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ONTOLOGY REPORT - ANNOTATIONS

Term:cellular response to molecule of bacterial origin
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Accession:GO:0071219 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by molecules of bacterial origin such as peptides derived from bacterial flagellin.
Synonyms:exact_synonym: cellular response to bacteria associated molecule;   cellular response to bacterial associated molecule;   cellular response to bacterium associated molecule


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cellular response to molecule of bacterial origin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACOD1 aconitate decarboxylase 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr13:76,948,511...76,958,638
Ensembl chr13:76,948,511...76,958,638 		JBrowse link
G AHR aryl hydrocarbon receptor involved_in IDA (PMID:29454749) UniProt PMID:29454749 NCBI chr 7:17,298,652...17,346,147
Ensembl chr 7:16,916,359...17,346,152 		JBrowse link
G CYRIB CYFIP related Rac1 interactor B involved_in IEA
IMP		 (PMID:31285585) Ensembl
UniProt		 PMID:31285585 GO_REF:0000107 NCBI chr 8:129,839,593...130,017,129
Ensembl chr 8:129,839,593...130,017,504 		JBrowse link
G FCGR2B Fc gamma receptor IIb involved_in
acts_upstream_of_or_within		 ISS
ISO		 (PMID:26683154)
(PMID:12385742)		 ARUK-UCL
MGI		 PMID:12385742 PMID:26683154 NCBI chr 1:161,647,243...161,678,654
Ensembl chr 1:161,663,143...161,678,654 		JBrowse link
G FZD5 frizzled class receptor 5 involved_in IDA (PMID:16601243) BHF-UCL PMID:16601243 NCBI chr 2:207,762,598...207,769,906
Ensembl chr 2:207,762,598...207,769,906 		JBrowse link
G NCAM1 neural cell adhesion molecule 1 ISO RGD PMID:19853610 RGD:2325979 NCBI chr11:112,961,420...113,278,436
Ensembl chr11:112,961,275...113,278,436 		JBrowse link
G TNF tumor necrosis factor involved_in ISO
IEA		 streptococcal cell wall RGD
Ensembl		 PMID:1580332 GO_REF:0000107 RGD:38508902 NCBI chr 6:31,575,565...31,578,336
Ensembl chr 6:31,575,565...31,578,336 		JBrowse link
G WNT5A Wnt family member 5A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:55,465,715...55,505,263
Ensembl chr 3:55,465,715...55,490,539 		JBrowse link
cellular response to bacterial lipopeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD36 CD36 molecule (CD36 blood group) involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15690042) Ensembl
MGI		 PMID:15690042 GO_REF:0000107 NCBI chr 7:80,602,207...80,679,274
Ensembl chr 7:80,369,575...80,679,277 		JBrowse link
G MIR19A microRNA 19a involved_in IDA (PMID:22105995) ARUK-UCL PMID:22105995 NCBI chr13:91,350,891...91,350,972
Ensembl chr13:91,350,891...91,350,972 		JBrowse link
G MIR19B1 microRNA 19b-1 involved_in IDA (PMID:22105995) ARUK-UCL PMID:22105995 NCBI chr13:91,351,192...91,351,278
Ensembl chr13:91,351,192...91,351,278 		JBrowse link
G MIR19B2 microRNA 19b-2 involved_in IDA (PMID:22105995) ARUK-UCL PMID:22105995 NCBI chr  X:134,169,671...134,169,766
Ensembl chr  X:134,169,671...134,169,766 		JBrowse link
G TIRAP TIR domain containing adaptor protein involved_in
acts_upstream_of_or_within		 ISS
ISO		 (PMID:15690042) BHF-UCL
MGI		 PMID:15690042 GO_REF:0000024 NCBI chr11:126,283,093...126,294,933
Ensembl chr11:126,282,497...126,298,845 		JBrowse link
G TLR10 toll like receptor 10 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 4:38,772,238...38,782,990
Ensembl chr 4:38,772,238...38,782,990 		JBrowse link
G TLR2 toll like receptor 2 involved_in
acts_upstream_of_or_within		 TAS
ISO		 (PMID:15356140)
(PMID:15690042)		 BHF-UCL
MGI		 PMID:15356140 PMID:15690042 NCBI chr 4:153,684,280...153,710,637
Ensembl chr 4:153,684,070...153,706,260 		JBrowse link
cellular response to diacyl bacterial lipopeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD14 CD14 molecule involved_in IDA (PMID:16880211) UniProt PMID:16880211 NCBI chr 5:140,631,732...140,633,701
Ensembl chr 5:140,631,728...140,633,700 		JBrowse link
G CD36 CD36 molecule (CD36 blood group) involved_in IDA
ISS		 (PMID:16880211) UniProt PMID:16880211 GO_REF:0000024 NCBI chr 7:80,602,207...80,679,274
Ensembl chr 7:80,369,575...80,679,277 		JBrowse link
G MIR105-1 microRNA 105-1 involved_in IMP (PMID:19509287) ARUK-UCL PMID:19509287 NCBI chr  X:152,392,219...152,392,299
Ensembl chr  X:152,392,219...152,392,299 		JBrowse link
G MIR105-2 microRNA 105-2 involved_in IMP (PMID:19509287) ARUK-UCL PMID:19509287 NCBI chr  X:152,394,412...152,394,492
Ensembl chr  X:152,394,412...152,394,492 		JBrowse link
G TLR2 toll like receptor 2 acts_upstream_of_or_within
involved_in		 IDA (PMID:19931471)
(PMID:16880211)		 MGI
UniProt		 PMID:16880211 PMID:19931471 NCBI chr 4:153,684,280...153,710,637
Ensembl chr 4:153,684,070...153,706,260 		JBrowse link
G TLR6 toll like receptor 6 involved_in
acts_upstream_of_or_within		 IDA
IEA
IBA		 (PMID:16880211)
(PMID:19931471)		 UniProt
TreeGrafter
GO_Central
MGI		 PMID:16880211 PMID:19931471 GO_REF:0000033 GO_REF:0000118 NCBI chr 4:38,822,897...38,868,390
Ensembl chr 4:38,822,897...38,856,817 		JBrowse link
cellular response to lipopolysaccharide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA1 ATP binding cassette subfamily A member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:104,781,006...104,928,155
Ensembl chr 9:104,781,006...104,928,155 		JBrowse link
G ABCB1 ATP binding cassette subfamily B member 1 ISO RGD PMID:20300455 RGD:39456124 NCBI chr 7:87,503,017...87,713,295
Ensembl chr 7:87,503,017...87,713,323 		JBrowse link
G ABCC2 ATP binding cassette subfamily C member 2 ISO RGD PMID:20702406 RGD:11081005 NCBI chr10:99,782,640...99,852,594
Ensembl chr10:99,782,640...99,852,594 		JBrowse link
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8806812) Ensembl
MGI		 PMID:8806812 GO_REF:0000107 NCBI chr 9:130,713,043...130,887,675
Ensembl chr 9:130,713,043...130,887,675 		JBrowse link
G ACOD1 aconitate decarboxylase 1 involved_in IDA (PMID:23609450), (PMID:23610393), (PMID:35662396) UniProt PMID:23609450 PMID:23610393 PMID:35662396 NCBI chr13:76,948,511...76,958,638
Ensembl chr13:76,948,511...76,958,638 		JBrowse link
G ADAM9 ADAM metallopeptidase domain 9 involved_in IMP (PMID:22480688) BHF-UCL PMID:22480688 NCBI chr 8:38,996,973...39,105,261
Ensembl chr 8:38,996,754...39,105,445 		JBrowse link
G ADAMTS13 ADAM metallopeptidase with thrombospondin type 1 motif 13 involved_in ISO
IEA		 RGD
Ensembl		 PMID:22871409 GO_REF:0000107 RGD:7207038 NCBI chr 9:133,414,337...133,459,386
Ensembl chr 9:133,414,358...133,459,402 		JBrowse link
G AICDA activation induced cytidine deaminase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18762567) Ensembl
MGI		 PMID:18762567 GO_REF:0000107 NCBI chr12:8,602,170...8,612,859
Ensembl chr12:8,602,155...8,613,242 		JBrowse link
G AIF1 allograft inflammatory factor 1 ISO RGD PMID:18717813 RGD:2313015 NCBI chr 6:31,615,234...31,617,015
Ensembl chr 6:31,615,217...31,617,021 		JBrowse link
G AKAP8 A-kinase anchoring protein 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:15,353,385...15,379,787
Ensembl chr19:15,353,385...15,379,815 		JBrowse link
G ANKRD1 ankyrin repeat domain 1 involved_in IEA
IDA		 (PMID:7730328) Ensembl
BHF-UCL		 PMID:7730328 GO_REF:0000107 NCBI chr10:90,912,096...90,921,087
Ensembl chr10:90,912,096...90,921,087 		JBrowse link
G ARG1 arginase 1 ISO RGD PMID:9013624 RGD:4144055 NCBI chr 6:131,573,226...131,584,329
Ensembl chr 6:131,470,832...131,584,332 		JBrowse link
G ARG2 arginase 2 ISO RGD PMID:11250887 RGD:4144048 NCBI chr14:67,619,920...67,651,708
Ensembl chr14:67,619,920...67,651,708 		JBrowse link
G ARID5A AT-rich interaction domain 5A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:96,536,752...96,552,638
Ensembl chr 2:96,536,743...96,552,634 		JBrowse link
G ASS1 argininosuccinate synthase 1 involved_in ISO
IEA		 alveolar macrophages RGD
Ensembl		 PMID:9879717 GO_REF:0000107 RGD:4139906 NCBI chr 9:130,444,707...130,501,274
Ensembl chr 9:130,444,961...130,501,274 		JBrowse link
G AXL AXL receptor tyrosine kinase involved_in IDA (PMID:19657094) UniProt PMID:19657094 NCBI chr19:41,219,223...41,261,766
Ensembl chr19:41,219,223...41,261,766 		JBrowse link
G B2M beta-2-microglobulin involved_in IDA (PMID:23144825) UniProt PMID:23144825 NCBI chr15:44,711,517...44,718,145
Ensembl chr15:44,711,358...44,718,851 		JBrowse link
G BCL10 BCL10 immune signaling adaptor involved_in IEP (PMID:16831874) UniProt PMID:16831874 NCBI chr 1:85,265,776...85,276,632
Ensembl chr 1:85,265,776...85,276,632 		JBrowse link
G BCR BCR activator of RhoGEF and GTPase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7889565) Ensembl
MGI		 PMID:7889565 GO_REF:0000107 NCBI chr22:23,180,509...23,318,037
Ensembl chr22:23,179,704...23,318,037 		JBrowse link
G BYSL bystin like ISO RGD PMID:15305856 RGD:2316201 NCBI chr 6:41,908,759...41,933,046
Ensembl chr 6:41,921,499...41,933,046 		JBrowse link
G CACTIN cactin, spliceosome C complex subunit involved_in IDA (PMID:20829348) UniProt PMID:20829348 NCBI chr19:3,610,645...3,626,790
Ensembl chr19:3,610,645...3,626,815 		JBrowse link
G CAMP cathelicidin antimicrobial peptide involved_in ISO
IEA		 RGD
Ensembl		 PMID:19879657 GO_REF:0000107 RGD:2316237 NCBI chr 3:48,223,495...48,225,485
Ensembl chr 3:48,223,347...48,225,491 		JBrowse link
G CAPN2 calpain 2 involved_in ISO
IEA		 RGD
Ensembl		 PMID:23390485 GO_REF:0000107 RGD:13792657 NCBI chr 1:223,701,597...223,776,018
Ensembl chr 1:223,701,593...223,776,018 		JBrowse link
G CARD16 caspase recruitment domain family member 16 involved_in IDA (PMID:15383541) UniProt PMID:15383541 NCBI chr11:105,041,563...105,045,335
Ensembl chr11:105,041,326...105,101,431 		JBrowse link
G CARD17P caspase recruitment domain family member 17, pseudogene involved_in IDA (PMID:15383541) UniProt PMID:15383541 NCBI chr11:105,080,453...105,101,459
Ensembl chr11:105,092,486...105,101,414 		JBrowse link
G CASP1 caspase 1 involved_in IMP
IDA		 (PMID:11536016)
(PMID:22464733)		 UniProt PMID:11536016 PMID:22464733 NCBI chr11:105,025,443...105,036,686
Ensembl chr11:105,025,397...105,035,250 		JBrowse link
G CASP7 caspase 7 involved_in IDA (PMID:22464733) UniProt PMID:22464733 NCBI chr10:113,679,194...113,730,909
Ensembl chr10:113,679,162...113,730,907 		JBrowse link
G CCL2 C-C motif chemokine ligand 2 involved_in ISO
ISS		 RGD
BHF-UCL		 PMID:8921263 GO_REF:0000024 RGD:8549522 NCBI chr17:34,255,285...34,257,203
Ensembl chr17:34,255,274...34,257,208 		JBrowse link
G CCL20 C-C motif chemokine ligand 20 ISO RGD PMID:15618187 RGD:7483631 NCBI chr 2:227,813,842...227,817,556
Ensembl chr 2:227,805,739...227,817,564 		JBrowse link
G CCL5 C-C motif chemokine ligand 5 ISO RGD PMID:20578038 RGD:4889899 NCBI chr17:35,871,491...35,880,360
Ensembl chr17:35,871,491...35,880,793 		JBrowse link
G CCR5 C-C motif chemokine receptor 5 involved_in IEP (PMID:10679098) UniProt PMID:10679098 NCBI chr 3:46,370,142...46,376,206
