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ONTOLOGY REPORT - ANNOTATIONS

Term:cellular response to acid chemical
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Accession:GO:0071229 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by the chemical structure of the anion portion of the dissociated acid (rather than the acid acting as a proton donor). The acid chemical may be in gaseous, liquid or solid form.
Comment:This term should be used to describe a response to a specific acid as a chemical. E.g., if a cell were responding to glutamate, then the response would be glutamate-specific; the cell is actually responding to the chemical structure of the anion portion of the dissociated acid. Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC. If annotating experiments where an acid is playing a role as a proton donor, please annotate to GO:0071468 'cellular response to acidic pH' instead.
Synonyms:broad_synonym: cellular response to acid
 related_synonym: cellular response to acid anion;   cellular response to oxoanion

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cellular response to 3,3',5-triiodo-L-thyronine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dync1h1 dynein cytoplasmic 1 heavy chain 1 ISO RGD PMID:8922673 RGD:13207348 NCBI chrNW_004936835:225,879...290,160
Ensembl chrNW_004936835:225,324...289,954 		JBrowse link
G LOC101972165 myosin-7 ISO RGD PMID:17111039 RGD:12792968 NCBI chrNW_004936722:967,443...991,530
Ensembl chrNW_004936722:969,384...991,129 		JBrowse link
G Pnpla3 patatin like phospholipase domain containing 3 ISO RGD PMID:19619606 RGD:14985223 NCBI chrNW_004936718:1,620,034...1,638,315
Ensembl chrNW_004936718:1,619,948...1,638,317 		JBrowse link
G Six1 SIX homeobox 1 ISO RGD PMID:22197309 RGD:11561984 NCBI chrNW_004936495:4,839,496...4,842,906
Ensembl chrNW_004936495:4,838,051...4,842,994 		JBrowse link
cellular response to amino acid stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ass1 argininosuccinate synthase 1 ISO glutamine RGD PMID:9893939 RGD:4142787 NCBI chrNW_004936487:17,482,307...17,527,407
Ensembl chrNW_004936487:17,486,826...17,527,435 		JBrowse link
G Atp7a ATPase copper transporting alpha ISO homocysteine RGD PMID:26722473 RGD:11341663 NCBI chrNW_004936683:2,874,022...2,936,214
Ensembl chrNW_004936683:2,874,042...2,935,040 		JBrowse link
G Bcl2l1 BCL2 like 1 acts_upstream_of_or_within ISO (PMID:15231831) MGI PMID:15231831 NCBI chrNW_004936485:18,654,046...18,707,324 JBrowse link
G Capn2 calpain 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936526:879,765...932,682
Ensembl chrNW_004936526:879,765...932,682 		JBrowse link
G Ccl5 C-C motif chemokine ligand 5 ISO RGD PMID:20560880 RGD:4889887 NCBI chrNW_004936490:253,279...259,947
Ensembl chrNW_004936490:253,034...259,965 		JBrowse link
G Cdh1 cadherin 1 acts_upstream_of_or_within ISO (PMID:20548288) MGI PMID:20548288 NCBI chrNW_004936475:18,990,529...19,065,954
Ensembl chrNW_004936475:18,990,474...19,067,203 		JBrowse link
G Col16a1 collagen type XVI alpha 1 chain acts_upstream_of_or_within ISO (PMID:20548288) MGI PMID:20548288 NCBI chrNW_004936474:14,769,029...14,817,342 JBrowse link
G Col1a1 collagen type I alpha 1 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20548288) Ensembl
MGI		 PMID:20548288 GO_REF:0000107 NCBI chrNW_004936490:11,448,552...11,465,836
Ensembl chrNW_004936490:11,448,654...11,464,444 		JBrowse link
G Col1a2 collagen type I alpha 2 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20548288) Ensembl
MGI		 PMID:20548288 GO_REF:0000107 NCBI chrNW_004936585:5,650,322...5,686,393
Ensembl chrNW_004936585:5,651,180...5,685,923 		JBrowse link
