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ONTOLOGY REPORT - ANNOTATIONS


Term:cellular response to lipopolysaccharide
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Accession:GO:0071222 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria.
Synonyms:exact_synonym: cellular response to LPS
 broad_synonym: cellular response to endotoxin


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cellular response to lipopolysaccharide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 ISO (MGI:MGI:4411947|PMID:19752193) RGD PMID:19752193 MGI:MGI:4411947 NCBI chr 5:69,857,717...69,983,042
Ensembl chr 5:69,857,771...69,983,015
JBrowse link
G Abcc2 ATP binding cassette subfamily C member 2 IEP RGD PMID:20702406 RGD:11081005 NCBI chr 1:263,554,426...263,612,556
Ensembl chr 1:263,554,453...263,613,252
JBrowse link
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase ISO MGI:MGI:1856663 (MGI:MGI:82358|PMID:8806812) RGD PMID:8806812 MGI:MGI:82358 NCBI chr 3:10,041,820...10,145,076
Ensembl chr 3:10,041,826...10,144,388
JBrowse link
G Acod1 aconitate decarboxylase 1 ISO (PMID:23609450), (PMID:23610393)
(MGI:MGI:5490395|PMID:23610393), (MGI:MGI:5490396|PMID:23609450)
RGD PMID:23609450, PMID:23610393 MGI:MGI:5490395, MGI:MGI:5490396 NCBI chr15:93,612,968...93,622,322
Ensembl chr15:93,612,971...93,622,358
JBrowse link
G Adam9 ADAM metallopeptidase domain 9 ISO (PMID:22480688) RGD PMID:22480688 NCBI chr16:71,810,377...71,887,926
Ensembl chr16:71,810,377...71,887,926
JBrowse link
G Adamts13 ADAM metallopeptidase with thrombospondin type 1 motif, 13 IEP RGD PMID:22871409 RGD:7207038 NCBI chr 3:5,519,921...5,558,390
Ensembl chr 3:5,519,990...5,558,166
JBrowse link
G Aicda activation-induced cytidine deaminase ISO (MGI:MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:MGI:3817382 NCBI chr 4:155,359,909...155,371,104
Ensembl chr 4:155,359,921...155,369,671
JBrowse link
G Akap8 A-kinase anchoring protein 8 ISO (MGI:MGI:5763364|PMID:19531803) RGD PMID:19531803 MGI:MGI:5763364 NCBI chr 7:14,323,298...14,339,953
Ensembl chr 7:14,324,104...14,351,918
JBrowse link
G Ankrd1 ankyrin repeat domain 1 ISO (PMID:7730328)
(MGI:MGI:5294542|PMID:17239933)
RGD PMID:7730328, PMID:17239933 MGI:MGI:5294542 NCBI chr 1:254,726,985...254,745,673
Ensembl chr 1:254,726,969...254,735,548
JBrowse link
G Arg1 arginase 1 IEP RGD PMID:9013624 RGD:4144055 NCBI chr 1:21,525,421...21,537,872
Ensembl chr 1:21,525,421...21,537,863
JBrowse link
G Arg2 arginase 2 IEP RGD PMID:11250887 RGD:4144048 NCBI chr 6:102,311,097...102,338,406
Ensembl chr 6:102,311,116...102,338,520
JBrowse link
G Arid5a AT-rich interaction domain 5A ISO (MGI:MGI:5887181|PMID:27671645) RGD PMID:27671645 MGI:MGI:5887181 NCBI chr 9:42,871,907...42,886,725
Ensembl chr 9:42,871,950...42,884,855
JBrowse link
G Ass1 argininosuccinate synthase 1 IEP alveolar macrophages RGD PMID:9879717 RGD:4139906 NCBI chr 3:10,327,411...10,375,847
Ensembl chr 3:10,327,414...10,375,826
JBrowse link
G Axl Axl receptor tyrosine kinase ISO (PMID:19657094) RGD PMID:19657094 NCBI chr 1:82,550,892...82,580,761
Ensembl chr 1:82,549,420...82,580,761
JBrowse link
G B2m beta-2 microglobulin ISO (PMID:23144825) RGD PMID:23144825 NCBI chr 3:114,087,287...114,093,311
Ensembl chr 3:114,087,287...114,093,309
JBrowse link
G Bcl10 BCL10, immune signaling adaptor ISO
ISS
(PMID:16831874)
GO_REF:0000024
RGD
UniProt
PMID:16831874 GO_REF:0000024 NCBI chr 2:251,805,392...251,814,957
Ensembl chr 2:251,805,392...251,814,957
JBrowse link
G Bcr BCR activator of RhoGEF and GTPase ISO MGI:MGI:2154396 (MGI:MGI:71493|PMID:7889565) RGD PMID:7889565 MGI:MGI:71493 NCBI chr20:14,421,250...14,546,406
Ensembl chr20:14,421,141...14,545,772
JBrowse link
G Bpi bactericidal/permeability-increasing protein ISO (PMID:1937776) RGD PMID:1937776 NCBI chr 3:154,741,627...154,768,584
Ensembl chr 3:154,741,631...154,768,640
JBrowse link
G Bysl bystin-like IEP RGD PMID:15305856 RGD:2316201 NCBI chr 9:15,393,461...15,403,212
Ensembl chr 9:15,393,330...15,403,117
JBrowse link
G Cactin cactin, spliceosome C complex subunit ISO (PMID:20829348) RGD PMID:20829348 NCBI chr 7:11,258,526...11,266,509
Ensembl chr 7:11,261,201...11,266,630
JBrowse link
G Camp cathelicidin antimicrobial peptide IEP RGD PMID:19879657 RGD:2316237 NCBI chr 8:117,930,557...117,932,371
Ensembl chr 8:117,930,546...117,932,518
JBrowse link
G Capn2 calpain 2 IEP RGD PMID:23390485 RGD:13792657 NCBI chr13:100,878,649...100,928,811
Ensembl chr13:100,878,650...100,928,811
JBrowse link
G Casp1 caspase 1 ISO (PMID:11536016) RGD PMID:11536016 NCBI chr 8:2,605,743...2,614,637
Ensembl chr 8:2,604,962...2,614,631
JBrowse link
G Ccl2 C-C motif chemokine ligand 2 IEP
ISO
(MGI:MGI:3699670|PMID:14662900) RGD PMID:14662900, PMID:8921263 MGI:MGI:3699670, RGD:8549522 NCBI chr10:69,412,065...69,413,863
Ensembl chr10:69,412,017...69,413,870
JBrowse link
G Ccl20 C-C motif chemokine ligand 20 IEP RGD PMID:15618187 RGD:7483631 NCBI chr 9:88,918,359...88,921,017
Ensembl chr 9:88,918,433...88,921,001
JBrowse link
G Ccl5 C-C motif chemokine ligand 5 IEP RGD PMID:20578038 RGD:4889899 NCBI chr10:70,739,764...70,744,303
Ensembl chr10:70,739,800...70,744,315
JBrowse link
G Ccr5 C-C motif chemokine receptor 5 IEA
ISO
GO_REF:0000107
(PMID:10679098)
Ensembl
RGD
PMID:10679098 GO_REF:0000107 NCBI chr 8:133,192,398...133,215,599
Ensembl chr 8:133,197,032...133,215,614
JBrowse link
G Cd14 CD14 molecule IEP
IBA
ISO
ISS
PMID:21873635
(MGI:MGI:5645195|PMID:24380872), (MGI:MGI:80217|PMID:8612135)
(PMID:12594207), (PMID:8612135)
GO_REF:0000024
RGD
UniProt
PMID:8612135, PMID:12594207, PMID:24380872, PMID:22511970, PMID:21873635 GO_REF:0000024, MGI:MGI:5645195, MGI:MGI:80217, RGD:7183752, RGD:13792537 NCBI chr18:29,560,341...29,562,290
Ensembl chr18:29,560,365...29,562,153
JBrowse link
G Cd180 CD180 molecule ISO
IBA
MGI:MGI:3581654 (MGI:MGI:1860539|PMID:10880523)
PMID:21873635
RGD PMID:10880523, PMID:21873635 MGI:MGI:1860539, RGD:13792537 NCBI chr 2:32,820,275...32,833,223
Ensembl chr 2:32,820,322...32,833,125
JBrowse link
G Cd274 CD274 molecule IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:247,519,890...247,539,659
Ensembl chr 1:247,519,939...247,537,943
JBrowse link
G Cd300lb CD300 molecule-like family member b ISO MGI:MGI:4829592 (MGI:MGI:5446972|PMID:22772446) RGD PMID:22772446 MGI:MGI:5446972 NCBI chr10:103,471,082...103,481,071
Ensembl chr10:103,467,725...103,481,153
JBrowse link
G Cd36 CD36 molecule ISO MGI:MGI:2447190 (MGI:MGI:3587138|PMID:16061696) RGD PMID:16061696 MGI:MGI:3587138 NCBI chr 4:14,150,309...14,191,498
Ensembl chr 4:14,001,761...14,249,749
JBrowse link
G Cd40 CD40 molecule IEP RGD PMID:19271152 RGD:5491178 NCBI chr 3:161,519,789...161,534,943
Ensembl chr 3:161,519,743...161,534,704
JBrowse link
G Cd68 Cd68 molecule ISO (MGI:MGI:6274946|PMID:16157452) RGD PMID:16157452 MGI:MGI:6274946 NCBI chr10:56,268,726...56,270,605
Ensembl chr10:56,268,720...56,270,640
JBrowse link
G Cd80 Cd80 molecule ISO
IBA
(MGI:MGI:3828894|PMID:19047410)
PMID:21873635
RGD PMID:19047410, PMID:21873635 MGI:MGI:3828894, RGD:13792537 NCBI chr11:64,815,201...64,855,293
Ensembl chr11:64,827,635...64,855,353
JBrowse link
G Cd86 CD86 molecule IEP
IBA
ISO
PMID:21873635
(MGI:MGI:3828894|PMID:19047410)
RGD PMID:19047410, PMID:21039614, PMID:21873635 MGI:MGI:3828894, RGD:4892198, RGD:13792537 NCBI chr11:67,060,305...67,117,990
Ensembl chr11:67,082,193...67,118,795
JBrowse link
G Cdc73 cell division cycle 73 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:5319608|PMID:17911113)
Ensembl
UniProt
RGD
PMID:17911113 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5319608 NCBI chr13:60,403,771...60,496,511
Ensembl chr13:60,403,771...60,496,511
JBrowse link
G Cdk19 cyclin-dependent kinase 19 IEP RGD PMID:20066559 RGD:9590278 NCBI chr20:45,458,499...45,598,799
Ensembl chr20:45,458,558...45,598,798
JBrowse link
G Cdk4 cyclin-dependent kinase 4 ISO (MGI:MGI:78049|PMID:8543804) RGD PMID:8543804 MGI:MGI:78049 NCBI chr 7:70,345,971...70,352,689
Ensembl chr 7:70,349,863...70,352,418
JBrowse link
G Cebpb CCAAT/enhancer binding protein beta IDA RGD PMID:18405661 RGD:10401220 NCBI chr 3:164,424,502...164,425,933
Ensembl chr 3:164,424,515...164,425,910
JBrowse link
G Cebpe CCAAT/enhancer binding protein epsilon IEP RGD PMID:9593684 RGD:728287 NCBI chr15:33,356,119...33,357,517
Ensembl chr15:33,355,947...33,358,138
JBrowse link
G Cfh complement factor H IEP
ISO
