ONTOLOGY REPORT - ANNOTATIONS
Term: cellular response to acid chemical
Accession: GO:0071229
browse the term
Definition: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by the chemical structure of the anion portion of the dissociated acid (rather than the acid acting as a proton donor). The acid chemical may be in gaseous, liquid or solid form.
Comment: This term should be used to describe a response to a specific acid as a chemical. E.g., if a cell were responding to glutamate, then the response would be glutamate-specific; the cell is actually responding to the chemical structure of the anion portion of the dissociated acid. Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC. If annotating experiments where an acid is playing a role as a proton donor, please annotate to GO:0071468 'cellular response to acidic pH' instead.
Synonyms: broad_synonym: cellular response to acid
related_synonym: cellular response to acid anion; cellular response to oxoanion
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DYNC1H1
dynein cytoplasmic 1 heavy chain 1
ISO
RGD
PMID:8922673
RGD:13207348
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LOC100736765
myosin-6
ISO
RGD
PMID:17111039
RGD:12792968
NCBI chr 7:75,677,666...75,704,486
Ensembl chr 7:75,676,791...75,704,644
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PNPLA3
patatin like phospholipase domain containing 3
ISO
RGD
PMID:19619606
RGD:14985223
NCBI chr 5:5,075,608...5,092,599
Ensembl chr 5:5,075,622...5,092,515
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SIX1
SIX homeobox 1
ISO
RGD
PMID:22197309
RGD:11561984
NCBI chr 1:189,620,430...189,624,652
Ensembl chr 1:189,619,855...189,624,651
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ASS1
argininosuccinate synthase 1
ISO
glutamine
RGD
PMID:9893939
RGD:4142787
NCBI chr 1:270,531,434...270,586,364
Ensembl chr 1:270,531,589...270,586,364
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ATP7A
ATPase copper transporting alpha
ISO
homocysteine
RGD
PMID:26722473
RGD:11341663
NCBI chr X:61,972,544...62,110,058
Ensembl chr X:61,972,991...62,110,048
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BCL2L1
BCL2 like 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:15231831)
Ensembl MGI
PMID:15231831
GO_REF:0000107
NCBI chr17:35,366,139...35,415,798
Ensembl chr17:35,366,143...35,414,694
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BCL2L2
BCL2 like 2
ISO
RGD
PMID:11090983
RGD:14394513
NCBI chr 7:75,765,603...75,770,743
Ensembl chr 7:75,763,078...75,769,763
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CAPN2
calpain 2
involved_in
IEA ISS
Ensembl UniProt
GO_REF:0000024 GO_REF:0000107
NCBI chr10:19,758,824...19,820,241
Ensembl chr10:19,758,757...19,820,246
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CCL5
C-C motif chemokine ligand 5
ISO
RGD
PMID:20560880
RGD:4889887
NCBI chr12:39,652,731...39,659,121
Ensembl chr12:39,648,598...39,659,118
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CDH1
cadherin 1
acts_upstream_of_or_within
ISO
(PMID:20548288)
MGI
PMID:20548288
NCBI chr 6:18,075,487...18,155,986
Ensembl chr 6:18,075,480...18,155,986
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CEBPB
CCAAT enhancer binding protein beta
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:20548288)
Ensembl MGI
PMID:20548288
GO_REF:0000107
NCBI chr17:51,722,633...51,723,673
Ensembl chr17:51,722,426...51,724,305
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COL16A1
collagen type XVI alpha 1 chain
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:20548288)
Ensembl MGI
PMID:20548288
GO_REF:0000107
NCBI chr 6:88,177,798...88,243,718
Ensembl chr 6:88,177,816...88,242,747
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COL1A1
collagen type I alpha 1 chain
acts_upstream_of_or_within
ISO
(PMID:20548288)
MGI
PMID:20548288
NCBI chr12:26,379,087...26,397,180
Ensembl chr12:26,379,090...26,397,004
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COL1A2
collagen type I alpha 2 chain
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:20548288)
Ensembl MGI
PMID:20548288
GO_REF:0000107
NCBI chr 9:74,174,484...74,210,407
Ensembl chr 9:74,173,931...74,210,397
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COL3A1
collagen type III alpha 1 chain
acts_upstream_of_or_within
ISO
(PMID:20548288)
MGI
PMID:20548288
NCBI chr15:93,556,914...93,595,678
Ensembl chr15:93,526,603...93,596,363
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COL4A1
collagen type IV alpha 1 chain
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:20548288)
Ensembl MGI
PMID:20548288
GO_REF:0000107
NCBI chr11:76,858,332...76,997,409
Ensembl chr11:76,858,356...76,997,322
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COL4A6
collagen type IV alpha 6 chain
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:20548288)
Ensembl MGI
PMID:20548288
GO_REF:0000107
