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ONTOLOGY REPORT - ANNOTATIONS

Term:cellular response to acid chemical
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Accession:GO:0071229 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by the chemical structure of the anion portion of the dissociated acid (rather than the acid acting as a proton donor). The acid chemical may be in gaseous, liquid or solid form.
Comment:This term should be used to describe a response to a specific acid as a chemical. E.g., if a cell were responding to glutamate, then the response would be glutamate-specific; the cell is actually responding to the chemical structure of the anion portion of the dissociated acid. Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC. If annotating experiments where an acid is playing a role as a proton donor, please annotate to GO:0071468 'cellular response to acidic pH' instead.
Synonyms:broad_synonym: cellular response to acid
 related_synonym: cellular response to acid anion;   cellular response to oxoanion

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cellular response to 3,3',5-triiodo-L-thyronine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dync1h1 dynein cytoplasmic 1 heavy chain 1 ISO RGD PMID:8922673 RGD:13207348 NCBI chrNW_004624734:2,253,931...2,311,341
Ensembl chrNW_004624734:2,254,085...2,311,177 		JBrowse link
G Six1 SIX homeobox 1 ISO RGD PMID:22197309 RGD:11561984 NCBI chrNW_004624734:40,453,445...40,457,551
Ensembl chrNW_004624734:40,453,420...40,459,671 		JBrowse link
cellular response to amino acid stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ass1 argininosuccinate synthase 1 ISO glutamine RGD PMID:9893939 RGD:4142787 NCBI chrNW_004624760:5,180,095...5,221,677
Ensembl chrNW_004624760:5,180,095...5,221,732 		JBrowse link
G Atp7a ATPase copper transporting alpha ISO homocysteine RGD PMID:26722473 RGD:11341663 NCBI chrNW_004624836:2,804,349...3,058,125
Ensembl chrNW_004624836:2,808,681...2,993,452 		JBrowse link
G Bcl2l1 BCL2 like 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15231831) Ensembl
MGI		 PMID:15231831 GO_REF:0000107 NCBI chrNW_004624741:788,445...838,513
Ensembl chrNW_004624741:789,355...839,507 		JBrowse link
G Ccl5 C-C motif chemokine ligand 5 ISO RGD PMID:20560880 RGD:4889887 NCBI chrNW_004624875:3,334,136...3,342,085
Ensembl chrNW_004624875:3,334,078...3,341,614 		JBrowse link
G Cdh1 cadherin 1 acts_upstream_of_or_within ISO (PMID:20548288) MGI PMID:20548288 NCBI chrNW_004624746:17,480,472...17,557,722
Ensembl chrNW_004624746:17,483,469...17,557,581 		JBrowse link
G Cebpb CCAAT enhancer binding protein beta acts_upstream_of_or_within ISO (PMID:20548288) MGI PMID:20548288 NCBI chrNW_004624790:5,367,808...5,369,686
Ensembl chrNW_004624790:5,368,349...5,369,377 		JBrowse link
G Col16a1 collagen type XVI alpha 1 chain acts_upstream_of_or_within ISO (PMID:20548288) MGI PMID:20548288 NCBI chrNW_004624764:14,895,811...14,942,644 JBrowse link
G Col1a1 collagen type I alpha 1 chain acts_upstream_of_or_within ISO (PMID:20548288) MGI PMID:20548288 NCBI chrNW_004624795:6,167,504...6,183,208
Ensembl chrNW_004624795:6,168,797...6,183,071 		JBrowse link
G Col1a2 collagen type I alpha 2 chain acts_upstream_of_or_within ISO (PMID:20548288) MGI PMID:20548288 NCBI chrNW_004624813:1,174,071...1,209,929
Ensembl chrNW_004624813:1,174,224...1,209,616 		JBrowse link
G Col3a1 collagen type III alpha 1 chain acts_upstream_of_or_within ISO (PMID:20548288) MGI PMID:20548288 NCBI chrNW_004624899:1,192,078...1,230,528
Ensembl chrNW_004624899:1,192,360...1,230,404 		JBrowse link
G Col4a1 collagen type IV alpha 1 chain acts_upstream_of_or_within ISO (PMID:20548288) MGI PMID:20548288 NCBI chrNW_004624793:2,325,104...2,426,814
