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ONTOLOGY REPORT - ANNOTATIONS


Term:histone pre-mRNA 3'end processing complex
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Accession:GO:0071204 term browser browse the term
Definition:A ribonucleoprotein that binds to specific sites in, and is required for cleavage of, the 3'-end of histone pre-mRNAs. The complex contains the U7 snRNP and additional proteins, including the stem-loop binding protein (SLBP) and the exonuclease 3'hExo/Eri-1.
Synonyms:exact_synonym: histone 3'end pre-mRNA complex


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histone pre-mRNA 3'end processing complex term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eri1 exoribonuclease 1 ISO
ISS
(MGI:MGI:4353869|PMID:19470752)
GO_REF:0000024
RGD
UniProt
PMID:19470752 GO_REF:0000024, MGI:MGI:4353869 NCBI chr16:60,307,148...60,327,237
Ensembl chr16:60,307,148...60,327,236
JBrowse link
G LOC100363294 stem-loop binding protein-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:27,550,426...27,557,699
Ensembl chr18:27,554,062...27,557,699
JBrowse link
G LOC100912427 nuclease-sensitive element-binding protein 1-like ISO (MGI:MGI:4353869|PMID:19470752) RGD PMID:19470752 MGI:MGI:4353869 NCBI chr 1:186,635,408...186,641,503
Ensembl chr 1:186,640,425...186,641,393
JBrowse link
G Lsm11 LSM11, U7 small nuclear RNA associated ISO (MGI:MGI:4353869|PMID:19470752) RGD PMID:19470752 MGI:MGI:4353869 NCBI chr10:31,023,561...31,041,700
Ensembl chr10:31,028,697...31,041,626
JBrowse link
G Slbp stem-loop binding protein ISO
IBA
(MGI:MGI:4353869|PMID:19470752)
PMID:21873635
RGD PMID:19470752, PMID:21873635 MGI:MGI:4353869, RGD:13792537 NCBI chr14:82,356,916...82,366,368
Ensembl chr14:82,356,916...82,366,368
JBrowse link
G Snrpb small nuclear ribonucleoprotein polypeptides B and B1 ISO (MGI:MGI:4353869|PMID:19470752) RGD PMID:19470752 MGI:MGI:4353869 NCBI chr 3:122,696,125...122,703,734
Ensembl chr 3:122,695,939...122,703,734
JBrowse link
G Syncrip synaptotagmin binding, cytoplasmic RNA interacting protein IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:4353869|PMID:19470752)
Ensembl
UniProt
RGD
PMID:19470752 GO_REF:0000024, GO_REF:0000107, MGI:MGI:4353869 NCBI chr 8:96,100,692...96,266,342
Ensembl chr 8:96,105,025...96,266,342
JBrowse link
G Ybx1 Y box binding protein 1 ISS
IEA
GO_REF:0000024
GO_REF:0000107
UniProt
Ensembl
GO_REF:0000024, GO_REF:0000107 NCBI chr 5:138,319,754...138,336,721
Ensembl chr 5:138,319,762...138,336,475
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20610
    protein-containing complex 6104
      ribonucleoprotein complex 1312
        histone pre-mRNA 3'end processing complex 8
Path 2
Term Annotations click to browse term
  cellular_component 20610
    cellular anatomical entity 20359
      organelle 13271
        membrane-bounded organelle 11249
          intracellular membrane-bounded organelle 10505
            nucleus 6974
              histone pre-mRNA 3'end processing complex 8
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.