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ONTOLOGY REPORT - ANNOTATIONS


Term:cellular response to lipopolysaccharide
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Accession:GO:0071222 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria.
Synonyms:exact_synonym: cellular response to LPS
 broad_synonym: cellular response to endotoxin


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cellular response to lipopolysaccharide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA1 ATP binding cassette subfamily A member 1 IEA Ensembl GO_REF:0000107 NCBI chr 9:104,781,006...104,928,232
Ensembl chr 9:104,781,006...104,928,155
JBrowse link
G ABCC2 ATP binding cassette subfamily C member 2 IEA Ensembl GO_REF:0000107 NCBI chr10:99,782,602...99,853,741
Ensembl chr10:99,782,640...99,852,594
JBrowse link
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase IEA Ensembl GO_REF:0000107 NCBI chr 9:130,713,881...130,887,675
Ensembl chr 9:130,713,016...130,887,675
JBrowse link
G ACOD1 aconitate decarboxylase 1 IDA (PMID:23609450), (PMID:23610393) UniProtKB PMID:23609450, PMID:23610393 NCBI chr13:76,948,511...76,958,638
Ensembl chr13:76,948,511...76,958,638
JBrowse link
G ADAM9 ADAM metallopeptidase domain 9 IMP (PMID:22480688) BHF-UCL PMID:22480688 NCBI chr 8:38,996,767...39,105,261
Ensembl chr 8:38,996,869...39,105,261
JBrowse link
G ADAMTS13 ADAM metallopeptidase with thrombospondin type 1 motif 13 IEA Ensembl GO_REF:0000107 NCBI chr 9:133,414,337...133,459,403
Ensembl chr 9:133,414,358...133,459,402
JBrowse link
G AICDA activation induced cytidine deaminase IEA Ensembl GO_REF:0000107 NCBI chr12:8,602,170...8,612,970
Ensembl chr12:8,602,170...8,612,867
JBrowse link
G AKAP8 A-kinase anchoring protein 8 IEA Ensembl GO_REF:0000107 NCBI chr19:15,353,385...15,379,787
Ensembl chr19:15,353,385...15,379,798
JBrowse link
G ANKRD1 ankyrin repeat domain 1 IDA (PMID:7730328) BHF-UCL PMID:7730328 NCBI chr10:90,912,096...90,921,087
Ensembl chr10:90,912,096...90,921,087
Ensembl chr10:90,912,096...90,921,087
JBrowse link
G ARG1 arginase 1 IEA Ensembl GO_REF:0000107 NCBI chr 6:131,573,226...131,584,329
Ensembl chr 6:131,470,832...131,584,332
JBrowse link
G ARG2 arginase 2 ISO RGD PMID:11250887 RGD:4144048 NCBI chr14:67,619,920...67,651,708
Ensembl chr14:67,619,920...67,651,708
JBrowse link
G ARID5A AT-rich interaction domain 5A ISO (MGI:MGI:5887181|PMID:27671645) UniProtKB PMID:27671645 MGI:MGI:5887181 NCBI chr 2:96,536,752...96,552,638
Ensembl chr 2:96,536,743...96,552,634
JBrowse link
G ASS1 argininosuccinate synthase 1 IEA Ensembl GO_REF:0000107 NCBI chr 9:130,444,707...130,501,274
Ensembl chr 9:130,444,961...130,501,274
JBrowse link
G AXL AXL receptor tyrosine kinase IDA (PMID:19657094) UniProtKB PMID:19657094 NCBI chr19:41,219,223...41,261,766
Ensembl chr19:41,219,223...41,261,766
JBrowse link
G B2M beta-2-microglobulin IDA (PMID:23144825) UniProt PMID:23144825 NCBI chr15:44,711,492...44,718,145
Ensembl chr15:44,711,487...44,718,877
JBrowse link
G BCL10 BCL10 immune signaling adaptor IEP (PMID:16831874) UniProt PMID:16831874 NCBI chr 1:85,265,776...85,276,632
Ensembl chr 1:85,265,776...85,276,632
JBrowse link
G BCR BCR activator of RhoGEF and GTPase IEA Ensembl GO_REF:0000107 NCBI chr22:23,180,509...23,318,037
Ensembl chr22:23,179,704...23,318,037
JBrowse link
G BPI bactericidal permeability increasing protein IDA (PMID:1937776) UniProt PMID:1937776 NCBI chr20:38,304,156...38,337,505
Ensembl chr20:38,304,150...38,337,505
Ensembl chr20:38,304,150...38,337,505
JBrowse link
G BYSL bystin like ISO RGD PMID:15305856 RGD:2316201 NCBI chr 6:41,921,499...41,933,046
Ensembl chr 6:41,921,499...41,933,046
JBrowse link
G CACTIN cactin, spliceosome C complex subunit IDA (PMID:20829348) UniProtKB PMID:20829348 NCBI chr19:3,610,645...3,626,810
Ensembl chr19:3,610,645...3,626,815
JBrowse link
G CAMP cathelicidin antimicrobial peptide IEA Ensembl GO_REF:0000107 NCBI chr 3:48,223,495...48,225,485
Ensembl chr 3:48,223,347...48,225,491
JBrowse link
G CAPN2 calpain 2 IEA Ensembl GO_REF:0000107 NCBI chr 1:223,701,597...223,776,018
Ensembl chr 1:223,701,593...223,776,018
JBrowse link
G CARD16 caspase recruitment domain family member 16 IDA (PMID:15383541) UniProtKB PMID:15383541 NCBI chr11:105,040,218...105,045,416
Ensembl chr11:105,041,326...105,101,431
JBrowse link
G CARD17 caspase recruitment domain family member 17 IDA (PMID:15383541) UniProtKB PMID:15383541 NCBI chr11:105,080,453...105,101,492
Ensembl chr11:105,092,469...105,101,431
JBrowse link
G CASP1 caspase 1 IMP (PMID:11536016) UniProtKB PMID:11536016 NCBI chr11:105,025,443...105,035,591
Ensembl chr11:105,025,443...105,035,250
JBrowse link
G CCL2 C-C motif chemokine ligand 2 ISS BHF-UCL GO_REF:0000024 NCBI chr17:34,255,285...34,257,203
Ensembl chr17:34,255,218...34,257,203
JBrowse link
G CCL20 C-C motif chemokine ligand 20 ISO RGD PMID:15618187 RGD:7483631 NCBI chr 2:227,813,842...227,817,556
Ensembl chr 2:227,805,739...227,817,564
JBrowse link
G CCL5 C-C motif chemokine ligand 5 ISO RGD PMID:20578038 RGD:4889899 NCBI chr17:35,871,491...35,880,360
Ensembl chr17:35,871,491...35,880,793
JBrowse link
G CCR5 C-C motif chemokine receptor 5 IEP (PMID:10679098) UniProtKB PMID:10679098 NCBI chr 3:46,370,142...46,376,206
Ensembl chr 3:46,370,854...46,376,206
JBrowse link
G CD14 CD14 molecule IDA
IBA
IMP
(PMID:12594207)
(PMID:21873635)
(PMID:8612135)
MGI
GO_Central
UniProtKB
PMID:8612135, PMID:12594207, PMID:21873635 NCBI chr 5:140,631,732...140,633,701
Ensembl chr 5:140,631,728...140,633,701
JBrowse link
G CD180 CD180 molecule IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:67,179,613...67,196,799
Ensembl chr 5:67,179,613...67,196,799
JBrowse link
G CD274 CD274 molecule IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:5,450,542...5,470,554
Ensembl chr 9:5,450,503...5,470,566
JBrowse link
G CD300LB CD300 molecule like family member b ISO (MGI:MGI:5446972|PMID:22772446) MGI PMID:22772446 MGI:MGI:5446972 NCBI chr17:74,521,174...74,531,475
Ensembl chr17:74,521,174...74,531,475
JBrowse link
G CD36 CD36 molecule IEA Ensembl GO_REF:0000107 NCBI chr 7:80,602,207...80,679,277
Ensembl chr 7:80,369,575...80,679,277
JBrowse link
G CD40 CD40 molecule IEA Ensembl GO_REF:0000107 NCBI chr20:46,118,242...46,129,858
Ensembl chr20:46,118,278...46,129,863
JBrowse link
G CD68 CD68 molecule ISS ARUK-UCL GO_REF:0000024 NCBI chr17:7,579,638...7,582,111
Ensembl chr17:7,579,491...7,582,111
JBrowse link
G CD80 CD80 molecule IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:119,524,293...119,559,614
Ensembl chr 3:119,524,293...119,559,614
JBrowse link
G CD86 CD86 molecule IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:122,055,362...122,121,136
Ensembl chr 3:122,055,362...122,121,139
JBrowse link
G CDC73 cell division cycle 73 ISS UniProtKB GO_REF:0000024 NCBI chr 1:193,122,031...193,254,815
Ensembl chr 1:193,121,958...193,254,815
Ensembl chr 1:193,121,958...193,254,815
JBrowse link
G CDK19 cyclin dependent kinase 19 IEA Ensembl GO_REF:0000107 NCBI chr 6:110,609,978...110,816,531
Ensembl chr 6:110,609,978...110,815,958
JBrowse link
G CDK4 cyclin dependent kinase 4 IEA Ensembl GO_REF:0000107 NCBI chr12:57,747,727...57,752,310
Ensembl chr12:57,747,727...57,756,013
JBrowse link
G CEBPB CCAAT enhancer binding protein beta IEA Ensembl GO_REF:0000107 NCBI chr20:50,190,583...50,192,690
Ensembl chr20:50,190,830...50,192,668
JBrowse link
G CEBPE CCAAT enhancer binding protein epsilon IEA Ensembl GO_REF:0000107 NCBI chr14:23,117,306...23,119,255
Ensembl chr14:23,117,304...23,119,616
JBrowse link
G CFH complement factor H ISO (MGI:MGI:4421084|PMID:19828624) RGD
MGI
PMID:12121434, PMID:19828624 MGI:MGI:4421084, RGD:632369 NCBI chr 1:196,652,033...196,747,504
Ensembl chr 1:196,652,043...196,747,504
Ensembl chr 1:196,652,043...196,747,504
JBrowse link
G CHMP5 charged multivesicular body protein 5 IMP (PMID:27812135) UniProtKB PMID:27812135 NCBI chr 9:33,265,049...33,282,070
Ensembl chr 9:33,264,879...33,282,070
JBrowse link