Ensembl chrNW_004624793:2,325,128...2,426,817 		JBrowse link
G Col4a6 collagen type IV alpha 6 chain acts_upstream_of_or_within ISO (PMID:20548288) MGI PMID:20548288 NCBI chrNW_004624803:7,917,668...8,335,274 JBrowse link
G Col5a2 collagen type V alpha 2 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20548288) Ensembl
MGI		 PMID:20548288 GO_REF:0000107 NCBI chrNW_004624899:1,035,797...1,175,394
Ensembl chrNW_004624899:1,035,964...1,174,844 		JBrowse link
G Col6a1 collagen type VI alpha 1 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20548288) Ensembl
MGI		 PMID:20548288 GO_REF:0000107 NCBI chrNW_004624745:31,125,136...31,140,126
Ensembl chrNW_004624745:31,125,265...31,139,318 		JBrowse link
G Cpeb1 cytoplasmic polyadenylation element binding protein 1 involved_in ISO (PMID:20937770) UniProt PMID:20937770 NCBI chrNW_004624768:18,386,415...18,468,879 JBrowse link
G Cpeb3 cytoplasmic polyadenylation element binding protein 3 involved_in ISO (PMID:20639532), (PMID:22730302)
(PMID:17024188), (PMID:20937770), (PMID:22153079), (PMID:22711986)		 UniProt PMID:17024188 PMID:20639532 PMID:20937770 PMID:22153079 PMID:22711986 More... NCBI chrNW_004624737:3,352,064...3,570,317
Ensembl chrNW_004624737:3,355,360...3,542,731 		JBrowse link
G Cpeb4 cytoplasmic polyadenylation element binding protein 4 involved_in ISO PMID:20937770
(PMID:20937770)		 UniProt PMID:20937770 RGD:8553637 NCBI chrNW_004624733:16,082,461...16,146,798
Ensembl chrNW_004624733:16,082,369...16,147,075 		JBrowse link
G Cul3 cullin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624823:767,347...854,065
Ensembl chrNW_004624823:766,780...852,727 		JBrowse link
G Dnmt1 DNA methyltransferase 1 acts_upstream_of_or_within ISO (PMID:20548288) MGI PMID:20548288 NCBI chrNW_004624828:2,316,042...2,358,866
Ensembl chrNW_004624828:2,315,251...2,358,711 		JBrowse link
G Dnmt3a DNA methyltransferase 3 alpha acts_upstream_of_or_within ISO (PMID:20548288) MGI PMID:20548288 NCBI chrNW_004624738:7,481,084...7,581,332
Ensembl chrNW_004624738:7,485,842...7,581,056 		JBrowse link
G Dnmt3b DNA methyltransferase 3 beta acts_upstream_of_or_within ISO (PMID:20548288) MGI PMID:20548288 NCBI chrNW_004624842:6,450,972...6,505,929
Ensembl chrNW_004624842:6,450,852...6,475,785 		JBrowse link
G Egfr epidermal growth factor receptor involved_in ISO (PMID:22711986) UniProt PMID:22711986 NCBI chrNW_004624740:584,133...713,205
Ensembl chrNW_004624740:589,606...713,271 		JBrowse link
G Glra1 glycine receptor alpha 1 involved_in ISO (PMID:16144831) UniProt PMID:16144831 NCBI chrNW_004624733:37,153,348...37,238,201
Ensembl chrNW_004624733:37,153,863...37,235,485 		JBrowse link
G Glra2 glycine receptor alpha 2 involved_in ISO (PMID:2155780) UniProt PMID:2155780 NCBI chrNW_004624944:512,482...704,805
Ensembl chrNW_004624944:512,441...704,786 		JBrowse link
G Glra3 glycine receptor alpha 3 involved_in ISO PMID:23895467 UniProt PMID:23895467 RGD:11035333 NCBI chrNW_004624769:6,274,213...6,444,553
Ensembl chrNW_004624769:6,291,924...6,444,131 		JBrowse link
G Gria1 glutamate ionotropic receptor AMPA type subunit 1 ISO glutamate RGD PMID:19913087 RGD:4107720 NCBI chrNW_004624733:35,337,039...35,648,184
Ensembl chrNW_004624733:35,339,683...35,647,349 		JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A ISO glycine RGD PMID:19154422 RGD:2326036 NCBI chrNW_004624824:7,128,169...7,513,360
Ensembl chrNW_004624824:7,137,909...7,507,910 		JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B ISO glutamate, N-methyl-D-aspartate
N-methyl-d-aspartate		 RGD PMID:20336776 PMID:20526740 RGD:2325861 RGD:4107019 NCBI chrNW_004624752:24,008,520...24,480,834
Ensembl chrNW_004624752:24,135,487...24,459,288 		JBrowse link