G Col3a1 collagen type III alpha 1 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20548288) Ensembl
MGI		 PMID:20548288 GO_REF:0000107 NCBI chrNW_004936506:8,886,494...8,923,921
Ensembl chrNW_004936506:8,886,494...8,923,930 		JBrowse link
G Col4a1 collagen type IV alpha 1 chain acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:20548288) MGI
Ensembl		 PMID:20548288 GO_REF:0000107 NCBI chrNW_004936472:2,416,043...2,543,561
Ensembl chrNW_004936472:2,416,566...2,542,814 		JBrowse link
G Col4a6 collagen type IV alpha 6 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20548288) Ensembl
MGI		 PMID:20548288 GO_REF:0000107 NCBI chrNW_004936499:6,421,930...6,640,429
Ensembl chrNW_004936499:6,362,295...6,639,047 		JBrowse link
G Col5a2 collagen type V alpha 2 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20548288) Ensembl
MGI		 PMID:20548288 GO_REF:0000107 NCBI chrNW_004936506:8,739,475...8,873,073
Ensembl chrNW_004936506:8,822,517...8,870,836 		JBrowse link
G Col6a1 collagen type VI alpha 1 chain acts_upstream_of_or_within ISO (PMID:20548288) MGI PMID:20548288 NCBI chrNW_004936778:515,600...530,828 JBrowse link
G Cpeb1 cytoplasmic polyadenylation element binding protein 1 involved_in ISO (PMID:20937770) UniProt PMID:20937770 NCBI chrNW_004936483:17,216,288...17,296,430
Ensembl chrNW_004936483:17,216,213...17,294,534 		JBrowse link
G Cpeb3 cytoplasmic polyadenylation element binding protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936601:2,470,021...2,616,451
Ensembl chrNW_004936601:2,470,036...2,610,942 		JBrowse link
G Cpeb4 cytoplasmic polyadenylation element binding protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936609:1,793,027...1,858,586
Ensembl chrNW_004936609:1,793,027...1,858,597 		JBrowse link
G Cul3 cullin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936569:6,067,230...6,131,467
Ensembl chrNW_004936569:6,065,367...6,132,316 		JBrowse link
G Dnmt1 DNA methyltransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20548288) Ensembl
MGI		 PMID:20548288 GO_REF:0000107 NCBI chrNW_004936659:520,181...565,496
Ensembl chrNW_004936659:520,493...565,416 		JBrowse link
G Dnmt3a DNA methyltransferase 3 alpha acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:20548288) MGI
Ensembl		 PMID:20548288 GO_REF:0000107 NCBI chrNW_004936493:6,963,406...7,013,256
Ensembl chrNW_004936493:6,935,386...7,007,610 		JBrowse link
G Dnmt3b DNA methyltransferase 3 beta acts_upstream_of_or_within ISO (PMID:20548288) MGI PMID:20548288 NCBI chrNW_004936485:19,547,836...19,570,716 JBrowse link
G Egfr epidermal growth factor receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936678:365,005...560,546
Ensembl chrNW_004936678:365,834...436,528 		JBrowse link
G Glra1 glycine receptor alpha 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936515:10,816,712...10,896,958
Ensembl chrNW_004936515:10,817,422...10,896,958 		JBrowse link
G Glra2 glycine receptor alpha 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:4,014,897...4,202,625
Ensembl chrNW_004936470:4,014,885...4,202,633 		JBrowse link
G Glra3 glycine receptor alpha 3 involved_in ISO PMID:23895467 UniProt PMID:23895467 RGD:11035333 NCBI chrNW_004936516:5,692,535...5,855,694
Ensembl chrNW_004936516:5,693,894...5,855,755 		JBrowse link
G Gria1 glutamate ionotropic receptor AMPA type subunit 1 ISO glutamate RGD PMID:19913087 RGD:4107720 NCBI chrNW_004936515:8,937,391...9,236,438
Ensembl chrNW_004936515:8,940,009...9,083,151 		JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A ISO glycine RGD PMID:19154422 RGD:2326036 NCBI chrNW_004936530:8,286,101...8,612,183
Ensembl chrNW_004936530:8,287,574...8,608,343 		JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B ISO N-methyl-d-aspartate
