alpha IEP RGD PMID:23814049 RGD:11341692 NCBI chr  X:71,094,144...71,201,550
Ensembl chr  X:71,094,202...71,198,354
JBrowse link
G Bnip3 BCL2 interacting protein 3 involved_in ISO (PMID:20436456) RGD PMID:20436456 NCBI chr 1:193,708,164...193,725,348
Ensembl chr 1:193,708,167...193,725,359
JBrowse link
G Fas Fas cell surface death receptor IEP RGD PMID:15519734 RGD:8662904 NCBI chr 1:231,798,963...231,832,591
Ensembl chr 1:231,798,960...231,832,591
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha IEP RGD PMID:10559391 RGD:2313660 NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
JBrowse link
G Serpinf1 serpin family F member 1 IEP RGD PMID:21922517 RGD:8554899 NCBI chr10:60,250,198...60,262,593
Ensembl chr10:60,249,708...60,262,646
JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase involved_in ISO (PMID:25928429) RGD PMID:25928429 NCBI chr 4:159,927,138...159,946,094
Ensembl chr 4:159,927,139...159,946,029
JBrowse link
cellular response to copper ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aoc1 amine oxidase, copper containing 1 involved_in ISO
ISS
(PMID:9399025)
GO_REF:0000024
RGD
UniProt
PMID:9399025 GO_REF:0000024 NCBI chr 4:77,812,260...77,831,846
Ensembl chr 4:77,812,260...77,831,840
JBrowse link
G App amyloid beta precursor protein IEP RGD PMID:18583042 RGD:13782134 NCBI chr11:24,019,774...24,236,584
Ensembl chr11:24,019,778...24,236,561
JBrowse link
G Aqp1 aquaporin 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:7491270), (PMID:8584435)
UniProt
RGD
PMID:7491270 PMID:8584435 GO_REF:0000024 NCBI chr 4:84,482,512...84,494,690
Ensembl chr 4:84,482,512...84,494,690
JBrowse link
G Aqp2 aquaporin 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:8584435)
Ensembl
RGD
PMID:8584435 GO_REF:0000107 NCBI chr 7:130,711,433...130,716,468
Ensembl chr 7:130,711,413...130,716,468
JBrowse link
G Atp7a ATPase copper transporting alpha IEP
IDA
RGD PMID:23174565 PMID:20671235 RGD:11341702, RGD:11341707 NCBI chr  X:71,094,144...71,201,550
Ensembl chr  X:71,094,202...71,198,354
JBrowse link
G Atp7b ATPase copper transporting beta IMP
IEP
RGD PMID:24614235 PMID:24614235 RGD:11341682, RGD:11341682 NCBI chr16:69,952,286...70,024,404
Ensembl chr16:69,951,778...70,023,636
JBrowse link
G Bace1 beta-secretase 1 IEP RGD PMID:18583042 RGD:13782134 NCBI chr 8:46,142,060...46,166,268
Ensembl chr 8:46,142,116...46,165,876
JBrowse link
G Becn1 beclin 1 IEP RGD PMID:22540380 RGD:11561917 NCBI chr10:86,231,387...86,246,742
Ensembl chr10:86,231,388...86,246,742
JBrowse link
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 IEP RGD PMID:24599699 RGD:11352816 NCBI chr 8:58,096,021...58,102,130
Ensembl chr 8:58,096,077...58,102,125
JBrowse link
G Cyp1a2 cytochrome P450, family 1, subfamily a, polypeptide 2 IEP RGD PMID:24599699 RGD:11352816 NCBI chr 8:58,075,367...58,082,255
Ensembl chr 8:58,075,367...58,082,312
JBrowse link
G Daxx death-domain associated protein involved_in ISO
ISS
(PMID:15016915)
GO_REF:0000024
RGD
UniProt
PMID:15016915 GO_REF:0000024 NCBI chr20:4,970,090...4,976,145
Ensembl chr20:4,970,092...4,975,843
JBrowse link
G Eln elastin IEP RGD PMID:18847363 RGD:9585685 NCBI chr12:21,968,544...22,011,929
Ensembl chr12:21,968,544...22,011,928
JBrowse link
G Hsf1 heat shock transcription factor 1 involved_in ISO (PMID:15016915) RGD PMID:15016915 NCBI chr 7:108,196,040...108,223,011
Ensembl chr 7:108,196,056...108,223,011
JBrowse link
G LOC100125598 metallothionein 1a pseudogene involved_in ISO (PMID:3403543) RGD PMID:3403543 NCBI chr17:74,786,652...74,787,040
Ensembl chr17:74,786,654...74,787,135
JBrowse link
G Map1lc3a microtubule-associated protein 1 light chain 3 alpha IEP RGD PMID:22540380 RGD:11561917 NCBI chr 3:143,783,024...143,784,670
Ensembl chr 3:143,783,024...143,784,670
JBrowse link
G Mt1 metallothionein 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:10,826,032...10,827,048
Ensembl chr19:10,826,032...10,827,049
JBrowse link
G Mt1m metallothionein 1M involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:3,159,023...3,159,401
Ensembl chr 5:119,728,811...119,730,073
Ensembl chr19:119,728,811...119,730,073
JBrowse link
G Mt2A metallothionein 2A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:10,832,009...10,832,783
Ensembl chr19:10,832,002...10,832,784
JBrowse link
G Mt3 metallothionein 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:10,848,754...10,850,158
Ensembl chr19:10,848,755...10,850,158
JBrowse link
G Mt4 metallothionein 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:10,863,813...10,865,909
Ensembl chr19:10,863,813...10,865,909
JBrowse link
G Nfe2l1 NFE2 like bZIP transcription factor 1 acts_upstream_of_or_within ISO MGI:2385929 (MGI:5577246|PMID:24462598) RGD PMID:24462598 MGI:5577246 NCBI chr10:81,796,055...81,812,926
Ensembl chr10:81,800,366...81,832,318
JBrowse link
G Nfe2l2 NFE2 like bZIP transcription factor 2 acts_upstream_of_or_within ISO MGI:2385925 (MGI:5577246|PMID:24462598) RGD PMID:24462598 MGI:5577246 NCBI chr 3:60,594,239...60,621,785
Ensembl chr 3:60,594,242...60,621,737
JBrowse link
G Prnp prion protein acts_upstream_of_or_within ISO (PMID:16254249) RGD PMID:16254249 NCBI chr 3:119,186,073...119,201,513
Ensembl chr 3:119,177,485...119,203,937
JBrowse link
G Snca synuclein alpha involved_in ISO (PMID:21320589) RGD PMID:21320589 NCBI chr 4:89,696,420...89,797,240