(MGI:MGI:4421084|PMID:19828624) RGD PMID:19828624, PMID:12121434 MGI:MGI:4421084, RGD:632369 NCBI chr13:56,979,155...57,080,540
Ensembl chr13:56,978,607...57,080,622
JBrowse link
G Chmp5 charged multivesicular body protein 5 ISS
ISO
GO_REF:0000024
(PMID:27812135)
UniProt
RGD
PMID:27812135 GO_REF:0000024 NCBI chr 5:57,267,312...57,284,455
Ensembl chr 5:57,267,312...57,284,448
JBrowse link
G Cmpk2 cytidine/uridine monophosphate kinase 2 ISO (MGI:MGI:73245|PMID:7751651) RGD PMID:7751651 MGI:MGI:73245 NCBI chr 6:45,683,242...45,694,824
Ensembl chr 6:45,683,234...45,694,822
JBrowse link
G Cpeb1 cytoplasmic polyadenylation element binding protein 1 IEP RGD PMID:21620800 RGD:9685153 NCBI chr 1:143,171,457...143,278,485
Ensembl chr 1:143,171,264...143,278,485
JBrowse link
G Cr2 complement C3d receptor 2 ISO (MGI:MGI:4421084|PMID:19828624) RGD PMID:19828624 MGI:MGI:4421084 NCBI chr13:113,890,274...113,927,824
Ensembl chr13:113,890,272...113,927,877
JBrowse link
G Csf2 colony stimulating factor 2 IEP RGD PMID:18387647 RGD:5131517 NCBI chr10:39,602,089...39,604,070
Ensembl chr10:39,602,089...39,604,070
JBrowse link
G Csf3 colony stimulating factor 3 IEP RGD PMID:19732808 RGD:5133735 NCBI chr10:86,616,785...86,619,160
Ensembl chr10:86,616,785...86,619,157
JBrowse link
G Ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component ISO (MGI:MGI:5319608|PMID:17911113) RGD PMID:17911113 MGI:MGI:5319608 NCBI chr 1:175,839,140...175,869,167
Ensembl chr 1:175,839,108...175,869,165
JBrowse link
G Ctsg cathepsin G IEA
ISO
GO_REF:0000107
(PMID:1937776)
Ensembl
RGD
PMID:1937776 GO_REF:0000107 NCBI chr15:35,107,333...35,113,678
Ensembl chr15:35,111,091...35,113,678
JBrowse link
G Cx3cr1 C-X3-C motif chemokine receptor 1 IEP
ISO
UniProtKB:P05067 (MGI:MGI:6162390|PMID:23499256) RGD PMID:23499256, PMID:10422773 MGI:MGI:6162390, RGD:4892028 NCBI chr 8:128,740,756...128,754,514
Ensembl chr 8:128,740,756...128,754,514
JBrowse link
G Cxcl1 C-X-C motif chemokine ligand 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:18,743,678...18,745,457
Ensembl chr14:18,743,685...18,745,457
JBrowse link
G Cxcl10 C-X-C motif chemokine ligand 10 ISO
IBA
(PMID:23776175)
PMID:21873635
RGD PMID:23776175, PMID:21873635 RGD:13792537 NCBI chr14:17,210,733...17,212,930
Ensembl chr14:17,210,733...17,212,930
JBrowse link
G Cxcl11 C-X-C motif chemokine ligand 11 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:17,195,395...17,198,170
Ensembl chr14:17,195,014...17,198,291
JBrowse link
G Cxcl13 C-X-C motif chemokine ligand 13 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:15,253,146...15,258,221
Ensembl chr14:15,253,125...15,258,207
JBrowse link
G Cxcl16 C-X-C motif chemokine ligand 16 ISO (MGI:MGI:1891794|PMID:11017100) RGD PMID:11017100 MGI:MGI:1891794 NCBI chr10:57,060,005...57,064,600
Ensembl chr10:57,060,007...57,064,600
JBrowse link
G Cxcl2 C-X-C motif chemokine ligand 2 IEP
IBA
PMID:21873635 RGD
GO_Central
PMID:16239643, PMID:21873635 RGD:5135237, RGD:13792537 NCBI chr14:18,731,346...18,733,391
Ensembl chr14:18,731,378...18,733,391
JBrowse link
G Cxcl3 C-X-C motif chemokine ligand 3 IEP
IBA
PMID:21873635 RGD
GO_Central
PMID:10738946, PMID:21873635 RGD:5135239, RGD:13792537 NCBI chr14:18,820,168...18,839,659
Ensembl chr14:18,820,168...18,839,595
JBrowse link
G Cxcl6 C-X-C motif chemokine ligand 6 IEP
IBA
IEA
ISO
PMID:21873635
GO_REF:0000107
(PMID:8399143)
Ensembl
RGD
PMID:8399143, PMID:15778492, PMID:21873635 GO_REF:0000107, RGD:5135262, RGD:13792537 NCBI chr14:18,860,201...18,920,839
Ensembl chr14:18,860,264...18,862,407
JBrowse link
G Cxcl9 C-X-C motif chemokine ligand 9 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:17,228,832...17,233,743
Ensembl chr14:17,228,856...17,234,712
JBrowse link
G Cyp11a1 cytochrome P450, family 11, subfamily a, polypeptide 1 IEP RGD PMID:20665543 RGD:4145535 NCBI chr 8:62,798,317...62,809,848
Ensembl chr 8:62,779,875...62,809,893
JBrowse link
G Cyp17a1 cytochrome P450, family 17, subfamily a, polypeptide 1 IEP RGD PMID:20665543 RGD:4145535 NCBI chr 1:266,422,127...266,429,947
Ensembl chr 1:266,422,132...266,428,239
JBrowse link
G Dab2ip DAB2 interacting protein IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:4453088|PMID:19948740)
(PMID:19948740)
Ensembl
UniProt
RGD
PMID:19948740 GO_REF:0000024, GO_REF:0000107, MGI:MGI:4453088 NCBI chr 3:14,889,263...15,060,286
Ensembl chr 3:14,889,510...15,060,286
JBrowse link
G Defa10 defensin alpha 10 ISO
IBA
MGI:MGI:94880|MGI:MGI:94882|MGI:MGI:99582 (MGI:MGI:3698376|PMID:11248802)
PMID:21873635
RGD PMID:11248802, PMID:21873635 MGI:MGI:3698376, RGD:13792537 NCBI chr16:75,498,236...75,499,012
Ensembl chr16:75,498,236...75,499,012
JBrowse link
G Defa11 defensin alpha 11 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:75,517,421...75,519,605
Ensembl chr16:75,517,505...75,518,336
JBrowse link
G Defa24 defensin alpha 24 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:75,345,086...75,346,122
Ensembl chr16:75,345,086...75,346,122
JBrowse link
G Defa5 defensin alpha 5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:75,338,050...75,340,401
Ensembl chr16:75,338,052...75,340,360
JBrowse link
G Defa6 defensin alpha 6 ISO
IBA
MGI:MGI:94880|MGI:MGI:94882|MGI:MGI:94883 (MGI:MGI:3698376|PMID:11248802)
PMID:21873635
RGD PMID:11248802, PMID:21873635 MGI:MGI:3698376, RGD:13792537 NCBI chr16:75,400,781...75,401,655
Ensembl chr16:75,400,781...75,401,655
JBrowse link
G Defa8 defensin alpha 8 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:75,428,675...75,429,568
Ensembl chr16:75,428,675...75,429,568
JBrowse link
G Defa9 defensin alpha 9 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:75,465,710...75,466,604
Ensembl chr16:75,465,710...75,466,606
JBrowse link
G Defal1 defensin alpha-like 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:75,366,925...75,367,985
Ensembl chr16:75,366,929...75,367,906
JBrowse link
G Ednrb endothelin receptor type B IEP RGD PMID:18091567 RGD:4892289 NCBI chr15:88,004,775...88,036,354
Ensembl chr15:88,006,977...88,036,354
JBrowse link
G Entpd1 ectonucleoside triphosphate diphosphohydrolase 1 IEP RGD PMID:23990338 RGD:9685490 NCBI chr 1:259,692,020...259,818,922
Ensembl chr 1:259,739,955...259,819,494
JBrowse link
G Entpd2 ectonucleoside triphosphate diphosphohydrolase 2 IEP RGD PMID:23990338 RGD:9685490 NCBI chr 3:2,617,795...2,623,818
Ensembl chr 3:2,617,805...2,623,445
JBrowse link
G Epas1 endothelial PAS domain protein 1 IEP RGD PMID:12099714 RGD:11041576 NCBI chr 6:10,306,508...10,385,239
Ensembl chr 6:10,306,405...10,387,265
JBrowse link
G Fcar Fc fragment of IgA receptor ISO (PMID:25339672) RGD PMID:25339672 NCBI chr 1:73,230,392...73,263,462
Ensembl chr 1:73,230,390...73,264,302
JBrowse link
G Fcgr2b Fc fragment of IgG receptor IIb IEP RGD PMID:19106808 RGD:5147925 NCBI chr13:89,329,298...89,343,916
Ensembl chr13:89,327,794...89,433,815
JBrowse link
G Fcgr3a Fc fragment of IgG receptor IIIa IDA RGD PMID:19106808 RGD:5147925 NCBI chr13:89,385,775...89,396,047
Ensembl chr13:89,385,859...89,396,051
JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 IEP RGD PMID:30250515 RGD:25330356 NCBI chr16:71,265,390...71,319,046
Ensembl chr16:71,266,248...71,319,449
JBrowse link
G Fn1 fibronectin 1 IEP RGD PMID:11819312 RGD:7205475 NCBI chr 9:78,900,111...78,969,018
Ensembl chr 9:78,900,103...78,969,078
JBrowse link
G Fubp1 far upstream element binding protein 1 IEP RGD PMID:23797733 RGD:13673879 NCBI chr 2:257,425,676...257,452,745
Ensembl chr 2:257,425,679...257,449,568
JBrowse link
G Gata1 GATA binding protein 1 IDA RGD PMID:17687519 RGD:5131526 NCBI chr  X:15,273,937...15,281,759
Ensembl chr  X:15,378,789...15,382,066
JBrowse link
G Gbp2 guanylate binding protein 2 ISO
IEA
(MGI:MGI:4412460|PMID:18025219)
GO_REF:0000107
RGD
Ensembl
PMID:18025219 GO_REF:0000107, MGI:MGI:4412460 NCBI chr 2:248,276,795...248,293,784
Ensembl chr 2:248,276,709...248,293,784
JBrowse link
G Gfer growth factor, augmenter of liver regeneration IEP RGD PMID:23073658 RGD:9685733 NCBI chr10:14,059,347...14,061,703
Ensembl chr10:14,059,347...14,061,703
JBrowse link
G Gfi1 growth factor independent 1 transcriptional repressor ISO (PMID:20547752) RGD PMID:20547752 NCBI chr14:3,058,035...3,073,332
Ensembl chr14:3,058,993...3,068,371
JBrowse link
G Ghsr growth hormone secretagogue receptor IEP RGD PMID:15155262 RGD:12905047 NCBI chr 2:113,065,953...113,071,265
Ensembl chr 2:113,066,885...113,070,261
JBrowse link
G Grk6 G protein-coupled receptor kinase 6 IEP RGD PMID:23359120 RGD:13792782 NCBI chr17:9,705,917...9,721,921