glutamate, N-methyl-D-aspartate		 RGD PMID:20336776 PMID:20526740 RGD:2325861 RGD:4107019 NCBI chrNW_004936587:3,406,055...3,806,956
Ensembl chrNW_004936587:3,405,698...3,804,664 		JBrowse link
G Hmgcs2 3-hydroxy-3-methylglutaryl-CoA synthase 2 ISO carnitine RGD PMID:20508999 RGD:2326106 NCBI chrNW_004936627:4,451,847...4,473,163
Ensembl chrNW_004936627:4,451,823...4,473,223 		JBrowse link
G Hnrnpab heterogeneous nuclear ribonucleoprotein A/B ISO NMDA, AMPA RGD PMID:21471000 RGD:9999187 NCBI chrNW_004936647:478,445...520,361
Ensembl chrNW_004936647:478,443...484,570 		JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D ISO N-methyl-D-aspartate RGD PMID:16569663 RGD:10042967 NCBI chrNW_004936738:2,096,370...2,115,135
Ensembl chrNW_004936738:2,096,370...2,113,604 		JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K ISO glycine RGD PMID:24990929 RGD:10002784 NCBI chrNW_004936828:827,660...839,088
Ensembl chrNW_004936828:828,837...838,720 		JBrowse link
G Hsf1 heat shock transcription factor 1 ISO homocysteic acid
glutamine, ornithine		 RGD PMID:21512157 PMID:24478344 RGD:10402566 RGD:10402944 NCBI chrNW_004936470:7,927,734...7,950,805
Ensembl chrNW_004936470:7,928,095...7,933,337 		JBrowse link
G Ipo5 importin 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936472:12,231,970...12,271,639
Ensembl chrNW_004936472:12,229,922...12,271,964 		JBrowse link
G Klhl22 kelch like family member 22 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936619:2,854,915...2,899,386
Ensembl chrNW_004936619:2,854,803...2,899,460 		JBrowse link
G Lamtor1 late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936498:1,446,794...1,459,590
Ensembl chrNW_004936498:1,442,754...1,459,673 		JBrowse link
G Lamtor2 late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936580:5,316,748...5,320,364
Ensembl chrNW_004936580:5,316,616...5,322,158 		JBrowse link
G Lamtor3 late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936520:3,113,178...3,128,333
Ensembl chrNW_004936520:3,113,235...3,128,333 		JBrowse link
G Lamtor4 late endosomal/lysosomal adaptor, MAPK and MTOR activator 4 involved_in IEA Ensembl
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936543:408,345...411,723
Ensembl chrNW_004936543:408,363...411,723 		JBrowse link
G Lamtor5 late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 involved_in ISO (PMID:22980980) ComplexPortal PMID:22980980 NCBI chrNW_004936704:1,830,470...1,835,966
Ensembl chrNW_004936704:1,830,470...1,835,994 		JBrowse link
G Lars1 leucyl-tRNA synthetase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936504:8,500,024...8,568,477
Ensembl chrNW_004936504:8,499,978...8,570,715 		JBrowse link
G LOC101957150 stromelysin-1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936551:5,137,801...5,145,934
Ensembl chrNW_004936551:5,137,801...5,145,934 		JBrowse link
G LOC101966517 ragulator complex protein LAMTOR5 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936499:8,181,385...8,181,760 JBrowse link
G LOC101967032 cytochrome b-245 light chain ISO RGD PMID:12241540 RGD:2291907 NCBI chrNW_004936641:1,036,967...1,044,954
Ensembl chrNW_004936641:1,036,967...1,044,991 		JBrowse link
G LOC120884463 ragulator complex protein LAMTOR5-like involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118
G Mmp2 matrix metallopeptidase 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:20548288) MGI
Ensembl		 PMID:20548288 GO_REF:0000107 NCBI chrNW_004936475:7,801,356...7,825,831
Ensembl chrNW_004936475:7,801,277...7,825,851 		JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:158,376...282,310
Ensembl chrNW_004936474:157,590...282,342 		JBrowse link
G Neurl1 neuralized E3 ubiquitin protein ligase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936600:2,518,193...2,590,336