NCBI chr X:88,634,925...88,750,938
Ensembl chr X:88,634,930...88,957,416
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COL5A2
collagen type V alpha 2 chain
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:20548288)
Ensembl MGI
PMID:20548288
GO_REF:0000107
NCBI chr15:93,611,856...93,981,131
Ensembl chr15:93,611,856...93,800,191
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CPEB1
cytoplasmic polyadenylation element binding protein 1
involved_in
ISO
(PMID:20937770)
UniProt
PMID:20937770
NCBI chr 7:52,329,054...52,382,408
Ensembl chr 7:52,304,472...52,383,732
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CPEB3
cytoplasmic polyadenylation element binding protein 3
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr14:103,675,164...103,871,245
Ensembl chr14:103,675,175...103,871,227
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CPEB4
cytoplasmic polyadenylation element binding protein 4
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr16:50,430,345...50,499,086
Ensembl chr16:50,430,348...50,498,938
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CUL3
cullin 3
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr15:126,191,605...126,287,148
Ensembl chr15:126,189,851...126,287,005
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CYBA
cytochrome b-245 alpha chain
ISO
RGD
PMID:12241540
RGD:2291907
NCBI chr 6:1,015,212...1,021,422
Ensembl chr 6:1,015,162...1,021,420
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DNMT1
DNA methyltransferase 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:20548288)
Ensembl MGI
PMID:20548288
GO_REF:0000107
NCBI chr 2:68,981,564...69,040,364
Ensembl chr 2:68,981,566...69,029,844
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DNMT3A
DNA methyltransferase 3 alpha
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:20548288)
Ensembl MGI
PMID:20548288
GO_REF:0000107
NCBI chr 3:113,501,972...113,609,148
Ensembl chr 3:113,528,926...113,603,087
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DNMT3B
DNA methyltransferase 3 beta
acts_upstream_of_or_within
ISO
(PMID:20548288)
MGI
PMID:20548288
NCBI chr17:36,345,715...36,386,076
Ensembl chr17:36,345,816...36,386,072
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EGFR
epidermal growth factor receptor
involved_in
ISO
(PMID:22711986)
UniProt
PMID:22711986
NCBI chr 9:139,302,410...139,474,632
Ensembl chr 9:139,300,022...139,475,589
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GLRA1
glycine receptor alpha 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr16:71,140,751...71,236,867
Ensembl chr16:71,142,198...71,230,344
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GLRA2
glycine receptor alpha 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr X:11,111,655...11,288,496
Ensembl chr X:11,111,822...11,288,587
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GLRA3
glycine receptor alpha 3
involved_in
ISO
PMID:23895467
UniProt
PMID:23895467
RGD:11035333
NCBI chr14:15,120,091...15,603,509
Ensembl chr14:15,423,767...15,595,422
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GRIA1
glutamate ionotropic receptor AMPA type subunit 1
ISO
glutamate
RGD
PMID:19913087
RGD:4107720
NCBI chr16:69,332,786...69,654,366
Ensembl chr16:69,332,587...69,655,380
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GRIN2A
glutamate ionotropic receptor NMDA type subunit 2A
ISO
glycine
RGD
PMID:19154422
RGD:2326036
NCBI chr 3:32,749,329...33,149,350
Ensembl chr 3:32,750,700...33,143,499
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GRIN2B
glutamate ionotropic receptor NMDA type subunit 2B
ISO
N-methyl-d-aspartate glutamate, N-methyl-D-aspartate
RGD
PMID:20336776 PMID:20526740
RGD:2325861 RGD:4107019
NCBI chr 5:58,477,862...58,948,735
Ensembl chr 5:58,480,528...58,927,558
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HNRNPAB
heterogeneous nuclear ribonucleoprotein A/B
ISO
NMDA, AMPA
RGD
PMID:21471000
RGD:9999187
NCBI chr 2:80,186,998...80,194,155
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HNRNPD
heterogeneous nuclear ribonucleoprotein D
ISO
N-methyl-D-aspartate
RGD
PMID:16569663
RGD:10042967
NCBI chr 8:135,844,492...135,862,633
Ensembl chr 8:135,844,487...135,862,626
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HNRNPK
heterogeneous nuclear ribonucleoprotein K
ISO
glycine
RGD
PMID:24990929
RGD:10002784
NCBI chr10:30,975,639...30,987,955
Ensembl chr10:30,975,702...30,987,956
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HSF1
heat shock transcription factor 1
ISO
homocysteic acid glutamine, ornithine
RGD
PMID:21512157 PMID:24478344
RGD:10402566 RGD:10402944
NCBI chr 4:463,531...486,483
Ensembl chr 4:463,393...486,473
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IPO5
importin 5
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr11:67,019,299...67,059,375
Ensembl chr11:67,004,109...67,060,551