Ensembl chr 3:46,370,946...46,376,206 		JBrowse link
G CD14 CD14 molecule involved_in
acts_upstream_of_or_within		 ISO
IEA
IBA
IMP
IDA		 (PMID:8612135)
(PMID:12594207)		 RGD
TreeGrafter
GO_Central
UniProt
Ensembl
MGI		 PMID:8612135 PMID:12594207 PMID:22511970 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 RGD:7183752 NCBI chr 5:140,631,732...140,633,701
Ensembl chr 5:140,631,728...140,633,700 		JBrowse link
G CD180 CD180 molecule involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:10880523) Ensembl
MGI
GO_Central
TreeGrafter		 PMID:10880523 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:67,179,613...67,196,799
Ensembl chr 5:67,179,613...67,196,799 		JBrowse link
G CD274 CD274 molecule involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 9:5,450,542...5,470,554
Ensembl chr 9:5,450,503...5,470,566 		JBrowse link
G CD300LB CD300 molecule like family member b acts_upstream_of_or_within ISO (PMID:22772446) MGI PMID:22772446 NCBI chr17:74,521,174...74,531,475
Ensembl chr17:74,521,174...74,531,475 		JBrowse link
G CD36 CD36 molecule (CD36 blood group) involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16061696) Ensembl
MGI		 PMID:16061696 GO_REF:0000107 NCBI chr 7:80,602,207...80,679,274
Ensembl chr 7:80,369,575...80,679,277 		JBrowse link
G CD40 CD40 molecule involved_in ISO
IEA		 RGD
Ensembl		 PMID:19271152 GO_REF:0000107 RGD:5491178 NCBI chr20:46,118,314...46,129,858
Ensembl chr20:46,118,271...46,129,863 		JBrowse link
G CD68 CD68 molecule involved_in ISS ARUK-UCL GO_REF:0000024 NCBI chr17:7,579,638...7,582,111
Ensembl chr17:7,579,491...7,582,111 		JBrowse link
G CD80 CD80 molecule involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:19047410) TreeGrafter
MGI
GO_Central		 PMID:19047410 GO_REF:0000033 GO_REF:0000118 NCBI chr 3:119,524,293...119,559,614
Ensembl chr 3:119,524,293...119,559,614 		JBrowse link
G CD86 CD86 molecule acts_upstream_of_or_within
involved_in		 ISO
IEA
IBA		 (PMID:19047410) RGD
MGI
TreeGrafter
GO_Central		 PMID:19047410 PMID:21039614 GO_REF:0000033 GO_REF:0000118 RGD:4892198 NCBI chr 3:122,055,362...122,121,136
Ensembl chr 3:122,055,362...122,121,139 		JBrowse link
G CDC73 cell division cycle 73 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:193,122,031...193,254,815
Ensembl chr 1:193,121,983...193,254,815 		JBrowse link
G CDK19 cyclin dependent kinase 19 involved_in ISO
IEA		 RGD
Ensembl		 PMID:20066559 GO_REF:0000107 RGD:9590278 NCBI chr 6:110,609,978...110,815,855
Ensembl chr 6:110,609,978...110,815,958 		JBrowse link
G CDK4 cyclin dependent kinase 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8543804) Ensembl
MGI		 PMID:8543804 GO_REF:0000107 NCBI chr12:57,747,727...57,752,310
Ensembl chr12:57,747,727...57,756,013 		JBrowse link
G CEBPB CCAAT enhancer binding protein beta ISO RGD PMID:18405661 RGD:10401220 NCBI chr20:50,190,583...50,192,690
Ensembl chr20:50,190,830...50,192,668 		JBrowse link
G CEBPE CCAAT enhancer binding protein epsilon involved_in ISO
IEA		 RGD
Ensembl		 PMID:9593684 GO_REF:0000107 RGD:728287 NCBI chr14:23,117,306...23,119,255
Ensembl chr14:23,117,036...23,120,256 		JBrowse link
G CFH complement factor H acts_upstream_of_or_within ISO (PMID:19828624) RGD
MGI		 PMID:12121434 PMID:19828624 RGD:632369 NCBI chr 1:196,652,043...196,747,504
Ensembl chr 1:196,651,754...196,752,476 		JBrowse link
G CHMP5 charged multivesicular body protein 5 involved_in IMP (PMID:27812135) UniProt PMID:27812135 NCBI chr 9:33,265,049...33,282,070
Ensembl chr 9:33,264,879...33,282,070 		JBrowse link
G CMPK2 cytidine/uridine monophosphate kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7751651) Ensembl
MGI		 PMID:7751651 GO_REF:0000107 NCBI chr 2:6,840,553...6,866,635
Ensembl chr 2:6,840,570...6,866,635 		JBrowse link
G CPEB1 cytoplasmic polyadenylation element binding protein 1 ISO RGD PMID:21620800 RGD:9685153 NCBI chr15:82,543,201...82,648,795
Ensembl chr15:82,543,201...82,648,861 		JBrowse link
G CR2 complement C3d receptor 2 acts_upstream_of_or_within ISO (PMID:19828624) MGI PMID:19828624 NCBI chr 1:207,454,328...207,489,892
Ensembl chr 1:207,453,024...207,489,895 		JBrowse link
G CSF2 colony stimulating factor 2 involved_in ISO
IEA		 RGD
Ensembl		 PMID:18387647 GO_REF:0000107 RGD:5131517 NCBI chr 5:132,073,789...132,076,170
Ensembl chr 5:132,073,789...132,076,170 		JBrowse link
G CSF3 colony stimulating factor 3 involved_in ISO
IEA		 RGD
Ensembl		 PMID:19732808 GO_REF:0000107 RGD:5133735 NCBI chr17:40,015,440...40,017,813
Ensembl chr17:40,015,361...40,017,813 		JBrowse link
G CTR9 CTR9 homolog, Paf1/RNA polymerase II complex component involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr11:10,751,246...10,779,746
Ensembl chr11:10,751,246...10,801,625 		JBrowse link
G CX3CR1 C-X3-C motif chemokine receptor 1 involved_in ISO
ISS
IEA		 RGD
ARUK-UCL
Ensembl		 PMID:10422773 GO_REF:0000024 GO_REF:0000107 RGD:4892028 NCBI chr 3:39,263,494...39,292,966
Ensembl chr 3:39,263,495...39,281,735 		JBrowse link
G CXCL1 C-X-C motif chemokine ligand 1 involved_in ISO
IBA		 RGD
GO_Central		 PMID:10738946 GO_REF:0000033 RGD:5135239 NCBI chr 4:73,869,393...73,871,308
Ensembl chr 4:73,869,393...73,871,308 		JBrowse link
G CXCL10 C-X-C motif chemokine ligand 10 acts_upstream_of_or_within
involved_in		 IMP
IBA		 (PMID:23776175) MGI
GO_Central		 PMID:23776175 GO_REF:0000033 NCBI chr 4:76,021,118...76,023,497
Ensembl chr 4:76,021,118...76,023,497 		JBrowse link
G CXCL11 C-X-C motif chemokine ligand 11 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:76,033,682...76,036,070
Ensembl chr 4:76,033,682...76,041,415 		JBrowse link
G CXCL13 C-X-C motif chemokine ligand 13 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:77,511,753...77,611,834
Ensembl chr 4:77,511,753...77,611,834 		JBrowse link
G CXCL16 C-X-C motif chemokine ligand 16 involved_in ISO (MGI:1891794|PMID:11017100) UniProt PMID:11017100 MGI:1891794 NCBI chr17:4,733,533...4,739,928
Ensembl chr17:4,733,533...4,739,928 		JBrowse link
G CXCL2 C-X-C motif chemokine ligand 2 involved_in ISO
IBA		 RGD
GO_Central		 PMID:16239643 GO_REF:0000033 RGD:5135237 NCBI chr 4:74,097,040...74,099,195
Ensembl chr 4:74,097,040...74,099,196 		JBrowse link
G CXCL3 C-X-C motif chemokine ligand 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:74,036,589...74,038,689
Ensembl chr 4:74,036,589...74,038,807 		JBrowse link
G CXCL5 C-X-C motif chemokine ligand 5 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:73,995,642...73,998,677
Ensembl chr 4:73,995,642...73,998,677 		JBrowse link
G CXCL6 C-X-C motif chemokine ligand 6 involved_in ISO
IBA
IDA		 (PMID:8399143) RGD
GO_Central
UniProt		 PMID:8399143 PMID:15778492 GO_REF:0000033 RGD:5135262 NCBI chr 4:73,836,678...73,838,760
Ensembl chr 4:73,836,640...73,849,064 		JBrowse link
G CXCL8 C-X-C motif chemokine ligand 8 involved_in ISO
IBA
IDA		 (PMID:19912257) RGD
GO_Central
BHF-UCL		 PMID:19912257 PMID:31442273 GO_REF:0000033 RGD:150540302 NCBI chr 4:73,740,569...73,743,716
Ensembl chr 4:73,740,519...73,743,716 		JBrowse link
G CXCL9 C-X-C motif chemokine ligand 9 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:76,001,275...76,007,509
Ensembl chr 4:76,001,275...76,007,509 		JBrowse link
G CYP11A1 cytochrome P450 family 11 subfamily A member 1 ISO RGD PMID:20665543 RGD:4145535 NCBI chr15:74,337,762...74,367,646
Ensembl chr15:74,337,759...74,367,646 		JBrowse link
G CYP17A1 cytochrome P450 family 17 subfamily A member 1 ISO RGD PMID:20665543 RGD:4145535 NCBI chr10:102,830,531...102,837,413
Ensembl chr10:102,830,531...102,837,472 		JBrowse link
G DAB2IP DAB2 interacting protein involved_in IDA
IEA		 (PMID:19948740) UniProt
Ensembl		 PMID:19948740 GO_REF:0000107 NCBI chr 9:121,567,074...121,785,530
Ensembl chr 9:121,567,057...121,785,530 		JBrowse link
G DEFA1 defensin alpha 1 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 8:6,977,649...6,980,092
Ensembl chr 8:6,977,649...6,980,092 		JBrowse link
G DEFA1B defensin alpha 1B involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 8:6,996,766...6,999,198
Ensembl chr 8:6,996,766...6,999,198 		JBrowse link
G DEFA3 defensin alpha 3 involved_in
acts_upstream_of_or_within		 IBA
ISO
IEA		 (PMID:11248802) GO_Central
MGI
TreeGrafter		 PMID:11248802 GO_REF:0000033 GO_REF:0000118 NCBI chr 8:7,015,869...7,018,297
Ensembl chr 8:7,015,869...7,018,297 		JBrowse link
G DEFA4 defensin alpha 4 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 8:6,935,820...6,938,306
Ensembl chr 8:6,935,820...6,938,306 		JBrowse link
G DEFA5 defensin alpha 5 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 8:7,055,304...7,056,739
Ensembl chr 8:7,055,304...7,056,739 		JBrowse link
G DEFA6 defensin alpha 6 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 8:6,924,697...6,926,076
Ensembl chr 8:6,924,697...6,926,076 		JBrowse link
G EDNRB endothelin receptor type B involved_in ISO
IEA		 RGD
Ensembl		 PMID:18091567 GO_REF:0000107 RGD:4892289 NCBI chr13:77,895,481...77,975,527
Ensembl chr13:77,895,481...77,975,529 		JBrowse link
G EFNB2 ephrin B2 ISO RGD PMID:33794069 RGD:127285659 NCBI chr13:106,489,745...106,535,662
Ensembl chr13:106,489,745...106,535,662 		JBrowse link
G ENTPD1 ectonucleoside triphosphate diphosphohydrolase 1 ISO RGD PMID:23990338 RGD:9685490 NCBI chr10:95,694,186...95,877,266
Ensembl chr10:95,711,779...95,877,266 		JBrowse link
G ENTPD2 ectonucleoside triphosphate diphosphohydrolase 2 ISO RGD PMID:23990338 RGD:9685490 NCBI chr 9:137,048,107...137,054,061
Ensembl chr 9:137,048,107...137,054,061 		JBrowse link
G EPAS1 endothelial PAS domain protein 1 ISO RGD PMID:12099714 RGD:11041576 NCBI chr 2:46,297,407...46,386,697
Ensembl chr 2:46,293,667...46,386,697 		JBrowse link
G EPHB2 EPH receptor B2 involved_in ISO
IEA		 RGD
Ensembl		 PMID:33794069 GO_REF:0000107 RGD:127285659 NCBI chr 1:22,710,838...22,921,500
Ensembl chr 1:22,710,839...22,921,500 		JBrowse link
G ESR2 estrogen receptor 2 ISO negative regulation of cell death RGD PMID:21127968 RGD:5508811 NCBI chr14:64,226,707...64,338,613
Ensembl chr14:64,084,232...64,338,112 		JBrowse link
G FCAR Fc alpha receptor involved_in IDA (PMID:25339672) CAFA PMID:25339672 NCBI chr19:54,874,235...54,891,420
Ensembl chr19:54,874,235...54,891,420 		JBrowse link
G FCGR2B Fc gamma receptor IIb ISO RGD PMID:19106808 RGD:5147925 NCBI chr 1:161,647,243...161,678,654
Ensembl chr 1:161,663,143...161,678,654 		JBrowse link
G FCGR3A Fc gamma receptor IIIa ISO RGD PMID:19106808 RGD:5147925 NCBI chr 1:161,541,759...161,550,737
Ensembl chr 1:161,541,759...161,550,968 		JBrowse link
G FGFR1 fibroblast growth factor receptor 1 ISO RGD PMID:30250515 RGD:25330356 NCBI chr 8:38,411,143...38,468,635
Ensembl chr 8:38,400,215...38,468,834 		JBrowse link
G FN1 fibronectin 1 ISO RGD PMID:11819312 RGD:7205475 NCBI chr 2:215,360,865...215,436,068
Ensembl chr 2:215,360,440...215,436,073 		JBrowse link
G FUBP1 far upstream element binding protein 1 ISO RGD PMID:23797733 RGD:13673879 NCBI chr 1:77,944,055...77,979,501