G CMPK2 cytidine/uridine monophosphate kinase 2 IEA Ensembl GO_REF:0000107 NCBI chr 2:6,840,417...6,866,635
Ensembl chr 2:6,840,570...6,866,635
JBrowse link
G CPEB1 cytoplasmic polyadenylation element binding protein 1 IEA Ensembl GO_REF:0000107 NCBI chr15:82,543,201...82,648,795
Ensembl chr15:82,543,201...82,648,861
JBrowse link
G CR2 complement C3d receptor 2 ISO (MGI:MGI:4421084|PMID:19828624) MGI PMID:19828624 MGI:MGI:4421084 NCBI chr 1:207,454,328...207,489,892
Ensembl chr 1:207,454,230...207,489,895
JBrowse link
G CSF2 colony stimulating factor 2 IEA Ensembl GO_REF:0000107 NCBI chr 5:132,073,789...132,076,170
Ensembl chr 5:132,073,789...132,076,170
JBrowse link
G CSF3 colony stimulating factor 3 IEA Ensembl GO_REF:0000107 NCBI chr17:40,015,440...40,017,813
Ensembl chr17:40,015,361...40,017,813
JBrowse link
G CTR9 CTR9 homolog, Paf1/RNA polymerase II complex component ISS UniProtKB GO_REF:0000024 NCBI chr11:10,751,246...10,779,746
Ensembl chr11:10,751,246...10,801,625
JBrowse link
G CTSG cathepsin G IDA (PMID:1937776) UniProtKB PMID:1937776 NCBI chr14:24,573,518...24,576,250
Ensembl chr14:24,573,518...24,576,250
JBrowse link
G CX3CR1 C-X3-C motif chemokine receptor 1 ISS ARUK-UCL GO_REF:0000024 NCBI chr 3:39,263,494...39,281,735
Ensembl chr 3:39,263,494...39,281,735
Ensembl chr 3:39,263,494...39,281,735
JBrowse link
G CXCL1 C-X-C motif chemokine ligand 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:73,869,393...73,871,308
Ensembl chr 4:73,869,393...73,871,308
JBrowse link
G CXCL10 C-X-C motif chemokine ligand 10 IMP
IBA
(PMID:23776175)
(PMID:21873635)
MGI
GO_Central
PMID:21873635, PMID:23776175 NCBI chr 4:76,021,118...76,023,497
Ensembl chr 4:76,021,118...76,023,497
JBrowse link
G CXCL11 C-X-C motif chemokine ligand 11 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:76,033,682...76,036,070
Ensembl chr 4:76,033,682...76,041,415
JBrowse link
G CXCL13 C-X-C motif chemokine ligand 13 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:77,511,753...77,611,834
Ensembl chr 4:77,511,753...77,611,834
JBrowse link
G CXCL16 C-X-C motif chemokine ligand 16 ISO (MGI:MGI:1891794|PMID:11017100) UniProtKB PMID:11017100 MGI:MGI:1891794 NCBI chr17:4,733,533...4,739,928
Ensembl chr17:4,733,533...4,739,928
Ensembl chr17:4,733,533...4,739,928
JBrowse link
G CXCL2 C-X-C motif chemokine ligand 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:74,097,040...74,099,195
Ensembl chr 4:74,097,040...74,099,196
JBrowse link
G CXCL3 C-X-C motif chemokine ligand 3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:74,036,589...74,038,689
Ensembl chr 4:74,036,589...74,038,807
JBrowse link
G CXCL5 C-X-C motif chemokine ligand 5 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:73,995,642...73,998,677
Ensembl chr 4:73,995,642...73,998,677
JBrowse link
G CXCL6 C-X-C motif chemokine ligand 6 IDA
IBA
(PMID:8399143)
(PMID:21873635)
UniProtKB
GO_Central
PMID:8399143, PMID:21873635 NCBI chr 4:73,836,678...73,838,760
Ensembl chr 4:73,836,640...73,849,064
JBrowse link
G CXCL8 C-X-C motif chemokine ligand 8 IDA
IBA
(PMID:19912257)
(PMID:21873635)
BHF-UCL
GO_Central
PMID:19912257, PMID:21873635 NCBI chr 4:73,740,569...73,743,716
Ensembl chr 4:73,740,541...73,743,716
JBrowse link
G CXCL9 C-X-C motif chemokine ligand 9 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:76,001,275...76,007,509
Ensembl chr 4:76,001,275...76,007,509
JBrowse link
G CYP11A1 cytochrome P450 family 11 subfamily A member 1 ISO RGD PMID:20665543 RGD:4145535 NCBI chr15:74,337,762...74,367,646
Ensembl chr15:74,337,759...74,367,646
JBrowse link
G CYP17A1 cytochrome P450 family 17 subfamily A member 1 ISO RGD PMID:20665543 RGD:4145535 NCBI chr10:102,830,531...102,837,413
Ensembl chr10:102,830,531...102,837,472
JBrowse link
G DAB2IP DAB2 interacting protein IDA (PMID:19948740) UniProtKB PMID:19948740 NCBI chr 9:121,566,883...121,785,530
Ensembl chr 9:121,567,057...121,785,530
JBrowse link
G DEFA1 defensin alpha 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 8:6,977,649...6,980,120
Ensembl chr 8:6,977,649...6,980,080
JBrowse link
G DEFA1B defensin alpha 1B IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 8:6,996,766...6,999,202
Ensembl chr 8:6,996,766...6,999,195
JBrowse link
G DEFA3 defensin alpha 3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 8:7,015,869...7,018,336
Ensembl chr 8:7,015,869...7,018,297
JBrowse link
G DEFA4 defensin alpha 4 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 8:6,935,820...6,938,306
Ensembl chr 8:6,935,820...6,938,306
JBrowse link
G DEFA5 defensin alpha 5 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 8:7,055,304...7,056,739
Ensembl chr 8:7,055,304...7,056,739
JBrowse link
G DEFA6 defensin alpha 6 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 8:6,924,697...6,926,076
Ensembl chr 8:6,924,697...6,926,076
JBrowse link
G EDNRB endothelin receptor type B IEA Ensembl GO_REF:0000107 NCBI chr13:77,895,481...77,975,527
Ensembl chr13:77,895,481...77,975,529
JBrowse link
G ENTPD1 ectonucleoside triphosphate diphosphohydrolase 1 ISO RGD PMID:23990338 RGD:9685490 NCBI chr10:95,710,901...95,877,266
Ensembl chr10:95,711,779...95,877,266
JBrowse link
G ENTPD2 ectonucleoside triphosphate diphosphohydrolase 2 ISO RGD PMID:23990338 RGD:9685490 NCBI chr 9:137,048,107...137,054,061
Ensembl chr 9:137,048,107...137,054,061
JBrowse link
G EPAS1 endothelial PAS domain protein 1 ISO RGD PMID:12099714 RGD:11041576 NCBI chr 2:46,297,407...46,386,697
Ensembl chr 2:46,293,667...46,386,697
JBrowse link
G FCAR Fc fragment of IgA receptor IDA (PMID:25339672) CAFA PMID:25339672 NCBI chr19:54,874,231...54,891,420
Ensembl chr19:54,874,235...54,891,420
JBrowse link
G FCGR2B Fc fragment of IgG receptor IIb ISO RGD PMID:19106808 RGD:5147925 NCBI chr 1:161,647,243...161,678,654
Ensembl chr 1:161,663,147...161,678,654
JBrowse link
G FCGR3A Fc fragment of IgG receptor IIIa ISO RGD PMID:19106808 RGD:5147925 NCBI chr 1:161,541,759...161,550,737
Ensembl chr 1:161,541,759...161,550,737
JBrowse link
G FGFR1 fibroblast growth factor receptor 1 ISO RGD PMID:30250515 RGD:25330356 NCBI chr 8:38,411,143...38,468,635
Ensembl chr 8:38,400,215...38,468,834
JBrowse link
G FN1 fibronectin 1 ISO RGD PMID:11819312 RGD:7205475 NCBI chr 2:215,360,862...215,436,167
Ensembl chr 2:215,360,440...215,436,073
JBrowse link
G FP565260.3 ICOS ligand IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr21:5,022,044...5,046,678
Ensembl chr21:5,022,493...5,040,666
JBrowse link
G FUBP1 far upstream element binding protein 1 ISO RGD PMID:23797733 RGD:13673879 NCBI chr 1:77,944,055...77,979,435
Ensembl chr 1:77,944,055...77,979,110
JBrowse link
G GATA1 GATA binding protein 1 ISO RGD PMID:17687519 RGD:5131526 NCBI chr  X:48,786,540...48,794,311
Ensembl chr  X:48,786,562...48,794,311
Ensembl chr  X:48,786,562...48,794,311
JBrowse link
G GBP2 guanylate binding protein 2 ISO (MGI:MGI:4412460|PMID:18025219) MGI PMID:18025219 MGI:MGI:4412460 NCBI chr 1:89,106,132...89,126,114
Ensembl chr 1:89,106,132...89,150,456
JBrowse link
G GFER growth factor, augmenter of liver regeneration ISO RGD PMID:23073658 RGD:9685733 NCBI chr16:1,984,193...1,987,749
Ensembl chr16:1,984,193...1,987,749
JBrowse link
G GFI1 growth factor independent 1 transcriptional repressor IEP (PMID:20547752) UniProtKB PMID:20547752 NCBI chr 1:92,473,043...92,486,925
Ensembl chr 1:92,473,043...92,486,925
JBrowse link
G GHSR growth hormone secretagogue receptor IEA Ensembl GO_REF:0000107 NCBI chr 3:172,443,291...172,448,456
Ensembl chr 3:172,443,291...172,448,456
JBrowse link
G GRK6 G protein-coupled receptor kinase 6 ISO RGD PMID:23359120 RGD:13792782 NCBI chr 5:177,426,496...177,442,891
Ensembl chr 5:177,403,204...177,442,901
JBrowse link
G GSTP1 glutathione S-transferase pi 1 ISS BHF-UCL GO_REF:0000024 NCBI chr11:67,583,812...67,586,653
Ensembl chr11:67,583,742...67,586,656
Ensembl chr11:67,583,742...67,586,656
JBrowse link
G HAMP hepcidin antimicrobial peptide IEA Ensembl GO_REF:0000107 NCBI chr19:35,282,528...35,285,143
Ensembl chr19:35,280,716...35,285,143
JBrowse link