Ensembl chrNW_004936600:2,518,265...2,590,344 		JBrowse link
G Nsmf NMDA receptor synaptonuclear signaling and neuronal migration factor involved_in ISO PMID:18303947 UniProt PMID:18303947 RGD:8553324 NCBI chrNW_004936669:606,392...614,748
Ensembl chrNW_004936669:606,299...615,834 		JBrowse link
G Ntrk2 neurotrophic receptor tyrosine kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25542970) Ensembl
MGI		 PMID:25542970 GO_REF:0000107 NCBI chrNW_004936680:267,850...621,467
Ensembl chrNW_004936680:267,596...615,928 		JBrowse link
G Pdgfc platelet derived growth factor C involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20548288) Ensembl
MGI		 PMID:20548288 GO_REF:0000107 NCBI chrNW_004936576:3,357,399...3,555,828
Ensembl chrNW_004936576:3,357,424...3,554,890 		JBrowse link
G Pdgfd platelet derived growth factor D acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:20548288) MGI
Ensembl		 PMID:20548288 GO_REF:0000107 NCBI chrNW_004936551:3,974,140...4,197,852
Ensembl chrNW_004936551:3,974,104...4,198,927 		JBrowse link
G Pdgfra platelet derived growth factor receptor alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20548288) Ensembl
MGI		 PMID:20548288 GO_REF:0000107 NCBI chrNW_004936482:16,804,129...16,853,539
Ensembl chrNW_004936482:16,807,569...16,853,587 		JBrowse link
G Rbx1 ring-box 1 involved_in ISO (PMID:29769719) UniProt PMID:29769719 NCBI chrNW_004936492:872,316...890,860
Ensembl chrNW_004936492:873,576...890,835 		JBrowse link
G Rptor regulatory associated protein of MTOR complex 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936594:4,427,225...4,758,081
Ensembl chrNW_004936594:4,427,169...4,760,120 		JBrowse link
G Rraga Ras related GTP binding A involved_in ISO (PMID:20381137) UniProt PMID:20381137 NCBI chrNW_004936652:991,832...993,439 JBrowse link
G Rragb Ras related GTP binding B involved_in IEA Ensembl
UniProt		 GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004936819:946,874...988,531
Ensembl chrNW_004936819:955,527...988,644 		JBrowse link
G Rragc Ras related GTP binding C involved_in IEA UniProt GO_REF:0000104
G Rragd Ras related GTP binding D involved_in IEA UniProt GO_REF:0000104 NCBI chrNW_004936510:2,810,028...2,849,792
Ensembl chrNW_004936510:2,810,022...2,853,306 		JBrowse link
G Sesn1 sestrin 1 involved_in ISO (PMID:25259925) UniProt PMID:25259925 NCBI chrNW_004936564:5,187,152...5,291,201
Ensembl chrNW_004936564:5,187,005...5,291,498 		JBrowse link
G Sesn2 sestrin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:12,416,652...12,436,799
Ensembl chrNW_004936474:12,416,652...12,436,814 		JBrowse link
G Sesn3 sestrin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936700:2,429,535...2,491,752
Ensembl chrNW_004936700:2,429,446...2,488,127 		JBrowse link
G Sh3bp4 SH3 domain binding protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936525:2,693,828...2,757,480
Ensembl chrNW_004936525:2,692,786...2,707,177 		JBrowse link
G Slc38a9 solute carrier family 38 member 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936480:12,103,697...12,198,592
Ensembl chrNW_004936480:12,103,693...12,195,358 		JBrowse link
G Slc7a5 solute carrier family 7 member 5 ISO RGD PMID:9882595 RGD:151357002 NCBI chrNW_004936641:1,513,110...1,538,955 JBrowse link
G Socs1 suppressor of cytokine signaling 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20548288) Ensembl
MGI		 PMID:20548288 GO_REF:0000107 NCBI chrNW_004936530:9,312,965...9,315,593
Ensembl chrNW_004936530:9,312,965...9,316,165 		JBrowse link
G Spaar small regulatory polypeptide of amino acid response involved_in ISO (PMID:28024296) UniProt PMID:28024296
G Tnf tumor necrosis factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20548288) Ensembl