Ensembl chr 1:77,944,055...77,979,110 		JBrowse link
G GATA1 GATA binding protein 1 involved_in ISO
IEA		 RGD
Ensembl		 PMID:17687519 GO_REF:0000107 RGD:5131526 NCBI chr  X:48,786,590...48,794,311
Ensembl chr  X:48,786,540...48,794,311 		JBrowse link
G GBP1 guanylate binding protein 1 involved_in ISO (MGI:5565107|PMID:24715728) UniProt PMID:24715728 MGI:5565107 NCBI chr 1:89,052,319...89,065,208
Ensembl chr 1:89,051,882...89,065,360 		JBrowse link
G GBP2 guanylate binding protein 2 involved_in
acts_upstream_of_or_within		 ISS
ISO		 (PMID:18025219) UniProt
MGI		 PMID:18025219 GO_REF:0000024 NCBI chr 1:89,106,132...89,126,114
Ensembl chr 1:89,106,132...89,150,456 		JBrowse link
G GBP3 guanylate binding protein 3 involved_in ISS UniProt GO_REF:0000024 NCBI chr 1:89,006,680...89,022,866
Ensembl chr 1:89,006,679...89,022,894 		JBrowse link
G GBP4 guanylate binding protein 4 involved_in ISO (MGI:5565107|PMID:24715728) UniProt PMID:24715728 MGI:5565107 NCBI chr 1:89,181,144...89,198,942
Ensembl chr 1:89,181,144...89,198,942 		JBrowse link
G GBP5 guanylate binding protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:89,256,189...89,272,860
Ensembl chr 1:89,256,189...89,272,860 		JBrowse link
G GFER growth factor, augmenter of liver regeneration involved_in ISO
IEA		 RGD
Ensembl		 PMID:23073658 GO_REF:0000107 RGD:9685733 NCBI chr16:1,984,193...1,987,749
Ensembl chr16:1,984,193...1,987,749 		JBrowse link
G GFI1 growth factor independent 1 transcriptional repressor involved_in IEP (PMID:20547752) UniProt PMID:20547752 NCBI chr 1:92,473,043...92,486,925
Ensembl chr 1:92,473,043...92,486,925 		JBrowse link
G GHSR growth hormone secretagogue receptor involved_in ISO
IEA		 RGD
Ensembl		 PMID:15155262 GO_REF:0000107 RGD:12905047 NCBI chr 3:172,443,291...172,448,456
Ensembl chr 3:172,443,291...172,448,456 		JBrowse link
G GIT1 GIT ArfGAP 1 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr17:29,573,475...29,589,648
Ensembl chr17:29,573,475...29,594,054 		JBrowse link
G GRK6 G protein-coupled receptor kinase 6 ISO RGD PMID:23359120 RGD:13792782 NCBI chr 5:177,425,523...177,442,891
Ensembl chr 5:177,403,204...177,442,901 		JBrowse link
G GSTP1 glutathione S-transferase pi 1 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr11:67,583,812...67,586,653
Ensembl chr11:67,583,742...67,586,656 		JBrowse link
G HADHB hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:26,244,939...26,290,465
Ensembl chr 2:26,243,170...26,290,465 		JBrowse link
G HAMP hepcidin antimicrobial peptide ISO RGD PMID:23506423 RGD:11041627 NCBI chr19:35,282,528...35,285,143
Ensembl chr19:35,280,716...35,285,143 		JBrowse link
G HAVCR2 hepatitis A virus cellular receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:157,085,832...157,109,044
Ensembl chr 5:157,085,422...157,142,869 		JBrowse link
G HDAC5 histone deacetylase 5 involved_in ISO
IEA		 RGD
Ensembl		 PMID:22933299 GO_REF:0000107 RGD:9590257 NCBI chr17:44,076,753...44,123,641
Ensembl chr17:44,076,746...44,123,702 		JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha ISO RGD PMID:19940979 RGD:5147884 NCBI chr14:61,695,513...61,748,258
Ensembl chr14:61,695,513...61,748,259 		JBrowse link
G HMGB1 high mobility group box 1 involved_in ISS ARUK-UCL GO_REF:0000024 NCBI chr13:30,456,704...30,617,597
Ensembl chr13:30,456,704...30,617,597 		JBrowse link
G HMGB2 high mobility group box 2 involved_in IEP (PMID:19811285) UniProt PMID:19811285 NCBI chr 4:173,331,376...173,334,358
Ensembl chr 4:173,331,376...173,334,432 		JBrowse link
G HMGCS2 3-hydroxy-3-methylglutaryl-CoA synthase 2 involved_in ISO
IEA		 RGD
Ensembl		 PMID:11578593 GO_REF:0000107 RGD:1599044 NCBI chr 1:119,747,996...119,768,932
Ensembl chr 1:119,748,002...119,768,905 		JBrowse link
G HNRNPM heterogeneous nuclear ribonucleoprotein M ISO RGD PMID:14597422 RGD:10054261 NCBI chr19:8,444,975...8,489,114
Ensembl chr19:8,444,767...8,489,114 		JBrowse link
G HSF1 heat shock transcription factor 1 involved_in ISO
IEA		 RGD
Ensembl		 PMID:21540803 GO_REF:0000107 RGD:10402943 NCBI chr 8:144,291,604...144,314,720
Ensembl chr 8:144,291,591...144,314,720 		JBrowse link
G ICAM1 intercellular adhesion molecule 1 ISO RGD PMID:20674665 RGD:4145373 NCBI chr19:10,271,120...10,286,615
Ensembl chr19:10,271,093...10,286,615 		JBrowse link
G IFNB1 interferon beta 1 ISO RGD PMID:18412159 RGD:401854236 NCBI chr 9:21,077,104...21,077,942
Ensembl chr 9:21,077,104...21,077,942 		JBrowse link
G IFNG interferon gamma acts_upstream_of_or_within ISO (PMID:18791161) MGI PMID:18791161 NCBI chr12:68,154,768...68,159,740
Ensembl chr12:68,154,768...68,159,740 		JBrowse link
G IL10 interleukin 10 involved_in
acts_upstream_of_or_within		 IEA
ISO
IDA
NAS		 (PMID:19047410), (PMID:21609717)
(PMID:23071313)
(PMID:14971032)		 Ensembl
MGI
ARUK-UCL
BHF-UCL		 PMID:14971032 PMID:19047410 PMID:21609717 PMID:23071313 GO_REF:0000107 NCBI chr 1:206,767,602...206,772,494
Ensembl chr 1:206,767,602...206,774,541 		JBrowse link
G IL12A interleukin 12A acts_upstream_of_or_within ISO (PMID:19047410) MGI PMID:19047410 NCBI chr 3:159,988,835...159,996,019
Ensembl chr 3:159,988,835...159,996,019 		JBrowse link
G IL12B interleukin 12B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18025219), (PMID:21606371) Ensembl
MGI		 PMID:18025219 PMID:21606371 GO_REF:0000107 NCBI chr 5:159,314,780...159,330,487
Ensembl chr 5:159,314,780...159,330,863 		JBrowse link
G IL18 interleukin 18 involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:11739527 GO_REF:0000118 RGD:729357 NCBI chr11:112,143,260...112,164,094
Ensembl chr11:112,143,253...112,164,096 		JBrowse link
G IL1A interleukin 1 alpha involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:112,773,925...112,784,493
Ensembl chr 2:112,773,925...112,784,493 		JBrowse link
G IL1B interleukin 1 beta involved_in ISO
IBA
IEA		 RGD
GO_Central
TreeGrafter		 PMID:23200736 GO_REF:0000033 GO_REF:0000118 RGD:7175528 NCBI chr 2:112,829,751...112,836,779
Ensembl chr 2:112,829,751...112,836,816 		JBrowse link
G IL1F10 interleukin 1 family member 10 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:113,067,970...113,075,843
Ensembl chr 2:113,067,970...113,075,843 		JBrowse link
G IL24 interleukin 24 involved_in ISO
IEA		 RGD
Ensembl		 PMID:12182458 GO_REF:0000107 RGD:5147432 NCBI chr 1:206,897,443...206,904,139
Ensembl chr 1:206,897,443...206,904,139 		JBrowse link
G IL36A interleukin 36 alpha involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:113,005,459...113,011,072
Ensembl chr 2:113,005,459...113,008,044 		JBrowse link
G IL36B interleukin 36 beta involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:113,022,089...113,052,867
Ensembl chr 2:113,022,089...113,052,867 		JBrowse link
G IL36G interleukin 36 gamma involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:112,978,006...112,985,658
Ensembl chr 2:112,973,203...112,985,658 		JBrowse link
G IL36RN interleukin 36 receptor antagonist involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:113,058,638...113,064,744
Ensembl chr 2:113,058,638...113,065,382 		JBrowse link
G IL37 interleukin 37 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:112,911,165...112,918,882
Ensembl chr 2:112,911,165...112,918,882 		JBrowse link
G IL6 interleukin 6 acts_upstream_of_or_within ISO
IMP		 (PMID:23776175) RGD
MGI		 PMID:2789217 PMID:23776175 RGD:11049548 NCBI chr 7:22,727,200...22,731,998
Ensembl chr 7:22,725,884...22,732,002 		JBrowse link
G IRAK1 interleukin 1 receptor associated kinase 1 involved_in ISO
IBA
IEA		 RGD
GO_Central
TreeGrafter
Ensembl		 PMID:15793310 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 RGD:1579809 NCBI chr  X:154,010,507...154,019,902
Ensembl chr  X:154,010,506...154,019,902 		JBrowse link
G IRAK2 interleukin 1 receptor associated kinase 2 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 3:10,164,919...10,243,745
Ensembl chr 3:10,164,919...10,243,745 		JBrowse link
G IRAK3 interleukin 1 receptor associated kinase 3 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr12:66,189,214...66,254,622
Ensembl chr12:66,189,195...66,254,622 		JBrowse link
G IRAK4 interleukin 1 receptor associated kinase 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:43,758,951...43,789,541
Ensembl chr12:43,758,944...43,798,307 		JBrowse link
G IRF3 interferon regulatory factor 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21606371) Ensembl
MGI		 PMID:21606371 GO_REF:0000107 NCBI chr19:49,659,572...49,665,857
Ensembl chr19:49,659,569...49,665,875 		JBrowse link
G IRF8 interferon regulatory factor 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9348310) Ensembl
MGI		 PMID:9348310 GO_REF:0000107 NCBI chr16:85,899,162...85,922,609
Ensembl chr16:85,899,116...85,922,606 		JBrowse link
G IRGM immunity related GTPase M involved_in IMP (PMID:25891078) UniProt PMID:25891078 NCBI chr 5:150,846,521...150,902,402
Ensembl chr 5:150,846,521...150,900,736 		JBrowse link
G JAK2 Janus kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21606371) Ensembl
MGI		 PMID:21606371 GO_REF:0000107 NCBI chr 9:4,984,390...5,129,948
Ensembl chr 9:4,984,390...5,129,948 		JBrowse link
G JUN Jun proto-oncogene, AP-1 transcription factor subunit involved_in ISO (PMID:25110868) AgBase PMID:25110868 NCBI chr 1:58,780,791...58,784,047
Ensembl chr 1:58,776,845...58,784,048 		JBrowse link
G KLRC4-KLRK1 KLRC4-KLRK1 readthrough involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:10,372,353...10,410,146
Ensembl chr12:10,372,353...10,410,146
Ensembl chr12:10,372,353...10,410,146 		JBrowse link
G KLRK1 killer cell lectin like receptor K1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14764662) Ensembl
MGI		 PMID:14764662 GO_REF:0000107 NCBI chr12:10,372,353...10,390,041
Ensembl chr12:10,372,353...10,391,874 		JBrowse link
G KMO kynurenine 3-monooxygenase involved_in ISO
IEA		 RGD
Ensembl		 PMID:26524415 GO_REF:0000107 RGD:13703043 NCBI chr 1:241,532,378...241,595,642
Ensembl chr 1:241,532,134...241,595,642 		JBrowse link
G LBP lipopolysaccharide binding protein acts_upstream_of_or_within
involved_in		 IDA
IEA
IMP		 (PMID:12594207)
(PMID:24120359)		 MGI
Ensembl
UniProt		 PMID:12594207 PMID:24120359 GO_REF:0000107 NCBI chr20:38,346,482...38,377,013
Ensembl chr20:38,346,482...38,377,013 		JBrowse link
G LCN2 lipocalin 2 ISO RGD PMID:19329498 RGD:2316495 NCBI chr 9:128,149,453...128,153,453
Ensembl chr 9:128,149,071...128,153,453 		JBrowse link
G LDOC1 LDOC1 regulator of NFKB signaling involved_in IMP (PMID:27812135) UniProt PMID:27812135 NCBI chr  X:141,173,235...141,177,129
Ensembl chr  X:141,111,605...141,177,129 		JBrowse link
G LILRB1 leukocyte immunoglobulin like receptor B1 involved_in IEP (PMID:18094328) UniProt PMID:18094328 NCBI chr19:54,616,322...54,638,022
Ensembl chr19:54,617,158...54,638,022 		JBrowse link
G LILRB2 leukocyte immunoglobulin like receptor B2 involved_in IMP (PMID:14971032) BHF-UCL PMID:14971032 NCBI chr19:54,273,812...54,281,110