G Hmgcs2 3-hydroxy-3-methylglutaryl-CoA synthase 2 ISO carnitine RGD PMID:20508999 RGD:2326106 NCBI chrNW_004624772:15,432,612...15,464,343
Ensembl chrNW_004624772:15,432,198...15,467,797 		JBrowse link
G Hnrnpab heterogeneous nuclear ribonucleoprotein A/B ISO NMDA, AMPA RGD PMID:21471000 RGD:9999187 NCBI chrNW_004624733:41,387,068...41,403,701
Ensembl chrNW_004624733:41,398,123...41,403,617 		JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D ISO N-methyl-D-aspartate RGD PMID:16569663 RGD:10042967 NCBI chrNW_004624757:8,532,373...8,549,840
Ensembl chrNW_004624757:8,531,601...8,549,835 		JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K ISO glycine RGD PMID:24990929 RGD:10002784 NCBI chrNW_004624809:7,538,568...7,548,272 JBrowse link
G Hsf1 heat shock transcription factor 1 ISO homocysteic acid
glutamine, ornithine		 RGD PMID:21512157 PMID:24478344 RGD:10402566 RGD:10402944 NCBI chrNW_004624735:12,536,818...12,562,643
Ensembl chrNW_004624735:12,537,128...12,562,644 		JBrowse link
G Ipo5 importin 5 involved_in ISO (PMID:22730302) UniProt PMID:22730302 NCBI chrNW_004624793:12,971,397...13,004,126
Ensembl chrNW_004624793:12,969,459...13,004,139 		JBrowse link
G Klhl22 kelch like family member 22 involved_in ISO (PMID:29769719) UniProt PMID:29769719 NCBI chrNW_004624945:409,093...446,619
Ensembl chrNW_004624945:408,999...441,975 		JBrowse link
G Lamtor1 late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624817:4,872,630...4,879,217
Ensembl chrNW_004624817:4,872,672...4,890,791 		JBrowse link
G Lamtor2 late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 involved_in ISO (PMID:20381137)
(PMID:22980980)		 UniProt
ComplexPortal		 PMID:20381137 PMID:22980980 NCBI chrNW_004624885:1,399,235...1,403,669
Ensembl chrNW_004624885:1,398,505...1,403,789 		JBrowse link
G Lamtor3 late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624830:7,296,133...7,311,907
Ensembl chrNW_004624830:7,296,458...7,312,186 		JBrowse link
G Lamtor4 late endosomal/lysosomal adaptor, MAPK and MTOR activator 4 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624740:16,752,834...16,756,119
Ensembl chrNW_004624740:16,752,834...16,756,069 		JBrowse link
G Lamtor5 late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 involved_in ISO (PMID:22980980) UniProt PMID:22980980 NCBI chrNW_004624772:6,132,459...6,137,182 JBrowse link
G Lars1 leucyl-tRNA synthetase 1 involved_in ISO (PMID:22424946) CAFA PMID:22424946 NCBI chrNW_004624774:5,609,623...5,673,815
Ensembl chrNW_004624774:5,609,623...5,673,791 		JBrowse link
G LOC101717043 cytochrome b-245 light chain ISO RGD PMID:12241540 RGD:2291907 NCBI chrNW_004624746:911,852...919,361
Ensembl chrNW_004624746:911,842...919,362 		JBrowse link
G Mmp2 matrix metallopeptidase 2 acts_upstream_of_or_within ISO (PMID:20548288) MGI PMID:20548288 NCBI chrNW_004624757:1,450,680...1,479,160
Ensembl chrNW_004624757:1,448,698...1,479,255 		JBrowse link
G Mmp3 matrix metallopeptidase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20548288) Ensembl
MGI		 PMID:20548288 GO_REF:0000107 NCBI chrNW_004624878:39,282...47,386
Ensembl chrNW_004624878:39,358...47,075 		JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in ISO (PMID:22424946) CAFA PMID:22424946 NCBI chrNW_004624818:1,570,155...1,698,264
Ensembl chrNW_004624818:1,570,276...1,698,259 		JBrowse link
G Neurl1 neuralized E3 ubiquitin protein ligase 1 involved_in ISO (PMID:22153079) UniProt PMID:22153079 NCBI chrNW_004624831:2,717,184...2,778,907
Ensembl chrNW_004624831:2,717,226...2,778,977 		JBrowse link
G Nsmf NMDA receptor synaptonuclear signaling and neuronal migration factor involved_in ISO PMID:18303947 UniProt PMID:18303947 RGD:8553324 NCBI chrNW_004624760:575,805...583,410
