ONTOLOGY REPORT - ANNOTATIONS |
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Term: | protein localization to chromatin |
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Accession: | GO:0071168
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browse the term
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Definition: | Any process in which a protein is transported to, or maintained at, a part of a chromosome that is organized into chromatin. |
Synonyms: | exact_synonym: | protein localisation to chromatin |
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Carm1 |
coactivator-associated arginine methyltransferase 1 |
acts_upstream_of_or_within |
ISO |
(MGI:3613433|PMID:15616592) |
RGD |
PMID:15616592 |
MGI:3613433 |
NCBI chr 8:20,097,262...20,141,950
Ensembl chr 8:20,097,254...20,147,689
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Chmp7 |
charged multivesicular body protein 7 |
involved_in |
ISO |
(PMID:28242692) |
RGD |
PMID:28242692 |
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NCBI chr15:44,790,983...44,806,216
Ensembl chr15:44,790,996...44,806,216
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Daxx |
death-domain associated protein |
involved_in |
ISO |
UniProtKB:Q60953 (MGI:5882889|PMID:17081986) |
RGD |
PMID:17081986 |
MGI:5882889 |
NCBI chr20:4,970,090...4,976,145
Ensembl chr20:4,970,092...4,975,843
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Esco2 |
establishment of sister chromatid cohesion N-acetyltransferase 2 |
acts_upstream_of_or_within |
ISO |
MGI:5308063 (MGI:5306174|PMID:22101327) |
RGD |
PMID:22101327 |
MGI:5306174 |
NCBI chr15:40,034,566...40,052,295
Ensembl chr15:40,034,568...40,055,306
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Esr1 |
estrogen receptor 1 |
involved_in |
ISO IEA |
(PMID:20388878) GO_REF:0000107 |
RGD Ensembl |
PMID:20388878 |
GO_REF:0000107 |
NCBI chr 1:41,106,335...41,499,104
Ensembl chr 1:41,210,475...41,495,002
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Ezh2 |
enhancer of zeste 2 polycomb repressive complex 2 subunit |
acts_upstream_of_or_within |
ISO |
MGI:3805309 (MGI:3788959|PMID:18311137) |
RGD |
PMID:18311137 |
MGI:3788959 |
NCBI chr 4:76,624,399...76,687,362
Ensembl chr 4:76,624,399...76,687,362
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Fam47a |
family with sequence similarity 47, member A |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr X:42,762,231...42,763,887
Ensembl chr X:42,762,229...42,763,883
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Fam47e |
family with sequence similarity 47, member E |
involved_in |
ISO |
(PMID:33376131) |
RGD |
PMID:33376131 |
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NCBI chr14:15,485,537...15,521,599
Ensembl chr14:15,485,127...15,521,775
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Lef1 |
lymphoid enhancer binding factor 1 |
involved_in |
ISO |
(PMID:20363964) |
RGD |
PMID:20363964 |
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NCBI chr 2:219,666,549...219,779,815
Ensembl chr 2:219,666,592...219,779,794
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Lemd2 |
LEM domain nuclear envelope protein 2 |
involved_in |
ISO |
(PMID:28242692) |
RGD |
PMID:28242692 |
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NCBI chr20:5,282,397...5,296,621
Ensembl chr20:5,282,397...5,296,626
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LOC102552474 |
protein FAM47E-like |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr X:13,775,705...13,777,481
Ensembl chr X:13,776,114...13,777,409
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Mcm8 |
minichromosome maintenance 8 homologous recombination repair factor |
involved_in |
ISO |
(PMID:23401855) |
RGD |
PMID:23401855 |
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NCBI chr 3:120,086,741...120,117,008
Ensembl chr 3:120,086,763...120,117,008
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Mcm9 |
minichromosome maintenance 9 homologous recombination repair factor |
involved_in |
ISO |
(PMID:23401855), (PMID:26300262) |
RGD |
PMID:23401855 PMID:26300262 |
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NCBI chr20:32,818,219...32,929,577
Ensembl chr20:32,844,951...32,929,600
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Mrnip |