Ensembl chr 4:89,696,420...89,796,262
JBrowse link
G Txnrd1 thioredoxin reductase 1 IEP RGD PMID:19781568 RGD:5130971 NCBI chr 7:20,830,042...20,914,990
Ensembl chr 7:20,830,045...20,907,863
JBrowse link
cellular response to hydroxyurea term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atrx ATRX, chromatin remodeler involved_in ISS
ISO
GO_REF:0000024
(MGI:5568153|PMID:24651726)
UniProt
RGD
PMID:24651726 GO_REF:0000024 MGI:5568153 NCBI chr  X:70,850,981...70,997,330
Ensembl chr  X:70,850,981...70,997,330
JBrowse link
G Blm BLM RecQ like helicase involved_in ISO (PMID:23509288) RGD PMID:23509288 NCBI chr 1:134,409,832...134,496,073
Ensembl chr 1:134,409,857...134,484,312
JBrowse link
G Ddi1 DNA-damage inducible 1 homolog 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:29290612)
UniProt
RGD
PMID:29290612 GO_REF:0000024 NCBI chr 8:3,596,658...3,598,505
Ensembl chr 8:3,595,149...3,598,533
JBrowse link
G Ddi2 DNA damage inducible 1 homolog 2 involved_in ISO (PMID:29290612) RGD PMID:29290612 NCBI chr 5:153,989,596...154,035,342
Ensembl chr 5:153,995,589...154,035,283
JBrowse link
G Ddx11 DEAD/H-box helicase 11 involved_in ISO (PMID:23797032), (PMID:26503245) RGD PMID:23797032 PMID:26503245 NCBI chr 9:105,833,234...105,862,844
Ensembl chr 9:105,833,504...105,862,550
JBrowse link
G Fmr1 fragile X messenger ribonucleoprotein 1 involved_in ISO (MGI:5602914|PMID:24813610) RGD PMID:24813610 MGI:5602914 NCBI chr  X:147,240,239...147,278,057
Ensembl chr  X:147,240,301...147,278,050
JBrowse link
G Nsmce3 NSE3 homolog, SMC5-SMC6 complex component involved_in ISO (PMID:27427983) RGD PMID:27427983 NCBI chr 1:118,401,302...118,402,629 JBrowse link
G Rad51 RAD51 recombinase acts_upstream_of_or_within ISO MGI:5444025 (MGI:5442243|PMID:22778135) RGD PMID:22778135 MGI:5442243 NCBI chr 3:106,099,753...106,125,038
Ensembl chr 3:106,100,381...106,125,035
JBrowse link
G Rnf4 ring finger protein 4 IMP RGD PMID:22661230 RGD:9480235 NCBI chr14:76,401,292...76,423,270
Ensembl chr14:76,401,299...76,422,566
JBrowse link
G Rtfdc1 replication termination factor 2 domain containing 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:29290612)
UniProt
RGD
PMID:29290612 GO_REF:0000024 NCBI chr 3:161,208,005...161,237,687
Ensembl chr 3:161,208,049...161,237,687
JBrowse link
G Spidr scaffold protein involved in DNA repair involved_in ISO (PMID:23509288) RGD PMID:23509288 NCBI chr11:84,766,593...85,007,597
Ensembl chr11:84,766,593...85,007,600
JBrowse link
G Timeless timeless circadian regulator involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:23797032)
UniProt
Ensembl
RGD
PMID:23797032 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:654,804...678,769
Ensembl chr 7:654,822...678,738
JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within ISO (MGI:3818783|PMID:18045533) RGD PMID:18045533 MGI:3818783 NCBI chr 8:109,706,613...109,707,913
Ensembl chr 8:109,706,613...109,708,796
JBrowse link
cellular response to iron ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp7a ATPase copper transporting alpha IEP RGD PMID:23174565 PMID:19679821 RGD:11341702, RGD:11341808 NCBI chr  X:71,094,144...71,201,550
Ensembl chr  X:71,094,202...71,198,354
JBrowse link
G B2m beta-2 microglobulin involved_in ISO UniProtKB:P02787|UniProtKB:Q07891|UniProtKB:Q30201|UniProtKB:Q9UP52 (PMID:18353247) RGD PMID:18353247 NCBI chr 3:109,095,740...109,101,764
Ensembl chr 3:109,095,729...109,101,766
JBrowse link
G Bmp6 bone morphogenetic protein 6 involved_in ISO (MGI:4352622|PMID:19252488) RGD PMID:19252488 MGI:4352622 NCBI chr17:26,318,121...26,469,034
Ensembl chr17:26,318,569...26,470,365
JBrowse link
G Hfe homeostatic iron regulator involved_in ISO UniProtKB:P02787|UniProtKB:P61769|UniProtKB:Q07891|UniProtKB:Q9UP52 (PMID:18353247) RGD PMID:18353247 NCBI chr17:41,413,451...41,421,502
Ensembl chr17:41,413,451...41,421,502
JBrowse link
G Slc11a2 solute carrier family 11 member 2 IEP RGD PMID:17663481 RGD:5688717 NCBI chr 7:131,503,076...131,540,246
Ensembl chr 7:131,503,081...131,540,145
JBrowse link
G Tf transferrin involved_in ISO UniProtKB:Q07891|UniProtKB:Q9UP52 (PMID:18353247) RGD PMID:18353247 NCBI chr 8:103,789,780...103,816,487
Ensembl chr 8:103,767,995...103,816,511
JBrowse link
G Tfap2a transcription factor AP-2 alpha involved_in ISS
ISO
GO_REF:0000024
(PMID:20808827)
UniProt
RGD
PMID:20808827 GO_REF:0000024 NCBI chr17:24,028,716...24,047,507
Ensembl chr17:24,024,432...24,047,507
JBrowse link
G Tfr2 transferrin receptor 2 involved_in ISO UniProtKB:P02787|UniProtKB:Q07891 (PMID:18353247) RGD PMID:18353247 NCBI chr12:19,107,673...19,124,622
Ensembl chr12:19,107,673...19,124,591
JBrowse link
cellular response to iron(II) ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpld1 glycosylphosphatidylinositol specific phospholipase D1 involved_in IDA PMID:1849823 UniProt PMID:1849823 RGD:8553426 NCBI chr17:40,084,427...40,132,035
Ensembl chr17:40,084,617...40,126,939
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta IEP RGD PMID:19608791 RGD:10045561 NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
JBrowse link
cellular response to iron(III) ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2m beta-2 microglobulin acts_upstream_of_or_within ISO MGI:1927183 (MGI:1203460|PMID:9531620) RGD PMID:9531620 MGI:1203460 NCBI chr 3:109,095,740...109,101,764