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KLHL22
kelch like family member 22
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr14:50,773,917...50,809,991
Ensembl chr14:50,773,964...50,809,986
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LAMTOR1
late endosomal/lysosomal adaptor, MAPK and MTOR activator 1
involved_in
IEA IBA
InterPro GO_Central Ensembl
GO_REF:0000002 GO_REF:0000033 GO_REF:0000107
NCBI chr 9:6,674,045...6,680,067
Ensembl chr 9:6,672,475...6,680,053
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LAMTOR2
late endosomal/lysosomal adaptor, MAPK and MTOR activator 2
involved_in
IEA IBA
Ensembl GO_Central
GO_REF:0000033 GO_REF:0000107
NCBI chr 4:93,972,112...93,975,561
Ensembl chr 4:93,971,871...93,976,304
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LAMTOR3
late endosomal/lysosomal adaptor, MAPK and MTOR activator 3
involved_in
IEA IBA
Ensembl GO_Central
GO_REF:0000033 GO_REF:0000107
NCBI chr 8:120,625,897...120,642,630
Ensembl chr 8:120,623,550...120,643,072
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LAMTOR4
late endosomal/lysosomal adaptor, MAPK and MTOR activator 4
involved_in
IEA
InterPro
GO_REF:0000002
NCBI chr 3:8,119,338...8,171,790
Ensembl chr 3:8,155,188...8,164,721
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LAMTOR5
late endosomal/lysosomal adaptor, MAPK and MTOR activator 5
involved_in
ISS IBA IEA
UniProt GO_Central Ensembl
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107
NCBI chr 4:109,722,664...109,728,278
Ensembl chr 4:109,722,913...109,728,257
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LARS1
leucyl-tRNA synthetase 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 2:147,480,132...147,554,197
Ensembl chr 2:147,477,370...147,554,047
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LOC100623720
collagen alpha-1(VI) chain
acts_upstream_of_or_within
ISO
(PMID:20548288)
MGI
PMID:20548288
NCBI chr13:208,295,245...208,321,789
Ensembl chr13:208,295,451...208,313,127
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LOC110260333
hydroxymethylglutaryl-CoA synthase, mitochondrial-like
ISO
carnitine
RGD
PMID:20508999
RGD:2326106
NCBI chr 4:101,385,486...101,404,273
Ensembl chr 4:101,385,512...101,443,405
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MIR101-1
microRNA mir-101-1
acts_upstream_of_or_within
ISO
(PMID:20548288)
MGI
PMID:20548288
NCBI chr 1:217,152,783...217,152,873
Ensembl chr 1:217,152,783...217,152,873
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MIR101-2
microRNA mir-101-2
acts_upstream_of_or_within
ISO
(PMID:20548288)
MGI
PMID:20548288
NCBI chr 6:147,330,891...147,330,971
Ensembl chr 6:147,330,890...147,330,972
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MIR103-1
microRNA mir-103-1
acts_upstream_of_or_within
ISO
(PMID:20548288)
MGI
PMID:20548288
NCBI chr16:55,329,442...55,329,523
Ensembl chr16:55,329,442...55,329,523
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MIR103-2
microRNA mir-103-2
acts_upstream_of_or_within
ISO
(PMID:20548288)
MGI
PMID:20548288
NCBI chr17:31,808,837...31,808,916
Ensembl chr17:31,808,836...31,808,920
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MIR107
microRNA mir-107
acts_upstream_of_or_within
ISO
(PMID:20548288)
MGI
PMID:20548288
NCBI chr14:101,420,743...101,420,829
Ensembl chr14:101,420,743...101,420,829
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MIR122
microRNA mir-122
acts_upstream_of_or_within
ISO
(PMID:20548288)
MGI
PMID:20548288
NCBI chr 1:162,329,776...162,329,860
Ensembl chr 1:162,329,767...162,329,860
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MIR1224
microRNA mir-1224
acts_upstream_of_or_within
ISO
(PMID:20548288)
MGI
PMID:20548288
NCBI chr13:122,141,042...122,141,149
Ensembl chr13:122,141,042...122,141,149
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MIR130A
microRNA mir-130a
acts_upstream_of_or_within
ISO
(PMID:20548288)
MGI
PMID:20548288
NCBI chr 2:13,296,695...13,296,773
Ensembl chr 2:13,296,695...13,296,773
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MIR137
microRNA mir-137
acts_upstream_of_or_within
ISO
(PMID:20548288)
MGI
PMID:20548288
NCBI chr 4:119,793,993...119,794,074
Ensembl chr 4:119,793,984...119,794,088
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MIR145
microRNA mir-145
acts_upstream_of_or_within
ISO
(PMID:20548288)
MGI
PMID:20548288
NCBI chr 2:150,580,126...150,580,211
Ensembl chr 2:150,580,126...150,580,211
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MIR151
microRNA mir-151
acts_upstream_of_or_within
ISO
(PMID:20548288)
MGI
PMID:20548288
NCBI chr 4:2,849,041...2,849,120
Ensembl chr 4:2,849,038...2,849,130
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MIR155
microRNA mir-155
acts_upstream_of_or_within
ISO
(PMID:20548288)
MGI
PMID:20548288
NCBI chr13:189,138,822...189,138,902
Ensembl chr13:189,138,822...189,138,902