Ensembl chrNW_004624760:574,920...583,410 		JBrowse link
G Ntrk2 neurotrophic receptor tyrosine kinase 2 acts_upstream_of_or_within ISO (PMID:25542970) MGI PMID:25542970 NCBI chrNW_004624809:8,274,736...8,622,287
Ensembl chrNW_004624809:8,276,951...8,616,765 		JBrowse link
G Pdgfc platelet derived growth factor C acts_upstream_of_or_within ISO (PMID:20548288) MGI PMID:20548288 NCBI chrNW_004624848:1,484,904...1,674,410
Ensembl chrNW_004624848:1,484,947...1,674,641 		JBrowse link
G Pdgfd platelet derived growth factor D acts_upstream_of_or_within ISO (PMID:20548288) MGI PMID:20548288 NCBI chrNW_004624918:1,052,640...1,293,138
Ensembl chrNW_004624918:1,052,567...1,293,192 		JBrowse link
G Pdgfra platelet derived growth factor receptor alpha acts_upstream_of_or_within ISO (PMID:20548288) MGI PMID:20548288 NCBI chrNW_004624761:15,223,789...15,269,685
Ensembl chrNW_004624761:15,225,356...15,269,810 		JBrowse link
G Rbx1 ring-box 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624752:7,547,702...7,560,605
Ensembl chrNW_004624752:7,546,959...7,560,668 		JBrowse link
G Rptor regulatory associated protein of MTOR complex 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624801:9,676,965...10,053,311
Ensembl chrNW_004624801:9,677,307...10,048,719 		JBrowse link
G Rraga Ras related GTP binding A involved_in IEA UniProt GO_REF:0000104 NCBI chrNW_004624736:23,035,836...23,049,574 JBrowse link
G Rragb Ras related GTP binding B involved_in IEA UniProt
Ensembl		 GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004624910:726,467...760,293
Ensembl chrNW_004624910:727,034...760,671 		JBrowse link
G Rragc Ras related GTP binding C involved_in IEA UniProt GO_REF:0000104 NCBI chrNW_004624764:21,460,669...21,475,470
Ensembl chrNW_004624764:21,460,666...21,475,439 		JBrowse link
G Rragd Ras related GTP binding D involved_in IEA UniProt GO_REF:0000104 NCBI chrNW_004624799:4,754,603...4,801,312
Ensembl chrNW_004624799:4,754,917...4,798,609 		JBrowse link
G Sesn1 sestrin 1 involved_in ISO (PMID:25259925) UniProt PMID:25259925 NCBI chrNW_004624916:231,168...332,423
Ensembl chrNW_004624916:230,348...332,985 		JBrowse link
G Sesn2 sestrin 2 involved_in ISO (PMID:25457612)
(PMID:25259925)		 UniProt PMID:25259925 PMID:25457612 NCBI chrNW_004624764:12,087,901...12,135,145
Ensembl chrNW_004624764:12,087,858...12,120,914 		JBrowse link
G Sesn3 sestrin 3 involved_in ISO (PMID:25259925) UniProt PMID:25259925 NCBI chrNW_004624735:39,859,414...39,930,642
Ensembl chrNW_004624735:39,866,097...39,929,614 		JBrowse link
G Sh3bp4 SH3 domain binding protein 4 involved_in ISO (PMID:22575674) UniProt PMID:22575674 NCBI chrNW_004624847:1,007,940...1,078,882
Ensembl chrNW_004624847:1,044,831...1,078,984 		JBrowse link
G Slc38a9 solute carrier family 38 member 9 involved_in ISO (PMID:25561175), (PMID:25567906), (PMID:29053970) UniProt PMID:25561175 PMID:25567906 PMID:29053970 NCBI chrNW_004624759:3,603,510...3,707,000
Ensembl chrNW_004624759:3,606,708...3,706,376 		JBrowse link
G Slc7a5 solute carrier family 7 member 5 ISO RGD PMID:9882595 RGD:151357002 NCBI chrNW_004624746:1,325,368...1,349,616 JBrowse link
G Socs1 suppressor of cytokine signaling 1 acts_upstream_of_or_within ISO (PMID:20548288) MGI PMID:20548288 NCBI chrNW_004624824:8,444,877...8,446,628 JBrowse link
G Tnf tumor necrosis factor acts_upstream_of_or_within ISO (PMID:20548288) MGI PMID:20548288 NCBI chrNW_004624754:24,623,059...24,625,647
Ensembl chrNW_004624754:24,623,425...24,625,531 		JBrowse link
G Xbp1 X-box binding protein 1 involved_in ISO (PMID:24753614) UniProt PMID:24753614 NCBI chrNW_004624747:5,123,085...5,128,465 JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 acts_upstream_of_or_within ISO (PMID:20548288) MGI PMID:20548288 NCBI chrNW_004624805:3,964,448...4,044,546