Ensembl chr 3:109,095,729...109,101,766
JBrowse link
G Ccnb1 cyclin B1 IEP ferric ammonium citrate RGD PMID:18254965 RGD:2316320 NCBI chr 2:31,912,190...31,921,163
Ensembl chr 2:31,912,193...31,921,172
JBrowse link
G Ireb2 iron responsive element binding protein 2 IEP
IDA
RGD PMID:17469137 PMID:16135072 RGD:12904039, RGD:12904046 NCBI chr 8:55,228,080...55,311,613
Ensembl chr 8:55,228,085...55,311,611
JBrowse link
G Mmp1 matrix metallopeptidase 1 IEP RGD PMID:21683124 RGD:7207286 NCBI chr 8:4,658,588...4,679,099
Ensembl chr 8:4,658,588...4,679,097
JBrowse link
G Mmp9 matrix metallopeptidase 9 IEP RGD PMID:21683124 RGD:7207286 NCBI chr 3:153,684,158...153,692,118
Ensembl chr 3:153,683,858...153,692,120
JBrowse link
cellular response to lead ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alad aminolevulinate dehydratase IEP lead, gallium RGD PMID:16566714 RGD:4144781 NCBI chr 5:75,961,993...75,972,334
Ensembl chr 5:75,961,993...75,972,474
JBrowse link
G Anxa5 annexin A5 IEP RGD PMID:11578147 RGD:10053705 NCBI chr 2:119,314,007...119,344,703
Ensembl chr 2:119,314,007...119,353,369
JBrowse link
G Atp7a ATPase copper transporting alpha IEP RGD PMID:24316150 RGD:11341684 NCBI chr  X:71,094,144...71,201,550
Ensembl chr  X:71,094,202...71,198,354
JBrowse link
G Cldn1 claudin 1 IEP RGD PMID:17439918 RGD:11344879 NCBI chr11:74,421,569...74,436,728
Ensembl chr11:74,421,569...74,436,724
JBrowse link
G Dnmt1 DNA methyltransferase 1 IEP RGD PMID:22764079 RGD:9588241 NCBI chr 8:19,440,611...19,486,659
Ensembl chr 8:19,440,611...19,486,659
JBrowse link
G Hmbs hydroxymethylbilane synthase IEP RGD PMID:16566714 RGD:4144781 NCBI chr 8:44,673,554...44,680,950
Ensembl chr 8:44,673,554...44,680,957
JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 IEP RGD PMID:25193092 RGD:13207490 NCBI chr13:62,164,080...62,169,770
Ensembl chr13:62,163,932...62,172,188
JBrowse link
cellular response to lithium ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy7 adenylate cyclase 7 involved_in ISO (MGI:6162268|PMID:18205980) RGD PMID:18205980 MGI:6162268 NCBI chr19:18,740,875...18,798,924
Ensembl chr19:18,740,875...18,776,311
JBrowse link
G Calr calreticulin IEP RGD PMID:16236328 RGD:2326183 NCBI chr19:23,308,525...23,313,420
Ensembl chr19:23,308,351...23,313,414
JBrowse link
G Cdh1 cadherin 1 involved_in ISO (PMID:12937339) RGD PMID:12937339 NCBI chr19:34,492,371...34,561,775
Ensembl chr19:34,492,371...34,561,775
JBrowse link
G Cdkn1b cyclin-dependent kinase inhibitor 1B acts_upstream_of_or_within ISO (PMID:19056892) RGD PMID:19056892 NCBI chr 4:167,760,067...167,765,177
Ensembl chr 4:167,760,181...167,764,982
JBrowse link
G Cebpa CCAAT/enhancer binding protein alpha acts_upstream_of_or_within ISO (MGI:3581945|PMID:15673614) RGD PMID:15673614 MGI:3581945 NCBI chr 1:87,759,631...87,762,303
Ensembl chr 1:87,759,433...87,762,412
JBrowse link
G Ctnnb1 catenin beta 1 IEP RGD PMID:12610652 RGD:10395276 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
JBrowse link
G Fabp4 fatty acid binding protein 4 acts_upstream_of_or_within ISO (MGI:3581945|PMID:15673614) RGD PMID:15673614 MGI:3581945 NCBI chr 2:91,580,858...91,585,578
Ensembl chr 2:91,580,885...91,585,578
JBrowse link
G Fas Fas cell surface death receptor acts_upstream_of_or_within ISO MGI:1856334 (MGI:4829576|PMID:20530871) RGD PMID:20530871 MGI:4829576 NCBI chr 1:231,798,963...231,832,591
Ensembl chr 1:231,798,960...231,832,591
JBrowse link
G Gsk3a glycogen synthase kinase 3 alpha acts_upstream_of_or_within ISO (MGI:3581945|PMID:15673614) RGD PMID:15673614 MGI:3581945 NCBI chr 1:80,815,843...80,825,732
Ensembl chr 1:80,815,850...80,825,802
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta IEP RGD PMID:18932008 RGD:10045540 NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
JBrowse link
G Gsta4 glutathione S-transferase alpha 4 IEP RGD PMID:18082333 RGD:2293846 NCBI chr 8:79,066,967...79,084,193
Ensembl chr 8:79,066,934...79,084,182
JBrowse link
G Id2 inhibitor of DNA binding 2 acts_upstream_of_or_within ISO (MGI:3788965|PMID:18367557) RGD PMID:18367557 MGI:3788965 NCBI chr 6:41,740,556...41,742,393
Ensembl chr 6:41,728,946...41,744,400
JBrowse link
G Lig4 DNA ligase 4 IEP RGD PMID:19285016 RGD:2317095 NCBI chr16:79,518,393...79,526,956
Ensembl chr16:79,518,312...79,527,040
JBrowse link
G Myog myogenin acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3581945|PMID:15673614)
GO_REF:0000107
RGD
Ensembl
PMID:15673614 GO_REF:0000107 MGI:3581945 NCBI chr13:45,745,455...45,748,044
Ensembl chr13:45,745,436...45,748,039
JBrowse link
G Nfatc3 nuclear factor of activated T-cells 3 acts_upstream_of_or_within ISO (MGI:4829576|PMID:20530871) RGD PMID:20530871 MGI:4829576 NCBI chr19:33,960,643...34,035,150
Ensembl chr19:33,960,852...34,035,150
JBrowse link
G Nfatc4 nuclear factor of activated T-cells 4 acts_upstream_of_or_within ISO (MGI:4829576|PMID:20530871) RGD PMID:20530871 MGI:4829576 NCBI chr15:29,286,998...29,314,610
Ensembl chr15:29,305,535...29,314,610
JBrowse link
G Nos2 nitric oxide synthase 2 IEP RGD PMID:21994254 RGD:5508722 NCBI chr10:63,815,308...63,851,208
Ensembl chr10:63,815,308...63,851,210
JBrowse link
G Nts neurotensin IEP RGD PMID:7898306 RGD:9743905 NCBI chr 7:37,564,944...37,574,350