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MIR15A
microRNA mir-15a
acts_upstream_of_or_within
ISO
(PMID:20548288)
MGI
PMID:20548288
NCBI chr11:17,757,463...17,757,541
Ensembl chr11:17,757,460...17,757,554
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MIR15B
microRNA mir-15b
acts_upstream_of_or_within
ISO
(PMID:20548288)
MGI
PMID:20548288
NCBI chr13:100,083,172...100,083,269
Ensembl chr13:100,083,172...100,083,269
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MIR183
microRNA mir-183
acts_upstream_of_or_within
ISO
(PMID:20548288)
MGI
PMID:20548288
NCBI chr18:18,982,269...18,982,338
Ensembl chr18:18,982,269...18,982,338
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MIR191
microRNA mir-191
acts_upstream_of_or_within
ISO
(PMID:20548288)
MGI
PMID:20548288
NCBI chr13:31,655,484...31,655,563
Ensembl chr13:31,655,484...31,655,563
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MIR192
microRNA mir-192
acts_upstream_of_or_within
ISO
(PMID:20548288)
MGI
PMID:20548288
NCBI chr 2:7,285,667...7,285,746
Ensembl chr 2:7,285,667...7,285,746
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MIR193A
microRNA mir-193a
acts_upstream_of_or_within
ISO
(PMID:20548288)
MGI
PMID:20548288
NCBI chr12:43,336,969...43,337,048
Ensembl chr12:43,336,969...43,337,048
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MIR194B
microRNA mir-194b
acts_upstream_of_or_within
ISO
(PMID:20548288)
MGI
PMID:20548288
NCBI chr10:9,704,910...9,704,987
Ensembl chr10:9,704,910...9,704,987
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MIR199A-1
microRNA mir-199a-1
acts_upstream_of_or_within
ISO
(PMID:20548288)
MGI
PMID:20548288
NCBI chr 9:114,533,783...114,533,858
Ensembl chr 9:114,533,777...114,533,880
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MIR199A-2
microRNA mir-199a-2
acts_upstream_of_or_within
ISO
(PMID:20548288)
MGI
PMID:20548288
NCBI chr 2:69,558,051...69,558,130
Ensembl chr 2:69,558,050...69,558,131
G
MIR214
microRNA mir-214
acts_upstream_of_or_within
ISO
(PMID:20548288)
MGI
PMID:20548288
NCBI chr 9:114,527,992...114,528,101
Ensembl chr 9:114,527,990...114,528,101
G
MIR217-1
microRNA mir-217-1
acts_upstream_of_or_within
ISO
(PMID:20548288)
MGI
PMID:20548288
NCBI chr 3:85,341,255...85,341,361
Ensembl chr 3:85,341,255...85,341,361
G
MIR221
microRNA mir-221
acts_upstream_of_or_within
ISO
(PMID:20548288)
MGI
PMID:20548288
NCBI chr X:40,571,068...40,571,137
Ensembl chr X:40,571,068...40,571,137
G
MIR222
microRNA mir-222
acts_upstream_of_or_within
ISO
(PMID:20548288)
MGI
PMID:20548288
NCBI chr X:40,571,808...40,571,887
Ensembl chr X:40,571,808...40,571,887
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MIR224
microRNA mir-224
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:20548288)
RNAcentral MGI
PMID:20548288
GO_REF:0000115
NCBI chr X:123,283,427...123,283,507
Ensembl chr X:123,283,427...123,283,507
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MIR29C
microRNA mir-29c
acts_upstream_of_or_within
ISO
(PMID:20548288)
MGI
PMID:20548288
NCBI chr 9:135,019,638...135,019,725
Ensembl chr 9:135,019,638...135,019,725
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MIR30A
microRNA mir-30a
acts_upstream_of_or_within
ISO
(PMID:20548288)
MGI
PMID:20548288
NCBI chr 1:51,412,827...51,412,933
Ensembl chr 1:51,412,827...51,412,933
G
MIR30D
microRNA mir-30d
acts_upstream_of_or_within
ISO
(PMID:20548288)
MGI
PMID:20548288
NCBI chr 4:6,948,669...6,948,747
Ensembl chr 4:6,948,669...6,948,747
G
MIR30E
microRNA mir-30e
acts_upstream_of_or_within
ISO
(PMID:20548288)
MGI
PMID:20548288
NCBI chr 6:170,429,841...170,429,920
Ensembl chr 6:170,429,841...170,429,920
G
MIR31
microRNA mir-31
acts_upstream_of_or_within
ISO
(PMID:20548288)
MGI
PMID:20548288
NCBI chr 1:201,198,732...201,198,809
Ensembl chr 1:201,198,732...201,198,809
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MIR342
microRNA mir-342
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:20548288)
RNAcentral MGI
PMID:20548288
GO_REF:0000115
NCBI chr 7:121,021,761...121,021,840
Ensembl chr 7:121,021,761...121,021,840
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MIR365-1
microRNA mir-365-1
acts_upstream_of_or_within
ISO
(PMID:20548288)
MGI
PMID:20548288
NCBI chr 3:28,908,137...28,908,216
Ensembl chr 3:28,908,129...28,908,219
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MIR365-2
microRNA mir-365-2
acts_upstream_of_or_within
ISO
(PMID:20548288)
MGI
PMID:20548288
NCBI chr12:43,324,725...43,324,804
Ensembl chr12:43,324,728...43,324,809
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MIR378-1
microRNA mir-378-1
acts_upstream_of_or_within
ISO
(PMID:20548288)
MGI
PMID:20548288
NCBI chr 2:150,825,865...150,825,944
Ensembl chr 2:150,825,865...150,825,944
G
MIR421
microRNA mir-421
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:20548288)
RNAcentral MGI
PMID:20548288
GO_REF:0000115
NCBI chr X:59,550,992...59,551,069