Ensembl chrNW_004624805:3,964,450...4,042,527 		JBrowse link
cellular response to glycine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agap2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 2 ISO RGD PMID:21847098 RGD:8553599 NCBI chrNW_004624802:10,205,376...10,219,977
Ensembl chrNW_004624802:10,205,375...10,218,288 		JBrowse link
G Fyn FYN proto-oncogene, Src family tyrosine kinase involved_in ISO PMID:17526495 ARUK-UCL PMID:17526495 RGD:13506268 NCBI chrNW_004624933:248,298...456,933
Ensembl chrNW_004624933:389,627...456,520 		JBrowse link
G Gria2 glutamate ionotropic receptor AMPA type subunit 2 ISO RGD PMID:21847098 RGD:8553599 NCBI chrNW_004624848:1,132,939...1,261,110
Ensembl chrNW_004624848:1,135,032...1,261,087 		JBrowse link
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 ISO RGD PMID:23678131 RGD:401940177 NCBI chrNW_004624760:777,208...800,525
Ensembl chrNW_004624760:776,873...801,354 		JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A ISO RGD PMID:23678131 RGD:401940177 NCBI chrNW_004624824:7,128,169...7,513,360
Ensembl chrNW_004624824:7,137,909...7,507,910 		JBrowse link
G Grin3b glutamate ionotropic receptor NMDA type subunit 3B ISO RGD PMID:11823786 RGD:632842 NCBI chrNW_004624828:7,614,656...7,622,111
Ensembl chrNW_004624828:7,614,672...7,622,111 		JBrowse link
G Myo5b myosin VB ISO RGD PMID:18984164 RGD:11533643 NCBI chrNW_004624778:13,352,285...13,740,621
Ensembl chrNW_004624778:13,347,705...13,740,767 		JBrowse link
cellular response to homocysteine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Camk2b calcium/calmodulin dependent protein kinase II beta ISO RGD PMID:25126162 RGD:13681928 NCBI chrNW_004624740:7,750,327...7,828,891
Ensembl chrNW_004624740:7,750,245...7,831,454 		JBrowse link
G Pla2g4a phospholipase A2 group IVA ISO RGD PMID:31125437 RGD:401940166 NCBI chrNW_004624814:6,597,248...6,744,294
Ensembl chrNW_004624814:6,597,005...6,744,286 		JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 ISO RGD PMID:31125437 RGD:401940166 NCBI chrNW_004624814:6,897,818...6,904,890
Ensembl chrNW_004624814:6,897,857...6,903,728 		JBrowse link
cellular response to hydrostatic pressure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fas Fas cell surface death receptor ISO RGD PMID:16226958 RGD:8686427 NCBI chrNW_004624791:15,290,022...15,315,848
Ensembl chrNW_004624791:15,289,348...15,315,848 		JBrowse link
G LOC101702005 aromatase ISO RGD PMID:21047944 RGD:4890042 NCBI chrNW_004624731:9,053,644...9,100,212
Ensembl chrNW_004624731:9,053,803...9,100,212 		JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:22644739 RGD:7240524 NCBI chrNW_004624735:27,780,338...27,784,714
Ensembl chrNW_004624735:27,780,037...27,784,806 		JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha involved_in ISO (PMID:30568254) BHF-UCL PMID:30568254 NCBI chrNW_004624730:56,895,065...56,970,563
Ensembl chrNW_004624730:56,938,215...56,966,137 		JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in ISO (PMID:16025301) BHF-UCL PMID:16025301 NCBI chrNW_004624872:4,539,965...4,592,004
Ensembl chrNW_004624872:4,539,847...4,594,793 		JBrowse link
G Sncg synuclein gamma ISO RGD PMID:11933054 RGD:6480100 NCBI chrNW_004624841:192,396...196,568
Ensembl chrNW_004624841:192,398...196,064 		JBrowse link
G Wnt10b Wnt family member 10B ISO RGD PMID:19118527 RGD:2326236 NCBI chrNW_004624816:3,221,573...3,227,102
Ensembl chrNW_004624816:3,210,828...3,227,096 		JBrowse link
G Wnt4 Wnt family member 4 ISO RGD PMID:19118527 RGD:2326236 NCBI chrNW_004624764:6,913,027...6,934,650
Ensembl chrNW_004624764:6,921,811...6,933,392 		JBrowse link