Ensembl chr 7:37,564,533...37,574,423
JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma acts_upstream_of_or_within ISO (MGI:3581945|PMID:15673614) RGD PMID:15673614 MGI:3581945 NCBI chr 4:148,423,102...148,548,471
Ensembl chr 4:148,423,194...148,548,468
JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3703195|PMID:17284610)
Ensembl
RGD
PMID:17284610 GO_REF:0000107 MGI:3703195 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
JBrowse link
G Slc13a5 solute carrier family 13 member 5 involved_in ISO
IEA
ISS
(PMID:26324167)
(MGI:6716963|PMID:26324167)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:26324167 GO_REF:0000024 GO_REF:0000107 MGI:6716963 NCBI chr10:56,866,249...56,891,189
Ensembl chr10:56,866,249...56,890,945
JBrowse link
G Slc18a1 solute carrier family 18 member A1 IEP RGD PMID:11080216 RGD:5131196 NCBI chr16:20,653,268...20,687,051
Ensembl chr16:20,653,508...20,687,051
JBrowse link
G Tph2 tryptophan hydroxylase 2 IEP RGD PMID:19840776 RGD:2317083 NCBI chr 7:50,685,694...50,789,424
Ensembl chr 7:50,685,694...50,789,424
JBrowse link
G Xrcc4 X-ray repair cross complementing 4 IEP RGD PMID:19285016 RGD:2317095 NCBI chr 2:20,948,464...21,197,705
Ensembl chr 2:20,951,200...21,197,808
JBrowse link
cellular response to magnesium ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank3 ankyrin 3 involved_in ISS
ISO
GO_REF:0000024
(MGI:5613458|PMID:23903368)
UniProt
RGD
PMID:23903368 GO_REF:0000024 MGI:5613458 NCBI chr20:18,602,267...19,225,831
Ensembl chr20:18,602,786...19,086,300
JBrowse link
G Fbp1 fructose-bisphosphatase 1 involved_in ISO
IEA
ISS
(PMID:10222032)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:10222032 GO_REF:0000024 GO_REF:0000107 NCBI chr17:2,207,271...2,230,076
Ensembl chr17:2,208,031...2,230,071
JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A IEP RGD PMID:19154422 RGD:2326036 NCBI chr10:5,630,684...6,043,341
Ensembl chr10:5,631,369...6,044,637
JBrowse link
G Kcna1 potassium voltage-gated channel subfamily A member 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5613458|PMID:23903368)
UniProt
RGD
PMID:23903368 GO_REF:0000024 MGI:5613458 NCBI chr 4:159,464,223...159,472,905
Ensembl chr 4:159,464,188...159,472,682
JBrowse link
G Kcnj1 potassium inwardly-rectifying channel, subfamily J, member 1 IDA RGD PMID:21030597 RGD:7244391 NCBI chr 8:30,779,883...30,808,607
Ensembl chr 8:30,753,617...30,813,796
JBrowse link
G Nos3 nitric oxide synthase 3 IEP RGD PMID:15919495 RGD:7794721 NCBI chr 4:10,793,834...10,814,170
Ensembl chr 4:10,793,834...10,814,166
JBrowse link
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 IEP RGD PMID:20350433 RGD:4892212 NCBI chr18:31,271,681...31,393,320
Ensembl chr18:31,271,681...31,393,375
JBrowse link
G Slc41a1 solute carrier family 41 member 1 involved_in ISO
ISS
UniProtKB:E1BYV3 (PMID:21696366)
(MGI:5780542|PMID:15713785)
GO_REF:0000024
RGD
ParkinsonsUK-UCL
PMID:15713785 PMID:21696366 GO_REF:0000024 MGI:5780542 NCBI chr13:43,270,792...43,291,162
Ensembl chr13:43,270,792...43,291,162
JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5529577|PMID:23973266)
Ensembl
RGD
PMID:23973266 GO_REF:0000107 MGI:5529577 NCBI chr19:34,162,337...34,245,786
Ensembl chr19:34,162,341...34,245,749
JBrowse link
cellular response to manganese ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A3galt2 alpha 1,3-galactosyltransferase 2 IDA RGD PMID:1569388 RGD:13831122 NCBI chr 5:141,101,329...141,113,760
Ensembl chr 5:141,107,983...141,115,641
JBrowse link
G App amyloid beta precursor protein IEP RGD PMID:18583042 RGD:13782134 NCBI chr11:24,019,774...24,236,584
Ensembl chr11:24,019,778...24,236,561
JBrowse link
G Atp13a2 ATPase cation transporting 13A2 involved_in ISO (PMID:22285144) RGD PMID:22285144 NCBI chr 5:153,292,722...153,312,143
Ensembl chr 5:153,292,751...153,312,139
JBrowse link
G Atp7b ATPase copper transporting beta IEP RGD PMID:24614235 RGD:11341682 NCBI chr16:69,952,286...70,024,404
Ensembl chr16:69,951,778...70,023,636
JBrowse link
G Bace1 beta-secretase 1 IEP RGD PMID:18583042 RGD:13782134 NCBI chr 8:46,142,060...46,166,268
Ensembl chr 8:46,142,116...46,165,876
JBrowse link
G Casp12 caspase 12 involved_in IEP PMID:23934647 ParkinsonsUK-UCL PMID:23934647 RGD:10047151 NCBI chr 8:2,642,296...2,669,549
Ensembl chr 8:2,642,434...2,674,037
JBrowse link
G Dbh dopamine beta-hydroxylase IEP RGD PMID:19276553 RGD:5129515 NCBI chr 3:10,488,260...10,505,245
Ensembl chr 3:10,488,260...10,505,248
JBrowse link
G Ddit3 DNA-damage inducible transcript 3 involved_in IEP PMID:23934647 ParkinsonsUK-UCL PMID:23934647 RGD:10047151 NCBI chr 7:63,115,645...63,121,203
Ensembl chr 7:63,116,380...63,121,201
JBrowse link
G Ern1 endoplasmic reticulum to nucleus signaling 1 involved_in IEP PMID:23934647 ParkinsonsUK-UCL PMID:23934647 RGD:10047151 NCBI chr10:91,326,889...91,421,201
Ensembl chr10:91,330,654...91,421,029
JBrowse link
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 IEP RGD PMID:19643132 RGD:2325970 NCBI chr 3:8,103,680...8,130,603
Ensembl chr 3:8,103,680...8,130,603
JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A IEP RGD PMID:19643132 RGD:2325970 NCBI chr10:5,630,684...6,043,341
Ensembl chr10:5,631,369...6,044,637
JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B IEP RGD PMID:19643132 RGD:2325970 NCBI chr 4:168,580,824...169,044,110