G HAVCR2 hepatitis A virus cellular receptor 2 IEA Ensembl GO_REF:0000107 NCBI chr 5:157,085,832...157,109,044
Ensembl chr 5:157,085,832...157,142,869
JBrowse link
G HDAC5 histone deacetylase 5 IEA Ensembl GO_REF:0000107 NCBI chr17:44,076,753...44,123,651
Ensembl chr17:44,076,746...44,123,702
JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha ISO RGD PMID:19940979 RGD:5147884 NCBI chr14:61,695,513...61,748,259
Ensembl chr14:61,695,513...61,748,259
JBrowse link
G HMGB1 high mobility group box 1 ISS ARUK-UCL GO_REF:0000024 NCBI chr13:30,456,704...30,617,597
Ensembl chr13:30,456,704...30,617,597
JBrowse link
G HMGB2 high mobility group box 2 IEP (PMID:19811285) UniProtKB PMID:19811285 NCBI chr 4:173,331,376...173,334,358
Ensembl chr 4:173,331,376...173,334,432
JBrowse link
G HMGCS2 3-hydroxy-3-methylglutaryl-CoA synthase 2 ISO RGD PMID:11578593 RGD:1599044 NCBI chr 1:119,747,996...119,768,932
Ensembl chr 1:119,748,002...119,768,905
Ensembl chr 1:119,748,002...119,768,905
JBrowse link
G HNRNPM heterogeneous nuclear ribonucleoprotein M ISO RGD PMID:14597422 RGD:10054261 NCBI chr19:8,444,575...8,489,114
Ensembl chr19:8,444,767...8,489,114
JBrowse link
G HSF1 heat shock transcription factor 1 IEA Ensembl GO_REF:0000107 NCBI chr 8:144,291,603...144,314,720
Ensembl chr 8:144,291,591...144,314,720
JBrowse link
G ICAM1 intercellular adhesion molecule 1 IEA Ensembl GO_REF:0000107 NCBI chr19:10,271,120...10,286,615
Ensembl chr19:10,271,093...10,286,615
JBrowse link
G IFNG interferon gamma ISO (MGI:MGI:3821815|PMID:18791161) MGI PMID:18791161 MGI:MGI:3821815 NCBI chr12:68,154,768...68,159,740
Ensembl chr12:68,154,768...68,159,740
JBrowse link
G IL10 interleukin 10 NAS (PMID:14971032) BHF-UCL PMID:14971032 NCBI chr 1:206,767,602...206,772,494
Ensembl chr 1:206,767,602...206,774,541
JBrowse link
G IL12A interleukin 12A IEA Ensembl GO_REF:0000107 NCBI chr 3:159,988,835...159,996,019
Ensembl chr 3:159,988,835...159,996,019
JBrowse link
G IL12B interleukin 12B IEA Ensembl GO_REF:0000107 NCBI chr 5:159,314,780...159,330,487
Ensembl chr 5:159,314,780...159,330,487
Ensembl chr 5:159,314,780...159,330,487
JBrowse link
G IL18 interleukin 18 ISO RGD PMID:11739527 RGD:729357 NCBI chr11:112,143,251...112,164,104
Ensembl chr11:112,143,253...112,164,096
JBrowse link
G IL1A interleukin 1 alpha IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:112,773,925...112,784,493
Ensembl chr 2:112,773,925...112,784,493
Ensembl chr 2:112,773,925...112,784,493
JBrowse link
G IL1B interleukin 1 beta IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:112,829,751...112,836,843
Ensembl chr 2:112,829,751...112,836,816
JBrowse link
G IL1F10 interleukin 1 family member 10 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:113,067,970...113,075,843
Ensembl chr 2:113,067,970...113,075,843
JBrowse link
G IL24 interleukin 24 IEA Ensembl GO_REF:0000107 NCBI chr 1:206,897,404...206,904,139
Ensembl chr 1:206,897,443...206,904,139
JBrowse link
G IL36A interleukin 36 alpha IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:113,005,459...113,011,071
Ensembl chr 2:113,005,459...113,008,044
JBrowse link
G IL36B interleukin 36 beta IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:113,022,089...113,052,867
Ensembl chr 2:113,022,089...113,052,867
JBrowse link
G IL36G interleukin 36 gamma IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:112,978,006...112,985,658
Ensembl chr 2:112,973,203...112,985,658
JBrowse link
G IL36RN interleukin 36 receptor antagonist IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:113,058,638...113,064,744
Ensembl chr 2:113,058,638...113,065,382
JBrowse link
G IL37 interleukin 37 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:112,911,165...112,918,882
Ensembl chr 2:112,912,971...112,918,882
JBrowse link
G IL6 interleukin 6 IMP (PMID:23776175) MGI PMID:23776175 NCBI chr 7:22,725,889...22,732,002
Ensembl chr 7:22,725,884...22,732,002
JBrowse link
G IRAK1 interleukin 1 receptor associated kinase 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:154,010,507...154,019,984
Ensembl chr  X:154,010,506...154,019,902
JBrowse link
G IRF3 interferon regulatory factor 3 ISO (MGI:MGI:5013875|PMID:21606371) MGI PMID:21606371 MGI:MGI:5013875 NCBI chr19:49,659,572...49,665,857
Ensembl chr19:49,659,569...49,665,875
JBrowse link
G IRF8 interferon regulatory factor 8 IEA Ensembl GO_REF:0000107 NCBI chr16:85,899,162...85,922,609
Ensembl chr16:85,899,162...85,922,606
JBrowse link
G IRGM immunity related GTPase M IMP (PMID:25891078) UniProtKB PMID:25891078 NCBI chr 5:150,846,521...150,902,402
Ensembl chr 5:150,846,523...150,900,736
JBrowse link
G JAK2 Janus kinase 2 ISO (MGI:MGI:5013875|PMID:21606371) MGI PMID:21606371 MGI:MGI:5013875 NCBI chr 9:4,984,390...5,129,948
Ensembl chr 9:4,984,390...5,128,183
Ensembl chr 9:4,984,390...5,128,183
JBrowse link
G JUN Jun proto-oncogene, AP-1 transcription factor subunit ISO (PMID:25110868) AgBase PMID:25110868 NCBI chr 1:58,780,791...58,784,047
Ensembl chr 1:58,780,791...58,784,047
JBrowse link
G KLRC4-KLRK1 KLRC4-KLRK1 readthrough IEA Ensembl GO_REF:0000107 NCBI chr12:10,372,353...10,410,146
Ensembl chr12:10,372,353...10,410,146
Ensembl chr12:10,372,353...10,410,146
JBrowse link
G KLRK1 killer cell lectin like receptor K1 IEA Ensembl GO_REF:0000107 NCBI chr12:10,372,353...10,390,041
Ensembl chr12:10,372,353...10,391,874
JBrowse link
G KMO kynurenine 3-monooxygenase IEA Ensembl GO_REF:0000107 NCBI chr 1:241,531,883...241,595,642
Ensembl chr 1:241,532,134...241,595,642
JBrowse link
G LBP lipopolysaccharide binding protein IDA
IMP
(PMID:12594207)
(PMID:24120359)
MGI
UniProtKB
PMID:12594207, PMID:24120359 NCBI chr20:38,346,482...38,377,013
Ensembl chr20:38,346,482...38,377,013
JBrowse link
G LCN2 lipocalin 2 IEA Ensembl GO_REF:0000107 NCBI chr 9:128,149,453...128,153,453
Ensembl chr 9:128,149,071...128,153,453
JBrowse link
G LDOC1 LDOC1 regulator of NFKB signaling IMP (PMID:27812135) UniProtKB PMID:27812135 NCBI chr  X:141,173,235...141,177,129
Ensembl chr  X:141,111,605...141,177,129
JBrowse link
G LILRB1 leukocyte immunoglobulin like receptor B1 IEP (PMID:18094328) UniProtKB PMID:18094328 NCBI chr19:54,616,939...54,637,925
Ensembl chr19:54,617,158...54,637,528
JBrowse link
G LILRB2 leukocyte immunoglobulin like receptor B2 IMP (PMID:14971032) BHF-UCL PMID:14971032 NCBI chr19:54,273,812...54,281,110
Ensembl chr19:54,273,821...54,281,184
JBrowse link
G LITAF lipopolysaccharide induced TNF factor IEA Ensembl GO_REF:0000107 NCBI chr16:11,547,722...11,636,377
Ensembl chr16:11,547,722...11,636,381
JBrowse link
G LTC4S leukotriene C4 synthase ISO RGD PMID:9794912 RGD:2316634 NCBI chr 5:179,793,986...179,796,647
Ensembl chr 5:179,793,980...179,796,647
JBrowse link
G LY96 lymphocyte antigen 96 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 8:73,991,275...74,099,807
Ensembl chr 8:73,991,392...74,029,079
JBrowse link
G MALT1 MALT1 paracaspase ISO (PMID:16831874) UniProt PMID:16831874 NCBI chr18:58,671,420...58,754,477
Ensembl chr18:58,671,465...58,754,477
JBrowse link
G MAP2K3 mitogen-activated protein kinase kinase 3 ISO RGD PMID:14670949 RGD:7495812 NCBI chr17:21,284,679...21,315,240
Ensembl chr17:21,284,672...21,315,232
JBrowse link
G MAP2K7 mitogen-activated protein kinase kinase 7 ISO (MGI:MGI:1101248|PMID:9405446) UniProt PMID:9405446 MGI:MGI:1101248 NCBI chr19:7,903,785...7,914,478
Ensembl chr19:7,903,843...7,914,478
JBrowse link
G MAPK14 mitogen-activated protein kinase 14 IDA (PMID:23776175) MGI PMID:23776175 NCBI chr 6:36,027,711...36,122,964
Ensembl chr 6:36,027,677...36,111,236
JBrowse link
G MAPK8 mitogen-activated protein kinase 8 IDA (PMID:23776175) MGI PMID:23776175 NCBI chr10:48,306,673...48,439,360
Ensembl chr10:48,306,639...48,439,360
JBrowse link
G MAPK9 mitogen-activated protein kinase 9 ISO RGD PMID:9475517 RGD:2304245 NCBI chr 5:180,233,143...180,292,083
Ensembl chr 5:180,233,143...180,292,099
JBrowse link
G MEF2C myocyte enhancer factor 2C ISS UniProtKB GO_REF:0000024 NCBI chr 5:88,717,117...88,904,105
Ensembl chr 5:88,717,117...88,904,257
JBrowse link