Ensembl chr19:54,273,812...54,281,184 		JBrowse link
G LITAF lipopolysaccharide induced TNF factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16954198) Ensembl
MGI		 PMID:16954198 GO_REF:0000107 NCBI chr16:11,547,722...11,640,317
Ensembl chr16:11,547,722...11,636,381 		JBrowse link
G LTC4S leukotriene C4 synthase ISO RGD PMID:9794912 RGD:2316634 NCBI chr 5:179,793,986...179,796,647
Ensembl chr 5:179,793,980...179,796,647 		JBrowse link
G LY96 lymphocyte antigen 96 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:73,991,392...74,099,857
Ensembl chr 8:73,991,392...74,029,079 		JBrowse link
G MALT1 MALT1 paracaspase involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:58,671,465...58,754,477
Ensembl chr18:58,671,465...58,754,477 		JBrowse link
G MAP2K3 mitogen-activated protein kinase kinase 3 involved_in ISO
IEA		 RGD
Ensembl		 PMID:14670949 GO_REF:0000107 RGD:7495812 NCBI chr17:21,284,711...21,315,240
Ensembl chr17:21,284,672...21,315,232 		JBrowse link
G MAP2K7 mitogen-activated protein kinase kinase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:7,903,877...7,914,478
Ensembl chr19:7,903,843...7,914,478 		JBrowse link
G MAPK14 mitogen-activated protein kinase 14 acts_upstream_of_or_within IDA (PMID:23776175) MGI PMID:23776175 NCBI chr 6:36,027,808...36,124,214
Ensembl chr 6:36,027,782...36,111,236 		JBrowse link
G MAPK8 mitogen-activated protein kinase 8 acts_upstream_of_or_within IDA (PMID:23776175) MGI PMID:23776175 NCBI chr10:48,306,677...48,439,360
Ensembl chr10:48,306,639...48,439,360 		JBrowse link
G MAPK9 mitogen-activated protein kinase 9 ISO RGD PMID:9475517 RGD:2304245 NCBI chr 5:180,233,143...180,292,083
Ensembl chr 5:180,233,143...180,292,099 		JBrowse link
G MEF2C myocyte enhancer factor 2C involved_in ISS UniProt GO_REF:0000024 NCBI chr 5:88,717,117...88,904,105
Ensembl chr 5:88,717,117...88,904,257 		JBrowse link
G MIR107 microRNA 107 acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr10:89,592,747...89,592,827
Ensembl chr10:89,592,747...89,592,827 		JBrowse link
G MIR10A microRNA 10a acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr17:48,579,838...48,579,947
Ensembl chr17:48,579,838...48,579,947 		JBrowse link
G MIR125A microRNA 125a acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr19:51,693,254...51,693,339
Ensembl chr19:51,693,254...51,693,339 		JBrowse link
G MIR128-1 microRNA 128-1 involved_in IMP (PMID:24415783) BHF-UCL PMID:24415783 NCBI chr 2:135,665,397...135,665,478
Ensembl chr 2:135,665,397...135,665,478 		JBrowse link
G MIR128-2 microRNA 128-2 involved_in IMP (PMID:24415783) BHF-UCL PMID:24415783 NCBI chr 3:35,744,476...35,744,559
Ensembl chr 3:35,744,476...35,744,559 		JBrowse link
G MIR139 microRNA 139 acts_upstream_of_or_within ISO (PMID:21247879) MGI PMID:21247879 NCBI chr11:72,615,063...72,615,130
Ensembl chr11:72,615,063...72,615,130 		JBrowse link
G MIR140 microRNA 140 involved_in
acts_upstream_of_or_within		 IDA
ISO		 (PMID:30321456)
(PMID:18762567)		 ARUK-UCL
MGI		 PMID:18762567 PMID:30321456 NCBI chr16:69,933,081...69,933,180
Ensembl chr16:69,933,081...69,933,180 		JBrowse link
G MIR142 microRNA 142 acts_upstream_of_or_within ISO (PMID:21536037) MGI PMID:21536037 NCBI chr17:58,331,232...58,331,318
Ensembl chr17:58,331,232...58,331,318 		JBrowse link
G MIR146A microRNA 146a involved_in
acts_upstream_of_or_within		 ISS
ISO
IDA		 (PMID:18791161), (PMID:21247879)
(PMID:16885212)		 ARUK-UCL
MGI		 PMID:16885212 PMID:18791161 PMID:21247879 GO_REF:0000024 NCBI chr 5:160,485,352...160,485,450
Ensembl chr 5:160,485,352...160,485,450 		JBrowse link
G MIR146B microRNA 146b acts_upstream_of_or_within ISO (PMID:21247879) MGI PMID:21247879 NCBI chr10:102,436,512...102,436,584
Ensembl chr10:102,436,512...102,436,584 		JBrowse link
G MIR147B microRNA 147b acts_upstream_of_or_within ISO (PMID:21247879) MGI PMID:21247879 NCBI chr15:45,433,050...45,433,129
Ensembl chr15:45,433,050...45,433,129 		JBrowse link
G MIR150 microRNA 150 acts_upstream_of_or_within ISO (PMID:18762567), (PMID:21247879) MGI PMID:18762567 PMID:21247879 NCBI chr19:49,500,785...49,500,868
Ensembl chr19:49,500,785...49,500,868 		JBrowse link
G MIR155 microRNA 155 acts_upstream_of_or_within ISO (PMID:18762567), (PMID:21247879) MGI PMID:18762567 PMID:21247879 NCBI chr21:25,573,980...25,574,044
Ensembl chr21:25,573,980...25,574,044 		JBrowse link
G MIR15A microRNA 15a acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr13:50,049,119...50,049,201
Ensembl chr13:50,049,119...50,049,201 		JBrowse link
G MIR16-2 microRNA 16-2 acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr 3:160,404,745...160,404,825
Ensembl chr 3:160,404,745...160,404,825 		JBrowse link
G MIR17 microRNA 17 involved_in ISS ARUK-UCL GO_REF:0000024 NCBI chr13:91,350,605...91,350,688
Ensembl chr13:91,350,605...91,350,688 		JBrowse link
G MIR181A1 microRNA 181a-1 acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr 1:198,859,044...198,859,153
Ensembl chr 1:198,859,044...198,859,153 		JBrowse link
G MIR181A2 microRNA 181a-2 acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr 9:124,692,442...124,692,551
Ensembl chr 9:124,692,442...124,692,551 		JBrowse link
G MIR181B2 microRNA 181b-2 acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr 9:124,693,710...124,693,798
Ensembl chr 9:124,693,710...124,693,798 		JBrowse link
G MIR181C microRNA 181c acts_upstream_of_or_within ISO (PMID:18762567), (PMID:21247879) MGI PMID:18762567 PMID:21247879 NCBI chr19:13,874,699...13,874,808
Ensembl chr19:13,874,699...13,874,808 		JBrowse link
G MIR182 microRNA 182 acts_upstream_of_or_within ISO (PMID:21247879) MGI PMID:21247879 NCBI chr 7:129,770,383...129,770,492
Ensembl chr 7:129,770,383...129,770,492 		JBrowse link
G MIR184 microRNA 184 acts_upstream_of_or_within ISO (PMID:21247879) MGI PMID:21247879 NCBI chr15:79,209,788...79,209,871
Ensembl chr15:79,209,788...79,209,871 		JBrowse link
G MIR187 microRNA 187 involved_in IDA (PMID:23071313) ARUK-UCL PMID:23071313 NCBI chr18:35,904,818...35,904,926
Ensembl chr18:35,904,818...35,904,926 		JBrowse link
G MIR193A microRNA 193a acts_upstream_of_or_within ISO (PMID:21247879) MGI PMID:21247879 NCBI chr17:31,559,996...31,560,083
Ensembl chr17:31,559,996...31,560,083 		JBrowse link
G MIR194-1 microRNA 194-1 acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr 1:220,118,157...220,118,241
Ensembl chr 1:220,118,157...220,118,241 		JBrowse link
G MIR194-2 microRNA 194-2 acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr11:64,891,355...64,891,439
Ensembl chr11:64,891,355...64,891,439 		JBrowse link
G MIR199A1 microRNA 199a-1 acts_upstream_of_or_within ISO (PMID:21247879) MGI PMID:21247879 NCBI chr19:10,817,426...10,817,496
Ensembl chr19:10,817,426...10,817,496 		JBrowse link
G MIR199A2 microRNA 199a-2 acts_upstream_of_or_within ISO (PMID:21247879) MGI PMID:21247879 NCBI chr 1:172,144,535...172,144,644
Ensembl chr 1:172,144,535...172,144,644 		JBrowse link
G MIR200C microRNA 200c acts_upstream_of_or_within ISO (PMID:21247879) MGI PMID:21247879 NCBI chr12:6,963,699...6,963,766
Ensembl chr12:6,963,699...6,963,766 		JBrowse link
G MIR202 microRNA 202 acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr10:133,247,511...133,247,620
Ensembl chr10:133,247,511...133,247,620 		JBrowse link
G MIR205 microRNA 205 acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr 1:209,432,133...209,432,242
Ensembl chr 1:209,432,133...209,432,242 		JBrowse link
G MIR20A microRNA 20a involved_in ISS ARUK-UCL GO_REF:0000024 NCBI chr13:91,351,065...91,351,135
Ensembl chr13:91,351,065...91,351,135 		JBrowse link
G MIR21 microRNA 21 involved_in ISO
IMP
IDA		 (PMID:19946272)
(PMID:29039542)		 RGD
BHF-UCL
ARUK-UCL		 PMID:19946272 PMID:29039542 PMID:30542412 RGD:41410885 NCBI chr17:59,841,266...59,841,337
Ensembl chr17:59,841,266...59,841,337 		JBrowse link
G MIR210 microRNA 210 acts_upstream_of_or_within ISO (PMID:21247879) MGI PMID:21247879 NCBI chr11:568,089...568,198
Ensembl chr11:568,089...568,198 		JBrowse link
G MIR217 microRNA 217 acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr 2:55,982,967...55,983,076
Ensembl chr 2:55,982,967...55,983,076 		JBrowse link
G MIR223 microRNA 223 acts_upstream_of_or_within
involved_in		 ISO
IMP		 (PMID:18762567), (PMID:18791161), (PMID:21247879)
(PMID:34637033)		 RGD
MGI
BHF-UCL		 PMID:18762567 PMID:18791161 PMID:21247879 PMID:29707878 PMID:34637033 RGD:25823197 NCBI chr  X:66,018,870...66,018,979
Ensembl chr  X:66,018,870...66,018,979 		JBrowse link
G MIR224 microRNA 224 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18762567), (PMID:21247879) RNAcentral
MGI		 PMID:18762567 PMID:21247879 GO_REF:0000115 NCBI chr  X:151,958,578...151,958,658
Ensembl chr  X:151,958,578...151,958,658 		JBrowse link
G MIR23B microRNA 23b acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr 9:95,085,208...95,085,304
Ensembl chr 9:95,085,208...95,085,304 		JBrowse link
G MIR24-1 microRNA 24-1 acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr 9:95,086,021...95,086,088
Ensembl chr 9:95,086,021...95,086,088 		JBrowse link
G MIR24-2 microRNA 24-2 acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr19:13,836,287...13,836,359
Ensembl chr19:13,836,287...13,836,359 		JBrowse link
G MIR26A1 microRNA 26a-1 acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr 3:37,969,404...37,969,480
Ensembl chr 3:37,969,404...37,969,480 		JBrowse link
G MIR26A2 microRNA 26a-2 acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr12:57,824,609...57,824,692
Ensembl chr12:57,824,609...57,824,692 		JBrowse link
G MIR26B microRNA 26b acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr 2:218,402,646...218,402,722
Ensembl chr 2:218,402,646...218,402,722 		JBrowse link
G MIR27A microRNA 27a acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr19:13,836,440...13,836,517
Ensembl chr19:13,836,440...13,836,517 		JBrowse link
G MIR29A microRNA 29a acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr 7:130,876,747...130,876,810
Ensembl chr 7:130,876,747...130,876,810 		JBrowse link
G MIR29B1 microRNA 29b-1 acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr 7:130,877,459...130,877,539
Ensembl chr 7:130,877,459...130,877,539 		JBrowse link
G MIR29B2 microRNA 29b-2 acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr 1:207,802,443...207,802,523
Ensembl chr 1:207,802,443...207,802,523 		JBrowse link
G MIR30B microRNA 30b acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr 8:134,800,520...134,800,607
Ensembl chr 8:134,800,520...134,800,607 		JBrowse link
G MIR30C1 microRNA 30c-1 acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr 1:40,757,284...40,757,372
Ensembl chr 1:40,757,284...40,757,372 		JBrowse link
G MIR30C2 microRNA 30c-2 acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr 6:71,376,960...71,377,031
Ensembl chr 6:71,376,960...71,377,031 		JBrowse link
G MIR30D microRNA 30d acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr 8:134,804,876...134,804,945