Ensembl chr 4:168,599,546...169,042,279
JBrowse link
G Hsp90b1 heat shock protein 90 beta family member 1 involved_in IEP PMID:23934647 ParkinsonsUK-UCL PMID:23934647 RGD:10047151 NCBI chr 7:21,110,431...21,124,762
Ensembl chr 7:21,110,457...21,124,788
JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 involved_in IEP PMID:23934647 ParkinsonsUK-UCL PMID:23934647 RGD:10047151 NCBI chr 3:18,055,507...18,059,969
Ensembl chr 3:18,055,405...18,059,891
JBrowse link
G Ireb2 iron responsive element binding protein 2 IEP
IDA
RGD PMID:17469137 PMID:16568477 RGD:12904039, RGD:12904041 NCBI chr 8:55,228,080...55,311,613
Ensembl chr 8:55,228,085...55,311,611
JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 involved_in ISO (PMID:23628791) RGD PMID:23628791 NCBI chr 7:122,826,712...122,987,711
Ensembl chr 7:122,826,696...122,987,703
JBrowse link
G Mfn2 mitofusin 2 IEP RGD PMID:28232070 RGD:12910738 NCBI chr 5:158,304,285...158,335,502
Ensembl chr 5:158,304,287...158,335,342
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase IEP RGD PMID:19781568 RGD:5130971 NCBI chr 1:48,688,651...49,882,520
Ensembl chr 1:48,690,556...49,882,555
JBrowse link
G Th tyrosine hydroxylase IEP RGD PMID:19781568 RGD:5130971 NCBI chr 1:198,071,500...198,078,832
Ensembl chr 1:198,071,503...198,109,767
JBrowse link
cellular response to mercury ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp1 aquaporin 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:12172703), (PMID:12745312), (PMID:7491270), (PMID:8584435), (PMID:9321919)
UniProt
RGD
PMID:7491270 PMID:8584435 PMID:9321919 PMID:12172703 PMID:12745312 GO_REF:0000024 NCBI chr 4:84,482,512...84,494,690
Ensembl chr 4:84,482,512...84,494,690
JBrowse link
G Aqp2 aquaporin 2 involved_in ISO
IEA
(PMID:8584435)
GO_REF:0000107
RGD
Ensembl
PMID:8584435 GO_REF:0000107 NCBI chr 7:130,711,433...130,716,468
Ensembl chr 7:130,711,413...130,716,468
JBrowse link
G Fn1 fibronectin 1 IDA RGD PMID:11768240 RGD:729934 NCBI chr 9:73,196,044...73,264,695
Ensembl chr 9:73,196,044...73,264,678
JBrowse link
G Hsd3b1 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 IEP RGD PMID:2253967 RGD:4889587 NCBI chr 2:186,169,864...186,175,984
Ensembl chr 2:186,169,863...186,175,999
JBrowse link
G Il4 interleukin 4 IEP RGD PMID:19604304 PMID:7657819 RGD:2317279, RGD:2317674 NCBI chr10:37,771,203...37,776,750
Ensembl chr10:37,771,203...37,776,750
JBrowse link
G Slc1a1 solute carrier family 1 member 1 acts_upstream_of_or_within ISO (MGI:6479661|PMID:15635608) RGD PMID:15635608 MGI:6479661 NCBI chr 1:226,549,932...226,631,925
Ensembl chr 1:226,549,842...226,630,402
JBrowse link
G Ube2d3 ubiquitin-conjugating enzyme E2D 3 IEP RGD PMID:24212999 RGD:13830869 NCBI chr 2:223,868,397...223,899,606
Ensembl chr 2:223,868,730...223,898,081
JBrowse link
cellular response to metal ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd86 CD86 molecule IEP titanium oxide particles RGD PMID:19653805 RGD:4892213 NCBI chr11:64,142,193...64,200,816
Ensembl chr11:64,163,828...64,200,818
JBrowse link
G Fstl3 follistatin like 3 IEP potassium RGD PMID:14692692 RGD:1302294 NCBI chr 7:9,924,670...9,929,195
Ensembl chr 7:9,923,576...9,939,639
JBrowse link
G Hsd17b1 hydroxysteroid (17-beta) dehydrogenase 1 IEP hexavalent chromium RGD PMID:18602937 RGD:4890967 NCBI chr10:86,009,728...86,011,928
Ensembl chr10:86,009,728...86,011,927
JBrowse link
G Hsd17b2 hydroxysteroid (17-beta) dehydrogenase 2 IEP hexavalent chromium RGD PMID:18602937 RGD:4890967 NCBI chr19:45,753,576...45,825,203
Ensembl chr19:45,753,574...45,825,202
JBrowse link
G Nqo1 NAD(P)H quinone dehydrogenase 1 IEP lanthanum RGD PMID:28722058 RGD:13439714 NCBI chr19:35,295,633...35,310,528
Ensembl chr19:35,295,573...35,310,557
JBrowse link
G Serpine1 serpin family E member 1 IEP barium RGD PMID:21596853 RGD:8547918 NCBI chr12:19,601,272...19,611,657
Ensembl chr12:19,601,272...19,611,657
JBrowse link
G Slc34a1 solute carrier family 34 member 1 IEP uranium RGD PMID:16476458 RGD:7243141 NCBI chr17:9,218,876...9,233,852
Ensembl chr17:9,218,876...9,233,852
JBrowse link
G Star steroidogenic acute regulatory protein IEP hexavalent chromium RGD PMID:18602937 RGD:4890967 NCBI chr16:66,267,094...66,274,368
Ensembl chr16:66,264,807...66,271,672
JBrowse link
G Tlr9 toll-like receptor 9 IEP tin
titanium
RGD PMID:21308757 PMID:17415764 RGD:5129495, RGD:5130196 NCBI chr 8:106,864,680...106,868,796
Ensembl chr 8:106,864,680...106,868,796
JBrowse link
cellular response to nitric oxide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aifm1 apoptosis inducing factor, mitochondria associated 1 IEP RGD PMID:18560609 RGD:10053561 NCBI chr  X:127,650,223...127,689,356
Ensembl chr  X:127,650,226...127,689,256
JBrowse link
G Aqp1 aquaporin 1 involved_in ISO (PMID:14561230) RGD PMID:14561230 NCBI chr 4:84,482,512...84,494,690
Ensembl chr 4:84,482,512...84,494,690
JBrowse link
G Atp5f1a ATP synthase F1 subunit alpha IEP RGD PMID:25658244 RGD:11352582 NCBI chr18:71,292,406...71,300,342
Ensembl chr18:71,292,374...71,300,794
JBrowse link
G Atp5f1c ATP synthase F1 subunit gamma IEP RGD PMID:25658244 RGD:11352582 NCBI chr17:68,423,927...68,446,169
Ensembl chr17:68,423,909...68,608,367
JBrowse link