Ensembl chr17:9,703,453...9,721,574
JBrowse link
G Gstp1 glutathione S-transferase pi 1 ISO
ISS
(MGI:MGI:5009411|PMID:16023107)
GO_REF:0000024
RGD
BHF-UCL
PMID:16023107 GO_REF:0000024, MGI:MGI:5009411 NCBI chr 1:219,291,679...219,294,147
Ensembl chr 1:219,291,679...219,294,147
JBrowse link
G Hamp hepcidin antimicrobial peptide IEP RGD PMID:23506423 RGD:11041627 NCBI chr 1:89,368,021...89,369,960
Ensembl chr 1:89,368,021...89,369,960
JBrowse link
G Havcr2 hepatitis A virus cellular receptor 2 ISO (MGI:MGI:5705210|PMID:25337993) RGD PMID:25337993 MGI:MGI:5705210 NCBI chr10:31,561,838...31,590,624
Ensembl chr10:31,561,895...31,588,943
JBrowse link
G Hdac5 histone deacetylase 5 IEP RGD PMID:22933299 RGD:9590257 NCBI chr10:90,140,183...90,169,853
Ensembl chr10:90,140,183...90,151,042
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha IEP RGD PMID:19940979 RGD:5147884 NCBI chr 6:96,810,868...96,856,303
Ensembl chr 6:96,810,907...96,856,052
JBrowse link
G Hmgb1 high mobility group box 1 ISO (MGI:MGI:6244743|PMID:28096568) RGD PMID:28096568 MGI:MGI:6244743 NCBI chr12:7,082,529...7,090,246
Ensembl chr16:37,500,017...37,502,237
JBrowse link
G Hmgb2 high mobility group box 2 ISO (PMID:19811285) RGD PMID:19811285 NCBI chr16:36,077,615...36,080,191
Ensembl chr16:36,077,617...36,080,191
Ensembl chr11:36,077,617...36,080,191
JBrowse link
G Hmgcs2 3-hydroxy-3-methylglutaryl-CoA synthase 2 IEP RGD PMID:11578593 RGD:1599044 NCBI chr 2:200,452,623...200,480,785
Ensembl chr 2:200,452,624...200,479,423
JBrowse link
G Hnrnpm heterogeneous nuclear ribonucleoprotein M IEP RGD PMID:14597422 RGD:10054261 NCBI chr 7:18,516,253...18,554,536
Ensembl chr 7:18,516,512...18,554,227
JBrowse link
G Hsf1 heat shock transcription factor 1 IEP RGD PMID:21540803 RGD:10402943 NCBI chr 7:117,538,523...117,565,478
Ensembl chr 7:117,538,523...117,565,478
JBrowse link
G Icam1 intercellular adhesion molecule 1 IEP RGD PMID:20674665 RGD:4145373 NCBI chr 8:22,035,287...22,047,049
Ensembl chr 8:22,035,256...22,047,059
JBrowse link
G Ifng interferon gamma ISO (MGI:MGI:3821815|PMID:18791161) RGD PMID:18791161 MGI:MGI:3821815 NCBI chr 7:61,337,383...61,341,419
Ensembl chr 7:61,337,381...61,341,419
JBrowse link
G Il10 interleukin 10 ISO (MGI:MGI:3828894|PMID:19047410), (MGI:MGI:5013871|PMID:21609717), (MGI:MGI:6201792|PMID:23071313) RGD PMID:19047410, PMID:21609717, PMID:23071313 MGI:MGI:3828894, MGI:MGI:5013871, MGI:MGI:6201792 NCBI chr13:47,738,933...47,743,392
Ensembl chr13:47,739,526...47,743,392
JBrowse link
G Il12a interleukin 12A ISO
IEA
(MGI:MGI:3828894|PMID:19047410)
GO_REF:0000107
RGD
Ensembl
PMID:19047410 GO_REF:0000107, MGI:MGI:3828894 NCBI chr 2:165,076,945...165,083,996
Ensembl chr 2:165,076,607...165,084,318
JBrowse link
G Il12b interleukin 12B ISO (MGI:MGI:4412460|PMID:18025219), (MGI:MGI:5013875|PMID:21606371) RGD PMID:18025219, PMID:21606371 MGI:MGI:4412460, MGI:MGI:5013875 NCBI chr10:30,034,447...30,048,774
Ensembl chr10:30,038,709...30,048,085
JBrowse link
G Il18 interleukin 18 IEP RGD PMID:11739527 RGD:729357 NCBI chr 8:55,009,666...55,016,286
Ensembl chr 8:54,993,859...55,016,299
JBrowse link
G Il1a interleukin 1 alpha IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:121,824,712...121,836,122
Ensembl chr 3:121,825,412...121,836,086
JBrowse link
G Il1b interleukin 1 beta IEP
IBA
PMID:21873635 RGD
GO_Central
PMID:23200736, PMID:21873635 RGD:7175528, RGD:13792537 NCBI chr 3:121,876,256...121,882,637
Ensembl chr 3:121,876,263...121,882,726
JBrowse link
G Il1f10 interleukin 1 family member 10 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:1,408,560...1,416,601
Ensembl chr 3:1,413,671...1,416,599
JBrowse link
G Il24 interleukin 24 IEP RGD PMID:12182458 RGD:5147432 NCBI chr13:47,618,451...47,623,849
Ensembl chr13:47,618,452...47,623,849
JBrowse link
G Il36a interleukin 36, alpha IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:1,330,790...1,335,811
Ensembl chr 3:1,331,226...1,335,775
JBrowse link
G Il36b interleukin 36, beta IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:1,366,123...1,464,851
Ensembl chr 3:1,366,119...1,371,626
JBrowse link
G Il36g interleukin 36, gamma IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:1,285,658...1,291,836
Ensembl chr 3:1,285,664...1,291,865
JBrowse link
G Il36rn interleukin 36 receptor antagonist IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:1,385,256...1,392,275
Ensembl chr 3:1,385,654...1,392,275
JBrowse link
G Il6 interleukin 6 ISO
IEP
(PMID:23776175)
(MGI:MGI:3828894|PMID:19047410), (MGI:MGI:5013875|PMID:21606371), (MGI:MGI:5543352|PMID:23610142)
RGD PMID:19047410, PMID:21606371, PMID:23610142, PMID:23776175, PMID:2789217 MGI:MGI:3828894, MGI:MGI:5013875, MGI:MGI:5543352, RGD:11049548 NCBI chr 4:3,043,231...3,047,807
Ensembl chr 4:3,043,231...3,047,807
JBrowse link
G Irak1 interleukin-1 receptor-associated kinase 1 IEP
IBA
PMID:21873635 RGD
GO_Central
PMID:15793310, PMID:21873635 RGD:1579809, RGD:13792537 NCBI chr  X:156,716,469...156,726,367
Ensembl chr  X:156,716,604...156,725,977
JBrowse link
G Irf3 interferon regulatory factor 3 ISO (MGI:MGI:5013875|PMID:21606371) RGD PMID:21606371 MGI:MGI:5013875 NCBI chr 1:100,992,244...100,997,202
Ensembl chr 1:100,992,405...100,997,198
JBrowse link
G Irf8 interferon regulatory factor 8 ISO MGI:MGI:1926332 (MGI:MGI:3653161|PMID:9348310) RGD PMID:9348310 MGI:MGI:3653161 NCBI chr19:54,314,859...54,336,643
Ensembl chr19:54,314,865...54,336,640
JBrowse link
G Irgm immunity-related GTPase M ISO (PMID:25891078) RGD PMID:25891078 NCBI chr10:34,213,885...34,221,968
Ensembl chr10:34,213,936...34,221,928
JBrowse link
G Jak2 Janus kinase 2 ISO (MGI:MGI:5013875|PMID:21606371) RGD PMID:21606371 MGI:MGI:5013875 NCBI chr 1:247,398,667...247,457,521
Ensembl chr 1:247,398,598...247,458,509
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit ISO (PMID:25110868) RGD PMID:25110868 NCBI chr 5:114,011,184...114,014,277
Ensembl chr 5:114,011,189...114,014,277
JBrowse link
G Klrk1 killer cell lectin like receptor K1 ISO
IEA
(MGI:MGI:3028810|PMID:14764662)
GO_REF:0000107
RGD
Ensembl
PMID:14764662 GO_REF:0000107, MGI:MGI:3028810 NCBI chr 4:163,392,652...163,403,735
Ensembl chr 4:163,393,217...163,403,653
JBrowse link
G Kmo kynurenine 3-monooxygenase IEP RGD PMID:26524415 RGD:13703043 NCBI chr13:93,684,324...93,715,378
Ensembl chr13:93,684,437...93,716,227
JBrowse link
G Lbp lipopolysaccharide binding protein ISO
ISS
(MGI:MGI:5645195|PMID:24380872)
(PMID:12594207), (PMID:24120359)
GO_REF:0000024
RGD
UniProt
PMID:12594207, PMID:24120359, PMID:24380872 GO_REF:0000024, MGI:MGI:5645195 NCBI chr 3:154,786,232...154,812,910
Ensembl chr 3:154,786,215...154,813,464
JBrowse link
G Lcn2 lipocalin 2 IEP RGD PMID:19329498 RGD:2316495 NCBI chr 3:11,414,189...11,417,534
Ensembl chr 3:11,414,186...11,417,546
JBrowse link
G Ldoc1 LDOC1, regulator of NFKB signaling ISO (PMID:27812135) RGD PMID:27812135 NCBI chr  X:144,699,737...144,778,947 JBrowse link
G Lilrb2 leukocyte immunoglobulin like receptor B2 ISO (PMID:14971032) RGD PMID:14971032 NCBI chr 1:63,734,135...63,741,986
Ensembl chr 1:63,734,135...63,741,982
JBrowse link
G Litaf lipopolysaccharide-induced TNF factor ISO MGI:MGI:3687962 (MGI:MGI:3687609|PMID:16954198) RGD PMID:16954198 MGI:MGI:3687609 NCBI chr10:4,753,546...4,763,272
Ensembl chr10:4,719,713...4,763,510
JBrowse link
G Ltc4s leukotriene C4 synthase IEP RGD PMID:9794912 RGD:2316634 NCBI chr10:35,736,486...35,743,088
Ensembl chr10:35,737,664...35,739,625
JBrowse link
G Ly96 lymphocyte antigen 96 ISO (MGI:MGI:5645195|PMID:24380872) RGD PMID:24380872 MGI:MGI:5645195 NCBI chr 5:1,972,212...1,989,448 JBrowse link
G Malt1 MALT1 paracaspase ISO (PMID:16831874) RGD PMID:16831874 NCBI chr18:61,108,712...61,162,446
Ensembl chr18:61,109,069...61,162,445
JBrowse link
G Map2k3 mitogen activated protein kinase kinase 3 IDA RGD PMID:14670949 RGD:7495812 NCBI chr10:45,089,455...45,110,802
Ensembl chr10:47,182,433...47,203,753
JBrowse link
G Map2k7 mitogen activated protein kinase kinase 7 ISO (MGI:MGI:1101248|PMID:9405446) RGD PMID:9405446 MGI:MGI:1101248 NCBI chr12:2,546,278...2,555,310
Ensembl chr12:2,548,218...2,555,164
JBrowse link
G Mapk14 mitogen activated protein kinase 14 ISO (PMID:23776175) RGD PMID:23776175 NCBI chr20:5,933,290...5,995,137
Ensembl chr20:5,933,303...5,995,137
JBrowse link
G Mapk8 mitogen-activated protein kinase 8 ISO
IEA
(PMID:23776175)
GO_REF:0000107
RGD
Ensembl
PMID:23776175 GO_REF:0000107 NCBI chr16:9,620,854...9,709,342