G MIR107 microRNA 107 ISO (MGI:MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:MGI:3817382 NCBI chr10:89,592,747...89,592,827
Ensembl chr10:89,592,747...89,592,827
JBrowse link
G MIR10A microRNA 10a ISO (MGI:MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:MGI:3817382 NCBI chr17:48,579,838...48,579,947
Ensembl chr17:48,579,838...48,579,947
JBrowse link
G MIR125A microRNA 125a ISO (MGI:MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:MGI:3817382 NCBI chr19:51,693,254...51,693,339
Ensembl chr19:51,693,254...51,693,339
JBrowse link
G MIR139 microRNA 139 ISO (MGI:MGI:5050043|PMID:21247879) MGI PMID:21247879 MGI:MGI:5050043 NCBI chr11:72,615,063...72,615,130
Ensembl chr11:72,615,063...72,615,130
JBrowse link
G MIR140 microRNA 140 ISO (MGI:MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:MGI:3817382 NCBI chr16:69,933,081...69,933,180
Ensembl chr16:69,933,081...69,933,180
JBrowse link
G MIR142 microRNA 142 ISO (MGI:MGI:5013506|PMID:21536037) MGI PMID:21536037 MGI:MGI:5013506 NCBI chr17:58,331,232...58,331,318
Ensembl chr17:58,331,232...58,331,318
JBrowse link
G MIR146A microRNA 146a ISO (MGI:MGI:3821815|PMID:18791161), (MGI:MGI:5050043|PMID:21247879) MGI PMID:18791161, PMID:21247879 MGI:MGI:3821815, MGI:MGI:5050043 NCBI chr 5:160,485,352...160,485,450
Ensembl chr 5:160,485,352...160,485,450
JBrowse link
G MIR146B microRNA 146b ISO (MGI:MGI:5050043|PMID:21247879) MGI PMID:21247879 MGI:MGI:5050043 NCBI chr10:102,436,512...102,436,584
Ensembl chr10:102,436,512...102,436,584
JBrowse link
G MIR147B microRNA 147b ISO (MGI:MGI:5050043|PMID:21247879) MGI PMID:21247879 MGI:MGI:5050043 NCBI chr15:45,433,050...45,433,129
Ensembl chr15:45,433,050...45,433,129
JBrowse link
G MIR150 microRNA 150 ISO (MGI:MGI:3817382|PMID:18762567), (MGI:MGI:5050043|PMID:21247879) MGI PMID:18762567, PMID:21247879 MGI:MGI:3817382, MGI:MGI:5050043 NCBI chr19:49,500,785...49,500,868
Ensembl chr19:49,500,785...49,500,868
JBrowse link
G MIR155 microRNA 155 ISO (MGI:MGI:3817382|PMID:18762567), (MGI:MGI:5050043|PMID:21247879) MGI PMID:18762567, PMID:21247879 MGI:MGI:3817382, MGI:MGI:5050043 NCBI chr21:25,573,980...25,574,044
Ensembl chr21:25,573,980...25,574,044
JBrowse link
G MIR15A microRNA 15a ISO (MGI:MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:MGI:3817382 NCBI chr13:50,049,119...50,049,201
Ensembl chr13:50,049,119...50,049,201
JBrowse link
G MIR16-2 microRNA 16-2 ISO (MGI:MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:MGI:3817382 NCBI chr 3:160,404,745...160,404,825
Ensembl chr 3:160,404,745...160,404,825
JBrowse link
G MIR181A1 microRNA 181a-1 ISO (MGI:MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:MGI:3817382 NCBI chr 1:198,859,044...198,859,153
Ensembl chr 1:198,859,044...198,859,153
JBrowse link
G MIR181A2 microRNA 181a-2 ISO (MGI:MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:MGI:3817382 NCBI chr 9:124,692,442...124,692,551
Ensembl chr 9:124,692,442...124,692,551
JBrowse link
G MIR181B2 microRNA 181b-2 ISO (MGI:MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:MGI:3817382 NCBI chr 9:124,693,710...124,693,798
Ensembl chr 9:124,693,710...124,693,798
JBrowse link
G MIR181C microRNA 181c ISO (MGI:MGI:3817382|PMID:18762567), (MGI:MGI:5050043|PMID:21247879) MGI PMID:18762567, PMID:21247879 MGI:MGI:3817382, MGI:MGI:5050043 NCBI chr19:13,874,699...13,874,808
Ensembl chr19:13,874,699...13,874,808
JBrowse link
G MIR182 microRNA 182 ISO (MGI:MGI:5050043|PMID:21247879) MGI PMID:21247879 MGI:MGI:5050043 NCBI chr 7:129,770,383...129,770,492
Ensembl chr 7:129,770,383...129,770,492
JBrowse link
G MIR184 microRNA 184 ISO (MGI:MGI:5050043|PMID:21247879) MGI PMID:21247879 MGI:MGI:5050043 NCBI chr15:79,209,788...79,209,871
Ensembl chr15:79,209,788...79,209,871
JBrowse link
G MIR193A microRNA 193a ISO (MGI:MGI:5050043|PMID:21247879) MGI PMID:21247879 MGI:MGI:5050043 NCBI chr17:31,559,996...31,560,083
Ensembl chr17:31,559,996...31,560,083
JBrowse link
G MIR194-1 microRNA 194-1 ISO (MGI:MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:MGI:3817382 NCBI chr 1:220,118,157...220,118,241
Ensembl chr 1:220,118,157...220,118,241
JBrowse link
G MIR194-2 microRNA 194-2 ISO (MGI:MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:MGI:3817382 NCBI chr11:64,891,355...64,891,439
Ensembl chr11:64,891,355...64,891,439
JBrowse link
G MIR199A1 microRNA 199a-1 ISO (MGI:MGI:5050043|PMID:21247879) MGI PMID:21247879 MGI:MGI:5050043 NCBI chr19:10,817,426...10,817,496
Ensembl chr19:10,817,426...10,817,496
JBrowse link
G MIR199A2 microRNA 199a-2 ISO (MGI:MGI:5050043|PMID:21247879) MGI PMID:21247879 MGI:MGI:5050043 NCBI chr 1:172,144,535...172,144,644
Ensembl chr 1:172,144,535...172,144,644
JBrowse link
G MIR200C microRNA 200c ISO (MGI:MGI:5050043|PMID:21247879) MGI PMID:21247879 MGI:MGI:5050043 NCBI chr12:6,963,699...6,963,766
Ensembl chr12:6,963,699...6,963,766
JBrowse link
G MIR202 microRNA 202 ISO (MGI:MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:MGI:3817382 NCBI chr10:133,247,511...133,247,620
Ensembl chr10:133,247,511...133,247,620
JBrowse link
G MIR205 microRNA 205 ISO (MGI:MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:MGI:3817382 NCBI chr 1:209,432,133...209,432,242
Ensembl chr 1:209,432,133...209,432,242
JBrowse link
G MIR210 microRNA 210 ISO (MGI:MGI:5050043|PMID:21247879) MGI PMID:21247879 MGI:MGI:5050043 NCBI chr11:568,089...568,198
Ensembl chr11:568,089...568,198
JBrowse link
G MIR217 microRNA 217 ISO (MGI:MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:MGI:3817382 NCBI chr 2:55,982,967...55,983,076
Ensembl chr 2:55,982,967...55,983,076
JBrowse link
G MIR223 microRNA 223 ISO (MGI:MGI:3817382|PMID:18762567), (MGI:MGI:3821815|PMID:18791161), (MGI:MGI:5050043|PMID:21247879) MGI
RGD
PMID:18762567, PMID:18791161, PMID:21247879, PMID:29707878 MGI:MGI:3817382, MGI:MGI:3821815, MGI:MGI:5050043, RGD:25823197 NCBI chr  X:66,018,870...66,018,979
Ensembl chr  X:66,018,870...66,018,979
JBrowse link
G MIR224 microRNA 224 ISO (MGI:MGI:3817382|PMID:18762567), (MGI:MGI:5050043|PMID:21247879) MGI PMID:18762567, PMID:21247879 MGI:MGI:3817382, MGI:MGI:5050043 NCBI chr  X:151,958,578...151,958,658
Ensembl chr  X:151,958,578...151,958,658
JBrowse link
G MIR23B microRNA 23b ISO (MGI:MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:MGI:3817382 NCBI chr 9:95,085,208...95,085,304
Ensembl chr 9:95,085,208...95,085,304
JBrowse link
G MIR24-1 microRNA 24-1 ISO (MGI:MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:MGI:3817382 NCBI chr 9:95,086,021...95,086,088
Ensembl chr 9:95,086,021...95,086,088
JBrowse link
G MIR24-2 microRNA 24-2 ISO (MGI:MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:MGI:3817382 NCBI chr19:13,836,287...13,836,359
Ensembl chr19:13,836,287...13,836,359
JBrowse link
G MIR26A1 microRNA 26a-1 ISO (MGI:MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:MGI:3817382 NCBI chr 3:37,969,404...37,969,480
Ensembl chr 3:37,969,404...37,969,480
JBrowse link
G MIR26A2 microRNA 26a-2 ISO (MGI:MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:MGI:3817382 NCBI chr12:57,824,609...57,824,692
Ensembl chr12:57,824,609...57,824,692
JBrowse link
G MIR26B microRNA 26b ISO (MGI:MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:MGI:3817382 NCBI chr 2:218,402,646...218,402,722
Ensembl chr 2:218,402,646...218,402,722
JBrowse link
G MIR27A microRNA 27a ISO (MGI:MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:MGI:3817382 NCBI chr19:13,836,440...13,836,517
Ensembl chr19:13,836,440...13,836,517
JBrowse link
G MIR29A microRNA 29a ISO (MGI:MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:MGI:3817382 NCBI chr 7:130,876,747...130,876,810
Ensembl chr 7:130,876,747...130,876,810
JBrowse link
G MIR29B1 microRNA 29b-1 ISO (MGI:MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:MGI:3817382 NCBI chr 7:130,877,459...130,877,539
Ensembl chr 7:130,877,459...130,877,539
JBrowse link
G MIR29B2 microRNA 29b-2 ISO (MGI:MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:MGI:3817382 NCBI chr 1:207,802,443...207,802,523
Ensembl chr 1:207,802,443...207,802,523
JBrowse link