Ensembl chr 8:134,804,876...134,804,945 		JBrowse link
G MIR323A microRNA 323a acts_upstream_of_or_within ISO (PMID:21247879) MGI PMID:21247879 NCBI chr14:101,025,732...101,025,817
Ensembl chr14:101,025,732...101,025,817 		JBrowse link
G MIR342 microRNA 342 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18762567), (PMID:21247879) RNAcentral
MGI		 PMID:18762567 PMID:21247879 GO_REF:0000115 NCBI chr14:100,109,655...100,109,753
Ensembl chr14:100,109,655...100,109,753 		JBrowse link
G MIR345 microRNA 345 acts_upstream_of_or_within ISO (PMID:21247879) MGI PMID:21247879 NCBI chr14:100,307,859...100,307,956
Ensembl chr14:100,307,859...100,307,956 		JBrowse link
G MIR371A microRNA 371a acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr19:53,787,675...53,787,741
Ensembl chr19:53,787,675...53,787,741 		JBrowse link
G MIR381 microRNA 381 acts_upstream_of_or_within ISO (PMID:21247879) MGI PMID:21247879 NCBI chr14:101,045,920...101,045,994
Ensembl chr14:101,045,920...101,045,994 		JBrowse link
G MIR383 microRNA 383 acts_upstream_of_or_within ISO (PMID:21247879) MGI PMID:21247879 NCBI chr 8:14,853,438...14,853,510
Ensembl chr 8:14,853,438...14,853,510 		JBrowse link
G MIR409 microRNA 409 acts_upstream_of_or_within ISO (PMID:21247879) MGI PMID:21247879 NCBI chr14:101,065,300...101,065,378
Ensembl chr14:101,065,300...101,065,378 		JBrowse link
G MIR425 microRNA 425 acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr 3:49,020,148...49,020,234
Ensembl chr 3:49,020,148...49,020,234 		JBrowse link
G MIR431 microRNA 431 acts_upstream_of_or_within ISO (PMID:21247879) MGI PMID:21247879 NCBI chr14:100,881,007...100,881,120
Ensembl chr14:100,881,007...100,881,120 		JBrowse link
G MIR433 microRNA 433 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21247879) RNAcentral
MGI		 PMID:21247879 GO_REF:0000115 NCBI chr14:100,881,886...100,881,978
Ensembl chr14:100,881,886...100,881,978 		JBrowse link
G MIR484 microRNA 484 acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr16:15,643,294...15,643,372
Ensembl chr16:15,643,294...15,643,372 		JBrowse link
G MIR486-1 microRNA 486-1 acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr 8:41,660,441...41,660,508
Ensembl chr 8:41,660,441...41,660,508 		JBrowse link
G MIR494 microRNA 494 acts_upstream_of_or_within ISO (PMID:21247879) MGI PMID:21247879 NCBI chr14:101,029,634...101,029,714
Ensembl chr14:101,029,634...101,029,714 		JBrowse link
G MIR501 microRNA 501 acts_upstream_of_or_within ISO (PMID:21247879) MGI PMID:21247879 NCBI chr  X:50,009,722...50,009,805
Ensembl chr  X:50,009,722...50,009,805 		JBrowse link
G MIR502 microRNA 502 acts_upstream_of_or_within ISO (PMID:21247879) MGI PMID:21247879 NCBI chr  X:50,014,598...50,014,683
Ensembl chr  X:50,014,598...50,014,683 		JBrowse link
G MIR511 microRNA 511 acts_upstream_of_or_within ISO (PMID:22832163) MGI PMID:22832163 NCBI chr10:17,845,107...17,845,193
Ensembl chr10:17,845,107...17,845,193 		JBrowse link
G MIR598 microRNA 598 acts_upstream_of_or_within ISO (PMID:21247879) MGI PMID:21247879 NCBI chr 8:11,035,206...11,035,302
Ensembl chr 8:11,035,206...11,035,302 		JBrowse link
G MIR6869 microRNA 6869 involved_in IDA (PMID:29206292) ARUK-UCL PMID:29206292 NCBI chr20:1,392,900...1,392,961
Ensembl chr20:1,392,900...1,392,961 		JBrowse link
G MIR7-1 microRNA 7-1 acts_upstream_of_or_within ISO (PMID:21247879) MGI PMID:21247879 NCBI chr 9:83,969,748...83,969,857
Ensembl chr 9:83,969,748...83,969,857 		JBrowse link
G MIR7-3 microRNA 7-3 acts_upstream_of_or_within ISO (PMID:21247879) MGI PMID:21247879 NCBI chr19:4,770,670...4,770,779
Ensembl chr19:4,770,670...4,770,779 		JBrowse link
G MIR766 microRNA 766 involved_in IDA (PMID:30769772) ARUK-UCL PMID:30769772 NCBI chr  X:119,646,738...119,646,848
Ensembl chr  X:119,646,738...119,646,848 		JBrowse link
G MIR98 microRNA 98 acts_upstream_of_or_within ISO (PMID:21609717) MGI PMID:21609717 NCBI chr  X:53,556,223...53,556,341
Ensembl chr  X:53,556,223...53,556,341 		JBrowse link
G MIRLET7A2 microRNA let-7a-2 acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr11:122,146,522...122,146,593
Ensembl chr11:122,146,522...122,146,593 		JBrowse link
G MIRLET7G microRNA let-7g acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr 3:52,268,278...52,268,361
Ensembl chr 3:52,268,278...52,268,361 		JBrowse link
G MMP1 matrix metallopeptidase 1 ISO RGD PMID:21683124 RGD:7207286 NCBI chr11:102,789,919...102,798,160
Ensembl chr11:102,789,401...102,798,160 		JBrowse link
G MMP3 matrix metallopeptidase 3 involved_in TAS (PMID:25049354) ARUK-UCL PMID:25049354 NCBI chr11:102,835,801...102,843,609
Ensembl chr11:102,835,801...102,843,609 		JBrowse link
G MMP8 matrix metallopeptidase 8 involved_in IEA
ISS		 (PMID:25049354) Ensembl
ARUK-UCL		 PMID:25049354 GO_REF:0000107 NCBI chr11:102,711,796...102,724,954
Ensembl chr11:102,711,796...102,727,050 		JBrowse link
G MMP9 matrix metallopeptidase 9 involved_in ISO
TAS		 (PMID:25049354) RGD
ARUK-UCL		 PMID:21683124 PMID:25049354 RGD:7207286 NCBI chr20:46,008,908...46,016,561
Ensembl chr20:46,008,908...46,016,561 		JBrowse link
G MRC1 mannose receptor C-type 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22832163) Ensembl
MGI		 PMID:22832163 GO_REF:0000107 NCBI chr10:17,809,348...17,911,164
Ensembl chr10:17,809,348...17,911,164 		JBrowse link
G MYD88 MYD88 innate immune signal transduction adaptor involved_in ISS ARUK-UCL GO_REF:0000024 NCBI chr 3:38,138,661...38,143,022
Ensembl chr 3:38,138,552...38,143,024 		JBrowse link
G NCL nucleolin ISO RGD PMID:21309751 RGD:9686449 NCBI chr 2:231,453,531...231,464,484
Ensembl chr 2:231,453,531...231,483,641 		JBrowse link
G NFKB1 nuclear factor kappa B subunit 1 involved_in
acts_upstream_of_or_within		 ISO
IEA
IMP		 (PMID:23776175) RGD
Ensembl
MGI		 PMID:16842873 PMID:23776175 GO_REF:0000107 RGD:10045666 NCBI chr 4:102,501,359...102,617,302
Ensembl chr 4:102,501,330...102,617,302 		JBrowse link
G NFKBIB NFKB inhibitor beta involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:20060382) Ensembl
MGI
GO_Central
TreeGrafter		 PMID:20060382 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr19:38,899,666...38,908,889
Ensembl chr19:38,899,700...38,908,893 		JBrowse link
G NFKBIL1 NFKB inhibitor like 1 involved_in IDA (PMID:20829348) UniProt PMID:20829348 NCBI chr 6:31,546,851...31,558,829
Ensembl chr 6:31,546,870...31,558,829 		JBrowse link
G NFKBIZ NFKB inhibitor zeta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:101,827,990...101,861,022
Ensembl chr 3:101,827,991...101,861,022 		JBrowse link
G NLRP3 NLR family pyrin domain containing 3 involved_in IDA
IEA
IMP		 (PMID:28847925)
(PMID:12483741)		 UniProt
Ensembl
BHF-UCL		 PMID:12483741 PMID:28847925 GO_REF:0000107 NCBI chr 1:247,416,077...247,448,817
Ensembl chr 1:247,416,156...247,449,108 		JBrowse link
G NLRP7 NLR family pyrin domain containing 7 involved_in IEP (PMID:15817483) UniProt PMID:15817483 NCBI chr19:54,923,515...54,966,243
Ensembl chr19:54,923,509...54,966,312 		JBrowse link
G NOD2 nucleotide binding oligomerization domain containing 2 involved_in IMP (PMID:27812135) UniProt PMID:27812135 NCBI chr16:50,693,606...50,733,075
Ensembl chr16:50,693,588...50,733,077 		JBrowse link
G NOS2 nitric oxide synthase 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:18025219), (PMID:18791161) RGD
MGI
Ensembl		 PMID:18025219 PMID:18791161 PMID:21975807 GO_REF:0000107 RGD:5508737 NCBI chr17:27,756,766...27,800,529
Ensembl chr17:27,756,766...27,800,529 		JBrowse link
G NR1D1 nuclear receptor subfamily 1 group D member 1 involved_in IMP (PMID:18511497) BHF-UCL PMID:18511497 NCBI chr17:40,092,793...40,100,589
Ensembl chr17:40,092,793...40,100,589 		JBrowse link
G NR1H3 nuclear receptor subfamily 1 group H member 3 involved_in IDA
IEA		 (PMID:18511497) BHF-UCL
Ensembl		 PMID:18511497 GO_REF:0000107 NCBI chr11:47,248,300...47,269,033
Ensembl chr11:47,248,300...47,269,033 		JBrowse link
G NR1H4 nuclear receptor subfamily 1 group H member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:100,473,866...100,564,414
Ensembl chr12:100,473,708...100,564,414 		JBrowse link
G NUGGC nuclear GTPase, germinal center associated involved_in IDA (PMID:19734146) UniProt PMID:19734146 NCBI chr 8:28,021,964...28,083,936
Ensembl chr 8:28,021,964...28,083,936 		JBrowse link
G OGT O-linked N-acetylglucosamine (GlcNAc) transferase ISO RGD PMID:19098112 RGD:9590190 NCBI chr  X:71,533,104...71,575,892
Ensembl chr  X:71,533,087...71,575,892 		JBrowse link
G OPRK1 opioid receptor kappa 1 involved_in ISO
IEA		 RGD
Ensembl		 PMID:9645969 GO_REF:0000107 RGD:9831421 NCBI chr 8:53,225,724...53,251,637
Ensembl chr 8:53,225,724...53,251,637 		JBrowse link
G P2RY2 purinergic receptor P2Y2 ISO RGD PMID:18689605 RGD:2316659 NCBI chr11:73,218,281...73,242,427
Ensembl chr11:73,218,281...73,242,427 		JBrowse link
G PABPN1 poly(A) binding protein nuclear 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr14:23,321,457...23,326,163
Ensembl chr14:23,321,457...23,326,163 		JBrowse link
G PAF1 PAF1 homolog, Paf1/RNA polymerase II complex component involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr19:39,385,629...39,391,106
Ensembl chr19:39,385,629...39,391,154 		JBrowse link
G PARK7 Parkinsonism associated deglycase ISO RGD PMID:23847046 RGD:13462068 NCBI chr 1:7,961,711...7,985,505
Ensembl chr 1:7,954,291...7,985,505 		JBrowse link
G PDCD1LG2 programmed cell death 1 ligand 2 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 9:5,510,531...5,571,282
Ensembl chr 9:5,510,531...5,571,282 		JBrowse link
G PDCD4 programmed cell death 4 involved_in ISS
IEA		 BHF-UCL
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr10:110,871,928...110,900,006
Ensembl chr10:110,871,795...110,900,006 		JBrowse link
G PDE2A phosphodiesterase 2A involved_in ISO (MGI:5294515|PMID:21571906) UniProt PMID:21571906 MGI:5294515 NCBI chr11:72,576,141...72,674,422
Ensembl chr11:72,576,141...72,674,591 		JBrowse link
G PDE4B phosphodiesterase 4B involved_in
acts_upstream_of_or_within		 IEA
ISO
ISS		 (PMID:15585880) Ensembl
MGI
BHF-UCL		 PMID:15585880 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:65,792,510...66,374,579
Ensembl chr 1:65,792,514...66,374,579 		JBrowse link
G PDE4D phosphodiesterase 4D acts_upstream_of_or_within ISO (PMID:15585880) MGI PMID:15585880 NCBI chr 5:58,969,038...60,522,128
Ensembl chr 5:58,969,038...60,522,120 		JBrowse link
G PF4 platelet factor 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:73,980,811...73,982,124
Ensembl chr 4:73,980,811...73,982,027 		JBrowse link
G PF4V1 platelet factor 4 variant 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:73,853,296...73,854,483
Ensembl chr 4:73,853,296...73,854,483 		JBrowse link
G PLAA phospholipase A2 activating protein involved_in IMP (PMID:28007986) UniProt PMID:28007986 NCBI chr 9:26,903,372...26,947,242
Ensembl chr 9:26,903,372...26,947,242 		JBrowse link