G Bcar1 BCAR1 scaffold protein, Cas family member IPI RGD PMID:12714323 RGD:1298802 NCBI chr19:39,679,218...39,713,952
Ensembl chr19:39,679,204...39,713,907
JBrowse link
G Ccna2 cyclin A2 IEP RGD PMID:9610538 RGD:10054495 NCBI chr 2:119,427,239...119,433,645
Ensembl chr 2:119,426,089...119,433,577
JBrowse link
G Cflar CASP8 and FADD-like apoptosis regulator IMP RGD PMID:18292530 RGD:11341712 NCBI chr 9:60,185,338...60,236,173
Ensembl chr 9:60,185,452...60,237,034
JBrowse link
G Crk CRK proto-oncogene, adaptor protein IPI RGD PMID:12714323 RGD:1298802 NCBI chr10:60,530,469...60,556,703
Ensembl chr10:60,530,464...60,553,406
JBrowse link
G Crp C-reactive protein IEP RGD PMID:9704587 RGD:9586007 NCBI chr13:85,131,635...85,175,179
Ensembl chr13:85,124,977...85,175,178
JBrowse link
G Dnm2 dynamin 2 IEP RGD PMID:25100282 RGD:9685289 NCBI chr 8:19,978,313...20,060,162
Ensembl chr 8:19,978,400...20,060,157
JBrowse link
G Dpep1 dipeptidase 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:11988094)
UniProt
RGD
PMID:11988094 GO_REF:0000024 NCBI chr19:51,209,831...51,237,004
Ensembl chr19:51,219,660...51,235,257
JBrowse link
G Foxo1 forkhead box O1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5437421|PMID:21196578)
UniProt
RGD
PMID:21196578 GO_REF:0000024 MGI:5437421 NCBI chr 2:136,312,168...136,390,603
Ensembl chr 2:136,312,168...136,387,790
JBrowse link
G Gucy1b1 guanylate cyclase 1 soluble subunit beta 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 2:167,348,824...167,398,983
Ensembl chr 2:167,348,825...167,398,916
JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D IDA RGD PMID:16683234 RGD:10042976 NCBI chr14:9,615,375...9,638,975
Ensembl chr14:9,615,479...9,633,786
JBrowse link
G Kcnc2 potassium voltage-gated channel subfamily C member 2 involved_in IDA PMID:11281123 UniProt PMID:11281123 RGD:10047322 NCBI chr 7:47,700,035...47,883,979
Ensembl chr 7:47,700,288...47,883,968
JBrowse link
G Mapk8 mitogen-activated protein kinase 8 acts_upstream_of_or_within ISO (MGI:3837511|PMID:18007661) RGD PMID:18007661 MGI:3837511 NCBI chr16:8,638,897...8,721,960
Ensembl chr16:8,638,924...8,721,981
JBrowse link
G Mt3 metallothionein 3 involved_in ISO
ISS
(PMID:18157556)
GO_REF:0000024
RGD
UniProt
PMID:18157556 GO_REF:0000024 NCBI chr19:10,848,754...10,850,158
Ensembl chr19:10,848,755...10,850,158
JBrowse link
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase involved_in IDA PMID:20424322 BHF-UCL PMID:20424322 RGD:10054082 NCBI chr17:58,219,998...58,308,560
Ensembl chr17:58,220,071...58,304,822
JBrowse link
G Sftpa1 surfactant protein A1 IEP RGD PMID:15640287 RGD:4143401 NCBI chr16:17,008,180...17,011,686
Ensembl chr16:17,008,180...17,011,685
JBrowse link
G Sftpb surfactant protein B IEP RGD PMID:15640287 RGD:4143401 NCBI chr 4:104,359,303...104,368,439
Ensembl chr 4:104,359,396...104,368,436
JBrowse link
G Sftpc surfactant protein C IEP RGD PMID:15640287 RGD:4143401 NCBI chr15:45,596,565...45,599,615
Ensembl chr15:45,596,574...45,610,777
JBrowse link
G Thbs1 thrombospondin 1 acts_upstream_of_or_within ISO MGI:2154534 (MGI:3603989|PMID:16150726) RGD PMID:16150726 MGI:3603989 NCBI chr 3:105,056,286...105,071,445
Ensembl chr 3:105,056,292...105,071,440
JBrowse link
G Tpo thyroid peroxidase IEP RGD PMID:17714035 RGD:7207473 NCBI chr 6:46,698,402...46,768,199
Ensembl chr 6:46,698,414...46,768,199
JBrowse link
G Traf2 Tnf receptor-associated factor 2 acts_upstream_of_or_within ISO (MGI:3837511|PMID:18007661) RGD PMID:18007661 MGI:3837511 NCBI chr 3:8,341,950...8,366,609
Ensembl chr 3:8,341,951...8,366,538
JBrowse link
cellular response to nitrite term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hif1a hypoxia inducible factor 1 subunit alpha IEP RGD PMID:23227543 RGD:9068878 NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha IEP RGD PMID:22892143 RGD:7242065 NCBI chr14:58,860,752...59,516,525
Ensembl chr14:58,861,144...59,512,656
JBrowse link
cellular response to nitrogen dioxide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tnfsf4 TNF superfamily member 4 involved_in ISO (MGI:4943801|PMID:20659336) RGD PMID:20659336 MGI:4943801 NCBI chr13:73,723,329...73,746,809
Ensembl chr13:73,723,329...73,746,788
JBrowse link
cellular response to potassium ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1h calcium voltage-gated channel subunit alpha1 H involved_in ISO (PMID:19342457) RGD PMID:19342457 NCBI chr10:14,390,104...14,448,204
Ensembl chr10:14,390,113...14,448,376
JBrowse link
G Carf calcium responsive transcription factor involved_in ISO
IEA
ISS
(PMID:22174809)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:22174809 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:61,502,368...61,552,433
Ensembl chr 9:61,506,956...61,550,462
JBrowse link
G Crhbp corticotropin releasing hormone binding protein involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:21624661)
UniProt
Ensembl
RGD
PMID:21624661 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:26,692,403...26,704,710
Ensembl chr 2:26,692,403...26,704,710
JBrowse link
G Cyp11b2 cytochrome P450, family 11, subfamily b, polypeptide 2 involved_in ISO (PMID:19342457) RGD PMID:19342457 NCBI chr 7:106,838,590...106,845,004
Ensembl chr 7:106,838,590...106,845,004
JBrowse link