MGI		 PMID:20548288 GO_REF:0000107 NCBI chrNW_004936727:1,936,066...1,937,766
Ensembl chrNW_004936727:1,936,066...1,937,766 		JBrowse link
G Xbp1 X-box binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936657:2,891,171...2,895,409
Ensembl chrNW_004936657:2,891,907...2,896,174 		JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20548288) Ensembl
MGI		 PMID:20548288 GO_REF:0000107 NCBI chrNW_004936574:17,643...175,762
Ensembl chrNW_004936574:17,684...178,293 		JBrowse link
cellular response to glycine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agap2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 2 ISO RGD PMID:21847098 RGD:8553599 NCBI chrNW_004936646:1,865,154...1,881,614
Ensembl chrNW_004936646:1,865,395...1,876,453 		JBrowse link
G Fyn FYN proto-oncogene, Src family tyrosine kinase involved_in ISO PMID:17526495 ARUK-UCL PMID:17526495 RGD:13506268 NCBI chrNW_004936679:388,500...588,518
Ensembl chrNW_004936679:387,387...443,880 		JBrowse link
G Gria2 glutamate ionotropic receptor AMPA type subunit 2 ISO RGD PMID:21847098 RGD:8553599 NCBI chrNW_004936576:3,800,369...3,940,324
Ensembl chrNW_004936576:3,800,075...3,941,003 		JBrowse link
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 ISO RGD PMID:23678131 RGD:401940177 NCBI chrNW_004936669:814,330...838,881
Ensembl chrNW_004936669:814,330...839,208 		JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A ISO RGD PMID:23678131 RGD:401940177 NCBI chrNW_004936530:8,286,101...8,612,183
Ensembl chrNW_004936530:8,287,574...8,608,343 		JBrowse link
G Grin3b glutamate ionotropic receptor NMDA type subunit 3B ISO RGD PMID:11823786 RGD:632842 NCBI chrNW_004936588:433,544...440,534
Ensembl chrNW_004936588:433,261...444,237 		JBrowse link
G Myo5b myosin VB ISO RGD PMID:18984164 RGD:11533643 NCBI chrNW_004936497:12,932,367...13,236,916
Ensembl chrNW_004936497:12,932,789...13,234,244 		JBrowse link
cellular response to homocysteine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Camk2b calcium/calmodulin dependent protein kinase II beta ISO RGD PMID:25126162 RGD:13681928 NCBI chrNW_004936478:19,183,493...19,278,457
Ensembl chrNW_004936478:19,180,726...19,278,920 		JBrowse link
G Pla2g4a phospholipase A2 group IVA ISO RGD PMID:31125437 RGD:401940166 NCBI chrNW_004936481:3,559,377...3,689,797
Ensembl chrNW_004936481:3,559,358...3,689,833 		JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 ISO RGD PMID:31125437 RGD:401940166 NCBI chrNW_004936481:3,821,564...3,828,086 JBrowse link
cellular response to hydrostatic pressure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fas Fas cell surface death receptor ISO RGD PMID:16226958 RGD:8686427 NCBI chrNW_004936735:209,369...234,582 JBrowse link
G LOC101954950 aromatase ISO RGD PMID:21047944 RGD:4890042 NCBI chrNW_004936471:13,107,603...13,136,910
Ensembl chrNW_004936471:13,107,603...13,136,910 		JBrowse link
G LOC101957084 plectin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:8,194,124...8,252,139
Ensembl chrNW_004936470:8,216,205...8,250,978 		JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:22644739 RGD:7240524 NCBI chrNW_004936470:20,480,844...20,485,955
Ensembl chrNW_004936470:20,480,829...20,485,965 		JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936566:3,924,013...3,951,052
Ensembl chrNW_004936566:3,923,934...3,951,073 		JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in ISO (PMID:16025301) BHF-UCL PMID:16025301 NCBI chrNW_004936905:76,781...128,995 JBrowse link
G Sncg synuclein gamma ISO RGD PMID:11933054 RGD:6480100 NCBI chrNW_004936804:16,869...21,684
Ensembl chrNW_004936804:16,614...21,969 		JBrowse link