G PLAU plasminogen activator, urokinase ISO RGD PMID:19184369 RGD:7241806 NCBI chr10:73,909,164...73,917,494
Ensembl chr10:73,909,177...73,917,496 		JBrowse link
G PLSCR1 phospholipid scramblase 1 involved_in ISO (MGI:3762685|PMID:17590392) UniProt PMID:17590392 MGI:3762685 NCBI chr 3:146,515,180...146,544,607
Ensembl chr 3:146,515,180...146,544,856 		JBrowse link
G PLSCR2 phospholipid scramblase 2 involved_in ISO (MGI:3762685|PMID:17590392) UniProt PMID:17590392 MGI:3762685 NCBI chr 3:146,391,420...146,495,991
Ensembl chr 3:146,391,421...146,495,991 		JBrowse link
G PLSCR3 phospholipid scramblase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:7,389,727...7,394,525
Ensembl chr17:7,389,727...7,394,842 		JBrowse link
G PLSCR4 phospholipid scramblase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:146,192,335...146,251,105
Ensembl chr 3:146,192,335...146,251,179 		JBrowse link
G PPARD peroxisome proliferator activated receptor delta ISO RGD PMID:15728586 RGD:1580656 NCBI chr 6:35,342,558...35,428,178
Ensembl chr 6:35,342,558...35,428,191 		JBrowse link
G PPARGC1A PPARG coactivator 1 alpha ISO RGD PMID:19853624 RGD:10059687 NCBI chr 4:23,792,021...24,472,905
Ensembl chr 4:23,755,041...23,904,089 		JBrowse link
G PPBP pro-platelet basic protein involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:73,986,439...73,988,190
Ensembl chr 4:73,986,439...73,988,190 		JBrowse link
G PPM1E protein phosphatase, Mg2+/Mn2+ dependent 1E involved_in IMP (PMID:27793001) BHF-UCL PMID:27793001 NCBI chr17:58,755,854...58,985,179
Ensembl chr17:58,755,854...58,985,179 		JBrowse link
G PRPF8 pre-mRNA processing factor 8 involved_in ISO
IEA		 RGD
Ensembl		 PMID:1345341 GO_REF:0000107 RGD:10045884 NCBI chr17:1,650,629...1,684,867
Ensembl chr17:1,650,629...1,684,867 		JBrowse link
G PTGER3 prostaglandin E receptor 3 ISO RGD PMID:14636300 RGD:10043359 NCBI chr 1:70,852,358...71,047,816
Ensembl chr 1:70,852,353...71,047,816 		JBrowse link
G PYCARD PYD and CARD domain containing involved_in IDA (PMID:12486103) UniProt PMID:12486103 NCBI chr16:31,201,486...31,202,760
Ensembl chr16:31,201,486...31,203,450 		JBrowse link
G RARA retinoic acid receptor alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:40,309,180...40,357,643
Ensembl chr17:40,309,180...40,357,643 		JBrowse link
G RELA RELA proto-oncogene, NF-kB subunit involved_in ISO
IBA
IEA
IMP		 (PMID:25762865) RGD
GO_Central
TreeGrafter
Ensembl
ARUK-UCL		 PMID:9918814 PMID:15728586 PMID:25762865 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 RGD:1580656 RGD:2298880 NCBI chr11:65,653,601...65,663,857
Ensembl chr11:65,653,599...65,663,090 		JBrowse link
G RHOA ras homolog family member A involved_in IDA (PMID:19734146) UniProt PMID:19734146 NCBI chr 3:49,359,145...49,411,976
Ensembl chr 3:49,359,139...49,412,998 		JBrowse link
G RIPK2 receptor interacting serine/threonine kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11894098)
(PMID:11894097)		 Ensembl
MGI		 PMID:11894097 PMID:11894098 GO_REF:0000107 NCBI chr 8:89,757,816...89,791,064
Ensembl chr 8:89,757,806...89,791,064 		JBrowse link
G SBNO2 strawberry notch homolog 2 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr19:1,107,638...1,174,268
Ensembl chr19:1,107,637...1,174,268 		JBrowse link
G SELENOS selenoprotein S involved_in IMP (PMID:18675776) BHF-UCL PMID:18675776 NCBI chr15:101,270,809...101,277,485
Ensembl chr15:101,270,817...101,277,500 		JBrowse link
G SERPINE1 serpin family E member 1 involved_in ISO
IMP		 (PMID:19916862) RGD
BHF-UCL		 PMID:19916862 PMID:20060032 RGD:13208812 NCBI chr 7:101,127,104...101,139,247
Ensembl chr 7:101,127,104...101,139,247 		JBrowse link
G SGMS1 sphingomyelin synthase 1 ISO RGD PMID:12353928 RGD:1302423 NCBI chr10:50,305,600...50,625,184
Ensembl chr10:50,305,586...50,625,163 		JBrowse link
G SHPK sedoheptulokinase involved_in IDA
IEA
IBA		 (PMID:22682222) UniProt
TreeGrafter
GO_Central
Ensembl		 PMID:22682222 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr17:3,608,240...3,636,250
Ensembl chr17:3,608,240...3,636,250 		JBrowse link
G SIRPA signal regulatory protein alpha involved_in ISS ARUK-UCL GO_REF:0000024 NCBI chr20:1,894,167...1,940,592
Ensembl chr20:1,894,167...1,940,592 		JBrowse link
G SLC12A2 solute carrier family 12 member 2 involved_in ISO (PMID:31786261) MGI PMID:31786261 NCBI chr 5:128,083,766...128,189,677
Ensembl chr 5:128,083,766...128,189,677 		JBrowse link
G SLC7A5 solute carrier family 7 member 5 involved_in ISO
IEA		 RGD
Ensembl		 PMID:29687865 GO_REF:0000107 RGD:151357004 NCBI chr16:87,830,023...87,869,507
Ensembl chr16:87,830,023...87,869,507 		JBrowse link
G SMR3B submaxillary gland androgen regulated protein 3B involved_in ISO PMID:9321881 UniProt PMID:9321881 RGD:8553737 NCBI chr 4:70,383,131...70,390,244
Ensembl chr 4:70,370,093...70,390,244 		JBrowse link
G SOCS1 suppressor of cytokine signaling 1 ISO RGD PMID:21742974 RGD:151347181 NCBI chr16:11,254,417...11,256,204
Ensembl chr16:11,254,417...11,256,204 		JBrowse link
G SPON2 spondin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14691481) Ensembl
MGI		 PMID:14691481 GO_REF:0000107 NCBI chr 4:1,166,932...1,208,844
Ensembl chr 4:1,166,932...1,208,962 		JBrowse link
G SRC SRC proto-oncogene, non-receptor tyrosine kinase involved_in ISO
IEA		 RGD
Ensembl		 PMID:20149623 GO_REF:0000107 RGD:2325014 NCBI chr20:37,344,699...37,406,050
Ensembl chr20:37,344,685...37,406,050 		JBrowse link
G STAP1 signal transducing adaptor family member 1 involved_in IEA
ISS		 Ensembl
BHF-UCL		 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:67,558,727...67,607,337
Ensembl chr 4:67,558,727...67,607,337 		JBrowse link
G STAR steroidogenic acute regulatory protein ISO RGD PMID:20665543 RGD:4145535 NCBI chr 8:38,142,700...38,150,952
Ensembl chr 8:38,142,700...38,150,992 		JBrowse link
G STAT1 signal transducer and activator of transcription 1 acts_upstream_of_or_within ISO (PMID:21606371) MGI PMID:21606371 NCBI chr 2:190,969,149...191,014,171
Ensembl chr 2:190,908,460...191,020,960 		JBrowse link
G TBXA2R thromboxane A2 receptor involved_in ISO
IEA		 RGD
Ensembl		 PMID:10513923 GO_REF:0000107 RGD:11059603 NCBI chr19:3,594,507...3,606,875
Ensembl chr19:3,594,507...3,606,875 		JBrowse link
G TFPI tissue factor pathway inhibitor ISO RGD PMID:11816723 RGD:727341 NCBI chr 2:187,464,230...187,554,435
Ensembl chr 2:187,464,230...187,565,760 		JBrowse link
G THPO thrombopoietin ISO RGD PMID:20236022 RGD:11073693 NCBI chr 3:184,371,935...184,379,688
Ensembl chr 3:184,371,935...184,381,968 		JBrowse link
G TICAM1 TIR domain containing adaptor molecule 1 involved_in IEA
ISS		 Ensembl
ParkinsonsUK-UCL		 GO_REF:0000024 GO_REF:0000107 NCBI chr19:4,815,932...4,831,712
Ensembl chr19:4,815,932...4,831,712 		JBrowse link
G TICAM2 TIR domain containing adaptor molecule 2 involved_in IDA
IMP		 (PMID:19412184)
(PMID:22685567)		 UniProt PMID:19412184 PMID:22685567 NCBI chr 5:115,578,496...115,602,479
Ensembl chr 5:115,578,496...115,602,479 		JBrowse link
G TLR4 toll like receptor 4 acts_upstream_of_or_within
involved_in		 ISO
IGI
ISS
IEA
IDA		 (PMID:10880523), (PMID:24740015)
(PMID:14691481)
(PMID:30321456)
(PMID:11432859)		 RGD
MGI
ARUK-UCL
BHF-UCL
Ensembl
UniProt		 PMID:10880523 PMID:11432859 PMID:14691481 PMID:20438866 PMID:24740015 More... GO_REF:0000024 GO_REF:0000107 RGD:7777075 NCBI chr 9:117,704,403...117,724,735
Ensembl chr 9:117,704,175...117,724,735 		JBrowse link
G TLR5 toll like receptor 5 involved_in ISO
IEA		 RGD
Ensembl		 PMID:21308757 GO_REF:0000107 RGD:5129495 NCBI chr 1:223,109,404...223,143,248
Ensembl chr 1:223,109,404...223,143,248 		JBrowse link
G TLR9 toll like receptor 9 involved_in ISO
IEA		 RGD
Ensembl		 PMID:20655116 PMID:21308757 GO_REF:0000107 RGD:5129495 RGD:5130179 NCBI chr 3:52,221,080...52,225,645
Ensembl chr 3:52,221,080...52,225,645 		JBrowse link
G TMED7-TICAM2 TMED7-TICAM2 readthrough involved_in IMP
IDA		 (PMID:22685567)
(PMID:19412184)		 UniProt PMID:19412184 PMID:22685567 NCBI chr 5:115,578,496...115,626,036
Ensembl chr 5:115,578,642...115,626,161 		JBrowse link
G TNF tumor necrosis factor acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:19047410), (PMID:20060382), (PMID:21606371) RGD
MGI
Ensembl		 PMID:10959811 PMID:15602748 PMID:17964727 PMID:19047410 PMID:20060382 More... GO_REF:0000107 RGD:14994703 RGD:14995441 RGD:1582142 NCBI chr 6:31,575,565...31,578,336
Ensembl chr 6:31,575,565...31,578,336 		JBrowse link
G TNFAIP3 TNF alpha induced protein 3 involved_in IDA (PMID:19912257), (PMID:21127049), (PMID:21220427) BHF-UCL PMID:19912257 PMID:21127049 PMID:21220427 NCBI chr 6:137,866,349...137,883,312
Ensembl chr 6:137,867,214...137,883,314 		JBrowse link
G TNFRSF1B TNF receptor superfamily member 1B involved_in IMP (PMID:22480688) BHF-UCL PMID:22480688 NCBI chr 1:12,166,991...12,209,220
Ensembl chr 1:12,166,991...12,209,228 		JBrowse link
G TNFSF4 TNF superfamily member 4 involved_in IDA (PMID:20844189) BHF-UCL PMID:20844189 NCBI chr 1:173,172,870...173,450,733
Ensembl chr 1:173,183,731...173,207,331 		JBrowse link
G TNIP1 TNFAIP3 interacting protein 1 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 5:151,029,943...151,087,685
Ensembl chr 5:151,029,945...151,093,577 		JBrowse link
G TNIP2 TNFAIP3 interacting protein 2 involved_in ISS
IEA
IBA		 UniProt
TreeGrafter
GO_Central		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 NCBI chr 4:2,741,648...2,756,336
Ensembl chr 4:2,741,648...2,756,342 		JBrowse link
G TNIP3 TNFAIP3 interacting protein 3 involved_in IDA
IBA
IEA		 (PMID:17088249) UniProt
GO_Central
TreeGrafter		 PMID:17088249 GO_REF:0000033 GO_REF:0000118 NCBI chr 4:121,131,408...121,227,483
Ensembl chr 4:121,131,408...121,227,466 		JBrowse link
G TRAF6 TNF receptor associated factor 6 acts_upstream_of_or_within IDA (PMID:23776175) MGI PMID:23776175 NCBI chr11:36,483,769...36,510,272
Ensembl chr11:36,483,769...36,510,272 		JBrowse link
G TREM1 triggering receptor expressed on myeloid cells 1 ISO RGD PMID:26383906 RGD:127284850 NCBI chr 6:41,267,385...41,286,682
Ensembl chr 6:41,267,926...41,286,682 		JBrowse link
G TRIM41 tripartite motif containing 41 involved_in IMP (PMID:27812135) UniProt PMID:27812135 NCBI chr 5:181,223,281...181,235,808
Ensembl chr 5:181,222,499...181,235,808 		JBrowse link
G TSPO translocator protein involved_in ISO
IEA		 RGD
Ensembl		 PMID:14678758 GO_REF:0000107 RGD:2317158 NCBI chr22:43,151,559...43,163,242
Ensembl chr22:43,151,547...43,163,242 		JBrowse link
G UPF1 UPF1 RNA helicase and ATPase involved_in TAS (PMID:26255671) UniProt PMID:26255671 NCBI chr19:18,831,959...18,868,230
Ensembl chr19:18,831,959...18,868,230 		JBrowse link
G VIM vimentin involved_in IMP (PMID:27812135) UniProt PMID:27812135 NCBI chr10:17,228,241...17,237,593
Ensembl chr10:17,228,241...17,237,593 		JBrowse link
G VLDLR very low density lipoprotein receptor ISO RGD PMID:16376325 RGD:1625574 NCBI chr 9:2,621,787...2,660,056