Ensembl chr16:9,625,177...9,709,347
JBrowse link
G Mapk9 mitogen-activated protein kinase 9 IEP RGD PMID:9475517 RGD:2304245 NCBI chr10:35,333,859...35,374,364
Ensembl chr10:35,333,859...35,374,355
JBrowse link
G Mef2c myocyte enhancer factor 2C IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:3829850|PMID:18955699)
Ensembl
UniProt
RGD
PMID:18955699 GO_REF:0000024, GO_REF:0000107, MGI:MGI:3829850 NCBI chr 2:11,658,534...11,822,788
Ensembl chr 2:11,658,568...11,822,787
JBrowse link
G Mir107 microRNA 107 ISO (MGI:MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:MGI:3817382 NCBI chr 1:253,128,250...253,128,336
Ensembl chr 1:253,128,250...253,128,336
JBrowse link
G Mir10a microRNA 10a ISO (MGI:MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:MGI:3817382 NCBI chr10:84,165,950...84,166,059
Ensembl chr10:84,165,950...84,166,059
JBrowse link
G Mir125a microRNA 125a ISO (MGI:MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:MGI:3817382 NCBI chr 1:59,704,827...59,704,911
Ensembl chr 1:59,704,827...59,704,911
JBrowse link
G Mir139 microRNA 139 ISO (MGI:MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:MGI:5050043 NCBI chr 1:166,589,545...166,589,612
Ensembl chr 1:166,589,545...166,589,612
JBrowse link
G Mir140 microRNA 140 ISO (MGI:MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:MGI:3817382 NCBI chr19:39,608,951...39,609,049
Ensembl chr19:39,608,951...39,609,049
JBrowse link
G Mir142 microRNA 142 ISO (MGI:MGI:5013506|PMID:21536037) RGD PMID:21536037 MGI:MGI:5013506 NCBI chr10:75,050,839...75,050,925
Ensembl chr10:75,050,832...75,050,942
JBrowse link
G Mir146a microRNA 146a ISO (MGI:MGI:3821815|PMID:18791161), (MGI:MGI:5050043|PMID:21247879) RGD PMID:18791161, PMID:21247879 MGI:MGI:3821815, MGI:MGI:5050043 NCBI chr10:28,962,476...28,962,570
Ensembl chr10:28,962,476...28,962,570
JBrowse link
G Mir146b microRNA 146b ISO (MGI:MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:MGI:5050043 NCBI chr 1:266,089,488...266,089,575
Ensembl chr 1:266,089,488...266,089,575
JBrowse link
G Mir147 microRNA 147 ISO (MGI:MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:MGI:5050043 NCBI chr 3:114,775,343...114,775,421
Ensembl chr 3:114,775,343...114,775,421
JBrowse link
G Mir150 microRNA 150 ISO (MGI:MGI:3817382|PMID:18762567), (MGI:MGI:5050043|PMID:21247879) RGD PMID:18762567, PMID:21247879 MGI:MGI:3817382, MGI:MGI:5050043 NCBI chr 1:101,115,974...101,116,058
Ensembl chr 1:101,115,974...101,116,058
JBrowse link
G Mir155 microRNA 155 ISO (MGI:MGI:3817382|PMID:18762567), (MGI:MGI:5050043|PMID:21247879) RGD PMID:18762567, PMID:21247879 MGI:MGI:3817382, MGI:MGI:5050043 NCBI chr11:24,176,603...24,176,667
Ensembl chr11:24,176,603...24,176,667
JBrowse link
G Mir16 microRNA 16 ISO (MGI:MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:MGI:3817382 NCBI chr 2:165,606,072...165,606,166
Ensembl chr 2:165,606,072...165,606,166
JBrowse link
G Mir181a2 microRNA 181a-2 ISO (MGI:MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:MGI:3817382 NCBI chr 3:23,150,352...23,150,468
Ensembl chr 3:23,150,352...23,150,468
JBrowse link
G Mir181b2 microRNA 181b-2 ISO (MGI:MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:MGI:3817382 NCBI chr 3:23,151,455...23,151,542
Ensembl chr 3:23,151,455...23,151,542
JBrowse link
G Mir181c microRNA 181c ISO (MGI:MGI:3817382|PMID:18762567), (MGI:MGI:5050043|PMID:21247879) RGD PMID:18762567, PMID:21247879 MGI:MGI:3817382, MGI:MGI:5050043 NCBI chr19:25,290,211...25,290,316
Ensembl chr19:25,290,211...25,290,316
JBrowse link
G Mir184 microRNA 184 ISO (MGI:MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:MGI:5050043 NCBI chr 8:97,175,657...97,175,733
Ensembl chr 8:97,175,657...97,175,733
JBrowse link
G Mir193a microRNA 193a ISO (MGI:MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:MGI:5050043 NCBI chr10:67,065,885...67,065,996
Ensembl chr10:67,065,885...67,065,996
JBrowse link
G Mir194-1 microRNA 194-1 ISO (MGI:MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:MGI:3817382 NCBI chr13:103,250,576...103,250,658
Ensembl chr13:103,250,576...103,250,658
JBrowse link
G Mir194-2 microRNA 194-2 ISO (MGI:MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:MGI:3817382 NCBI chr 1:221,634,786...221,634,870
Ensembl chr 1:221,634,786...221,634,870
JBrowse link
G Mir199a2 microRNA 199a-2 ISO MGI:MGI:2676863 (MGI:MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:MGI:5050043 NCBI chr13:80,125,487...80,125,596
Ensembl chr13:80,125,487...80,125,596
JBrowse link
G Mir200c microRNA 200c ISO (MGI:MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:MGI:5050043 NCBI chr 4:157,236,786...157,236,854 JBrowse link
G Mir202 microRNA 202 ISO (MGI:MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:MGI:3817382 NCBI chr 1:212,295,630...212,295,701
Ensembl chr 1:212,295,630...212,295,701
JBrowse link
G Mir205 microRNA 205 ISO (MGI:MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:MGI:3817382 NCBI chr13:112,233,283...112,233,390
Ensembl chr13:112,233,283...112,233,390
JBrowse link
G Mir210 microRNA 210 ISO (MGI:MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:MGI:5050043 NCBI chr 1:214,208,355...214,208,464 JBrowse link
G Mir217 microRNA 217 ISO (MGI:MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:MGI:3817382 NCBI chr14:113,119,529...113,119,633
Ensembl chr14:113,119,529...113,119,633
JBrowse link
G Mir223 microRNA 223 ISO
IEP
(MGI:MGI:3817382|PMID:18762567), (MGI:MGI:3821815|PMID:18791161), (MGI:MGI:5050043|PMID:21247879) RGD PMID:18762567, PMID:18791161, PMID:21247879, PMID:29707878 MGI:MGI:3817382, MGI:MGI:3821815, MGI:MGI:5050043, RGD:25823197 NCBI chr  X:65,367,812...65,367,921
Ensembl chr  X:65,367,812...65,367,921
JBrowse link
G Mir224 microRNA 224 ISO (MGI:MGI:3817382|PMID:18762567), (MGI:MGI:5050043|PMID:21247879) RGD PMID:18762567, PMID:21247879 MGI:MGI:3817382, MGI:MGI:5050043 NCBI chr  X:152,223,754...152,223,835
Ensembl chr  X:152,223,754...152,223,835
JBrowse link
G Mir23b microRNA 23b ISO (MGI:MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:MGI:3817382 NCBI chr17:823,222...823,318
Ensembl chr17:823,222...823,318
JBrowse link
G Mir24-2 microRNA 24-2 ISO (MGI:MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:MGI:3817382 NCBI chr19:25,318,863...25,318,970
Ensembl chr19:25,318,863...25,318,970
JBrowse link
G Mir26a microRNA 26a ISO (MGI:MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:MGI:3817382 NCBI chr 8:127,714,441...127,714,530
Ensembl chr 8:127,714,441...127,714,530
JBrowse link
G Mir26b microRNA 26b ISO (MGI:MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:MGI:3817382 NCBI chr 9:81,675,275...81,675,359
Ensembl chr 9:81,675,275...81,675,359
JBrowse link
G Mir27a microRNA 27a ISO (MGI:MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:MGI:3817382 NCBI chr19:25,318,736...25,318,822
Ensembl chr19:25,318,736...25,318,822
JBrowse link
G Mir29a microRNA 29a ISO (MGI:MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:MGI:3817382 NCBI chr 4:58,343,931...58,344,018 JBrowse link
G Mir29b1 microRNA 29b-1 ISO (MGI:MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:MGI:3817382 NCBI chr 4:58,344,310...58,344,390
Ensembl chr 4:58,344,310...58,344,390
JBrowse link
G Mir29b2 microRNA 29b-2 ISO (MGI:MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:MGI:3817382 NCBI chr13:113,782,057...113,782,137
Ensembl chr13:113,782,057...113,782,140
JBrowse link
G Mir30b microRNA 30b ISO (MGI:MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:MGI:3817382 NCBI chr 7:109,282,662...109,282,747
Ensembl chr 7:109,282,658...109,282,752
JBrowse link
G Mir30c1 microRNA 30c-1 ISO (MGI:MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:MGI:3817382 NCBI chr 5:139,699,877...139,699,965
Ensembl chr 5:139,699,877...139,699,965
JBrowse link
G Mir30c2 microRNA 30c-2 ISO (MGI:MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:MGI:3817382 NCBI chr 9:29,562,376...29,562,459
Ensembl chr 9:29,562,376...29,562,459
JBrowse link
G Mir30d microRNA 30d ISO (MGI:MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:MGI:3817382 NCBI chr 7:109,286,463...109,286,544
Ensembl chr 7:109,286,463...109,286,544
JBrowse link
G Mir323 microRNA 323 ISO (MGI:MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:MGI:5050043 NCBI chr 6:133,861,199...133,861,284
Ensembl chr 6:133,861,199...133,861,284
JBrowse link
G Mir342 microRNA 342 ISO (MGI:MGI:3817382|PMID:18762567), (MGI:MGI:5050043|PMID:21247879) RGD PMID:18762567, PMID:21247879 MGI:MGI:3817382, MGI:MGI:5050043 NCBI chr 6:132,561,169...132,561,267