Ensembl chr X:59,550,987...59,551,071
G
MIR425
microRNA mir-425
acts_upstream_of_or_within
ISO
(PMID:20548288)
MGI
PMID:20548288
NCBI chr13:31,654,994...31,655,073
Ensembl chr13:31,654,994...31,655,073
G
MIR451
microRNA mir-451
acts_upstream_of_or_within
ISO
(PMID:20548288)
MGI
PMID:20548288
NCBI chr12:45,088,808...45,088,872
Ensembl chr12:45,088,808...45,088,872
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MIR455
microRNA mir-455
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:20548288)
RNAcentral MGI
PMID:20548288
GO_REF:0000115
NCBI chr 1:254,824,200...254,824,279
Ensembl chr 1:254,824,196...254,824,291
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MIR545
microRNA mir-545
involved_in
IEA
RNAcentral
GO_REF:0000115
NCBI chr X:59,602,710...59,602,788
Ensembl chr X:59,602,697...59,602,802
G
MIR676-1
microRNA mir-676-1
acts_upstream_of_or_within
ISO
(PMID:20548288)
MGI
PMID:20548288
NCBI chr X:56,083,372...56,083,451
Ensembl chr X:56,083,372...56,083,451
G
MIR708
microRNA mir-708
acts_upstream_of_or_within
ISO
(PMID:20548288)
MGI
PMID:20548288
NCBI chr 9:13,780,171...13,780,250
Ensembl chr 9:13,780,171...13,780,250
G
MIR92A-1
microRNA mir-92a-1
acts_upstream_of_or_within
ISO
(PMID:20548288)
MGI
PMID:20548288
NCBI chr11:60,735,358...60,735,437
Ensembl chr11:60,735,343...60,735,449
G
MIR92A-2
microRNA mir-92a-2
acts_upstream_of_or_within
ISO
(PMID:20548288)
MGI
PMID:20548288
NCBI chr X:110,113,717...110,113,796
Ensembl chr X:110,113,717...110,113,796
G
MIR95
microRNA mir-95
involved_in
IEA
RNAcentral
GO_REF:0000115
NCBI chr 8:3,030,934...3,031,014
Ensembl chr 8:3,030,934...3,031,014
G
MIR99A
microRNA mir-99a
acts_upstream_of_or_within
ISO
(PMID:20548288)
MGI
PMID:20548288
NCBI chr13:181,302,483...181,302,562
Ensembl chr13:181,302,478...181,302,567
G
MIRLET7A-1
microRNA let-7a-1
acts_upstream_of_or_within
ISO
(PMID:20548288)
MGI
PMID:20548288
NCBI chr 9:49,152,586...49,152,665
Ensembl chr 9:49,152,586...49,152,665
G
MIRLET7A-2
microRNA let-7a-2
acts_upstream_of_or_within
ISO
(PMID:20548288)
MGI
PMID:20548288
NCBI chr 3:43,465,667...43,465,758
Ensembl chr 3:43,465,667...43,465,758
G
MIRLET7D
microRNA let-7d
acts_upstream_of_or_within
ISO
(PMID:20548288)
MGI
PMID:20548288
NCBI chr 3:43,468,501...43,468,596
Ensembl chr 3:43,468,501...43,468,596
G
MIRLET7F-1
microRNA let-7f-1
acts_upstream_of_or_within
ISO
(PMID:20548288)
MGI
PMID:20548288
NCBI chr X:46,303,245...46,303,327
Ensembl chr X:46,303,245...46,303,327
G
MIRLET7F-2
microRNA let-7f-2
acts_upstream_of_or_within
ISO
(PMID:20548288)
MGI
PMID:20548288
NCBI chr 3:43,466,034...43,466,130
Ensembl chr 3:43,466,027...43,466,133
G
MIRLET7I
microRNA let-7i
acts_upstream_of_or_within
ISO
(PMID:20548288)
MGI
PMID:20548288
NCBI chr 5:27,252,802...27,252,886
Ensembl chr 5:27,252,787...27,252,894
G
MMP2
matrix metallopeptidase 2
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:20548288)
Ensembl MGI
PMID:20548288
GO_REF:0000107
NCBI chr 6:30,059,247...30,087,031
Ensembl chr 6:30,058,595...30,086,982
G
MMP3
matrix metallopeptidase 3
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 9:33,446,969...33,453,995
Ensembl chr 9:33,446,836...33,454,000
G
MTOR
mechanistic target of rapamycin kinase
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 6:71,286,989...71,412,913
Ensembl chr 6:71,286,989...71,412,888
G
MYCBP
MYC binding protein
involved_in
IEA
UniProt
GO_REF:0000104
NCBI chr 6:94,805,649...94,814,443
Ensembl chr 6:94,805,640...94,814,337
G
NEURL1
neuralized E3 ubiquitin protein ligase 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr14:114,436,887...114,515,713
Ensembl chr14:114,437,045...114,516,721
G
NSMF
NMDA receptor synaptonuclear signaling and neuronal migration factor
involved_in
ISO
PMID:18303947
UniProt
PMID:18303947
RGD:8553324
G
NTRK2
neurotrophic receptor tyrosine kinase 2
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:25542970)
Ensembl MGI
PMID:25542970
GO_REF:0000107
NCBI chr10:30,030,050...30,429,938
Ensembl chr10:30,033,405...30,429,882
G
PDGFC
platelet derived growth factor C
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:20548288)
Ensembl MGI
PMID:20548288
GO_REF:0000107
NCBI chr 8:45,579,065...45,808,789
Ensembl chr 8:45,578,002...45,808,748
G
PDGFD
platelet derived growth factor D
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:20548288)
Ensembl MGI
PMID:20548288
GO_REF:0000107
NCBI chr 9:34,388,636...34,621,227
Ensembl chr 9:34,388,643...34,621,244
G
PDGFRA
platelet derived growth factor receptor alpha
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:20548288)
Ensembl MGI
PMID:20548288
GO_REF:0000107
NCBI chr 8:40,966,568...41,021,440
Ensembl chr 8:40,967,493...41,021,441
G
RBX1
ring-box 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 5:7,500,492...7,515,388
Ensembl chr 5:7,500,490...7,515,370
G
RPTOR
regulatory associated protein of MTOR complex 1
involved_in