G Cyp11b3 cytochrome P450, family 11, subfamily b, polypeptide 3 involved_in ISO (PMID:19342457) RGD PMID:19342457 NCBI chr 7:106,808,559...106,814,048
Ensembl chr 7:106,808,559...106,814,048
JBrowse link
G Dlg2 discs large MAGUK scaffold protein 2 involved_in ISO (MGI:5703671|PMID:26609151) RGD PMID:26609151 MGI:5703671 NCBI chr 1:144,451,653...146,503,949
Ensembl chr 1:144,451,472...146,499,475
JBrowse link
G Dlg4 discs large MAGUK scaffold protein 4 involved_in ISO (MGI:5703671|PMID:26609151) RGD PMID:26609151 MGI:5703671 NCBI chr10:54,740,700...54,769,097
Ensembl chr10:54,739,470...54,767,153
JBrowse link
G Fmr1 fragile X messenger ribonucleoprotein 1 IEP RGD PMID:15028757 RGD:1300188 NCBI chr  X:147,240,239...147,278,057
Ensembl chr  X:147,240,301...147,278,050
JBrowse link
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 IDA RGD PMID:17298175 RGD:10045993 NCBI chr 7:134,375,318...134,381,610
Ensembl chr 7:134,375,150...134,381,609
JBrowse link
G Hsf1 heat shock transcription factor 1 IEP RGD PMID:24478344 RGD:10402566 NCBI chr 7:108,196,040...108,223,011
Ensembl chr 7:108,196,056...108,223,011
JBrowse link
G Kcnj10 potassium inwardly-rectifying channel, subfamily J, member 10 involved_in ISO MGI:3761690 (MGI:6451360|PMID:31736353) RGD PMID:31736353 MGI:6451360 NCBI chr13:84,802,026...84,835,383
Ensembl chr13:84,802,009...84,835,461
JBrowse link
G Mecp2 methyl CpG binding protein 2 IDA RGD PMID:14593183 RGD:12790707 NCBI chr  X:151,781,177...151,844,687
Ensembl chr  X:151,789,930...151,844,689
JBrowse link
G Mylk myosin light chain kinase acts_upstream_of_or_within ISO (MGI:3805620|PMID:18524939) RGD PMID:18524939 MGI:3805620 NCBI chr11:65,783,008...66,030,239
Ensembl chr11:65,783,008...66,030,261
JBrowse link
G Nek7 NIMA-related kinase 7 involved_in ISO
IEA
ISS
(MGI:5751332|PMID:26814970)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:26814970 GO_REF:0000024 GO_REF:0000107 MGI:5751332 NCBI chr13:50,022,212...50,149,374
Ensembl chr13:50,022,218...50,149,296
JBrowse link
G Nptx1 neuronal pentraxin 1 IDA RGD PMID:22279230 RGD:6903322 NCBI chr10:104,811,107...104,820,358
Ensembl chr10:104,811,403...104,820,367
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha IEP RGD PMID:17870059 RGD:10059655 NCBI chr14:58,860,752...59,516,525
Ensembl chr14:58,861,144...59,512,656
JBrowse link
G Serpine1 serpin family E member 1 IEP RGD PMID:21596853 RGD:8547918 NCBI chr12:19,601,272...19,611,657
Ensembl chr12:19,601,272...19,611,657
JBrowse link
G Slc12a2 solute carrier family 12 member 2 involved_in ISO (MGI:6392919|PMID:11940530) RGD PMID:11940530 MGI:6392919 NCBI chr18:51,348,282...51,416,448
Ensembl chr18:51,348,302...51,416,440
JBrowse link
G Sod1 superoxide dismutase 1 IEP RGD PMID:17403136 RGD:8657024 NCBI chr11:29,456,673...29,462,249
Ensembl chr11:29,456,558...29,462,249
JBrowse link
G Stk39 serine threonine kinase 39 involved_in ISO (MGI:6451360|PMID:31736353) RGD PMID:31736353 MGI:6451360 NCBI chr 3:52,913,583...53,179,060
Ensembl chr 3:52,913,585...53,179,060
JBrowse link
cellular response to selenite ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif4a3 eukaryotic translation initiation factor 4A3 IEP RGD PMID:19716792 RGD:10045552 NCBI chr10:104,549,038...104,559,032
Ensembl chr10:104,549,038...104,559,057
JBrowse link
cellular response to zinc ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Creb1 cAMP responsive element binding protein 1 acts_upstream_of_or_within ISO (MGI:5492261|PMID:23716681) RGD PMID:23716681 MGI:5492261 NCBI chr 9:65,903,511...65,972,562
Ensembl chr 9:65,903,547...65,970,816
JBrowse link
G Gabrb3 gamma-aminobutyric acid type A receptor subunit beta 3 acts_upstream_of_or_within ISO (MGI:6478074|PMID:12183328) RGD PMID:12183328 MGI:6478074 NCBI chr 1:108,467,047...108,702,522
Ensembl chr 1:108,296,124...108,698,961
JBrowse link
G Glra1 glycine receptor, alpha 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:16144831)
UniProt
RGD
PMID:16144831 GO_REF:0000024 NCBI chr10:39,625,853...39,727,897
Ensembl chr10:39,629,459...39,727,162
JBrowse link
G Glra2 glycine receptor, alpha 2 involved_in ISO
IEA
(PMID:23895467)
GO_REF:0000107
RGD
Ensembl
PMID:23895467 GO_REF:0000107 NCBI chr  X:29,020,377...29,241,666
Ensembl chr  X:29,020,557...29,241,666
JBrowse link
G Glra3 glycine receptor, alpha 3 involved_in IDA PMID:23895467 UniProt PMID:23895467 RGD:11035333 NCBI chr16:34,205,431...34,848,332
Ensembl chr16:34,204,811...34,848,753
JBrowse link
G Gpr39 G protein-coupled receptor 39 acts_upstream_of_or_within ISO MGI:3701833 (MGI:5464224|PMID:23133519), (MGI:5707553|PMID:26375174) RGD PMID:23133519 PMID:26375174 MGI:5464224 MGI:5707553 NCBI chr13:37,115,258...37,327,312
Ensembl chr13:37,115,102...37,328,267
JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A IMP RGD PMID:19240037 RGD:2326029 NCBI chr10:5,630,684...6,043,341
Ensembl chr10:5,631,369...6,044,637
JBrowse link
G Hvcn1 hydrogen voltage-gated channel 1 involved_in ISO (PMID:22020278) RGD PMID:22020278 NCBI chr12:34,341,673...34,370,010
Ensembl chr12:34,335,190...34,370,141
JBrowse link
G Kcnk3 potassium two pore domain channel subfamily K member 3 IEP RGD PMID:9437008 RGD:61647 NCBI chr 6:25,761,487...25,799,153
Ensembl chr 6:25,763,228...25,799,153
JBrowse link