G MIR30B microRNA 30b ISO (MGI:MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:MGI:3817382 NCBI chr 8:134,800,520...134,800,607
Ensembl chr 8:134,800,520...134,800,607
JBrowse link
G MIR30C1 microRNA 30c-1 ISO (MGI:MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:MGI:3817382 NCBI chr 1:40,757,284...40,757,372
Ensembl chr 1:40,757,284...40,757,372
JBrowse link
G MIR30C2 microRNA 30c-2 ISO (MGI:MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:MGI:3817382 NCBI chr 6:71,376,960...71,377,031
Ensembl chr 6:71,376,960...71,377,031
JBrowse link
G MIR30D microRNA 30d ISO (MGI:MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:MGI:3817382 NCBI chr 8:134,804,876...134,804,945
Ensembl chr 8:134,804,876...134,804,945
JBrowse link
G MIR323A microRNA 323a ISO (MGI:MGI:5050043|PMID:21247879) MGI PMID:21247879 MGI:MGI:5050043 NCBI chr14:101,025,732...101,025,817
Ensembl chr14:101,025,732...101,025,817
JBrowse link
G MIR342 microRNA 342 ISO (MGI:MGI:3817382|PMID:18762567), (MGI:MGI:5050043|PMID:21247879) MGI PMID:18762567, PMID:21247879 MGI:MGI:3817382, MGI:MGI:5050043 NCBI chr14:100,109,655...100,109,753
Ensembl chr14:100,109,655...100,109,753
JBrowse link
G MIR345 microRNA 345 ISO (MGI:MGI:5050043|PMID:21247879) MGI PMID:21247879 MGI:MGI:5050043 NCBI chr14:100,307,859...100,307,956
Ensembl chr14:100,307,859...100,307,956
JBrowse link
G MIR381 microRNA 381 ISO (MGI:MGI:5050043|PMID:21247879) MGI PMID:21247879 MGI:MGI:5050043 NCBI chr14:101,045,920...101,045,994
Ensembl chr14:101,045,920...101,045,994
JBrowse link
G MIR383 microRNA 383 ISO (MGI:MGI:5050043|PMID:21247879) MGI PMID:21247879 MGI:MGI:5050043 NCBI chr 8:14,853,438...14,853,510
Ensembl chr 8:14,853,438...14,853,510
JBrowse link
G MIR409 microRNA 409 ISO (MGI:MGI:5050043|PMID:21247879) MGI PMID:21247879 MGI:MGI:5050043 NCBI chr14:101,065,300...101,065,378
Ensembl chr14:101,065,300...101,065,378
JBrowse link
G MIR425 microRNA 425 ISO (MGI:MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:MGI:3817382 NCBI chr 3:49,020,148...49,020,234
Ensembl chr 3:49,020,148...49,020,234
JBrowse link
G MIR431 microRNA 431 ISO (MGI:MGI:5050043|PMID:21247879) MGI PMID:21247879 MGI:MGI:5050043 NCBI chr14:100,881,007...100,881,120
Ensembl chr14:100,881,007...100,881,120
JBrowse link
G MIR433 microRNA 433 ISO (MGI:MGI:5050043|PMID:21247879) MGI PMID:21247879 MGI:MGI:5050043 NCBI chr14:100,881,886...100,881,978
Ensembl chr14:100,881,886...100,881,978
JBrowse link
G MIR484 microRNA 484 ISO (MGI:MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:MGI:3817382 NCBI chr16:15,643,294...15,643,372
Ensembl chr16:15,643,294...15,643,372
JBrowse link
G MIR486-1 microRNA 486-1 ISO (MGI:MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:MGI:3817382 NCBI chr 8:41,660,441...41,660,508
Ensembl chr 8:41,660,441...41,660,508
JBrowse link
G MIR494 microRNA 494 ISO (MGI:MGI:5050043|PMID:21247879) MGI PMID:21247879 MGI:MGI:5050043 NCBI chr14:101,029,634...101,029,714
Ensembl chr14:101,029,634...101,029,714
JBrowse link
G MIR501 microRNA 501 ISO (MGI:MGI:5050043|PMID:21247879) MGI PMID:21247879 MGI:MGI:5050043 NCBI chr  X:50,009,722...50,009,805
Ensembl chr  X:50,009,722...50,009,805
JBrowse link
G MIR502 microRNA 502 ISO (MGI:MGI:5050043|PMID:21247879) MGI PMID:21247879 MGI:MGI:5050043 NCBI chr  X:50,014,598...50,014,683
Ensembl chr  X:50,014,598...50,014,683
JBrowse link
G MIR511 microRNA 511 ISO (MGI:MGI:5486412|PMID:22832163) MGI PMID:22832163 MGI:MGI:5486412 NCBI chr10:17,845,107...17,845,193
Ensembl chr10:17,845,107...17,845,193
JBrowse link
G MIR598 microRNA 598 ISO (MGI:MGI:5050043|PMID:21247879) MGI PMID:21247879 MGI:MGI:5050043 NCBI chr 8:11,035,206...11,035,302
Ensembl chr 8:11,035,206...11,035,302
JBrowse link
G MIR7-1 microRNA 7-1 ISO (MGI:MGI:5050043|PMID:21247879) MGI PMID:21247879 MGI:MGI:5050043 NCBI chr 9:83,969,748...83,969,857
Ensembl chr 9:83,969,748...83,969,857
JBrowse link
G MIR7-3 microRNA 7-3 ISO (MGI:MGI:5050043|PMID:21247879) MGI PMID:21247879 MGI:MGI:5050043 NCBI chr19:4,770,670...4,770,779
Ensembl chr19:4,770,670...4,770,779
JBrowse link
G MIR98 microRNA 98 ISO (MGI:MGI:5013871|PMID:21609717) MGI PMID:21609717 MGI:MGI:5013871 NCBI chr  X:53,556,223...53,556,341
Ensembl chr  X:53,556,223...53,556,341
JBrowse link
G MIRLET7A2 microRNA let-7a-2 ISO (MGI:MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:MGI:3817382 NCBI chr11:122,146,522...122,146,593
Ensembl chr11:122,146,522...122,146,593
JBrowse link
G MIRLET7G microRNA let-7g ISO (MGI:MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:MGI:3817382 NCBI chr 3:52,268,278...52,268,361
Ensembl chr 3:52,268,278...52,268,361
JBrowse link
G MMP1 matrix metallopeptidase 1 ISO RGD PMID:21683124 RGD:7207286 NCBI chr11:102,789,919...102,798,160
Ensembl chr11:102,789,919...102,798,160
JBrowse link
G MMP9 matrix metallopeptidase 9 ISO RGD PMID:21683124 RGD:7207286 NCBI chr20:46,008,908...46,016,561
Ensembl chr20:46,008,908...46,016,561
JBrowse link
G MRC1 mannose receptor C-type 1 IEA Ensembl GO_REF:0000107 NCBI chr10:17,809,348...17,911,164
Ensembl chr10:17,809,348...17,911,164
JBrowse link
G MYD88 MYD88 innate immune signal transduction adaptor ISS ARUK-UCL GO_REF:0000024 NCBI chr 3:38,138,661...38,143,022
Ensembl chr 3:38,138,478...38,143,022
JBrowse link
G NCL nucleolin ISO RGD PMID:21309751 RGD:9686449 NCBI chr 2:231,453,531...231,464,484
Ensembl chr 2:231,453,531...231,483,641
JBrowse link
G NFKB1 nuclear factor kappa B subunit 1 IMP (PMID:23776175) MGI PMID:23776175 NCBI chr 4:102,501,266...102,617,302
Ensembl chr 4:102,501,331...102,617,302
JBrowse link
G NFKBIB NFKB inhibitor beta IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr19:38,899,503...38,908,894
Ensembl chr19:38,899,700...38,908,893
JBrowse link
G NFKBIL1 NFKB inhibitor like 1 IDA (PMID:20829348) UniProtKB PMID:20829348 NCBI chr 6:31,546,851...31,558,829
Ensembl chr 6:31,546,870...31,558,829
JBrowse link
G NLRP3 NLR family pyrin domain containing 3 IMP
IDA
(PMID:12483741)
(PMID:28847925)
BHF-UCL
UniProt
PMID:12483741, PMID:28847925 NCBI chr 1:247,416,163...247,448,823
Ensembl chr 1:247,416,156...247,449,108
JBrowse link
G NLRP7 NLR family pyrin domain containing 7 IEP (PMID:15817483) UniProtKB PMID:15817483 NCBI chr19:54,923,509...54,965,184
Ensembl chr19:54,923,509...54,966,312
JBrowse link
G NOD2 nucleotide binding oligomerization domain containing 2 IMP (PMID:27812135) UniProtKB PMID:27812135 NCBI chr16:50,693,587...50,733,077
Ensembl chr16:50,693,588...50,734,041
JBrowse link
G NOS2 nitric oxide synthase 2 IEA Ensembl GO_REF:0000107 NCBI chr17:27,756,766...27,800,529
Ensembl chr17:27,756,766...27,800,529
JBrowse link
G NR1D1 nuclear receptor subfamily 1 group D member 1 IMP (PMID:18511497) BHF-UCL PMID:18511497 NCBI chr17:40,092,793...40,100,589
Ensembl chr17:40,092,793...40,100,589
JBrowse link
G NR1H3 nuclear receptor subfamily 1 group H member 3 IDA
IEA
(PMID:18511497) BHF-UCL
Ensembl
PMID:18511497 GO_REF:0000107 NCBI chr11:47,248,300...47,269,033
Ensembl chr11:47,248,300...47,269,033
JBrowse link
G NR1H4 nuclear receptor subfamily 1 group H member 4 IEA Ensembl GO_REF:0000107 NCBI chr12:100,473,866...100,564,414
Ensembl chr12:100,473,708...100,564,414
JBrowse link
G NUGGC nuclear GTPase, germinal center associated IDA (PMID:19734146) UniProtKB PMID:19734146 NCBI chr 8:28,021,964...28,084,068
Ensembl chr 8:28,021,964...28,083,936
JBrowse link
G OGT O-linked N-acetylglucosamine (GlcNAc) transferase ISO RGD PMID:19098112 RGD:9590190 NCBI chr  X:71,533,104...71,575,892
Ensembl chr  X:71,533,104...71,575,892
JBrowse link
G OPRK1 opioid receptor kappa 1 IEA Ensembl GO_REF:0000107 NCBI chr 8:53,225,724...53,251,637
Ensembl chr 8:53,225,724...53,251,637
Ensembl chr 8:53,225,724...53,251,637
JBrowse link
G P2RY2 purinergic receptor P2Y2 ISO RGD PMID:18689605 RGD:2316659 NCBI chr11:73,200,416...73,246,743
Ensembl chr11:73,218,281...73,242,427
Ensembl chr11:73,218,281...73,242,427
JBrowse link
G PABPN1 poly(A) binding protein nuclear 1 ISS UniProtKB GO_REF:0000024 NCBI chr14:23,320,188...23,326,185