IEA IBA
Ensembl GO_Central
GO_REF:0000033 GO_REF:0000107
NCBI chr12:1,709,121...1,991,844
Ensembl chr12:1,709,128...1,991,574
G
RRAGA
Ras related GTP binding A
involved_in
IEA
UniProt
GO_REF:0000104
NCBI chr 1:203,772,063...203,774,580
Ensembl chr 1:203,772,759...203,774,577
G
RRAGB
Ras related GTP binding B
involved_in
IEA
UniProt Ensembl
GO_REF:0000104 GO_REF:0000107
NCBI chr X:48,286,584...48,330,196
Ensembl chr X:48,286,592...48,330,195
G
RRAGC
Ras related GTP binding C
involved_in
IEA
UniProt
GO_REF:0000104
NCBI chr 6:94,785,906...94,803,017
Ensembl chr 6:94,785,910...94,802,988
G
RRAGD
Ras related GTP binding D
involved_in
IEA
UniProt
GO_REF:0000104
NCBI chr 1:57,374,047...57,424,058
Ensembl chr 1:57,374,055...57,424,061
G
SESN1
sestrin 1
involved_in
ISO
(PMID:25259925)
UniProt
PMID:25259925
NCBI chr 1:75,056,731...75,170,374
Ensembl chr 1:75,056,734...75,088,954
G
SESN2
sestrin 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 6:85,321,982...85,348,044
Ensembl chr 6:85,324,228...85,348,032
G
SESN3
sestrin 3
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 9:27,207,239...27,279,205
Ensembl chr 9:27,207,236...27,298,628
G
SH3BP4
SH3 domain binding protein 4
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr15:135,003,501...135,094,801
Ensembl chr15:135,003,511...135,094,797
G
SLC38A9
solute carrier family 38 member 9
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr16:34,639,575...34,858,827
Ensembl chr16:34,768,987...34,858,747
G
SLC7A5
solute carrier family 7 member 5
ISO
RGD
PMID:9882595
RGD:151357002
NCBI chr 6:1,545,940...1,574,298
Ensembl chr 6:1,545,944...1,574,285
G
SOCS1
suppressor of cytokine signaling 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:20548288)
Ensembl MGI
PMID:20548288
GO_REF:0000107
NCBI chr 3:31,879,143...31,883,041
Ensembl chr 3:31,881,225...31,884,967
G
SPAAR
small regulatory polypeptide of amino acid response
involved_in
IEA
Ensembl
GO_REF:0000107
Ensembl chr 1:236,676,050...236,676,277
G
TNF
tumor necrosis factor
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:20548288)
Ensembl MGI
PMID:20548288
GO_REF:0000107
NCBI chr 7:23,699,635...23,702,393
Ensembl chr 7:23,699,628...23,702,415
G
XBP1
X-box binding protein 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr14:46,011,239...46,016,526
Ensembl chr14:46,008,377...46,016,526
G
ZEB1
zinc finger E-box binding homeobox 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:20548288)
Ensembl MGI
PMID:20548288
GO_REF:0000107
NCBI chr10:42,013,114...42,216,139
Ensembl chr10:42,013,084...42,214,205
G
AGAP2
ArfGAP with GTPase domain, ankyrin repeat and PH domain 2
ISO
RGD
PMID:21847098
RGD:8553599
NCBI chr 5:23,015,777...23,035,943
Ensembl chr 5:23,017,176...23,033,517
G
BCL2L2
BCL2 like 2
ISO
RGD
PMID:11090983
RGD:14394513
NCBI chr 7:75,765,603...75,770,743
Ensembl chr 7:75,763,078...75,769,763
G
FYN
FYN proto-oncogene, Src family tyrosine kinase
involved_in
ISO
PMID:17526495
ARUK-UCL
PMID:17526495
RGD:13506268
NCBI chr 1:77,584,675...77,810,605
Ensembl chr 1:77,585,439...77,810,581
G
GRIA2
glutamate ionotropic receptor AMPA type subunit 2
ISO
RGD
PMID:21847098
RGD:8553599
NCBI chr 8:46,078,122...46,247,144
Ensembl chr 8:46,078,276...46,241,914
G
GRIN1
glutamate ionotropic receptor NMDA type subunit 1
ISO
RGD
PMID:23678131
RGD:401940177
G
GRIN2A
glutamate ionotropic receptor NMDA type subunit 2A
ISO
RGD
PMID:23678131
RGD:401940177
NCBI chr 3:32,749,329...33,149,350
Ensembl chr 3:32,750,700...33,143,499
G
GRIN3B
glutamate ionotropic receptor NMDA type subunit 3B
ISO
RGD
PMID:11823786
RGD:632842
NCBI chr 2:77,402,191...77,411,878
Ensembl chr 2:77,401,368...77,412,136
G
MYO5B
myosin VB
ISO
RGD
PMID:18984164
RGD:11533643
NCBI chr 1:99,418,242...99,810,934
Ensembl chr 1:99,418,449...99,810,139
G
CAMK2B
calcium/calmodulin dependent protein kinase II beta
ISO
RGD
PMID:25126162
RGD:13681928
NCBI chr18:50,862,225...50,956,263
Ensembl chr18:50,861,466...50,956,225
G
PLA2G4A
phospholipase A2 group IVA
ISO
RGD
PMID:31125437
RGD:401940166
NCBI chr 9:127,853,581...128,164,825
Ensembl chr 9:127,859,051...128,162,638
G
PTGS2
prostaglandin-endoperoxide synthase 2
ISO
RGD
PMID:31125437
RGD:401940166
NCBI chr 9:127,850,164...127,858,866
Ensembl chr 9:127,850,015...127,858,884
G
CYP19A2
cytochrome P450 19A2
ISO
RGD
PMID:21047944
RGD:4890042
NCBI chr 1:120,652,172...120,695,899
Ensembl chr 1:120,367,667...120,695,899
G
FAS
Fas cell surface death receptor
ISO
RGD
PMID:16226958
RGD:8686427
NCBI chr14:100,927,305...100,954,781
Ensembl chr14:100,927,089...100,956,716
G
MYC
MYC proto-oncogene, bHLH transcription factor
ISO
RGD
PMID:22644739
RGD:7240524
NCBI chr 4:12,455,141...12,460,360
Ensembl chr 4:12,455,122...12,461,078
G
PIK3CA
phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr13:117,193,935...117,282,151
Ensembl chr13:117,180,544...117,274,587
G
PKD2
polycystin 2, transient receptor potential cation channel