G Wnt10b Wnt family member 10B ISO RGD PMID:19118527 RGD:2326236 NCBI chrNW_004936512:6,768,240...6,774,172
Ensembl chrNW_004936512:6,768,240...6,774,172 		JBrowse link
G Wnt4 Wnt family member 4 ISO RGD PMID:19118527 RGD:2326236 NCBI chrNW_004936474:7,623,462...7,635,416
Ensembl chrNW_004936474:7,623,463...7,635,664 		JBrowse link
cellular response to kainic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epor erythropoietin receptor ISO RGD PMID:18711747 RGD:11041671 NCBI chrNW_004936659:1,468,391...1,473,880
Ensembl chrNW_004936659:1,468,634...1,473,880 		JBrowse link
cellular response to L-arginine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Castor1 cytosolic arginine sensor for mTORC1 subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936904:372,609...376,878
Ensembl chrNW_004936904:373,198...376,370 		JBrowse link
G Slc7a5 solute carrier family 7 member 5 ISO RGD PMID:10681508 RGD:151361135 NCBI chrNW_004936641:1,513,110...1,538,955 JBrowse link
cellular response to L-dopa term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101973720 rap guanine nucleotide exchange factor 3 ISO RGD PMID:25044243 RGD:10041045 NCBI chrNW_004936512:5,636,197...5,659,606
Ensembl chrNW_004936512:5,636,758...5,659,300
Ensembl chrNW_004936512:5,636,758...5,659,300 		JBrowse link
cellular response to L-glutamate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb1 ATP binding cassette subfamily B member 1 ISO RGD PMID:25962137 RGD:11041133 NCBI chrNW_004936763:1,225,355...1,308,257
Ensembl chrNW_004936763:1,226,482...1,297,427 		JBrowse link
G Amigo1 adhesion molecule with Ig like domain 1 ISO RGD PMID:22056818 RGD:14390155 NCBI chrNW_004936704:992,858...998,200
Ensembl chrNW_004936704:991,306...998,198 		JBrowse link
G Atp5mc1 ATP synthase membrane subunit c locus 1 ISO RGD PMID:28777375 RGD:13800748 NCBI chrNW_004936490:12,549,045...12,551,895
Ensembl chrNW_004936490:12,548,813...12,552,278 		JBrowse link
G Baiap2 BAR/IMD domain containing adaptor protein 2 ISO RGD PMID:15758177 RGD:9684984 NCBI chrNW_004936594:4,797,068...4,863,409
Ensembl chrNW_004936594:4,797,018...4,865,327 		JBrowse link
G Bcl11a BCL11 transcription factor A ISO RGD PMID:20534004 RGD:11100020 NCBI chrNW_004936491:6,021,340...6,118,103
Ensembl chrNW_004936491:6,021,343...6,118,568 		JBrowse link
G Erbb4 erb-b2 receptor tyrosine kinase 4 ISO RGD PMID:28350885 RGD:405649727 NCBI chrNW_004936586:4,065,767...5,100,690
Ensembl chrNW_004936586:4,066,498...5,100,035 		JBrowse link
G Fmr1 Fragile X messenger ribonucleoprotein 1 ISO RGD PMID:22817682 RGD:11566024 NCBI chrNW_004936513:1,290,038...1,327,850
Ensembl chrNW_004936513:1,289,558...1,327,856 		JBrowse link
G Fyn FYN proto-oncogene, Src family tyrosine kinase involved_in ISO PMID:17526495 ARUK-UCL PMID:17526495 RGD:13506268 NCBI chrNW_004936679:388,500...588,518
Ensembl chrNW_004936679:387,387...443,880 		JBrowse link
G Gria1 glutamate ionotropic receptor AMPA type subunit 1 ISO RGD PMID:12390532 RGD:405649864 NCBI chrNW_004936515:8,937,391...9,236,438
Ensembl chrNW_004936515:8,940,009...9,083,151 		JBrowse link
G Grin2d glutamate ionotropic receptor NMDA type subunit 2D ISO RGD PMID:15107472 RGD:1642397 NCBI chrNW_004936664:2,512,777...2,546,865
Ensembl chrNW_004936664:2,515,928...2,546,429 		JBrowse link
G Hpca hippocalcin ISO RGD PMID:20704590 RGD:9686447 NCBI chrNW_004936474:15,786,171...15,794,830
Ensembl chrNW_004936474:15,785,879...15,798,740 		JBrowse link
G Lmnb1 lamin B1 ISO RGD PMID:21389115 RGD:10044247 NCBI chrNW_004936504:157,459...211,916
Ensembl chrNW_004936504:157,453...211,967 		JBrowse link
G LOC101956249 optineurin ISO RGD PMID:28761318 RGD:13432138 NCBI chrNW_004936862:488,591...516,819 JBrowse link
G Mfn2 mitofusin 2 ISO RGD PMID:25416777 RGD:13204765 NCBI chrNW_004936474:767,754...795,258