Ensembl chr 6:132,561,169...132,561,267
JBrowse link
G Mir345 microRNA 345 ISO (MGI:MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:MGI:5050043 NCBI chr 6:132,748,968...132,749,063
Ensembl chr 6:132,748,968...132,749,063
JBrowse link
G Mir381 microRNA 381 ISO (MGI:MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:MGI:5050043 NCBI chr 6:133,876,615...133,876,675
Ensembl chr 6:133,876,586...133,876,693
JBrowse link
G Mir383 microRNA 383 ISO (MGI:MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:MGI:5050043 NCBI chr16:57,519,675...57,519,748
Ensembl chr16:57,519,675...57,519,748
JBrowse link
G Mir409 microRNA 409 ISO (MGI:MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:MGI:5050043 NCBI chr 6:133,893,419...133,893,495 JBrowse link
G Mir425 microRNA 425 ISO (MGI:MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:MGI:3817382 NCBI chr 8:117,354,821...117,354,903
Ensembl chr 8:117,354,821...117,354,903
JBrowse link
G Mir431 microRNA 431 ISO (MGI:MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:MGI:5050043 NCBI chr 6:133,711,425...133,711,538
Ensembl chr 6:133,711,425...133,711,538
JBrowse link
G Mir433 microRNA 433 ISO (MGI:MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:MGI:5050043 NCBI chr 6:133,712,334...133,712,426
Ensembl chr 6:133,712,334...133,712,426
JBrowse link
G Mir484 microRNA 484 ISO (MGI:MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:MGI:3817382 NCBI chr10:27,845...27,921
Ensembl chr10:27,845...27,921
JBrowse link
G Mir486 microRNA 486 ISO (MGI:MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:MGI:3817382 Ensembl chr16:73,680,363...73,680,490 JBrowse link
G Mir494 microRNA 494 ISO (MGI:MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:MGI:5050043 NCBI chr 6:133,864,370...133,864,452
Ensembl chr 6:133,864,369...133,864,453
JBrowse link
G Mir500 microRNA 500 ISO (MGI:MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:MGI:5050043 NCBI chr  X:16,121,332...16,121,411
Ensembl chr  X:16,121,322...16,121,413
JBrowse link
G Mir598 microRNA 598 ISO (MGI:MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:MGI:5050043 NCBI chr15:47,057,496...47,057,574
Ensembl chr15:47,057,496...47,057,575
JBrowse link
G Mir7-1 microRNA 7-1 ISO MGI:MGI:3619437 (MGI:MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:MGI:5050043 NCBI chr17:6,675,016...6,675,112
Ensembl chr17:6,675,016...6,675,112
JBrowse link
G Mir7b microRNA 7b ISO (MGI:MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:MGI:5050043 NCBI chr 9:10,812,432...10,812,541
Ensembl chr 9:10,812,432...10,812,541
JBrowse link
G Mir98 microRNA 98 ISO (MGI:MGI:5013871|PMID:21609717) RGD PMID:21609717 MGI:MGI:5013871 NCBI chr  X:21,583,875...21,583,982
Ensembl chr  X:21,583,875...21,583,982
JBrowse link
G Mirlet7g microRNA let-7g ISO (MGI:MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:MGI:3817382 NCBI chr 8:114,874,457...114,874,544
Ensembl chr 8:114,874,454...114,874,550
JBrowse link
G Mmp1 matrix metallopeptidase 1 IEP RGD PMID:21683124 RGD:7207286 NCBI chr 8:5,703,206...5,723,593
Ensembl chr 8:5,703,206...5,723,591
JBrowse link
G Mmp9 matrix metallopeptidase 9 IEP RGD PMID:21683124 RGD:7207286 NCBI chr 3:161,413,410...161,421,473
Ensembl chr 3:161,413,298...161,421,520
JBrowse link
G Mrc1 mannose receptor, C type 1 ISO (MGI:MGI:5486412|PMID:22832163) RGD PMID:22832163 MGI:MGI:5486412 NCBI chr17:81,352,700...81,433,743
Ensembl chr17:81,352,700...81,433,743
JBrowse link
G Myd88 MYD88, innate immune signal transduction adaptor ISO (MGI:MGI:6355543|PMID:17660297) RGD PMID:17660297 MGI:MGI:6355543 NCBI chr 8:128,022,512...128,027,462
Ensembl chr 8:128,022,473...128,026,841
JBrowse link
G Ncl nucleolin IMP RGD PMID:21309751 RGD:9686449 NCBI chr 9:93,369,119...93,377,643
Ensembl chr 9:93,368,932...93,377,643
JBrowse link
G NEWGENE_1565644 leucine zipper down-regulated in cancer 1 IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr  X:144,807,030...144,808,625 JBrowse link
G Nfkb1 nuclear factor kappa B subunit 1 ISO
IEA
IDA
(PMID:23776175)
GO_REF:0000107
RGD
Ensembl
PMID:23776175, PMID:16842873 GO_REF:0000107, RGD:10045666 NCBI chr 2:240,773,520...240,890,053
Ensembl chr 2:240,773,456...240,866,689
JBrowse link
G Nfkbib NFKB inhibitor beta ISO
IBA
IEA
(MGI:MGI:4437182|PMID:20060382)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:20060382, PMID:21873635 GO_REF:0000107, MGI:MGI:4437182, RGD:13792537 NCBI chr 1:86,941,073...86,948,845
Ensembl chr 1:86,941,074...86,948,845
JBrowse link
G Nfkbil1 NFKB inhibitor like 1 ISO
ISS
(PMID:20829348)
GO_REF:0000024
RGD
UniProt
PMID:20829348 GO_REF:0000024 NCBI chr20:4,823,590...4,839,202
Ensembl chr20:4,822,935...4,839,202
JBrowse link
G Nlrp3 NLR family, pyrin domain containing 3 ISO (PMID:12483741), (PMID:28847925)
(MGI:MGI:6095076|PMID:28847925)
RGD PMID:12483741, PMID:28847925 MGI:MGI:6095076 NCBI chr10:45,884,324...45,918,290
Ensembl chr10:45,893,018...45,918,254
JBrowse link
G Nod2 nucleotide-binding oligomerization domain containing 2 ISO (PMID:27812135) RGD PMID:27812135 NCBI chr19:19,342,061...19,389,366
Ensembl chr19:19,332,594...19,377,492
JBrowse link
G Nos2 nitric oxide synthase 2 IEP
ISO
IEA
(MGI:MGI:3821815|PMID:18791161), (MGI:MGI:4412460|PMID:18025219)
GO_REF:0000107
RGD
Ensembl
PMID:18025219, PMID:18791161, PMID:21975807 GO_REF:0000107, MGI:MGI:3821815, MGI:MGI:4412460, RGD:5508737 NCBI chr10:66,188,290...66,221,621
Ensembl chr10:66,189,786...66,313,190
JBrowse link
G Np4 defensin NP-4 precursor IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:75,478,548...75,481,146
Ensembl chr16:75,414,786...75,481,115
JBrowse link
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 ISO
IEA
(PMID:18511497)
GO_REF:0000107
RGD
Ensembl
PMID:18511497 GO_REF:0000107 NCBI chr10:86,683,875...86,690,815
Ensembl chr10:86,683,875...86,690,815
JBrowse link
G Nr1h3 nuclear receptor subfamily 1, group H, member 3 ISO
IEA
(PMID:18511497)
GO_REF:0000107
(MGI:MGI:5009771|PMID:21187453)
RGD
Ensembl
PMID:18511497, PMID:21187453 GO_REF:0000107, MGI:MGI:5009771 NCBI chr 3:80,004,130...80,014,197
Ensembl chr 3:80,004,130...80,012,750
JBrowse link
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 IEA
ISO
GO_REF:0000107
(MGI:MGI:5707586|PMID:18972444)
Ensembl
RGD
PMID:18972444 GO_REF:0000107, MGI:MGI:5707586 NCBI chr 7:30,003,429...30,162,095
Ensembl chr 7:30,003,429...30,162,056
JBrowse link
G Nuggc nuclear GTPase, germinal center associated ISO (PMID:19734146) RGD PMID:19734146 NCBI chr15:49,011,951...49,055,246
Ensembl chr15:49,010,492...49,055,237
JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase IMP RGD PMID:19098112 RGD:9590190 NCBI chr  X:71,540,870...71,585,906
Ensembl chr  X:71,528,988...71,585,908
JBrowse link
G Oprk1 opioid receptor, kappa 1 IEP RGD PMID:9645969 RGD:9831421 NCBI chr 5:13,742,655...13,760,460
Ensembl chr 5:13,744,658...13,760,305
JBrowse link
G P2ry2 purinergic receptor P2Y2 IEP RGD PMID:18689605 RGD:2316659 NCBI chr 1:166,031,228...166,045,423
Ensembl chr 1:166,031,272...166,037,424
JBrowse link
G Pabpn1 poly(A) binding protein, nuclear 1 ISO (MGI:MGI:5795816|PMID:22844456) RGD PMID:22844456 MGI:MGI:5795816 NCBI chr15:33,555,640...33,560,251
Ensembl chr15:33,555,640...33,560,242
JBrowse link
G Paf1 PAF1 homolog, Paf1/RNA polymerase II complex component ISO
ISS
(MGI:MGI:5319608|PMID:17911113)
GO_REF:0000024
RGD
UniProt
PMID:17911113 GO_REF:0000024, MGI:MGI:5319608 NCBI chr 1:85,362,421...85,367,999
Ensembl chr 1:85,362,268...85,368,031
JBrowse link
G Park7 Parkinsonism associated deglycase IEP RGD PMID:23847046 RGD:13462068 NCBI chr 5:167,982,438...168,004,724
Ensembl chr 5:167,982,439...168,004,724
JBrowse link
G Pdcd1lg2 programmed cell death 1 ligand 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:247,562,202...247,629,279
Ensembl chr 1:247,562,202...247,627,193
JBrowse link
G Pdcd4 programmed cell death 4 ISO (MGI:MGI:4438829|PMID:19946272) RGD PMID:19946272 MGI:MGI:4438829 NCBI chr 1:274,616,625...274,648,204
Ensembl chr 1:274,625,224...274,648,204
JBrowse link
G Pde2a phosphodiesterase 2A ISO (PMID:21571906) RGD PMID:21571906 NCBI chr 1:166,534,643...166,626,158
Ensembl chr 1:166,534,643...166,626,158
JBrowse link
G Pde4b phosphodiesterase 4B ISO
IEA
MGI:MGI:2181444 (MGI:MGI:3521611|PMID:15585880)
GO_REF:0000107
RGD
Ensembl
PMID:15585880 GO_REF:0000107, MGI:MGI:3521611 NCBI chr 5:121,759,236...122,136,814
Ensembl chr 5:121,952,977...122,136,814
JBrowse link