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 8:131,002,973...131,058,932
Ensembl chr 8:131,005,407...131,058,932
G
PLEC
plectin
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 4:696,355...753,859
Ensembl chr 4:689,034...753,696
G
SNCG
synuclein gamma
ISO
RGD
PMID:11933054
RGD:6480100
NCBI chr14:87,916,353...87,922,111
Ensembl chr14:87,904,659...87,922,095
G
WNT10B
Wnt family member 10B
ISO
RGD
PMID:19118527
RGD:2326236
NCBI chr 5:14,997,377...15,013,928
Ensembl chr 5:14,997,381...15,003,567
G
WNT4
Wnt family member 4
ISO
RGD
PMID:19118527
RGD:2326236
NCBI chr 6:80,110,238...80,138,165
G
EPOR
erythropoietin receptor
ISO
RGD
PMID:18711747
RGD:11041671
NCBI chr 2:70,063,601...70,068,821
Ensembl chr 2:70,063,519...70,068,821
G
CASTOR1
cytosolic arginine sensor for mTORC1 subunit 1
involved_in
IEA IBA
Ensembl GO_Central
GO_REF:0000033 GO_REF:0000107
NCBI chr14:47,261,905...47,266,729
Ensembl chr14:47,261,911...47,266,996
G
SLC7A5
solute carrier family 7 member 5
ISO
RGD
PMID:10681508
RGD:151361135
NCBI chr 6:1,545,940...1,574,298
Ensembl chr 6:1,545,944...1,574,285
G
RAPGEF3
Rap guanine nucleotide exchange factor 3
ISO
RGD
PMID:25044243
RGD:10041045
NCBI chr 5:78,101,286...78,134,150
Ensembl chr 5:78,101,299...78,134,105
G
ABCB1
ATP-binding cassette, sub-family B (MDR/TAP), member 1
ISO
RGD
PMID:25962137
RGD:11041133
NCBI chr 9:93,049,955...93,146,469
G
AMIGO1
adhesion molecule with Ig like domain 1
ISO
RGD
PMID:22056818
RGD:14390155
NCBI chr 4:110,620,429...110,631,549
Ensembl chr 4:110,620,444...110,628,833
G
ATP5MC1
ATP synthase membrane subunit c locus 1
ISO
RGD
PMID:28777375
RGD:13800748
NCBI chr12:25,110,540...25,113,481
Ensembl chr12:25,110,528...25,113,478
G
BAIAP2
BAR/IMD domain containing adaptor protein 2
ISO
RGD
PMID:15758177
RGD:9684984
NCBI chr12:1,609,420...1,666,965
Ensembl chr12:1,603,540...1,670,075
G
BCL11A
BCL11 transcription factor A
ISO
RGD
PMID:20534004
RGD:11100020
NCBI chr 3:81,195,217...81,296,165
Ensembl chr 3:81,196,294...81,296,382
G
ERBB4
erb-b2 receptor tyrosine kinase 4
ISO
RGD
PMID:28350885
RGD:405649727
NCBI chr15:113,966,573...115,096,984
Ensembl chr15:113,974,437...115,096,565
G
FMR1
Fragile X messenger ribonucleoprotein 1
ISO
RGD
PMID:22817682
RGD:11566024
NCBI chr X:120,361,232...120,400,282
Ensembl chr X:120,361,367...120,399,831
G
FYN
FYN proto-oncogene, Src family tyrosine kinase
involved_in
ISO
PMID:17526495
ARUK-UCL
PMID:17526495
RGD:13506268
NCBI chr 1:77,584,675...77,810,605
Ensembl chr 1:77,585,439...77,810,581
G
GRIA1
glutamate ionotropic receptor AMPA type subunit 1
ISO
RGD
PMID:12390532
RGD:405649864
NCBI chr16:69,332,786...69,654,366
Ensembl chr16:69,332,587...69,655,380
G
GRIN2D
glutamate ionotropic receptor NMDA type subunit 2D
ISO
RGD
PMID:15107472
RGD:1642397
NCBI chr 6:53,809,590...53,849,535
Ensembl chr 6:53,806,174...53,848,789
G
HPCA
hippocalcin
ISO
RGD
PMID:20704590
RGD:9686447
NCBI chr 6:89,187,544...89,197,049
Ensembl chr 6:89,188,133...89,197,045
G
LMNB1
lamin B1
ISO
RGD
PMID:21389115
RGD:10044247
NCBI chr 2:129,807,228...129,862,211
Ensembl chr 2:129,807,318...129,872,270
G
MFN2
mitofusin 2
ISO
RGD
PMID:25416777
RGD:13204765
NCBI chr 6:72,026,512...72,056,439
Ensembl chr 6:72,028,499...72,056,438
G
NRG1
neuregulin 1
ISO
RGD
PMID:28350885
RGD:405649727
NCBI chr15:52,625,550...53,688,003
Ensembl chr15:52,630,679...52,839,505
G
OPA1
OPA1 mitochondrial dynamin like GTPase
ISO
RGD
PMID:28761318
RGD:13432138
NCBI chr13:130,624,771...130,718,345
Ensembl chr13:130,624,796...130,719,083
G
OPTN
optineurin
ISO
RGD
PMID:28761318
RGD:13432138
NCBI chr10:48,532,029...48,582,952
Ensembl chr10:48,530,843...48,582,860
G
PCP4
Purkinje cell protein 4
ISO
RGD
PMID:18502590
RGD:9850275
NCBI chr13:203,412,479...203,479,216
Ensembl chr13:203,412,479...203,479,209
G
PRKN
parkin RBR E3 ubiquitin protein ligase
ISO
RGD
PMID:25478815
RGD:13204761
NCBI chr 1:5,698,508...6,731,132
Ensembl chr 1:5,465,312...6,730,872
G
CYBA
cytochrome b-245 alpha chain
ISO
RGD
PMID:12241540
RGD:2291907
NCBI chr 6:1,015,212...1,021,422
Ensembl chr 6:1,015,162...1,021,420
G
GP91-PHOX
NADPH oxidase heavy chain subunit
ISO
RGD
PMID:12241540
RGD:2291907
NCBI chr X:33,654,656...33,678,346
Ensembl chr X:33,643,648...33,680,580
G
HSF1
heat shock transcription factor 1
ISO
RGD
PMID:23055521 PMID:23185570
RGD:10450472 RGD:10450473
NCBI chr 4:463,531...486,483
Ensembl chr 4:463,393...486,473
G
PRKN
parkin RBR E3 ubiquitin protein ligase
ISO
RGD
PMID:28761318
RGD:13432138
NCBI chr 1:5,698,508...6,731,132
Ensembl chr 1:5,465,312...6,730,872
G
EP300
E1A binding protein p300
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 5:7,311,165...7,394,515
Ensembl chr 5:7,311,171...7,393,760
G
HNF1A
HNF1 homeobox A
ISO
RGD
PMID:21874357
RGD:150540304
NCBI chr14:40,868,819...40,888,322
Ensembl chr14:40,868,676...40,888,328
G
KLHL22
kelch like family member 22