Ensembl chrNW_004936474:767,671...796,556 		JBrowse link
G Nrg1 neuregulin 1 ISO RGD PMID:28350885 RGD:405649727 NCBI chrNW_004936766:1,104,841...1,306,368
Ensembl chrNW_004936766:1,104,728...1,305,972 		JBrowse link
G Opa1 OPA1 mitochondrial dynamin like GTPase ISO RGD PMID:28761318 RGD:13432138 NCBI chrNW_004936711:1,027,531...1,113,796
Ensembl chrNW_004936711:1,032,935...1,106,847 		JBrowse link
G Pcp4 Purkinje cell protein 4 ISO RGD PMID:18502590 RGD:9850275 NCBI chrNW_004936500:3,416,840...3,468,893
Ensembl chrNW_004936500:3,416,797...3,469,053 		JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase ISO RGD PMID:25478815 RGD:13204761 NCBI chrNW_004936489:12,118,538...12,913,664
Ensembl chrNW_004936489:12,120,678...13,327,872 		JBrowse link
cellular response to L-glutamine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hsf1 heat shock transcription factor 1 ISO RGD PMID:23055521 PMID:23185570 RGD:10450472 RGD:10450473 NCBI chrNW_004936470:7,927,734...7,950,805
Ensembl chrNW_004936470:7,928,095...7,933,337 		JBrowse link
G LOC101966992 cytochrome b-245 heavy chain ISO RGD PMID:12241540 RGD:2291907 NCBI chrNW_004936502:4,631,750...4,676,686
Ensembl chrNW_004936502:4,635,149...4,676,904 		JBrowse link
G LOC101967032 cytochrome b-245 light chain ISO RGD PMID:12241540 RGD:2291907 NCBI chrNW_004936641:1,036,967...1,044,954
Ensembl chrNW_004936641:1,036,967...1,044,991 		JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase ISO RGD PMID:28761318 RGD:13432138 NCBI chrNW_004936489:12,118,538...12,913,664
Ensembl chrNW_004936489:12,120,678...13,327,872 		JBrowse link
cellular response to L-leucine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ep300 E1A binding protein p300 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:696,982...778,132
Ensembl chrNW_004936492:696,960...778,138 		JBrowse link
G Hnf1a HNF1 homeobox A ISO RGD PMID:21874357 RGD:150540304 NCBI chrNW_004936668:62,103...81,549
Ensembl chrNW_004936668:67,535...81,505 		JBrowse link
G Klhl22 kelch like family member 22 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936619:2,854,915...2,899,386
Ensembl chrNW_004936619:2,854,803...2,899,460 		JBrowse link
G Lars1 leucyl-tRNA synthetase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936504:8,500,024...8,568,477
Ensembl chrNW_004936504:8,499,978...8,570,715 		JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:158,376...282,310
Ensembl chrNW_004936474:157,590...282,342 		JBrowse link
G Rptor regulatory associated protein of MTOR complex 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936594:4,427,225...4,758,081
Ensembl chrNW_004936594:4,427,169...4,760,120 		JBrowse link
G Rragd Ras related GTP binding D involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936510:2,810,028...2,849,792
Ensembl chrNW_004936510:2,810,022...2,853,306 		JBrowse link
G Sesn1 sestrin 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936564:5,187,152...5,291,201
Ensembl chrNW_004936564:5,187,005...5,291,498 		JBrowse link
G Sesn2 sestrin 2 involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936474:12,416,652...12,436,799
Ensembl chrNW_004936474:12,416,652...12,436,814 		JBrowse link
G Sesn3 sestrin 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936700:2,429,535...2,491,752
Ensembl chrNW_004936700:2,429,446...2,488,127 		JBrowse link
G Stambpl1 STAM binding protein like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936735:293,833...337,839
Ensembl chrNW_004936735:293,833...310,539 		JBrowse link
G Ubr1 ubiquitin protein ligase E3 component n-recognin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:6,171,655...6,313,853
Ensembl chrNW_004936471:6,171,593...6,313,937 		JBrowse link