Ensembl chr14:23,321,289...23,326,185
JBrowse link
G PAF1 PAF1 homolog, Paf1/RNA polymerase II complex component ISS UniProtKB GO_REF:0000024 NCBI chr19:39,385,629...39,391,106
Ensembl chr19:39,385,629...39,391,154
JBrowse link
G PARK7 Parkinsonism associated deglycase ISO RGD PMID:23847046 RGD:13462068 NCBI chr 1:7,961,711...7,985,505
Ensembl chr 1:7,954,291...7,985,505
JBrowse link
G PDCD1LG2 programmed cell death 1 ligand 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:5,510,438...5,571,282
Ensembl chr 9:5,510,531...5,571,282
JBrowse link
G PDCD4 programmed cell death 4 ISS BHF-UCL GO_REF:0000024 NCBI chr10:110,871,928...110,900,006
Ensembl chr10:110,871,795...110,900,006
JBrowse link
G PDE2A phosphodiesterase 2A ISO (PMID:21571906) UniProtKB PMID:21571906 NCBI chr11:72,576,141...72,674,422
Ensembl chr11:72,576,141...72,674,591
JBrowse link
G PDE4B phosphodiesterase 4B ISS BHF-UCL GO_REF:0000024 NCBI chr 1:65,792,510...66,374,579
Ensembl chr 1:65,792,514...66,374,579
JBrowse link
G PDE4D phosphodiesterase 4D IEA Ensembl GO_REF:0000107 NCBI chr 5:58,969,038...60,524,329
Ensembl chr 5:58,969,038...60,522,120
JBrowse link
G PF4 platelet factor 4 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:73,980,811...73,982,124
Ensembl chr 4:73,980,811...73,982,027
JBrowse link
G PF4V1 platelet factor 4 variant 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:73,853,296...73,854,483
Ensembl chr 4:73,853,296...73,854,483
JBrowse link
G PLAA phospholipase A2 activating protein IMP (PMID:28007986) UniProtKB PMID:28007986 NCBI chr 9:26,903,372...26,947,267
Ensembl chr 9:26,903,372...26,947,242
JBrowse link
G PLAU plasminogen activator, urokinase ISO RGD PMID:19184369 RGD:7241806 NCBI chr10:73,909,182...73,917,497
Ensembl chr10:73,909,177...73,917,496
JBrowse link
G PLSCR1 phospholipid scramblase 1 ISO (PMID:17590392) UniProtKB PMID:17590392 NCBI chr 3:146,515,178...146,544,805
Ensembl chr 3:146,515,180...146,544,856
JBrowse link
G PLSCR2 phospholipid scramblase 2 ISO (PMID:17590392) UniProtKB PMID:17590392 NCBI chr 3:146,391,363...146,497,163
Ensembl chr 3:146,391,421...146,495,991
JBrowse link
G PLSCR3 phospholipid scramblase 3 IEA Ensembl GO_REF:0000107 NCBI chr17:7,389,727...7,394,525
Ensembl chr17:7,389,727...7,394,842
JBrowse link
G PLSCR4 phospholipid scramblase 4 IEA Ensembl GO_REF:0000107 NCBI chr 3:146,192,335...146,251,125
Ensembl chr 3:146,192,335...146,251,179
JBrowse link
G PPARD peroxisome proliferator activated receptor delta IEA Ensembl GO_REF:0000107 NCBI chr 6:35,342,558...35,428,180
Ensembl chr 6:35,342,558...35,428,191
JBrowse link
G PPARGC1A PPARG coactivator 1 alpha IEA Ensembl GO_REF:0000107 NCBI chr 4:23,792,021...24,472,905
Ensembl chr 4:23,755,041...23,904,089
JBrowse link
G PPBP pro-platelet basic protein IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:73,986,439...73,988,190
Ensembl chr 4:73,986,439...73,988,190
JBrowse link
G PRPF8 pre-mRNA processing factor 8 IEA Ensembl GO_REF:0000107 NCBI chr17:1,650,629...1,684,880
Ensembl chr17:1,650,629...1,684,867
JBrowse link
G PTGER3 prostaglandin E receptor 3 ISO RGD PMID:14636300 RGD:10043359 NCBI chr 1:70,852,358...71,047,816
Ensembl chr 1:70,852,353...71,047,808
JBrowse link
G PYCARD PYD and CARD domain containing IDA (PMID:12486103) UniProtKB PMID:12486103 NCBI chr16:31,201,486...31,202,760
Ensembl chr16:31,201,486...31,203,450
JBrowse link
G RARA retinoic acid receptor alpha IEA Ensembl GO_REF:0000107 NCBI chr17:40,309,180...40,357,643
Ensembl chr17:40,309,180...40,357,643
JBrowse link
G RELA RELA proto-oncogene, NF-kB subunit IMP (PMID:25762865) ARUK-UCL PMID:25762865 NCBI chr11:65,653,601...65,662,946
Ensembl chr11:65,653,597...65,663,090
JBrowse link
G RHOA ras homolog family member A IDA (PMID:19734146) UniProtKB PMID:19734146 NCBI chr 3:49,359,145...49,411,976
Ensembl chr 3:49,359,145...49,412,998
JBrowse link
G RIPK2 receptor interacting serine/threonine kinase 2 ISO (MGI:MGI:2176422|PMID:11894098)
(MGI:MGI:2176424|PMID:11894097)
MGI PMID:11894097, PMID:11894098 MGI:MGI:2176422, MGI:MGI:2176424 NCBI chr 8:89,757,816...89,791,064
Ensembl chr 8:89,757,806...89,791,064
JBrowse link
G SBNO2 strawberry notch homolog 2 ISS UniProtKB GO_REF:0000024 NCBI chr19:1,107,637...1,174,268
Ensembl chr19:1,107,637...1,174,268
JBrowse link
G SELENOS selenoprotein S IMP (PMID:18675776) BHF-UCL PMID:18675776 NCBI chr15:101,270,809...101,277,485
Ensembl chr15:101,270,817...101,277,500
JBrowse link
G SERPINE1 serpin family E member 1 IMP (PMID:19916862) BHF-UCL PMID:19916862 NCBI chr 7:101,127,104...101,139,247
Ensembl chr 7:101,127,104...101,139,247
Ensembl chr 7:101,127,104...101,139,247
JBrowse link
G SGMS1 sphingomyelin synthase 1 IEA Ensembl GO_REF:0000107 NCBI chr10:50,305,600...50,623,956
Ensembl chr10:50,305,586...50,625,163
JBrowse link
G SHPK sedoheptulokinase IDA
IBA
(PMID:22682222)
(PMID:21873635)
UniProtKB
GO_Central
PMID:21873635, PMID:22682222 NCBI chr17:3,608,240...3,636,250
Ensembl chr17:3,608,240...3,636,250
Ensembl chr17:3,608,240...3,636,250
Ensembl chr17:3,608,240...3,636,250
JBrowse link
G SIRPA signal regulatory protein alpha ISS ARUK-UCL GO_REF:0000024 NCBI chr20:1,894,167...1,940,592
Ensembl chr20:1,894,167...1,940,592
JBrowse link
G SMR3B submaxillary gland androgen regulated protein 3B ISO PMID:9321881 UniProt PMID:9321881 RGD:8553737 NCBI chr 4:70,383,131...70,390,244
Ensembl chr 4:70,370,093...70,390,244
JBrowse link
G SPON2 spondin 2 IEA Ensembl GO_REF:0000107 NCBI chr 4:1,166,932...1,208,844
Ensembl chr 4:1,166,932...1,208,962
JBrowse link
G SRC SRC proto-oncogene, non-receptor tyrosine kinase IEA Ensembl GO_REF:0000107 NCBI chr20:37,344,690...37,406,050
Ensembl chr20:37,344,685...37,406,050
JBrowse link
G STAP1 signal transducing adaptor family member 1 ISS BHF-UCL GO_REF:0000024 NCBI chr 4:67,558,727...67,607,337
Ensembl chr 4:67,558,727...67,607,337
JBrowse link
G STAR steroidogenic acute regulatory protein IEA Ensembl GO_REF:0000107 NCBI chr 8:38,142,700...38,150,952
Ensembl chr 8:38,142,700...38,150,992
JBrowse link
G STAT1 signal transducer and activator of transcription 1 ISO (MGI:MGI:5013875|PMID:21606371) MGI PMID:21606371 MGI:MGI:5013875 NCBI chr 2:190,968,989...191,014,197
Ensembl chr 2:190,908,460...191,020,960
Ensembl chr 2:190,908,460...191,020,960
JBrowse link
G TBXA2R thromboxane A2 receptor IEA Ensembl GO_REF:0000107 NCBI chr19:3,594,507...3,608,749
Ensembl chr19:3,594,507...3,606,875
Ensembl chr19:3,594,507...3,606,875
JBrowse link
G TFPI tissue factor pathway inhibitor IEA Ensembl GO_REF:0000107 NCBI chr 2:187,464,230...187,554,501
Ensembl chr 2:187,464,230...187,565,760
JBrowse link
G THPO thrombopoietin ISO RGD PMID:20236022 RGD:11073693 NCBI chr 3:184,371,935...184,379,688
Ensembl chr 3:184,371,935...184,381,968
JBrowse link
G TICAM1 toll like receptor adaptor molecule 1 ISS ParkinsonsUK-UCL GO_REF:0000024 NCBI chr19:4,815,932...4,831,712
Ensembl chr19:4,815,932...4,831,712
Ensembl chr19:4,815,932...4,831,712
JBrowse link
G TICAM2 toll like receptor adaptor molecule 2 IMP
IDA
(PMID:22685567)
(PMID:19412184)
UniProtKB PMID:19412184, PMID:22685567 NCBI chr 5:115,578,496...115,602,479
Ensembl chr 5:115,578,650...115,602,479
Ensembl chr 5:115,578,650...115,602,479
JBrowse link
G TLR4 toll like receptor 4 IDA
IGI
ISS
(PMID:11432859)
(PMID:30321456)
UniProtKB
ARUK-UCL
BHF-UCL
PMID:11432859, PMID:30321456 GO_REF:0000024 NCBI chr 9:117,704,403...117,724,735
Ensembl chr 9:117,704,175...117,724,735
JBrowse link
G TLR5 toll like receptor 5 IEA Ensembl GO_REF:0000107 NCBI chr 1:223,108,401...223,143,281
Ensembl chr 1:223,109,404...223,143,248
JBrowse link
G TLR9 toll like receptor 9 ISO RGD PMID:20655116, PMID:21308757 RGD:5129495, RGD:5130179 NCBI chr 3:52,221,080...52,225,645
Ensembl chr 3:52,221,080...52,226,163
JBrowse link
G TMED7-TICAM2 TMED7-TICAM2 readthrough IMP
IDA
(PMID:22685567)
(PMID:19412184)
UniProtKB PMID:19412184, PMID:22685567 NCBI chr 5:115,578,496...115,626,036
Ensembl chr 5:115,578,642...115,626,161
JBrowse link