G Pde4d phosphodiesterase 4D ISO
IEA
MGI:MGI:2451168|MGI:MGI:3525068 (MGI:MGI:3521611|PMID:15585880)
GO_REF:0000107
RGD
Ensembl
PMID:15585880 GO_REF:0000107, MGI:MGI:3521611 NCBI chr 2:40,219,999...41,468,551
Ensembl chr 2:40,554,146...41,464,264
JBrowse link
G Pf4 platelet factor 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:18,848,549...18,849,258
Ensembl chr14:18,848,549...18,849,258
JBrowse link
G Plaa phospholipase A2, activating protein ISO
ISS
(PMID:28007986)
GO_REF:0000024
RGD
UniProt
PMID:28007986 GO_REF:0000024 NCBI chr 5:113,548,913...113,578,928
Ensembl chr 5:113,548,913...113,578,928
JBrowse link
G Plau plasminogen activator, urokinase IEP RGD PMID:19184369 RGD:7241806 NCBI chr15:3,644,296...3,650,765
Ensembl chr15:3,644,769...3,650,819
JBrowse link
G Plscr1 phospholipid scramblase 1 IEA
ISO
GO_REF:0000107
(PMID:17590392)
Ensembl
RGD
PMID:17590392 GO_REF:0000107 NCBI chr 8:99,625,523...99,645,882
Ensembl chr 8:99,625,545...99,725,217
JBrowse link
G Plscr2 phospholipid scramblase 2 ISO (PMID:17590392) RGD PMID:17590392 NCBI chr 8:99,650,351...99,725,514
Ensembl chr 8:99,625,545...99,725,217
JBrowse link
G Plscr3 phospholipid scramblase 3 ISO (PMID:17590392) RGD PMID:17590392 NCBI chr10:56,452,632...56,458,390
Ensembl chr10:56,453,877...56,458,390
JBrowse link
G Plscr4 phospholipid scramblase 4 ISO (PMID:17590392) RGD PMID:17590392 NCBI chr 8:99,880,073...99,917,733
Ensembl chr 8:99,880,073...99,918,825
JBrowse link
G Ppard peroxisome proliferator-activated receptor delta IDA RGD PMID:15728586 RGD:1580656 NCBI chr20:7,818,289...7,883,482
Ensembl chr20:7,818,289...7,885,333
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha IEP RGD PMID:19853624 RGD:10059687 NCBI chr14:63,095,291...63,190,688
Ensembl chr14:63,095,720...63,187,009
JBrowse link
G Ppbp pro-platelet basic protein IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:18,852,433...18,853,237
Ensembl chr14:18,851,954...18,853,315
JBrowse link
G Prpf8 pre-mRNA processing factor 8 IDA RGD PMID:1345341 RGD:10045884 NCBI chr10:63,635,239...63,658,360
Ensembl chr10:63,635,219...63,658,361
JBrowse link
G Ptger3 prostaglandin E receptor 3 IEP RGD PMID:14636300 RGD:10043359 NCBI chr 2:263,895,093...263,979,682
Ensembl chr 2:263,895,241...263,979,698
JBrowse link
G Pycard PYD and CARD domain containing ISO (PMID:12486103) RGD PMID:12486103 NCBI chr 1:199,438,029...199,439,062
Ensembl chr 1:199,437,832...199,439,210
JBrowse link
G Rara retinoic acid receptor, alpha ISO (MGI:MGI:4411947|PMID:19752193) RGD PMID:19752193 MGI:MGI:4411947 NCBI chr10:86,838,819...86,884,224
Ensembl chr10:86,860,685...86,884,210
JBrowse link
G RatNP-3b defensin RatNP-3 precursor IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:75,528,348...75,530,511
Ensembl chr16:75,497,832...75,530,517
JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit IEP
ISO
IDA
(PMID:25762865)
(PMID:20547752)
RGD PMID:20547752, PMID:25762865, PMID:9918814, PMID:15728586 RGD:2298880, RGD:1580656 NCBI chr 1:220,992,770...221,003,249
Ensembl chr 1:220,992,770...221,003,249
JBrowse link
G Rhoa ras homolog family member A ISO (PMID:19734146) RGD PMID:19734146 NCBI chr 8:117,082,440...117,116,244
Ensembl chr 8:117,106,576...117,116,167
JBrowse link
G Ripk2 receptor-interacting serine-threonine kinase 2 ISO MGI:MGI:2446070|MGI:MGI:2660793 (MGI:MGI:2176422|PMID:11894098), (MGI:MGI:2176424|PMID:11894097) RGD PMID:11894097, PMID:11894098 MGI:MGI:2176422, MGI:MGI:2176424 NCBI chr 5:29,838,713...29,870,390
Ensembl chr 5:29,838,747...29,870,735
JBrowse link
G Sbno2 strawberry notch homolog 2 ISO (MGI:MGI:5660440|PMID:25903009) RGD PMID:25903009 MGI:MGI:5660440 NCBI chr 7:12,471,805...12,515,700
Ensembl chr 7:12,471,824...12,518,654
JBrowse link
G Selenos selenoprotein S ISO
IEA
(PMID:18675776)
GO_REF:0000107
RGD
Ensembl
PMID:18675776 GO_REF:0000107 NCBI chr 1:126,979,579...126,989,344
Ensembl chr 1:126,979,575...126,989,344
JBrowse link
G Serpine1 serpin family E member 1 ISO
IEP
IEA
(PMID:19916862)
GO_REF:0000107
RGD
Ensembl
PMID:19916862, PMID:20060032 GO_REF:0000107, RGD:13208812 NCBI chr12:22,641,104...22,651,482
Ensembl chr12:22,641,104...22,651,482
JBrowse link
G Sgms1 sphingomyelin synthase 1 IEP RGD PMID:12353928 RGD:1302423 NCBI chr 1:250,692,448...250,951,685
Ensembl chr 1:250,691,370...250,951,697
JBrowse link
G Shpk sedoheptulokinase ISO
IBA
(PMID:22682222)
PMID:21873635
(MGI:MGI:5428058|PMID:22682222)
RGD PMID:22682222, PMID:21873635 MGI:MGI:5428058, RGD:13792537 NCBI chr10:59,765,328...59,789,676
Ensembl chr10:59,765,258...59,789,678
JBrowse link
G Sirpa signal-regulatory protein alpha ISO
IEA
(MGI:MGI:3760575|PMID:17954568)
GO_REF:0000107
RGD
Ensembl
PMID:17954568 GO_REF:0000107, MGI:MGI:3760575 NCBI chr 3:122,113,735...122,152,478
Ensembl chr 3:122,114,108...122,152,477
JBrowse link
G Smr3b submaxillary gland androgen regulated protein 3B IDA PMID:9321881 UniProt PMID:9321881 RGD:8553737 NCBI chr14:21,490,216...21,709,077
Ensembl chr14:21,490,217...21,709,084
JBrowse link
G Spon2 spondin 2 ISO MGI:MGI:3026870 (MGI:MGI:2686801|PMID:14691481) RGD PMID:14691481 MGI:MGI:2686801 NCBI chr14:82,815,158...82,824,529
Ensembl chr14:82,818,663...82,824,599
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase IEP RGD PMID:20149623 RGD:2325014 NCBI chr 3:153,547,807...153,595,643
Ensembl chr 3:153,580,861...153,595,642
JBrowse link
G Stap1 signal transducing adaptor family member 1 ISO (MGI:MGI:3831067|PMID:19100238) RGD PMID:19100238 MGI:MGI:3831067 NCBI chr14:23,575,400...23,604,984
Ensembl chr14:23,576,085...23,604,834
JBrowse link
G Star steroidogenic acute regulatory protein IEP RGD PMID:20665543 RGD:4145535 NCBI chr16:71,036,204...71,040,847
Ensembl chr16:71,036,204...71,040,847
JBrowse link
G Stat1 signal transducer and activator of transcription 1 ISO MGI:MGI:1861949 (MGI:MGI:5013875|PMID:21606371) RGD PMID:21606371 MGI:MGI:5013875 NCBI chr 9:54,287,540...54,327,958
Ensembl chr 9:54,287,541...54,484,533
JBrowse link
G Tbxa2r thromboxane A2 receptor IMP RGD PMID:10513923 RGD:11059603 NCBI chr 7:11,253,153...11,259,233
Ensembl chr 7:11,253,180...11,257,977
JBrowse link
G Tfpi tissue factor pathway inhibitor IEP RGD PMID:11816723 RGD:727341 NCBI chr 3:71,852,738...71,902,127
Ensembl chr 3:71,852,744...71,893,618
JBrowse link
G Thpo thrombopoietin IEP RGD PMID:20236022 RGD:11073693 NCBI chr11:82,845,676...82,853,439
Ensembl chr11:83,868,655...83,873,910
Ensembl chr11:83,868,655...83,873,910
JBrowse link
G Ticam1 toll-like receptor adaptor molecule 1 ISO (MGI:MGI:3718934|PMID:17658277) RGD PMID:17658277 MGI:MGI:3718934 NCBI chr 9:10,780,185...10,790,280 JBrowse link
G Ticam2 toll-like receptor adaptor molecule 2 ISO (PMID:19412184), (PMID:22685567) RGD PMID:19412184, PMID:22685567 NCBI chr18:40,555,106...40,572,569
Ensembl chr18:40,555,106...40,572,241
JBrowse link
G Tlr4 toll-like receptor 4 IEP
ISO
RNAcentral:URS000026261D_9606 (PMID:11432859), (PMID:30321456)
MGI:MGI:1860755 (MGI:MGI:1860539|PMID:10880523), (MGI:MGI:2686801|PMID:14691481), (MGI:MGI:4421230|PMID:20051628), (MGI:MGI:5604854|PMID:24740015), (MGI:MGI:6244743|PMID:28096568)
RGD PMID:10880523, PMID:11432859, PMID:14691481, PMID:20051628, PMID:24740015, PMID:28096568, PMID:30321456, PMID:20438866 MGI:MGI:1860539, MGI:MGI:2686801, MGI:MGI:4421230, MGI:MGI:5604854, MGI:MGI:6244743, RGD:7777075 NCBI chr 5:82,587,424...82,601,056
Ensembl chr 5:82,587,420...82,601,052
JBrowse link
G Tlr5 toll-like receptor 5 IEP RGD PMID:21308757 RGD:5129495 NCBI chr13:101,364,784...101,385,764
Ensembl chr13:101,381,510...101,385,764
JBrowse link
G Tlr9 toll-like receptor 9 IEP RGD PMID:21308757, PMID:20655116 RGD:5129495, RGD:5130179 NCBI chr 8:114,916,122...114,920,171
Ensembl chr 8:114,916,122...114,920,171
JBrowse link
G Tnf tumor necrosis factor IEP
IMP
ISO
(MGI:MGI:3828894|PMID:19047410), (MGI:MGI:4437182|PMID:20060382), (MGI:MGI:5013875|PMID:21606371), (MGI:MGI:5543352|PMID:23610142) RGD PMID:19047410, PMID:20060382, PMID:21606371, PMID:23610142, PMID:15602748, PMID:10959811, PMID:17964727 MGI:MGI:3828894, MGI:MGI:4437182, MGI:MGI:5013875, MGI:MGI:5543352, RGD:1582142, RGD:14994703, RGD:14995441 NCBI chr20:5,189,382...5,192,000
Ensembl chr20:5,189,390...5,192,000
JBrowse link
G Tnfaip3 TNF alpha induced protein 3 ISO (PMID:19912257), (PMID:21127049), (PMID:21220427) RGD PMID:19912257, PMID:21127049, PMID:21220427 NCBI chr 1:14,401,103...14,416,369
Ensembl chr 1:14,402,913...14,412,807
JBrowse link