cellular response to kainic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epor erythropoietin receptor ISO RGD PMID:18711747 RGD:11041671 NCBI chrNW_004624828:3,181,772...3,187,242
Ensembl chrNW_004624828:3,181,957...3,187,231 		JBrowse link
cellular response to L-arginine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Castor1 cytosolic arginine sensor for mTORC1 subunit 1 involved_in ISO (PMID:26972053)
(PMID:26972053), (PMID:33594058)		 UniProt PMID:26972053 PMID:33594058 NCBI chrNW_004624747:6,592,962...6,604,811
Ensembl chrNW_004624747:6,600,335...6,604,890 		JBrowse link
G Slc7a5 solute carrier family 7 member 5 ISO RGD PMID:10681508 RGD:151361135 NCBI chrNW_004624746:1,325,368...1,349,616 JBrowse link
cellular response to L-dopa term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rapgef3 Rap guanine nucleotide exchange factor 3 ISO RGD PMID:25044243 RGD:10041045 NCBI chrNW_004624816:4,496,848...4,519,782
Ensembl chrNW_004624816:4,496,856...4,519,911 		JBrowse link
cellular response to L-glutamate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amigo1 adhesion molecule with Ig like domain 1 ISO RGD PMID:22056818 RGD:14390155 NCBI chrNW_004624772:5,231,266...5,236,703
Ensembl chrNW_004624772:5,231,266...5,236,496 		JBrowse link
G Atp5mc1 ATP synthase membrane subunit c locus 1 ISO RGD PMID:28777375 RGD:13800748 NCBI chrNW_004624795:5,297,475...5,300,526
Ensembl chrNW_004624795:5,297,161...5,301,746 		JBrowse link
G Baiap2 BAR/IMD domain containing adaptor protein 2 ISO RGD PMID:15758177 RGD:9684984 NCBI chrNW_004624801:10,106,815...10,173,191
Ensembl chrNW_004624801:10,106,750...10,173,188 		JBrowse link
G Bcl11a BCL11 transcription factor A ISO RGD PMID:20534004 RGD:11100020 NCBI chrNW_004624833:1,367,878...1,468,257
Ensembl chrNW_004624833:1,367,781...1,468,400 		JBrowse link
G Erbb4 erb-b2 receptor tyrosine kinase 4 ISO RGD PMID:28350885 RGD:405649727 NCBI chrNW_004624765:3,612,781...4,742,219
Ensembl chrNW_004624765:3,613,379...4,734,585 		JBrowse link
G Fmr1 Fragile X messenger ribonucleoprotein 1 ISO RGD PMID:22817682 RGD:11566024 NCBI chrNW_004624883:645,524...681,705
Ensembl chrNW_004624883:645,449...682,292 		JBrowse link
G Fyn FYN proto-oncogene, Src family tyrosine kinase involved_in ISO PMID:17526495 ARUK-UCL PMID:17526495 RGD:13506268 NCBI chrNW_004624933:248,298...456,933
Ensembl chrNW_004624933:389,627...456,520 		JBrowse link
G Gria1 glutamate ionotropic receptor AMPA type subunit 1 ISO RGD PMID:12390532 RGD:405649864 NCBI chrNW_004624733:35,337,039...35,648,184
Ensembl chrNW_004624733:35,339,683...35,647,349 		JBrowse link
G Grin2d glutamate ionotropic receptor NMDA type subunit 2D ISO RGD PMID:15107472 RGD:1642397 NCBI chrNW_004624832:5,362,046...5,392,988
Ensembl chrNW_004624832:5,362,046...5,392,973 		JBrowse link
G Hpca hippocalcin ISO RGD PMID:20704590 RGD:9686447 NCBI chrNW_004624764:15,990,910...15,999,617
Ensembl chrNW_004624764:15,990,729...15,999,615 		JBrowse link
G Lmnb1 lamin B1 ISO RGD PMID:21389115 RGD:10044247 NCBI chrNW_004624774:14,806,585...14,863,543
Ensembl chrNW_004624774:14,805,465...14,863,241 		JBrowse link
G Mfn2 mitofusin 2 ISO RGD PMID:25416777 RGD:13204765 NCBI chrNW_004624818:1,041,371...1,065,061
Ensembl chrNW_004624818:1,041,369...1,065,023 		JBrowse link
G Nrg1 neuregulin 1 ISO RGD PMID:28350885 RGD:405649727 NCBI chrNW_004624780:11,297,306...11,525,236
Ensembl chrNW_004624780:11,301,182...12,424,066 		JBrowse link
G Opa1 OPA1 mitochondrial dynamin like GTPase ISO RGD PMID:28761318 RGD:13432138 NCBI chrNW_004624730:63,911,066...63,994,886
Ensembl chrNW_004624730:63,911,066...63,995,596 		JBrowse link
G Optn optineurin ISO RGD PMID:28761318 RGD:13432138 NCBI chrNW_004624805:5,683,095...5,717,558