G TNF tumor necrosis factor ISO (MGI:MGI:3828894|PMID:19047410), (MGI:MGI:4437182|PMID:20060382), (MGI:MGI:5013875|PMID:21606371), (MGI:MGI:5543352|PMID:23610142) MGI
RGD
PMID:10959811, PMID:15602748, PMID:17964727, PMID:19047410, PMID:20060382, PMID:21606371, PMID:23610142 MGI:MGI:3828894, MGI:MGI:4437182, MGI:MGI:5013875, MGI:MGI:5543352, RGD:14994703, RGD:14995441, RGD:1582142 NCBI chr 6:31,575,565...31,578,336
Ensembl chr 6:31,575,565...31,578,336
JBrowse link
G TNFAIP3 TNF alpha induced protein 3 IDA (PMID:19912257), (PMID:21127049), (PMID:21220427) BHF-UCL PMID:19912257, PMID:21127049, PMID:21220427 NCBI chr 6:137,866,317...137,883,312
Ensembl chr 6:137,867,214...137,883,312
JBrowse link
G TNFRSF1B TNF receptor superfamily member 1B IMP (PMID:22480688) BHF-UCL PMID:22480688 NCBI chr 1:12,166,948...12,209,222
Ensembl chr 1:12,166,991...12,209,228
JBrowse link
G TNFSF4 TNF superfamily member 4 IDA (PMID:20844189) BHF-UCL PMID:20844189 NCBI chr 1:173,183,729...173,462,208
Ensembl chr 1:173,183,731...173,207,331
JBrowse link
G TNIP2 TNFAIP3 interacting protein 2 ISS UniProtKB GO_REF:0000024 NCBI chr 4:2,741,648...2,756,336
Ensembl chr 4:2,741,648...2,756,342
JBrowse link
G TNIP3 TNFAIP3 interacting protein 3 IEA
IDA
(PMID:17088249) InterPro
UniProtKB
PMID:17088249 GO_REF:0000002 NCBI chr 4:121,131,408...121,227,609
Ensembl chr 4:121,131,408...121,227,466
JBrowse link
G TRAF6 TNF receptor associated factor 6 IDA (PMID:23776175) MGI PMID:23776175 NCBI chr11:36,483,769...36,510,313
Ensembl chr11:36,483,769...36,510,272
JBrowse link
G TRIM41 tripartite motif containing 41 IMP (PMID:27812135) UniProtKB PMID:27812135 NCBI chr 5:181,223,265...181,235,808
Ensembl chr 5:181,222,499...181,235,808
JBrowse link
G TSPO translocator protein IEA Ensembl GO_REF:0000107 NCBI chr22:43,151,559...43,163,242
Ensembl chr22:43,151,547...43,163,242
JBrowse link
G UPF1 UPF1 RNA helicase and ATPase IDA (PMID:26255671) UniProtKB PMID:26255671 NCBI chr19:18,831,405...18,868,230
Ensembl chr19:18,831,938...18,868,236
Ensembl chr19:18,831,938...18,868,236
JBrowse link
G VIM vimentin IMP (PMID:27812135) UniProtKB PMID:27812135 NCBI chr10:17,228,241...17,237,593
Ensembl chr10:17,228,241...17,237,593
JBrowse link
G VLDLR very low density lipoprotein receptor ISO RGD PMID:16376325 RGD:1625574 NCBI chr 9:2,621,786...2,660,056
Ensembl chr 9:2,621,787...2,660,056
JBrowse link
G VWF von Willebrand factor ISO RGD PMID:17708840 RGD:11079229 NCBI chr12:5,948,877...6,124,670
Ensembl chr12:5,948,877...6,124,770
Ensembl chr12:5,948,877...6,124,770
JBrowse link
G WNT5A Wnt family member 5A IEP (PMID:18174455) UniProtKB PMID:18174455 NCBI chr 3:55,465,715...55,505,261
Ensembl chr 3:55,465,715...55,490,539
JBrowse link
G XBP1 X-box binding protein 1 IDA (PMID:11460154) UniProtKB PMID:11460154 NCBI chr22:28,794,560...28,800,569
Ensembl chr22:28,794,555...28,800,597
JBrowse link
G ZC3H12A zinc finger CCCH-type containing 12A IMP
IDA
(PMID:25861989)
(PMID:18178554), (PMID:19909337), (PMID:22055188)
UniProtKB
BHF-UCL
PMID:18178554, PMID:19909337, PMID:22055188, PMID:25861989 NCBI chr 1:37,474,518...37,484,377
Ensembl chr 1:37,474,580...37,484,377
JBrowse link
G ZFP36 ZFP36 ring finger protein IDA
IEA
IMP
(PMID:14766228)
(PMID:14679154), (PMID:15187101)
UniProtKB
Ensembl
PMID:14679154, PMID:14766228, PMID:15187101 GO_REF:0000107 NCBI chr19:39,406,847...39,409,407
Ensembl chr19:39,406,847...39,409,412
JBrowse link
G ZNF443 zinc finger protein 443 ISO PMID:17374454 UniProt PMID:17374454 RGD:8553966 NCBI chr19:12,429,706...12,441,021
Ensembl chr19:12,429,706...12,441,021
JBrowse link
lipopolysaccharide-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKT1 AKT serine/threonine kinase 1 IEA Ensembl GO_REF:0000107 NCBI chr14:104,769,349...104,795,748
Ensembl chr14:104,769,349...104,795,751
JBrowse link
G BCL10 BCL10 immune signaling adaptor IDA (PMID:16831874) UniProt PMID:16831874 NCBI chr 1:85,265,776...85,276,632
Ensembl chr 1:85,265,776...85,276,632
JBrowse link
G BPI bactericidal permeability increasing protein IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr20:38,304,156...38,337,505
Ensembl chr20:38,304,150...38,337,505
Ensembl chr20:38,304,150...38,337,505
JBrowse link
G CCL2 C-C motif chemokine ligand 2 IDA (PMID:21147091) UniProtKB PMID:21147091 NCBI chr17:34,255,285...34,257,203
Ensembl chr17:34,255,218...34,257,203
JBrowse link
G CCL3 C-C motif chemokine ligand 3 IDA (PMID:21147091) UniProtKB PMID:21147091 NCBI chr17:36,088,256...36,090,143
Ensembl chr17:36,088,256...36,090,169
JBrowse link
G CCL5 C-C motif chemokine ligand 5 IDA (PMID:21147091) UniProtKB PMID:21147091 NCBI chr17:35,871,491...35,880,360
Ensembl chr17:35,871,491...35,880,793
JBrowse link
G CD14 CD14 molecule IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:140,631,732...140,633,701
Ensembl chr 5:140,631,728...140,633,701
JBrowse link
G CD6 CD6 molecule IDA (PMID:17601777) UniProtKB PMID:17601777 NCBI chr11:60,971,678...61,020,377
Ensembl chr11:60,971,680...61,020,377
JBrowse link
G HCK HCK proto-oncogene, Src family tyrosine kinase TAS (PMID:18538446) UniProtKB PMID:18538446 NCBI chr20:32,052,242...32,101,856
Ensembl chr20:32,052,197...32,101,856
Ensembl chr20:32,052,197...32,101,856
JBrowse link
G IL18 interleukin 18 IDA (PMID:21147091) UniProtKB PMID:21147091 NCBI chr11:112,143,251...112,164,104
Ensembl chr11:112,143,253...112,164,096
JBrowse link
G IL1B interleukin 1 beta IDA (PMID:21147091) UniProtKB PMID:21147091 NCBI chr 2:112,829,751...112,836,843
Ensembl chr 2:112,829,751...112,836,816
JBrowse link
G IRAK1 interleukin 1 receptor associated kinase 1 IMP (PMID:10383454) BHF-UCL PMID:10383454 NCBI chr  X:154,010,507...154,019,984
Ensembl chr  X:154,010,506...154,019,902
JBrowse link
G IRAK2 interleukin 1 receptor associated kinase 2 IEA Ensembl GO_REF:0000107 NCBI chr 3:10,164,919...10,243,745
Ensembl chr 3:10,164,919...10,243,745
JBrowse link
G IRF3 interferon regulatory factor 3 IEA Ensembl GO_REF:0000107 NCBI chr19:49,659,572...49,665,857
Ensembl chr19:49,659,569...49,665,875
JBrowse link
G LBP lipopolysaccharide binding protein IDA
IBA
(PMID:11739189), (PMID:8409400)
(PMID:21873635)
BHF-UCL
GO_Central
PMID:8409400, PMID:11739189, PMID:21873635 NCBI chr20:38,346,482...38,377,013
Ensembl chr20:38,346,482...38,377,013
JBrowse link
G LY96 lymphocyte antigen 96 IEA Ensembl GO_REF:0000107 NCBI chr 8:73,991,275...74,099,807
Ensembl chr 8:73,991,392...74,029,079
JBrowse link
G LYN LYN proto-oncogene, Src family tyrosine kinase ISS UniProtKB GO_REF:0000024 NCBI chr 8:55,876,041...56,014,169
Ensembl chr 8:55,879,835...56,014,169
JBrowse link
G MALT1 MALT1 paracaspase IEA Ensembl GO_REF:0000107 NCBI chr18:58,671,420...58,754,477
Ensembl chr18:58,671,465...58,754,477
JBrowse link
G MAPK1 mitogen-activated protein kinase 1 IEA Ensembl GO_REF:0000107 NCBI chr22:21,759,657...21,867,680
Ensembl chr22:21,754,500...21,867,680
Ensembl chr22:21,754,500...21,867,680
JBrowse link
G MAPK14 mitogen-activated protein kinase 14 IEA Ensembl GO_REF:0000107 NCBI chr 6:36,027,711...36,122,964
Ensembl chr 6:36,027,677...36,111,236
JBrowse link
G MAPK3 mitogen-activated protein kinase 3 IEA Ensembl GO_REF:0000107 NCBI chr16:30,114,105...30,123,309
Ensembl chr16:30,114,105...30,123,506
JBrowse link
G MTDH metadherin IMP (PMID:19740331) UniProtKB PMID:19740331 NCBI chr 8:97,643,972...97,730,260
Ensembl chr 8:97,644,184...97,730,260
JBrowse link
G MYD88 MYD88 innate immune signal transduction adaptor IEA Ensembl GO_REF:0000107 NCBI chr 3:38,138,661...38,143,022
Ensembl chr 3:38,138,478...38,143,022
JBrowse link
G NFKBIA NFKB inhibitor alpha IEA Ensembl GO_REF:0000107 NCBI chr14:35,401,513...35,404,749
Ensembl chr14:35,401,511...35,404,749
Ensembl chr14:35,401,511...35,404,749
JBrowse link
G NOS3 nitric oxide synthase 3 IEA Ensembl GO_REF:0000107 NCBI chr 7:150,991,017...151,014,588
Ensembl chr 7:150,991,017...151,014,588
JBrowse link
G PRKCE protein kinase C epsilon ISS UniProtKB GO_REF:0000024 NCBI chr 2:45,651,315...46,187,990
Ensembl chr 2:45,651,345...46,187,990
JBrowse link