Ensembl chr 9:2,621,182...2,660,056 		JBrowse link
G VWF von Willebrand factor ISO RGD PMID:17708840 RGD:11079229 NCBI chr12:5,948,877...6,124,670
Ensembl chr12:5,948,877...6,124,770 		JBrowse link
G WNT5A Wnt family member 5A involved_in IEP (PMID:18174455) UniProt PMID:18174455 NCBI chr 3:55,465,715...55,505,263
Ensembl chr 3:55,465,715...55,490,539 		JBrowse link
G XBP1 X-box binding protein 1 involved_in IDA (PMID:11460154) UniProt PMID:11460154 NCBI chr22:28,794,560...28,800,569
Ensembl chr22:28,794,555...28,800,597 		JBrowse link
G ZC3H12A zinc finger CCCH-type containing 12A involved_in IEA
IMP
IDA		 (PMID:25861989)
(PMID:18178554), (PMID:19909337), (PMID:22055188)		 Ensembl
UniProt		 PMID:18178554 PMID:19909337 PMID:22055188 PMID:25861989 GO_REF:0000107 NCBI chr 1:37,474,580...37,484,377
Ensembl chr 1:37,474,580...37,484,377 		JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in IMP
IDA
IEA		 (PMID:14679154), (PMID:15187101)
(PMID:14766228)		 UniProt
Ensembl		 PMID:14679154 PMID:14766228 PMID:15187101 GO_REF:0000107 NCBI chr19:39,406,847...39,409,407
Ensembl chr19:39,406,847...39,409,412 		JBrowse link
cellular response to lipoteichoic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCL20 C-C motif chemokine ligand 20 ISO RGD PMID:15618187 RGD:7483631 NCBI chr 2:227,813,842...227,817,556
Ensembl chr 2:227,805,739...227,817,564 		JBrowse link
G CD14 CD14 molecule acts_upstream_of_or_within IDA (PMID:12594207) MGI PMID:12594207 NCBI chr 5:140,631,732...140,633,701
Ensembl chr 5:140,631,728...140,633,700 		JBrowse link
G CD36 CD36 molecule (CD36 blood group) involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15690042)
(PMID:16061696)		 Ensembl
MGI		 PMID:15690042 PMID:16061696 GO_REF:0000107 NCBI chr 7:80,602,207...80,679,274
Ensembl chr 7:80,369,575...80,679,277 		JBrowse link
G DEFB131A defensin beta 131A involved_in IMP (PMID:26649771) UniProt PMID:26649771 NCBI chr 4:9,444,414...9,450,666
Ensembl chr 4:9,444,414...9,450,666 		JBrowse link
G LBP lipopolysaccharide binding protein acts_upstream_of_or_within IDA (PMID:12594207) MGI PMID:12594207 NCBI chr20:38,346,482...38,377,013
Ensembl chr20:38,346,482...38,377,013 		JBrowse link
G MAPK14 mitogen-activated protein kinase 14 involved_in IMP (PMID:26649771) UniProt PMID:26649771 NCBI chr 6:36,027,808...36,124,214
Ensembl chr 6:36,027,782...36,111,236 		JBrowse link
G RELA RELA proto-oncogene, NF-kB subunit involved_in IMP (PMID:26649771) UniProt PMID:26649771 NCBI chr11:65,653,601...65,663,857
Ensembl chr11:65,653,599...65,663,090 		JBrowse link
G RIPK2 receptor interacting serine/threonine kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11894098) Ensembl
MGI		 PMID:11894098 GO_REF:0000107 NCBI chr 8:89,757,816...89,791,064
Ensembl chr 8:89,757,806...89,791,064 		JBrowse link
G TIRAP TIR domain containing adaptor protein involved_in
acts_upstream_of_or_within		 ISS
ISO		 (PMID:15690042) BHF-UCL
MGI		 PMID:15690042 GO_REF:0000024 NCBI chr11:126,283,093...126,294,933
Ensembl chr11:126,282,497...126,298,845 		JBrowse link
G TLR2 toll like receptor 2 acts_upstream_of_or_within
involved_in		 IDA
IMP		 (PMID:12594207)
(PMID:26649771)		 MGI
UniProt		 PMID:12594207 PMID:26649771 NCBI chr 4:153,684,280...153,710,637
Ensembl chr 4:153,684,070...153,706,260 		JBrowse link
G TLR4 toll like receptor 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10549626) Ensembl
MGI		 PMID:10549626 GO_REF:0000107 NCBI chr 9:117,704,403...117,724,735
Ensembl chr 9:117,704,175...117,724,735 		JBrowse link
G TREM2 triggering receptor expressed on myeloid cells 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:41,158,508...41,163,116
Ensembl chr 6:41,158,506...41,163,186 		JBrowse link
cellular response to peptidoglycan term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAMP cathelicidin antimicrobial peptide involved_in ISO
IEA		 RGD
Ensembl		 PMID:19879657 GO_REF:0000107 RGD:2316237 NCBI chr 3:48,223,495...48,225,485
Ensembl chr 3:48,223,347...48,225,491 		JBrowse link
G DEFB124 defensin beta 124 involved_in IDA
IEA
IBA		 (PMID:24955228) UniProt
TreeGrafter
GO_Central		 PMID:24955228 GO_REF:0000033 GO_REF:0000118 NCBI chr20:31,465,471...31,475,127
Ensembl chr20:31,465,471...31,476,757 		JBrowse link
G NLRP3 NLR family pyrin domain containing 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:247,416,077...247,448,817
Ensembl chr 1:247,416,156...247,449,108 		JBrowse link
G NOD2 nucleotide binding oligomerization domain containing 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:16949315) RGD
MGI
Ensembl		 PMID:16949315 PMID:24169446 GO_REF:0000107 RGD:13204728 NCBI chr16:50,693,606...50,733,075
Ensembl chr16:50,693,588...50,733,077 		JBrowse link
G RELA RELA proto-oncogene, NF-kB subunit involved_in IMP (PMID:24955228) UniProt PMID:24955228 NCBI chr11:65,653,601...65,663,857
Ensembl chr11:65,653,599...65,663,090 		JBrowse link
G RIPK2 receptor interacting serine/threonine kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11894098) Ensembl
MGI		 PMID:11894098 GO_REF:0000107 NCBI chr 8:89,757,816...89,791,064
Ensembl chr 8:89,757,806...89,791,064 		JBrowse link
G TLR2 toll like receptor 2 acts_upstream_of_or_within ISO (PMID:16949315) MGI PMID:16949315 NCBI chr 4:153,684,280...153,710,637
Ensembl chr 4:153,684,070...153,706,260 		JBrowse link
G TREM2 triggering receptor expressed on myeloid cells 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:41,158,508...41,163,116
Ensembl chr 6:41,158,506...41,163,186 		JBrowse link
cellular response to triacyl bacterial lipopeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD14 CD14 molecule involved_in IDA (PMID:16880211) UniProt PMID:16880211 NCBI chr 5:140,631,732...140,633,701
Ensembl chr 5:140,631,728...140,633,700 		JBrowse link
G TLR1 toll like receptor 1 acts_upstream_of_or_within
involved_in		 IDA
IEA
IBA		 (PMID:19931471)
(PMID:16880211)		 MGI
TreeGrafter
GO_Central
UniProt		 PMID:16880211 PMID:19931471 GO_REF:0000033 GO_REF:0000118 NCBI chr 4:38,787,569...38,805,644
Ensembl chr 4:38,790,677...38,856,817 		JBrowse link
G TLR2 toll like receptor 2 involved_in
acts_upstream_of_or_within		 IDA (PMID:16880211)
(PMID:19931471)		 UniProt
MGI		 PMID:16880211 PMID:19931471 NCBI chr 4:153,684,280...153,710,637
Ensembl chr 4:153,684,070...153,706,260 		JBrowse link
lipopolysaccharide-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKT1 AKT serine/threonine kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24740015) Ensembl
MGI		 PMID:24740015 GO_REF:0000107 NCBI chr14:104,769,349...104,795,748
Ensembl chr14:104,769,349...104,795,751 		JBrowse link
G BCL10 BCL10 immune signaling adaptor involved_in IDA (PMID:16831874) UniProt PMID:16831874 NCBI chr 1:85,265,776...85,276,632
Ensembl chr 1:85,265,776...85,276,632 		JBrowse link
G BPI bactericidal permeability increasing protein involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr20:38,304,156...38,337,505
Ensembl chr20:38,304,150...38,337,505 		JBrowse link
G CD14 CD14 molecule involved_in IEA GOC GO_REF:0000108 NCBI chr 5:140,631,732...140,633,701
Ensembl chr 5:140,631,728...140,633,700 		JBrowse link
G CD180 CD180 molecule involved_in
acts_upstream_of		 IEA
ISO		 (PMID:10880523) Ensembl
MGI		 PMID:10880523 GO_REF:0000107 NCBI chr 5:67,179,613...67,196,799
Ensembl chr 5:67,179,613...67,196,799 		JBrowse link
G CD6 CD6 molecule involved_in IDA (PMID:17601777) UniProt PMID:17601777 NCBI chr11:60,971,680...61,020,377
Ensembl chr11:60,971,680...61,020,377 		JBrowse link
G HCK HCK proto-oncogene, Src family tyrosine kinase involved_in TAS (PMID:18538446) UniProt PMID:18538446 NCBI chr20:32,052,242...32,101,856
Ensembl chr20:32,052,197...32,101,856 		JBrowse link
G IRAK1 interleukin 1 receptor associated kinase 1 involved_in
acts_upstream_of_or_within		 IMP
ISO		 (PMID:10383454)
(PMID:10549626), (PMID:12855817)		 BHF-UCL
MGI		 PMID:10383454 PMID:10549626 PMID:12855817 NCBI chr  X:154,010,507...154,019,902
Ensembl chr  X:154,010,506...154,019,902 		JBrowse link
G IRAK2 interleukin 1 receptor associated kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15082713) Ensembl
MGI		 PMID:15082713 GO_REF:0000107 NCBI chr 3:10,164,919...10,243,745
Ensembl chr 3:10,164,919...10,243,745 		JBrowse link
G IRF3 interferon regulatory factor 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12855817), (PMID:12872135) Ensembl
MGI		 PMID:12855817 PMID:12872135 GO_REF:0000107 NCBI chr19:49,659,572...49,665,857
Ensembl chr19:49,659,569...49,665,875 		JBrowse link
G LBP lipopolysaccharide binding protein involved_in IDA
IEA
IBA		 (PMID:11739189), (PMID:8409400) BHF-UCL
TreeGrafter
GO_Central		 PMID:8409400 PMID:11739189 GO_REF:0000033 GO_REF:0000118 NCBI chr20:38,346,482...38,377,013
Ensembl chr20:38,346,482...38,377,013 		JBrowse link
G LY86 lymphocyte antigen 86 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:10880523) Ensembl
MGI		 PMID:10880523 GO_REF:0000107 NCBI chr 6:6,588,720...6,654,982
Ensembl chr 6:6,588,108...6,654,983 		JBrowse link
G LY96 lymphocyte antigen 96 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:10880523) Ensembl
MGI		 PMID:10880523 GO_REF:0000107 NCBI chr 8:73,991,392...74,099,857
Ensembl chr 8:73,991,392...74,029,079 		JBrowse link
G LYN LYN proto-oncogene, Src family tyrosine kinase involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:55,879,835...56,014,169
Ensembl chr 8:55,879,835...56,014,169 		JBrowse link
G MALT1 MALT1 paracaspase involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:58,671,465...58,754,477
Ensembl chr18:58,671,465...58,754,477 		JBrowse link
G MAPK1 mitogen-activated protein kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12872135) Ensembl
MGI		 PMID:12872135 GO_REF:0000107 NCBI chr22:21,759,657...21,867,680
Ensembl chr22:21,759,657...21,867,680 		JBrowse link
G MAPK14 mitogen-activated protein kinase 14 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12872135) Ensembl
MGI		 PMID:12872135 GO_REF:0000107 NCBI chr 6:36,027,808...36,124,214
Ensembl chr 6:36,027,782...36,111,236 		JBrowse link
G MAPK3 mitogen-activated protein kinase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12872135) Ensembl
MGI		 PMID:12872135 GO_REF:0000107 NCBI chr16:30,114,105...30,123,220
Ensembl chr16:30,114,105...30,123,506 		JBrowse link
G MTDH metadherin involved_in IMP (PMID:19740331) UniProt PMID:19740331 NCBI chr 8:97,644,184...97,730,260
Ensembl chr 8:97,644,184...97,730,260 		JBrowse link
G MYD88 MYD88 innate immune signal transduction adaptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12855817) Ensembl
MGI		 PMID:12855817 GO_REF:0000107 NCBI chr 3:38,138,661...38,143,022
Ensembl chr 3:38,138,552...38,143,024 		JBrowse link
G NFKBIA NFKB inhibitor alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12872135), (PMID:18261938) Ensembl
MGI		 PMID:12872135 PMID:18261938 GO_REF:0000107 NCBI chr14:35,401,513...35,404,749
Ensembl chr14:35,401,079...35,404,749 		JBrowse link