G LOC100125598 metallothionein 1a pseudogene involved_in ISO (PMID:11168427), (PMID:15735762), (PMID:3403543), (PMID:7559655), (PMID:8119276) RGD PMID:3403543 PMID:7559655 PMID:8119276 PMID:11168427 PMID:15735762 NCBI chr17:74,786,652...74,787,040
Ensembl chr17:74,786,654...74,787,135
JBrowse link
G Mt1 metallothionein 1 involved_in
acts_upstream_of_or_within
IBA
ISO
ISS
PMID:21873635
(MGI:3820854|PMID:18605988)
GO_REF:0000024
(PMID:11168427)
RGD
UniProt
PMID:11168427 PMID:18605988 PMID:21873635 GO_REF:0000024 MGI:3820854, RGD:13792537 NCBI chr19:10,826,032...10,827,048
Ensembl chr19:10,826,032...10,827,049
JBrowse link
G Mt1m metallothionein 1M involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:3,159,023...3,159,401
Ensembl chr 5:119,728,811...119,730,073
Ensembl chr19:119,728,811...119,730,073
JBrowse link
G Mt2A metallothionein 2A involved_in ISO
ISS
IBA
(PMID:11168427)
GO_REF:0000024
PMID:21873635
RGD
UniProt
PMID:11168427 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr19:10,832,009...10,832,783
Ensembl chr19:10,832,002...10,832,784
JBrowse link
G Mt3 metallothionein 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:10,848,754...10,850,158
Ensembl chr19:10,848,755...10,850,158
JBrowse link
G Mt4 metallothionein 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:10,863,813...10,865,909
Ensembl chr19:10,863,813...10,865,909
JBrowse link
G Mtf1 metal-regulatory transcription factor 1 involved_in ISO (MGI:5577232|PMID:24529376) RGD PMID:24529376 MGI:5577232 NCBI chr 5:137,062,319...137,107,136
Ensembl chr 5:137,062,376...137,107,136
JBrowse link
G P2rx4 purinergic receptor P2X 4 involved_in IDA PMID:8551329 UniProt PMID:8551329 RGD:61682 NCBI chr12:33,844,609...33,862,265
Ensembl chr12:33,844,396...33,862,253
JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 IEP RGD PMID:23582235 RGD:10414068 NCBI chr13:92,307,593...92,339,406
Ensembl chr13:92,307,586...92,339,404
JBrowse link
G Tspo translocator protein IEP RGD PMID:18709649 RGD:2317141 NCBI chr 7:114,720,188...114,730,450
Ensembl chr 7:114,720,188...114,730,450
JBrowse link
G Znf658 zinc finger protein 658 involved_in ISO (PMID:25582195) RGD PMID:25582195
positive regulation of transcription from RNA polymerase II promoter in response to calcium ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Carf calcium responsive transcription factor involved_in IEA
ISO
IDA
GO_REF:0000107
(PMID:11832226), (PMID:22174809)
Ensembl
RGD
PMID:11832226 PMID:22174809 PMID:11832226 GO_REF:0000107, RGD:8553337 NCBI chr 9:61,502,368...61,552,433
Ensembl chr 9:61,506,956...61,550,462
JBrowse link
regulation of cellular response to manganese ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc30a10 solute carrier family 30, member 10 involved_in ISO (PMID:25319704) RGD PMID:25319704 NCBI chr13:96,998,143...97,048,076
Ensembl chr13:96,998,143...97,009,103
JBrowse link
regulation of transcription from RNA polymerase II promoter in response to iron term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmox1 heme oxygenase 1 acts_upstream_of_or_within ISO (MGI:5527134|PMID:23395172) RGD PMID:23395172 MGI:5527134 NCBI chr19:13,466,287...13,474,082
Ensembl chr19:13,467,244...13,474,079
JBrowse link
G Hrg histidine-rich glycoprotein acts_upstream_of_or_within ISO (MGI:5527134|PMID:23395172) RGD PMID:23395172 MGI:5527134 NCBI chr11:78,054,488...78,069,402
Ensembl chr11:78,054,498...78,069,389
JBrowse link
G Slc40a1 solute carrier family 40 member 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5527134|PMID:23395172)
GO_REF:0000107
RGD
Ensembl
PMID:23395172 GO_REF:0000107 MGI:5527134 NCBI chr 9:48,033,526...48,053,876
Ensembl chr 9:48,033,526...48,051,481
JBrowse link
response to manganese-induced endoplasmic reticulum stress term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf4 activating transcription factor 4 involved_in IEP PMID:23934647 ParkinsonsUK-UCL PMID:23934647 RGD:10047151 NCBI chr 7:111,804,135...111,806,457
Ensembl chr 7:111,804,183...111,806,446
JBrowse link
G Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 involved_in IEP PMID:23934647 ParkinsonsUK-UCL PMID:23934647 RGD:10047151 NCBI chr 4:102,805,495...102,866,914
Ensembl chr 4:102,805,510...102,866,911
JBrowse link
G Eif2s1 eukaryotic translation initiation factor 2 subunit alpha involved_in IEP PMID:23934647 ParkinsonsUK-UCL PMID:23934647 RGD:10047151 NCBI chr 6:97,672,829...97,697,499
Ensembl chr 6:97,672,766...97,706,225
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18737
    response to stimulus 10209
      response to chemical 6156
        response to inorganic substance 860
          cellular response to inorganic substance 337
            cellular response to azide 1
            cellular response to bismuth 0
            cellular response to carbon dioxide 2
            cellular response to carbon monoxide 2
            cellular response to chlorate 0
            cellular response to chromate 2
            cellular response to hydroxyurea 13
            cellular response to metal ion + 258
            cellular response to nitrate 0
            cellular response to nitric oxide 24
            cellular response to nitrite 2
            cellular response to nitrogen dioxide 1
            cellular response to selenite ion 1
            cellular response to silicon dioxide 0
            cellular response to sulfur dioxide 0
paths to the root