G Ubr2 ubiquitin protein ligase E3 component n-recognin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:17,178,981...17,322,600
Ensembl chrNW_004936476:17,181,214...17,322,163 		JBrowse link
cellular response to methionine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmt2 base methyltransferase of 25S rRNA 2 homolog involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936589:5,578,566...5,657,093
Ensembl chrNW_004936589:5,578,519...5,659,400 		JBrowse link
G Mapk1 mitogen-activated protein kinase 1 ISO RGD PMID:22676582 RGD:405100711 NCBI chrNW_004936619:1,889,841...1,932,646
Ensembl chrNW_004936619:1,889,708...1,932,646 		JBrowse link
G Mat2a methionine adenosyltransferase 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936712:1,710,513...1,717,339
Ensembl chrNW_004936712:1,709,716...1,717,499 		JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:158,376...282,310
Ensembl chrNW_004936474:157,590...282,342 		JBrowse link
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase ISO RGD PMID:1201245 RGD:6893692 NCBI chrNW_004936484:16,087,924...16,180,089
Ensembl chrNW_004936484:16,087,923...16,180,148 		JBrowse link
G Nfe2l2 NFE2 like bZIP transcription factor 2 ISO RGD PMID:22676582 RGD:405100711 NCBI chrNW_004936509:6,589,967...6,621,171
Ensembl chrNW_004936509:6,590,630...6,620,262 		JBrowse link
G Prmt1 protein arginine methyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936664:3,492,032...3,502,738
Ensembl chrNW_004936664:3,491,920...3,504,667 		JBrowse link
cellular response to phenylalanine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fas Fas cell surface death receptor ISO RGD PMID:23940767 RGD:8663468 NCBI chrNW_004936735:209,369...234,582 JBrowse link
cellular response to thyroxine stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gclc glutamate-cysteine ligase catalytic subunit ISO RGD PMID:17291985 RGD:10402376 NCBI chrNW_004936476:7,371,270...7,418,756
Ensembl chrNW_004936476:7,371,149...7,418,958 		JBrowse link
G L1cam L1 cell adhesion molecule ISO RGD PMID:11085884 RGD:11570514 NCBI chrNW_004936809:736,385...768,822
Ensembl chrNW_004936809:736,319...761,973 		JBrowse link
G LOC101977655 glutamate--cysteine ligase regulatory subunit ISO RGD PMID:17291985 RGD:10402376 NCBI chrNW_004936537:5,356,914...5,378,998 JBrowse link
cellular response to water deprivation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp2 aquaporin 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:10191086) RGD
MGI
Ensembl		 PMID:10191086 PMID:15196935 GO_REF:0000107 RGD:2313141 NCBI chrNW_004936512:7,628,677...7,633,344
Ensembl chrNW_004936512:7,628,495...7,634,107 		JBrowse link
G Avpr1a arginine vasopressin receptor 1A ISO RGD PMID:11796498 RGD:70387 NCBI chrNW_004936545:1,788,995...1,795,842
Ensembl chrNW_004936545:1,786,571...1,794,709 		JBrowse link
G Sipa1 signal-induced proliferation-associated 1 ISO RGD PMID:15196935 RGD:2313141 NCBI chrNW_004936599:3,813,350...3,825,319
Ensembl chrNW_004936599:3,813,596...3,822,170 		JBrowse link
cellular stress response to acid chemical term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vegfa vascular endothelial growth factor A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:16,245,134...16,261,180
Ensembl chrNW_004936476:16,247,100...16,260,673 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16037
    response to stimulus 8593
      response to chemical 4619
        response to acid chemical 228
          cellular response to acid chemical 130
            cellular response to amino acid stimulus + 118
            cellular response to water stimulus + 12
            cellular stress response to acid chemical 1
paths to the root