G NOS3 nitric oxide synthase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15647265) Ensembl
MGI		 PMID:15647265 GO_REF:0000107 NCBI chr 7:150,991,017...151,014,588
Ensembl chr 7:150,991,017...151,014,588 		JBrowse link
G NR2C2 nuclear receptor subfamily 2 group C member 2 acts_upstream_of_or_within ISO (PMID:9851930) MGI PMID:9851930 NCBI chr 3:14,947,583...15,049,273
Ensembl chr 3:14,947,583...15,053,600 		JBrowse link
G PLCG2 phospholipase C gamma 2 involved_in IMP (PMID:32514138) ARUK-UCL PMID:32514138 NCBI chr16:81,779,291...81,962,685
Ensembl chr16:81,779,279...81,962,685 		JBrowse link
G PRKCE protein kinase C epsilon involved_in
acts_upstream_of_or_within		 IEA
ISO
ISS		 (PMID:11696589) Ensembl
MGI
UniProt		 PMID:11696589 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:45,651,279...46,187,990
Ensembl chr 2:45,651,345...46,187,990 		JBrowse link
G PTAFR platelet activating factor receptor involved_in IEA GOC GO_REF:0000108 NCBI chr 1:28,147,166...28,193,856
Ensembl chr 1:28,147,166...28,193,936 		JBrowse link
G PTPN22 protein tyrosine phosphatase non-receptor type 22 involved_in IMP (PMID:23991106) UniProt PMID:23991106 NCBI chr 1:113,813,811...113,871,759
Ensembl chr 1:113,813,811...113,871,753 		JBrowse link
G RIPK2 receptor interacting serine/threonine kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11894098) Ensembl
MGI		 PMID:11894098 GO_REF:0000107 NCBI chr 8:89,757,816...89,791,064
Ensembl chr 8:89,757,806...89,791,064 		JBrowse link
G SCARB1 scavenger receptor class B member 1 involved_in IEA GOC GO_REF:0000108 NCBI chr12:124,776,856...124,863,864
Ensembl chr12:124,776,856...124,882,668 		JBrowse link
G SPI1 Spi-1 proto-oncogene involved_in ISO (MGI:6459415|PMID:30718772) ARUK-UCL PMID:30718772 MGI:6459415 NCBI chr11:47,354,860...47,378,547
Ensembl chr11:47,354,860...47,409,369 		JBrowse link
G STAT1 signal transducer and activator of transcription 1 acts_upstream_of_or_within ISO (PMID:12872135) MGI PMID:12872135 NCBI chr 2:190,969,149...191,014,171
Ensembl chr 2:190,908,460...191,020,960 		JBrowse link
G TICAM1 TIR domain containing adaptor molecule 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:12855817)
(PMID:12872135)		 Ensembl
MGI
GO_Central
TreeGrafter		 PMID:12855817 PMID:12872135 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr19:4,815,932...4,831,712
Ensembl chr19:4,815,932...4,831,712 		JBrowse link
G TICAM2 TIR domain containing adaptor molecule 2 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 5:115,578,496...115,602,479
Ensembl chr 5:115,578,496...115,602,479 		JBrowse link
G TIFAB TIFA inhibitor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26458771) Ensembl
MGI		 PMID:26458771 GO_REF:0000107 NCBI chr 5:135,444,226...135,452,351
Ensembl chr 5:135,444,226...135,452,351 		JBrowse link
G TLR2 toll like receptor 2 involved_in IEA GOC GO_REF:0000108 NCBI chr 4:153,684,280...153,710,637
Ensembl chr 4:153,684,070...153,706,260 		JBrowse link
G TLR4 toll like receptor 4 involved_in
NOT|acts_upstream_of_or_within		 ISO
IDA
IGI		 (MGI:5913054|PMID:28098138)
(PMID:10880523)		 UniProt
MGI		 PMID:10880523 PMID:28098138 MGI:5913054 NCBI chr 9:117,704,403...117,724,735
Ensembl chr 9:117,704,175...117,724,735 		JBrowse link
G TMED7-TICAM2 TMED7-TICAM2 readthrough involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 5:115,578,496...115,626,036
Ensembl chr 5:115,578,642...115,626,161 		JBrowse link
G TRAF6 TNF receptor associated factor 6 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:26458771) Ensembl
MGI
TreeGrafter
GO_Central		 PMID:26458771 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr11:36,483,769...36,510,272
Ensembl chr11:36,483,769...36,510,272 		JBrowse link
negative regulation of lipopolysaccharide-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CACTIN cactin, spliceosome C complex subunit involved_in IMP (PMID:20829348) UniProt PMID:20829348 NCBI chr19:3,610,645...3,626,790
Ensembl chr19:3,610,645...3,626,815 		JBrowse link
G CARD16 caspase recruitment domain family member 16 involved_in IDA (PMID:11432859) UniProt PMID:11432859 NCBI chr11:105,041,563...105,045,335
Ensembl chr11:105,041,326...105,101,431 		JBrowse link
G CARD8 caspase recruitment domain family member 8 involved_in IDA (PMID:11821383) UniProt PMID:11821383 NCBI chr19:48,179,825...48,255,946
Ensembl chr19:48,180,770...48,255,946 		JBrowse link
G DEFB114 defensin beta 114 involved_in IDA (PMID:23482568) UniProt PMID:23482568 NCBI chr 6:49,960,249...49,964,164
Ensembl chr 6:49,960,249...49,964,164 		JBrowse link
G DEFB118 defensin beta 118 involved_in IDA (PMID:33181266) UniProt PMID:33181266 NCBI chr20:31,368,601...31,373,923
Ensembl chr20:31,368,601...31,373,923 		JBrowse link
G LACRT lacritin involved_in IDA (PMID:26670139) FlyBase PMID:26670139 NCBI chr12:54,630,811...54,634,895
Ensembl chr12:54,630,811...54,634,895 		JBrowse link
G LILRA2 leukocyte immunoglobulin like receptor A2 involved_in IMP (PMID:22479404) UniProt PMID:22479404 NCBI chr19:54,572,988...54,590,287
Ensembl chr19:54,572,920...54,590,287 		JBrowse link
G LTF lactotransferrin involved_in IDA (PMID:20345905) UniProt PMID:20345905 NCBI chr 3:46,435,645...46,485,234
Ensembl chr 3:46,435,645...46,485,234 		JBrowse link
G NFKBIL1 NFKB inhibitor like 1 involved_in IDA (PMID:20829348) UniProt PMID:20829348 NCBI chr 6:31,546,851...31,558,829
Ensembl chr 6:31,546,870...31,558,829 		JBrowse link
G PRDX2 peroxiredoxin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17325201) Ensembl
MGI		 PMID:17325201 GO_REF:0000107 NCBI chr19:12,796,823...12,801,800
Ensembl chr19:12,796,820...12,801,800 		JBrowse link
G SIGIRR single Ig and TIR domain containing involved_in TAS (PMID:15866876) HGNC-UCL PMID:15866876 NCBI chr11:405,716...417,397
Ensembl chr11:405,716...417,455 		JBrowse link
G TRIB1 tribbles pseudokinase 1 involved_in IMP (PMID:17452330) BHF-UCL PMID:17452330 NCBI chr 8:125,430,358...125,438,403
Ensembl chr 8:125,430,358...125,438,403 		JBrowse link
positive regulation of lipopolysaccharide-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP6 bone morphogenetic protein 6 involved_in ISS
IEA		 BHF-UCL
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:7,726,099...7,881,728
Ensembl chr 6:7,726,099...7,881,728 		JBrowse link
G CD14 CD14 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:140,631,732...140,633,701
Ensembl chr 5:140,631,728...140,633,700 		JBrowse link
G CD180 CD180 molecule acts_upstream_of_or_within
involved_in		 IGI
IBA
IEA		 (PMID:10880523) MGI
GO_Central
TreeGrafter
Ensembl		 PMID:10880523 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:67,179,613...67,196,799
Ensembl chr 5:67,179,613...67,196,799 		JBrowse link
G LY86 lymphocyte antigen 86 involved_in
acts_upstream_of_or_within		 IEA
IBA
IGI		 (PMID:10880523) Ensembl
TreeGrafter
GO_Central
MGI		 PMID:10880523 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:6,588,720...6,654,982
Ensembl chr 6:6,588,108...6,654,983 		JBrowse link
G LY96 lymphocyte antigen 96 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:10880523) Ensembl
MGI
TreeGrafter
GO_Central		 PMID:10880523 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:73,991,392...74,099,857
Ensembl chr 8:73,991,392...74,029,079 		JBrowse link
G MIF macrophage migration inhibitory factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:23,894,383...23,895,223
Ensembl chr22:23,894,383...23,895,227 		JBrowse link
G PRKCA protein kinase C alpha involved_in IMP (PMID:9830023) UniProt PMID:9830023 NCBI chr17:66,302,613...66,810,743
Ensembl chr17:66,302,613...66,810,743 		JBrowse link
G SASH1 SAM and SH3 domain containing 1 acts_upstream_of_or_within IMP (PMID:23776175) MGI PMID:23776175 NCBI chr 6:148,193,468...148,552,044
Ensembl chr 6:148,272,304...148,552,044 		JBrowse link
G SCIMP SLP adaptor and CSK interacting membrane protein involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr17:5,208,920...5,234,860
Ensembl chr17:5,208,920...5,234,860 		JBrowse link
G TRAF6 TNF receptor associated factor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:36,483,769...36,510,272
Ensembl chr11:36,483,769...36,510,272 		JBrowse link
regulation of lipopolysaccharide-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD36 CD36 molecule (CD36 blood group) involved_in TAS (PMID:29111364) ARUK-UCL PMID:29111364 NCBI chr 7:80,602,207...80,679,274
Ensembl chr 7:80,369,575...80,679,277 		JBrowse link
G CD55 CD55 molecule (Cromer blood group) involved_in IDA (PMID:12731067) UniProt PMID:12731067 NCBI chr 1:207,321,678...207,360,966
Ensembl chr 1:207,321,519...207,386,804 		JBrowse link
G CD84 CD84 molecule involved_in ISO (MGI:5700297|PMID:20628063) UniProt PMID:20628063 MGI:5700297 NCBI chr 1:160,541,098...160,579,496
Ensembl chr 1:160,541,095...160,579,516 		JBrowse link
G CX3CL1 C-X3-C motif chemokine ligand 1 involved_in IDA (PMID:10652441) ARUK-UCL PMID:10652441 NCBI chr16:57,372,490...57,385,044
Ensembl chr16:57,372,477...57,385,044 		JBrowse link
G TRIM5 tripartite motif containing 5 involved_in IMP (PMID:21512573) UniProt PMID:21512573 NCBI chr11:5,588,635...5,685,074
Ensembl chr11:5,663,195...5,938,619 		JBrowse link
G TUT4 terminal uridylyl transferase 4 acts_upstream_of_or_within ISO (PMID:16643855) MGI PMID:16643855 NCBI chr 1:52,423,275...52,553,463
Ensembl chr 1:52,408,282...52,553,487 		JBrowse link
tolerance induction to lipopolysaccharide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACOD1 aconitate decarboxylase 1 involved_in IDA (PMID:23609450) UniProt PMID:23609450 NCBI chr13:76,948,511...76,958,638
Ensembl chr13:76,948,511...76,958,638 		JBrowse link
G TNFAIP3 TNF alpha induced protein 3 involved_in IMP (PMID:21220427) BHF-UCL PMID:21220427 NCBI chr 6:137,866,349...137,883,312
Ensembl chr 6:137,867,214...137,883,314 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19770
    cellular process 18460
      cellular response to stimulus 8436
        cellular response to biotic stimulus 406
          cellular response to molecule of bacterial origin 375
            cellular response to bacterial lipoprotein + 12
            cellular response to lipopolysaccharide + 359
            cellular response to lipoteichoic acid 12
            cellular response to peptidoglycan 8
Path 2
Term Annotations click to browse term
  biological_process 19770
    response to stimulus 10237
      response to biotic stimulus 2016
        response to external biotic stimulus 1970
          response to other organism 1967
            response to bacterium 1054
              response to molecule of bacterial origin 595
                cellular response to molecule of bacterial origin 375
                  cellular response to bacterial lipoprotein + 12
                  cellular response to lipopolysaccharide + 359
                  cellular response to lipoteichoic acid 12
                  cellular response to peptidoglycan 8
paths to the root