G PTAFR platelet activating factor receptor IEA GOC GO_REF:0000108 NCBI chr 1:28,147,166...28,193,856
Ensembl chr 1:28,147,166...28,193,936
JBrowse link
G PTPN22 protein tyrosine phosphatase non-receptor type 22 IMP (PMID:23991106) UniProtKB PMID:23991106 NCBI chr 1:113,813,811...113,871,761
Ensembl chr 1:113,813,811...113,871,753
JBrowse link
G RIPK2 receptor interacting serine/threonine kinase 2 IEA Ensembl GO_REF:0000107 NCBI chr 8:89,757,816...89,791,064
Ensembl chr 8:89,757,806...89,791,064
JBrowse link
G SCARB1 scavenger receptor class B member 1 IEA GOC GO_REF:0000108 NCBI chr12:124,776,856...124,863,864
Ensembl chr12:124,776,856...124,882,668
JBrowse link
G STAT1 signal transducer and activator of transcription 1 ISO (MGI:MGI:2670551|PMID:12872135) MGI PMID:12872135 MGI:MGI:2670551 NCBI chr 2:190,968,989...191,014,197
Ensembl chr 2:190,908,460...191,020,960
Ensembl chr 2:190,908,460...191,020,960
JBrowse link
G TGFB1 transforming growth factor beta 1 IDA (PMID:21147091) UniProtKB PMID:21147091 NCBI chr19:41,330,323...41,353,922
Ensembl chr19:41,301,587...41,353,922
JBrowse link
G TICAM1 toll like receptor adaptor molecule 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr19:4,815,932...4,831,712
Ensembl chr19:4,815,932...4,831,712
Ensembl chr19:4,815,932...4,831,712
JBrowse link
G TLR2 toll like receptor 2 IEA GOC GO_REF:0000108 NCBI chr 4:153,684,080...153,710,643
Ensembl chr 4:153,684,070...153,706,260
Ensembl chr 4:153,684,070...153,706,260
JBrowse link
G TLR4 toll like receptor 4 NOT IGI
IDA
(PMID:10880523) MGI PMID:10880523 NCBI chr 9:117,704,403...117,724,735
Ensembl chr 9:117,704,175...117,724,735
JBrowse link
G TNF tumor necrosis factor IDA (PMID:21147091) UniProtKB PMID:21147091 NCBI chr 6:31,575,565...31,578,336
Ensembl chr 6:31,575,565...31,578,336
JBrowse link
negative regulation of lipopolysaccharide-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CACTIN cactin, spliceosome C complex subunit IMP (PMID:20829348) UniProtKB PMID:20829348 NCBI chr19:3,610,645...3,626,810
Ensembl chr19:3,610,645...3,626,815
JBrowse link
G CARD16 caspase recruitment domain family member 16 IDA (PMID:11432859) UniProtKB PMID:11432859 NCBI chr11:105,040,218...105,045,416
Ensembl chr11:105,041,326...105,101,431
JBrowse link
G CARD8 caspase recruitment domain family member 8 IDA (PMID:11821383) UniProtKB PMID:11821383 NCBI chr19:48,203,148...48,256,264
Ensembl chr19:48,180,770...48,255,946
JBrowse link
G DEFB114 defensin beta 114 IDA (PMID:23482568) UniProtKB PMID:23482568 NCBI chr 6:49,960,249...49,964,164
Ensembl chr 6:49,960,249...49,964,164
JBrowse link
G LACRT lacritin IDA (PMID:26670139) FlyBase PMID:26670139 NCBI chr12:54,630,811...54,634,895
Ensembl chr12:54,630,811...54,634,895
JBrowse link
G LILRA2 leukocyte immunoglobulin like receptor A2 IMP (PMID:22479404) UniProtKB PMID:22479404 NCBI chr19:54,572,988...54,590,287
Ensembl chr19:54,572,920...54,590,287
JBrowse link
G LTF lactotransferrin IDA (PMID:20345905) UniProtKB PMID:20345905 NCBI chr 3:46,435,645...46,485,234
Ensembl chr 3:46,435,645...46,485,234
JBrowse link
G NFKBIL1 NFKB inhibitor like 1 IDA (PMID:20829348) UniProtKB PMID:20829348 NCBI chr 6:31,546,851...31,558,829
Ensembl chr 6:31,546,870...31,558,829
JBrowse link
G PRDM1 PR/SET domain 1 ISO (MGI:MGI:3826899|PMID:18845144) MGI PMID:18845144 MGI:MGI:3826899 NCBI chr 6:106,046,729...106,109,938
Ensembl chr 6:105,993,463...106,109,939
JBrowse link
G PRDX2 peroxiredoxin 2 IEA Ensembl GO_REF:0000107 NCBI chr19:12,796,823...12,801,800
Ensembl chr19:12,796,820...12,801,800
JBrowse link
G SIGIRR single Ig and TIR domain containing TAS (PMID:15866876) HGNC PMID:15866876 NCBI chr11:405,716...417,454
Ensembl chr11:405,716...417,455
JBrowse link
G TRIB1 tribbles pseudokinase 1 IMP (PMID:17452330) BHF-UCL PMID:17452330 NCBI chr 8:125,430,290...125,438,403
Ensembl chr 8:125,430,358...125,438,403
JBrowse link
positive regulation of lipopolysaccharide-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP6 bone morphogenetic protein 6 ISS BHF-UCL GO_REF:0000024 NCBI chr 6:7,726,099...7,881,728
Ensembl chr 6:7,726,099...7,881,728
JBrowse link
G CD180 CD180 molecule IGI
IBA
(PMID:10880523)
(PMID:21873635)
MGI
GO_Central
PMID:10880523, PMID:21873635 NCBI chr 5:67,179,613...67,196,799
Ensembl chr 5:67,179,613...67,196,799
JBrowse link
G LY86 lymphocyte antigen 86 IGI (PMID:10880523) MGI PMID:10880523 NCBI chr 6:6,588,639...6,654,982
Ensembl chr 6:6,588,108...6,654,983
JBrowse link
G LY96 lymphocyte antigen 96 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 8:73,991,275...74,099,807
Ensembl chr 8:73,991,392...74,029,079
JBrowse link
G MIF macrophage migration inhibitory factor IEA Ensembl GO_REF:0000107 NCBI chr22:23,894,383...23,895,223
Ensembl chr22:23,894,383...23,895,227
JBrowse link
G PRKCA protein kinase C alpha IMP (PMID:9830023) UniProtKB PMID:9830023 NCBI chr17:66,302,613...66,810,743
Ensembl chr17:66,302,613...66,810,743
JBrowse link
G SASH1 SAM and SH3 domain containing 1 IMP (PMID:23776175) MGI PMID:23776175 NCBI chr 6:148,193,440...148,552,049
Ensembl chr 6:148,272,304...148,552,048
JBrowse link
G SCIMP SLP adaptor and CSK interacting membrane protein ISS UniProt GO_REF:0000024 NCBI chr17:5,208,920...5,234,860
Ensembl chr17:5,208,920...5,234,860
JBrowse link
G TRAF6 TNF receptor associated factor 6 IEA Ensembl GO_REF:0000107 NCBI chr11:36,483,769...36,510,313
Ensembl chr11:36,483,769...36,510,272
JBrowse link
regulation of lipopolysaccharide-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD36 CD36 molecule TAS (PMID:29111364) ARUK-UCL PMID:29111364 NCBI chr 7:80,602,207...80,679,277
Ensembl chr 7:80,369,575...80,679,277
JBrowse link
G CD55 CD55 molecule (Cromer blood group) IDA (PMID:12731067) UniProtKB PMID:12731067 NCBI chr 1:207,321,674...207,360,966
Ensembl chr 1:207,321,376...207,386,804
Ensembl chr 1:207,321,376...207,386,804
JBrowse link
G CD84 CD84 molecule ISO (MGI:MGI:5700297|PMID:20628063) UniProtKB PMID:20628063 MGI:MGI:5700297 NCBI chr 1:160,541,098...160,579,515
Ensembl chr 1:160,541,095...160,579,516
JBrowse link
G CX3CL1 C-X3-C motif chemokine ligand 1 IDA (PMID:10652441) ARUK-UCL PMID:10652441 NCBI chr16:57,372,490...57,385,044
Ensembl chr16:57,372,477...57,385,044
JBrowse link
G TRIM5 tripartite motif containing 5 IMP (PMID:21512573) UniProtKB PMID:21512573 NCBI chr11:5,590,906...5,685,108
Ensembl chr11:5,663,195...5,938,619
JBrowse link
G TUT4 terminal uridylyl transferase 4 IEA Ensembl GO_REF:0000107 NCBI chr 1:52,423,275...52,553,463
Ensembl chr 1:52,408,282...52,553,487
JBrowse link
tolerance induction to lipopolysaccharide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACOD1 aconitate decarboxylase 1 IDA (PMID:23609450) UniProtKB PMID:23609450 NCBI chr13:76,948,511...76,958,638
Ensembl chr13:76,948,511...76,958,638
JBrowse link
G TNFAIP3 TNF alpha induced protein 3 IMP (PMID:21220427) BHF-UCL PMID:21220427 NCBI chr 6:137,866,317...137,883,312
Ensembl chr 6:137,867,214...137,883,312
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18650
    cellular process 17668
      cellular response to stimulus 8399
        cellular response to biotic stimulus 366
          cellular response to molecule of bacterial origin 337
            cellular response to lipopolysaccharide 327
              lipopolysaccharide-mediated signaling pathway + 64
              tolerance induction to lipopolysaccharide 2
Path 2
Term Annotations click to browse term
  biological_process 18650
    response to stimulus 10129
      response to external stimulus 3486
        response to external biotic stimulus 1911
          response to other organism 1908
            response to bacterium 1055
              response to molecule of bacterial origin 551
                cellular response to molecule of bacterial origin 337
                  cellular response to lipopolysaccharide 327
                    lipopolysaccharide-mediated signaling pathway + 64
                    tolerance induction to lipopolysaccharide 2
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.