Ensembl chrNW_004624805:5,683,021...5,721,336 		JBrowse link
G Pcp4 Purkinje cell protein 4 ISO RGD PMID:18502590 RGD:9850275 NCBI chrNW_004624745:29,630,990...29,682,965
Ensembl chrNW_004624745:29,630,747...29,682,995 		JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase ISO RGD PMID:25478815 RGD:13204761 NCBI chrNW_004624855:430,148...1,992,121
Ensembl chrNW_004624855:430,260...1,989,747 		JBrowse link
cellular response to L-glutamine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hsf1 heat shock transcription factor 1 ISO RGD PMID:23055521 PMID:23185570 RGD:10450472 RGD:10450473 NCBI chrNW_004624735:12,536,818...12,562,643
Ensembl chrNW_004624735:12,537,128...12,562,644 		JBrowse link
G LOC101709509 cytochrome b-245 heavy chain ISO RGD PMID:12241540 RGD:2291907 NCBI chrNW_004624762:17,759,625...17,793,434
Ensembl chrNW_004624762:17,757,404...17,793,467 		JBrowse link
G LOC101717043 cytochrome b-245 light chain ISO RGD PMID:12241540 RGD:2291907 NCBI chrNW_004624746:911,852...919,361
Ensembl chrNW_004624746:911,842...919,362 		JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase ISO RGD PMID:28761318 RGD:13432138 NCBI chrNW_004624855:430,148...1,992,121
Ensembl chrNW_004624855:430,260...1,989,747 		JBrowse link
cellular response to L-leucine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnf1a HNF1 homeobox A ISO RGD PMID:21874357 RGD:150540304 NCBI chrNW_004624747:12,717,713...12,746,040
Ensembl chrNW_004624747:12,717,707...12,746,724 		JBrowse link
G Klhl22 kelch like family member 22 involved_in ISO (PMID:29769719) UniProt PMID:29769719 NCBI chrNW_004624945:409,093...446,619
Ensembl chrNW_004624945:408,999...441,975 		JBrowse link
G Lars1 leucyl-tRNA synthetase 1 involved_in ISO (PMID:22424946) CAFA PMID:22424946 NCBI chrNW_004624774:5,609,623...5,673,815
Ensembl chrNW_004624774:5,609,623...5,673,791 		JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in ISO (PMID:22424946) CAFA PMID:22424946 NCBI chrNW_004624818:1,570,155...1,698,264
Ensembl chrNW_004624818:1,570,276...1,698,259 		JBrowse link
G Rptor regulatory associated protein of MTOR complex 1 involved_in ISO (PMID:22424946) CAFA PMID:22424946 NCBI chrNW_004624801:9,676,965...10,053,311
Ensembl chrNW_004624801:9,677,307...10,048,719 		JBrowse link
G Rragd Ras related GTP binding D involved_in ISO (PMID:22424946) CAFA PMID:22424946 NCBI chrNW_004624799:4,754,603...4,801,312
Ensembl chrNW_004624799:4,754,917...4,798,609 		JBrowse link
G Sesn1 sestrin 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624916:231,168...332,423
Ensembl chrNW_004624916:230,348...332,985 		JBrowse link
G Sesn2 sestrin 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624764:12,087,901...12,135,145
Ensembl chrNW_004624764:12,087,858...12,120,914 		JBrowse link
G Sesn3 sestrin 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624735:39,859,414...39,930,642
Ensembl chrNW_004624735:39,866,097...39,929,614 		JBrowse link
G Stambpl1 STAM binding protein like 1 involved_in ISO (PMID:35114100) UniProt PMID:35114100 NCBI chrNW_004624791:15,185,185...15,231,854
Ensembl chrNW_004624791:15,186,030...15,234,162 		JBrowse link
G Ubr1 ubiquitin protein ligase E3 component n-recognin 1 involved_in ISO (PMID:20298436) UniProt PMID:20298436 NCBI chrNW_004624804:10,035,122...10,225,640
Ensembl chrNW_004624804:10,036,225...10,225,571 		JBrowse link
G Ubr2 ubiquitin protein ligase E3 component n-recognin 2 involved_in ISO (PMID:20298436) UniProt PMID:20298436 NCBI chrNW_004624754:16,701,950...16,798,293
Ensembl chrNW_004624754:16,701,331...16,798,897 		JBrowse link