G Tnfrsf1b TNF receptor superfamily member 1B ISO (PMID:22480688) RGD PMID:22480688 NCBI chr 5:163,136,390...163,167,299
Ensembl chr 5:163,136,390...163,167,299
JBrowse link
G Tnfsf4 TNF superfamily member 4 ISO (PMID:20844189) RGD PMID:20844189 NCBI chr13:79,269,973...79,293,775
Ensembl chr13:79,269,973...79,293,778
JBrowse link
G Tnip2 TNFAIP3 interacting protein 2 ISO (MGI:MGI:3656197|PMID:16633345) RGD PMID:16633345 MGI:MGI:3656197 NCBI chr14:81,487,934...81,505,889
Ensembl chr14:81,488,008...81,504,686
JBrowse link
G Tnip3 TNFAIP3 interacting protein 3 ISO (PMID:17088249) RGD PMID:17088249 NCBI chr 4:96,386,207...96,490,517
Ensembl chr 4:96,449,351...96,492,871
JBrowse link
G Traf6 TNF receptor associated factor 6 ISO (PMID:23776175) RGD PMID:23776175 NCBI chr 3:91,252,829...91,271,607
Ensembl chr 3:91,252,829...91,271,607
JBrowse link
G Trim41 tripartite motif-containing 41 ISO (PMID:27812135) RGD PMID:27812135 NCBI chr10:34,155,515...34,166,599
Ensembl chr10:34,155,515...34,166,599
JBrowse link
G Tspo translocator protein IEP RGD PMID:14678758 RGD:2317158 NCBI chr 7:124,460,358...124,470,610
Ensembl chr 7:124,460,358...124,470,609
JBrowse link
G Upf1 UPF1, RNA helicase and ATPase ISO (PMID:26255671) RGD PMID:26255671 NCBI chr16:20,824,888...20,845,632
Ensembl chr16:20,824,864...20,845,243
JBrowse link
G Vim vimentin ISS
ISO
IEA
GO_REF:0000024
(PMID:27812135)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:27812135 GO_REF:0000024, GO_REF:0000107 NCBI chr17:80,882,715...80,891,200
Ensembl chr17:80,882,666...80,891,212
JBrowse link
G Vldlr very low density lipoprotein receptor IEP RGD PMID:16376325 RGD:1625574 NCBI chr 1:245,236,819...245,273,688
Ensembl chr 1:245,237,736...245,269,205
JBrowse link
G Vwf von Willebrand factor IEP RGD PMID:17708840 RGD:11079229 NCBI chr 4:158,085,059...158,219,525
Ensembl chr 4:158,088,505...158,219,523
JBrowse link
G Wnt5a Wnt family member 5A IEA
ISO
GO_REF:0000107
(PMID:18174455)
Ensembl
RGD
PMID:18174455 GO_REF:0000107 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
G Xbp1 X-box binding protein 1 ISO
ISS
(PMID:11460154)
GO_REF:0000024
(MGI:MGI:5605956|PMID:12612580)
RGD
UniProt
PMID:11460154, PMID:12612580 GO_REF:0000024, MGI:MGI:5605956 NCBI chr14:85,753,736...85,758,820
Ensembl chr14:85,753,760...85,758,145
JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A ISS
ISO
GO_REF:0000024
(MGI:MGI:3842851|PMID:19322177), (MGI:MGI:5142149|PMID:21616078), (MGI:MGI:5706859|PMID:26000482), (MGI:MGI:5751631|PMID:26255671)
(PMID:18178554), (PMID:19909337), (PMID:22055188), (PMID:25861989)
UniProt
RGD
PMID:18178554, PMID:19322177, PMID:19909337, PMID:21616078, PMID:22055188, PMID:25861989, PMID:26000482, PMID:26255671 GO_REF:0000024, MGI:MGI:3842851, MGI:MGI:5142149, MGI:MGI:5706859, MGI:MGI:5751631 NCBI chr 5:143,111,342...143,120,131
Ensembl chr 5:143,111,074...143,120,165
JBrowse link
G Zfp36 zinc finger protein 36 IEA
ISO
ISS
GO_REF:0000107
(MGI:MGI:4457258|PMID:10330172), (MGI:MGI:5784995|PMID:11533235), (MGI:MGI:5784999|PMID:9703499), (MGI:MGI:5795816|PMID:22844456)
(PMID:14679154), (PMID:14766228), (PMID:15187101)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:9703499, PMID:10330172, PMID:11533235, PMID:14679154, PMID:14766228, PMID:15187101, PMID:22844456 GO_REF:0000024, GO_REF:0000107, MGI:MGI:4457258, MGI:MGI:5784995, MGI:MGI:5784999, MGI:MGI:5795816 NCBI chr 1:85,380,088...85,382,565
Ensembl chr 1:85,380,088...85,382,569
JBrowse link
G Zfp709 zinc finger protein 709 IDA PMID:17374454 UniProt PMID:17374454 RGD:8553966 NCBI chr16:19,632,954...19,643,956
Ensembl chr16:19,634,134...19,643,236
JBrowse link
lipopolysaccharide-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 ISO (MGI:MGI:5604854|PMID:24740015) RGD PMID:24740015 MGI:MGI:5604854 NCBI chr 6:137,218,398...137,239,970
Ensembl chr 6:137,218,376...137,236,258
JBrowse link
G Bcl10 BCL10, immune signaling adaptor ISS
ISO
GO_REF:0000024
(PMID:16831874)
UniProt
RGD
PMID:16831874 GO_REF:0000024 NCBI chr 2:251,805,392...251,814,957
Ensembl chr 2:251,805,392...251,814,957
JBrowse link
G Bpi bactericidal/permeability-increasing protein IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:154,741,627...154,768,584
Ensembl chr 3:154,741,631...154,768,640
JBrowse link
G Ccl2 C-C motif chemokine ligand 2 ISO (PMID:21147091) RGD PMID:21147091 NCBI chr10:69,412,065...69,413,863
Ensembl chr10:69,412,017...69,413,870
JBrowse link
G Ccl3 C-C motif chemokine ligand 3 ISO
ISS
(PMID:21147091)
GO_REF:0000024
RGD
UniProt
PMID:21147091 GO_REF:0000024 NCBI chr10:70,869,516...70,871,066
Ensembl chr10:70,869,513...70,871,066
JBrowse link
G Ccl5 C-C motif chemokine ligand 5 ISO
IEA
(PMID:21147091)
GO_REF:0000107
RGD
Ensembl
PMID:21147091 GO_REF:0000107 NCBI chr10:70,739,764...70,744,303
Ensembl chr10:70,739,800...70,744,315
JBrowse link
G Cd14 CD14 molecule ISO
IBA
ISS
(MGI:MGI:5645195|PMID:24380872)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:24380872, PMID:21873635 GO_REF:0000024, MGI:MGI:5645195, RGD:13792537 NCBI chr18:29,560,341...29,562,290
Ensembl chr18:29,560,365...29,562,153
JBrowse link
G Cd6 Cd6 molecule ISO (PMID:17601777) RGD PMID:17601777 NCBI chr 1:226,848,399...226,887,259
Ensembl chr 1:226,848,403...226,887,156
JBrowse link
G Il18 interleukin 18 IEA
ISO
GO_REF:0000107
(PMID:21147091)
Ensembl
RGD
PMID:21147091 GO_REF:0000107 NCBI chr 8:55,009,666...55,016,286
Ensembl chr 8:54,993,859...55,016,299
JBrowse link
G Il1b interleukin 1 beta IEA
ISO
GO_REF:0000107
(PMID:21147091)
Ensembl
RGD
PMID:21147091 GO_REF:0000107 NCBI chr 3:121,876,256...121,882,637
Ensembl chr 3:121,876,263...121,882,726
JBrowse link
G Irak1 interleukin-1 receptor-associated kinase 1 ISO (PMID:10383454)
(MGI:MGI:2178646|PMID:10549626), (MGI:MGI:2669022|PMID:12855817)
RGD PMID:10383454, PMID:10549626, PMID:12855817 MGI:MGI:2178646, MGI:MGI:2669022 NCBI chr  X:156,716,469...156,726,367
Ensembl chr  X:156,716,604...156,725,977
JBrowse link
G Irak2 interleukin-1 receptor-associated kinase 2 ISO (MGI:MGI:3046371|PMID:15082713) RGD PMID:15082713 MGI:MGI:3046371 NCBI chr 4:145,594,575...145,651,066
Ensembl chr 4:145,594,575...145,651,053
JBrowse link
G Irf3 interferon regulatory factor 3 ISO (MGI:MGI:2669022|PMID:12855817), (MGI:MGI:2670551|PMID:12872135) RGD PMID:12855817, PMID:12872135 MGI:MGI:2669022, MGI:MGI:2670551 NCBI chr 1:100,992,244...100,997,202
Ensembl chr 1:100,992,405...100,997,198
JBrowse link
G Lbp lipopolysaccharide binding protein IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:11739189), (PMID:8409400)
Ensembl
RGD
PMID:8409400, PMID:11739189, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 3:154,786,232...154,812,910
Ensembl chr 3:154,786,215...154,813,464
JBrowse link
G Ly96 lymphocyte antigen 96 ISO (MGI:MGI:5645195|PMID:24380872) RGD PMID:24380872 MGI:MGI:5645195 NCBI chr 5:1,972,212...1,989,448 JBrowse link
G Lyn LYN proto-oncogene, Src family tyrosine kinase ISO
ISS
(MGI:MGI:4456928|PMID:20385881)
GO_REF:0000024
RGD
UniProt
PMID:20385881 GO_REF:0000024, MGI:MGI:4456928 NCBI chr 5:16,526,058...16,642,648
Ensembl chr 5:16,526,058...16,642,648
JBrowse link
G Malt1 MALT1 paracaspase ISO (MGI:MGI:3694380|PMID:16831874) RGD PMID:16831874 MGI:MGI:3694380 NCBI chr18:61,108,712...61,162,446
Ensembl chr18:61,109,069...61,162,445
JBrowse link
G Mapk1 mitogen activated protein kinase 1 ISO (MGI:MGI:2670551|PMID:12872135) RGD PMID:12872135 MGI:MGI:2670551 NCBI chr11:88,203,863...88,273,301
Ensembl chr11:88,211,599...88,273,254
JBrowse link
G Mapk14 mitogen activated protein kinase 14 ISO
IEA
(MGI:MGI:2670551|PMID:12872135)
GO_REF:0000107
RGD
Ensembl
PMID:12872135 GO_REF:0000107, MGI:MGI:2670551 NCBI chr20:5,933,290...5,995,137
Ensembl chr20:5,933,303...5,995,137
JBrowse link
G Mapk3 mitogen activated protein kinase 3 ISO (MGI:MGI:2670551|PMID:12872135) RGD PMID:12872135 MGI:MGI:2670551 NCBI chr 1:198,192,773...198,198,975
Ensembl chr 1:198,192,773...198,198,975
JBrowse link
G Mtdh metadherin ISO (PMID:19740331) RGD PMID:19740331 NCBI chr 7:72,771,018...72,830,599
Ensembl chr 7:72,772,440...72,827,908
JBrowse link
G Myd88 MYD88, innate immune signal transduction adaptor ISO MGI:MGI:2385681 (MGI:MGI:2669022|PMID:12855817) RGD PMID:12855817 MGI:MGI:2669022 NCBI chr 8:128,022,512...128,027,462
Ensembl chr 8:128,022,473...128,026,841
JBrowse link
G Nfkbia NFKB inhibitor alpha ISO (MGI:MGI:2670551|PMID:12872135), (MGI:MGI:3775161|PMID:18261938) RGD PMID:12872135, PMID:18261938 MGI:MGI:2670551, MGI:MGI:3775161 NCBI chr 6:76,267,227...76,270,457