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr14:50,773,917...50,809,991
Ensembl chr14:50,773,964...50,809,986
G
LARS1
leucyl-tRNA synthetase 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 2:147,480,132...147,554,197
Ensembl chr 2:147,477,370...147,554,047
G
MTOR
mechanistic target of rapamycin kinase
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 6:71,286,989...71,412,913
Ensembl chr 6:71,286,989...71,412,888
G
RPTOR
regulatory associated protein of MTOR complex 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr12:1,709,121...1,991,844
Ensembl chr12:1,709,128...1,991,574
G
RRAGD
Ras related GTP binding D
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 1:57,374,047...57,424,058
Ensembl chr 1:57,374,055...57,424,061
G
SESN2
sestrin 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 6:85,321,982...85,348,044
Ensembl chr 6:85,324,228...85,348,032
G
SESN3
sestrin 3
involved_in
IBA
GO_Central
GO_REF:0000033
NCBI chr 9:27,207,239...27,279,205
Ensembl chr 9:27,207,236...27,298,628
G
STAMBPL1
STAM binding protein like 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr14:100,798,096...100,859,576
Ensembl chr14:100,798,088...100,859,567
G
UBR1
ubiquitin protein ligase E3 component n-recognin 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 1:128,319,311...128,474,330
Ensembl chr 1:128,319,311...128,474,302
G
UBR2
ubiquitin protein ligase E3 component n-recognin 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 7:37,655,808...37,785,301
Ensembl chr 7:37,655,926...37,784,359
G
BMT2
base methyltransferase of 25S rRNA 2 homolog
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr18:32,798,278...32,900,769
Ensembl chr18:32,798,290...32,900,764
G
MAPK1
mitogen-activated protein kinase 1
ISO
RGD
PMID:22676582
RGD:405100711
NCBI chr14:50,083,079...50,165,528
Ensembl chr14:50,082,896...50,165,513
G
MAT2A
methionine adenosyltransferase 2A
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 3:59,220,203...59,225,097
Ensembl chr 3:59,218,688...59,225,249
G
MTOR
mechanistic target of rapamycin kinase
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 6:71,286,989...71,412,913
Ensembl chr 6:71,286,989...71,412,888
G
MTR
5-methyltetrahydrofolate-homocysteine methyltransferase
ISO
RGD
PMID:1201245
RGD:6893692
NCBI chr14:54,546,978...54,652,780
Ensembl chr14:54,546,978...54,652,763
G
NFE2L2
NFE2 like bZIP transcription factor 2
ISO
RGD
PMID:22676582
RGD:405100711
NCBI chr15:82,967,485...83,146,185
Ensembl chr15:82,973,656...83,146,183
G
PRMT1
protein arginine methyltransferase 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 6:54,718,845...54,730,411
Ensembl chr 6:54,714,157...54,732,574
G
FAS
Fas cell surface death receptor
ISO
RGD
PMID:23940767
RGD:8663468
NCBI chr14:100,927,305...100,954,781
Ensembl chr14:100,927,089...100,956,716
G
MIR150-1
microRNA mir-150-1
acts_upstream_of_or_within
ISO
(PMID:26822703)
MGI
PMID:26822703
NCBI chr 6:54,580,912...54,580,988
Ensembl chr 6:54,580,912...54,580,988
G
MIR23A
microRNA mir-23a
acts_upstream_of_or_within
ISO
(PMID:26822703)
MGI
PMID:26822703
NCBI chr 2:65,308,117...65,308,186
Ensembl chr 2:65,308,117...65,308,186
G
MIR27A
microRNA mir-27a
acts_upstream_of_or_within
ISO
(PMID:26822703)
MGI
PMID:26822703
NCBI chr 2:65,308,294...65,308,375
Ensembl chr 2:65,308,294...65,308,375
G
GCLC
glutamate-cysteine ligase catalytic subunit
ISO
RGD
PMID:17291985
RGD:10402376
NCBI chr 7:27,209,565...27,253,535
Ensembl chr 7:27,209,565...27,253,530
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GCLM
glutamate-cysteine ligase modifier subunit
ISO
RGD
PMID:17291985
RGD:10402376
NCBI chr 4:123,371,198...123,390,130
Ensembl chr 4:123,371,193...123,390,131
G
L1CAM
L1 cell adhesion molecule
ISO
RGD
PMID:11085884
RGD:11570514
NCBI chr X:124,595,649...124,618,292
Ensembl chr X:124,595,651...124,618,269
G
AQP2
aquaporin 2
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:10191086)
RGD MGI Ensembl
PMID:10191086 PMID:15196935
GO_REF:0000107 RGD:2313141
NCBI chr 5:15,862,739...15,868,565
Ensembl chr 5:15,863,486...15,868,565
G
AVPR1A
vasopressin receptor 1A
ISO
RGD
PMID:11796498
RGD:70387
NCBI chr 5:27,824,991...27,832,794
Ensembl chr 5:27,824,992...27,832,703
G
SIPA1
signal-induced proliferation-associated 1
ISO
RGD
PMID:15196935
RGD:2313141
NCBI chr 2:6,606,613...6,618,556
Ensembl chr 2:6,606,626...6,618,566
G
KLF2
KLF transcription factor 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 2:61,270,733...61,273,037
Ensembl chr 2:61,270,199...61,273,138
G
MIR92B
microRNA mir-92b
involved_in
ISO
(PMID:26299712)
BHF-UCL
PMID:26299712
NCBI chr 4:94,624,285...94,624,364
Ensembl chr 4:94,624,285...94,624,364
G
VEGFA
vascular endothelial growth factor A
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 7:38,746,393...38,762,282
Ensembl chr 7:38,746,052...38,761,366
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