cellular response to methionine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmt2 base methyltransferase of 25S rRNA 2 homolog involved_in ISO (PMID:29123071), (PMID:35776786) UniProt PMID:29123071 PMID:35776786 NCBI chrNW_004624827:6,434,583...6,509,481
Ensembl chrNW_004624827:6,434,483...6,509,446 		JBrowse link
G Mapk1 mitogen-activated protein kinase 1 ISO RGD PMID:22676582 RGD:405100711 NCBI chrNW_004624747:1,296,062...1,389,674
Ensembl chrNW_004624747:1,296,221...1,389,757 		JBrowse link
G Mat2a methionine adenosyltransferase 2A involved_in ISO (PMID:38006878) UniProt PMID:38006878 NCBI chrNW_004624749:17,596,381...17,603,804
Ensembl chrNW_004624749:17,596,381...17,603,867 		JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in ISO (PMID:38006878) UniProt PMID:38006878 NCBI chrNW_004624818:1,570,155...1,698,264
Ensembl chrNW_004624818:1,570,276...1,698,259 		JBrowse link
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase ISO RGD PMID:1201245 RGD:6893692 NCBI chrNW_004624775:13,791,690...13,903,888
Ensembl chrNW_004624775:13,792,043...13,896,559 		JBrowse link
G Nfe2l2 NFE2 like bZIP transcription factor 2 ISO RGD PMID:22676582 RGD:405100711 NCBI chrNW_004624787:14,355,330...14,381,353
Ensembl chrNW_004624787:14,355,791...14,381,251 		JBrowse link
G Prmt1 protein arginine methyltransferase 1 involved_in ISO (PMID:38006878) UniProt PMID:38006878 NCBI chrNW_004624832:4,593,594...4,602,514
Ensembl chrNW_004624832:4,589,743...4,602,402 		JBrowse link
cellular response to phenylalanine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fas Fas cell surface death receptor ISO RGD PMID:23940767 RGD:8663468 NCBI chrNW_004624791:15,290,022...15,315,848
Ensembl chrNW_004624791:15,289,348...15,315,848 		JBrowse link
cellular response to thyroxine stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gclc glutamate-cysteine ligase catalytic subunit ISO RGD PMID:17291985 RGD:10402376 NCBI chrNW_004624850:749,046...793,654
Ensembl chrNW_004624850:749,050...793,959 		JBrowse link
G Gclm glutamate-cysteine ligase modifier subunit ISO RGD PMID:17291985 RGD:10402376 NCBI chrNW_004624742:3,713,275...3,746,219
Ensembl chrNW_004624742:3,713,250...3,743,290 		JBrowse link
G L1cam L1 cell adhesion molecule ISO RGD PMID:11085884 RGD:11570514 NCBI chrNW_004624946:512,413...533,669
Ensembl chrNW_004624946:513,297...525,009 		JBrowse link
cellular response to water deprivation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp2 aquaporin 2 acts_upstream_of_or_within ISO (PMID:10191086) RGD
MGI		 PMID:10191086 PMID:15196935 RGD:2313141 NCBI chrNW_004624816:2,332,477...2,340,797
Ensembl chrNW_004624816:2,335,471...2,340,828 		JBrowse link
G Avpr1a arginine vasopressin receptor 1A ISO RGD PMID:11796498 RGD:70387 NCBI chrNW_004624802:4,893,172...4,900,177
Ensembl chrNW_004624802:4,894,235...4,900,276 		JBrowse link
G Sipa1 signal-induced proliferation-associated 1 ISO RGD PMID:15196935 RGD:2313141 NCBI chrNW_004624767:20,745,125...20,757,243
Ensembl chrNW_004624767:20,745,168...20,757,219 		JBrowse link
cellular stress response to acid chemical term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Klf2 KLF transcription factor 2 involved_in ISO (PMID:26299712) BHF-UCL PMID:26299712 NCBI chrNW_004624908:1,021,865...1,023,279 JBrowse link
G Vegfa vascular endothelial growth factor A involved_in ISO (PMID:26299712) BHF-UCL PMID:26299712 NCBI chrNW_004624754:15,929,414...15,943,637 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15172
    response to stimulus 8181
      response to chemical 4392
        response to acid chemical 220
          cellular response to acid chemical 123
            cellular response to amino acid stimulus + 111
            cellular response to water stimulus + 11
            cellular stress response to acid chemical 2
paths to the root