Ensembl chr 6:76,267,228...76,270,457
JBrowse link
G Nos3 nitric oxide synthase 3 ISO
IEA
MGI:MGI:1857229 (MGI:MGI:3576391|PMID:15647265)
GO_REF:0000107
RGD
Ensembl
PMID:15647265 GO_REF:0000107, MGI:MGI:3576391 NCBI chr 4:7,321,908...7,342,404
Ensembl chr 4:7,320,668...7,342,410
JBrowse link
G Prkce protein kinase C, epsilon ISS
ISO
GO_REF:0000024
MGI:MGI:3609215 (MGI:MGI:3609210|PMID:11696589), (MGI:MGI:3652658|PMID:16757566)
UniProt
RGD
PMID:11696589, PMID:16757566 GO_REF:0000024, MGI:MGI:3609210, MGI:MGI:3652658 NCBI chr 6:9,483,400...9,973,396
Ensembl chr 6:9,790,422...9,973,396
JBrowse link
G Ptafr platelet-activating factor receptor IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 5:150,746,284...150,775,675
Ensembl chr 5:150,754,021...150,775,672
JBrowse link
G Ptpn22 protein tyrosine phosphatase, non-receptor type 22 ISO (PMID:23991106) RGD PMID:23991106 NCBI chr 2:206,342,066...206,390,348
Ensembl chr 2:206,342,066...206,390,348
JBrowse link
G Ripk2 receptor-interacting serine-threonine kinase 2 ISO MGI:MGI:2660793 (MGI:MGI:2176422|PMID:11894098) RGD PMID:11894098 MGI:MGI:2176422 NCBI chr 5:29,838,713...29,870,390
Ensembl chr 5:29,838,747...29,870,735
JBrowse link
G Scarb1 scavenger receptor class B, member 1 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr12:36,694,952...36,761,445
Ensembl chr12:36,694,960...36,761,455
JBrowse link
G Stat1 signal transducer and activator of transcription 1 ISO (MGI:MGI:2670551|PMID:12872135) RGD PMID:12872135 MGI:MGI:2670551 NCBI chr 9:54,287,540...54,327,958
Ensembl chr 9:54,287,541...54,484,533
JBrowse link
G Tgfb1 transforming growth factor, beta 1 ISO
ISS
(PMID:21147091)
GO_REF:0000024
RGD
UniProt
PMID:21147091 GO_REF:0000024 NCBI chr 1:82,480,875...82,497,196
Ensembl chr 1:82,480,195...82,497,199
JBrowse link
G Ticam1 toll-like receptor adaptor molecule 1 ISO MGI:MGI:2679794|MGI:MGI:3029019 (MGI:MGI:2669022|PMID:12855817), (MGI:MGI:2670551|PMID:12872135) RGD PMID:12855817, PMID:12872135 MGI:MGI:2669022, MGI:MGI:2670551 NCBI chr 9:10,780,185...10,790,280 JBrowse link
G Tlr4 toll-like receptor 4 NOT ISO
IEA
UniProtKB:O95711|UniProtKB:Q9Y6Y9 (PMID:10880523)
MGI:MGI:1194924|MGI:MGI:1321404|MGI:MGI:1341909 (MGI:MGI:1860539|PMID:10880523), (MGI:MGI:5913054|PMID:28098138)
GO_REF:0000107
RGD
Ensembl
PMID:10880523, PMID:28098138 GO_REF:0000107, MGI:MGI:1860539, MGI:MGI:5913054 NCBI chr 5:82,587,424...82,601,056
Ensembl chr 5:82,587,420...82,601,052
JBrowse link
G Tnf tumor necrosis factor ISO (PMID:21147091) RGD PMID:21147091 NCBI chr20:5,189,382...5,192,000
Ensembl chr20:5,189,390...5,192,000
JBrowse link
negative regulation of lipopolysaccharide-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cactin cactin, spliceosome C complex subunit ISO (PMID:20829348) RGD PMID:20829348 NCBI chr 7:11,258,526...11,266,509
Ensembl chr 7:11,261,201...11,266,630
JBrowse link
G Ltf lactotransferrin ISO (PMID:20345905) RGD PMID:20345905 NCBI chr 8:119,290,416...119,313,261
Ensembl chr 8:119,290,416...119,313,261
JBrowse link
G Nfkbil1 NFKB inhibitor like 1 ISO
ISS
(PMID:20829348)
GO_REF:0000024
RGD
UniProt
PMID:20829348 GO_REF:0000024 NCBI chr20:4,823,590...4,839,202
Ensembl chr20:4,822,935...4,839,202
JBrowse link
G Nlrp1b NLR family, pyrin domain containing 1B ISO (PMID:11821383) RGD PMID:11821383 NCBI chr10:57,755,957...57,847,867 JBrowse link
G Prdm1 PR/SET domain 1 ISO (MGI:MGI:3826899|PMID:18845144) RGD PMID:18845144 MGI:MGI:3826899 NCBI chr20:49,464,921...49,556,623
Ensembl chr20:49,464,919...49,556,518
JBrowse link
G Prdx2 peroxiredoxin 2 ISO
IEA
MGI:MGI:2668456 (MGI:MGI:3758374|PMID:17325201)
GO_REF:0000107
RGD
Ensembl
PMID:17325201 GO_REF:0000107, MGI:MGI:3758374 NCBI chr19:26,084,816...26,090,095
Ensembl chr19:26,084,903...26,090,094
JBrowse link
G Trib1 tribbles pseudokinase 1 ISO (PMID:17452330) RGD PMID:17452330 NCBI chr 7:99,954,492...99,961,026
Ensembl chr 7:99,954,492...99,961,026
JBrowse link
positive regulation of lipopolysaccharide-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp6 bone morphogenetic protein 6 ISO (MGI:MGI:4352622|PMID:19252488) RGD PMID:19252488 MGI:MGI:4352622 NCBI chr17:26,955,142...27,112,820
Ensembl chr17:26,955,142...27,112,820
JBrowse link
G Cd180 CD180 molecule ISO
IBA
UniProtKB:O95711 (PMID:10880523)
PMID:21873635
MGI:MGI:1321404|MGI:MGI:96824 (MGI:MGI:1860539|PMID:10880523)
RGD PMID:10880523, PMID:21873635 MGI:MGI:1860539, RGD:13792537 NCBI chr 2:32,820,275...32,833,223
Ensembl chr 2:32,820,322...32,833,125
JBrowse link
G Ly86 lymphocyte antigen 86 ISO MGI:MGI:1194924|MGI:MGI:96824 (MGI:MGI:1860539|PMID:10880523)
UniProtKB:Q99467 (PMID:10880523)
RGD PMID:10880523 MGI:MGI:1860539 NCBI chr17:28,104,535...28,191,447
Ensembl chr17:28,104,589...28,191,436
JBrowse link
G Ly96 lymphocyte antigen 96 ISO MGI:MGI:1194924|MGI:MGI:96824 (MGI:MGI:1860539|PMID:10880523) RGD PMID:10880523 MGI:MGI:1860539 NCBI chr 5:1,972,212...1,989,448 JBrowse link
G Mif macrophage migration inhibitory factor ISO (MGI:MGI:2156302|PMID:11756671) RGD PMID:11756671 MGI:MGI:2156302 NCBI chr20:13,715,219...13,732,980
Ensembl chr20:13,732,198...13,732,859
JBrowse link
G Prkca protein kinase C, alpha IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:9830023)
Ensembl
UniProt
RGD
PMID:9830023 GO_REF:0000024, GO_REF:0000107 NCBI chr10:96,186,509...96,585,168
Ensembl chr10:96,191,133...96,584,947
JBrowse link
G Sash1 SAM and SH3 domain containing 1 ISO (PMID:23776175) RGD PMID:23776175 NCBI chr 1:2,782,905...2,950,749
Ensembl chr 1:2,782,864...2,846,200
JBrowse link
G Scimp SLP adaptor and CSK interacting membrane protein ISO (MGI:MGI:5913054|PMID:28098138) RGD PMID:28098138 MGI:MGI:5913054 NCBI chr10:57,415,429...57,436,412
Ensembl chr10:57,415,832...57,436,368
JBrowse link
G Traf6 TNF receptor associated factor 6 ISO (MGI:MGI:1335941|PMID:10215628) RGD PMID:10215628 MGI:MGI:1335941 NCBI chr 3:91,252,829...91,271,607
Ensembl chr 3:91,252,829...91,271,607
JBrowse link
regulation of lipopolysaccharide-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd55 CD55 molecule (Cromer blood group) ISO (PMID:12731067) RGD PMID:12731067 NCBI chr13:47,125,156...47,153,557
Ensembl chr13:47,126,741...47,154,292
JBrowse link
G Cd84 CD84 molecule ISO (MGI:MGI:5700297|PMID:20628063) RGD PMID:20628063 MGI:MGI:5700297 NCBI chr13:90,241,369...90,283,625
Ensembl chr13:90,244,681...90,277,865
JBrowse link
G Cx3cl1 C-X3-C motif chemokine ligand 1 IEA
ISO
GO_REF:0000107
(PMID:10652441)
Ensembl
RGD
PMID:10652441 GO_REF:0000107 NCBI chr19:10,644,267...10,654,861
Ensembl chr19:10,644,244...10,653,800
JBrowse link
G Trim5 tripartite motif-containing 5 ISO (PMID:21512573) RGD PMID:21512573 NCBI chr 1:169,446,774...169,463,760
Ensembl chr 1:169,446,805...169,534,896
JBrowse link
G Tut4 terminal uridylyl transferase 4 ISO (MGI:MGI:3624478|PMID:16643855) RGD PMID:16643855 MGI:MGI:3624478 NCBI chr 5:128,063,880...128,168,726
Ensembl chr 5:128,083,118...128,168,207
JBrowse link
tolerance induction to lipopolysaccharide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acod1 aconitate decarboxylase 1 ISO (PMID:23609450)
(MGI:MGI:5490396|PMID:23609450)
RGD PMID:23609450 MGI:MGI:5490396 NCBI chr15:93,612,968...93,622,322
Ensembl chr15:93,612,971...93,622,358
JBrowse link
G Tnfaip3 TNF alpha induced protein 3 ISO (PMID:21220427) RGD PMID:21220427 NCBI chr 1:14,401,103...14,416,369
Ensembl chr 1:14,402,913...14,412,807
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20014
    cellular process 18788
      cellular response to stimulus 8906
        cellular response to biotic stimulus 344
          cellular response to molecule of bacterial origin 317
            cellular response to lipopolysaccharide 306
              lipopolysaccharide-mediated signaling pathway + 56
              tolerance induction to lipopolysaccharide 2
Path 2
Term Annotations click to browse term
  biological_process 20014
    response to stimulus 10568
      response to external stimulus 3214
        response to external biotic stimulus 1706
          response to other organism 1702
            response to bacterium 1042
              response to molecule of bacterial origin 539
                cellular response to molecule of bacterial origin 317
                  cellular response to lipopolysaccharide 306
                    lipopolysaccharide-mediated signaling pathway + 56
                    tolerance induction to lipopolysaccharide 2
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.