MRN complex interacting protein |
involved_in |
ISO |
(PMID:27568553) |
RGD |
PMID:27568553 |
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NCBI chr10:34,501,359...34,525,474
Ensembl chr10:34,501,384...34,525,469
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Msh2 |
mutS homolog 2 |
involved_in |
ISO IEA |
(PMID:26300262) GO_REF:0000107 |
RGD Ensembl |
PMID:26300262 |
GO_REF:0000107 |
NCBI chr 6:6,813,793...6,872,960
Ensembl chr 6:6,813,795...6,872,938
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Plk1 |
polo-like kinase 1 |
involved_in |
IEA ISO ISS |
GO_REF:0000107 (PMID:21111234) GO_REF:0000024 |
Ensembl RGD UniProt |
PMID:21111234 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 1:176,716,420...176,726,400
Ensembl chr 1:176,716,420...176,726,400
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Rad21 |
RAD21 cohesin complex component |
involved_in |
ISO |
(PMID:21111234) |
RGD |
PMID:21111234 |
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NCBI chr 7:83,287,867...83,314,810
Ensembl chr 7:83,287,870...83,314,817
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Wapl |
WAPL cohesin release factor |
involved_in |
ISO |
(PMID:21111234) |
RGD |
PMID:21111234 |
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NCBI chr16:10,005,520...10,075,270
Ensembl chr16:10,004,941...10,073,510
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Zmynd8 |
zinc finger, MYND-type containing 8 |
involved_in |
ISO |
(PMID:25593309) |
RGD |
PMID:25593309 |
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NCBI chr 3:154,528,917...154,629,532
Ensembl chr 3:154,529,043...154,628,463
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Mau2 |
MAU2 sister chromatid cohesion factor |
involved_in |
ISO |
(PMID:22628566) |
RGD |
PMID:22628566 |
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NCBI chr16:19,383,847...19,414,996
Ensembl chr16:19,383,492...19,408,727
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Nipbl |
NIPBL, cohesin loading factor |
involved_in |
ISO |
(PMID:22628566) (MGI:6102971|PMID:29094699) |
RGD |
PMID:22628566 PMID:29094699 |
MGI:6102971 |
NCBI chr 2:57,399,443...57,586,770
Ensembl chr 2:57,399,445...57,565,899
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Ctcfl |
CCCTC-binding factor like |
involved_in |
ISO |
(PMID:18765639) |
RGD |
PMID:18765639 |
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NCBI chr 3:161,868,306...161,890,949
Ensembl chr 3:161,868,306...161,890,949
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H1f5 |
H1.5 linker histone, cluster member |
involved_in |
ISO |
(PMID:22956909) |
RGD |
PMID:22956909 |
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NCBI chr17:42,726,189...42,726,857
Ensembl chr17:42,726,127...42,769,160
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Lrwd1 |
leucine-rich repeats and WD repeat domain containing 1 |
involved_in |
ISO IBA |
(PMID:20932478) PMID:21873635 |
RGD |
PMID:20932478 PMID:21873635 |
RGD:13792537 |
NCBI chr12:20,530,072...20,543,078
Ensembl chr12:20,530,012...20,549,536
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Macroh2a1 |
macroH2A.1 histone |
involved_in |
ISO |
(PMID:19734898) |
RGD |
PMID:19734898 |
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NCBI chr17:8,479,331...8,542,071
Ensembl chr17:8,479,372...8,542,072
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Macroh2a2 |
macroH2A.2 histone |
involved_in |
ISO |
(PMID:19734898) |
RGD |
PMID:19734898 |
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NCBI chr20:29,678,194...29,727,867
Ensembl chr20:29,678,222...29,727,891
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Mir208b |
microRNA 208b |
acts_upstream_of_or_within |
ISO |
(MGI:5576864|PMID:24137001) |
RGD |
PMID:24137001 |
MGI:5576864 |
NCBI chr15:28,451,638...28,451,749
Ensembl chr15:28,451,638...28,451,749
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Nipbl |
NIPBL, cohesin loading factor |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 2:57,399,443...57,586,770
Ensembl chr 2:57,399,445...57,565,899
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Pih1d1 |
PIH1 domain containing 1 |
involved_in |
ISO |
(PMID:22368283) |
RGD |
PMID:22368283 |
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NCBI chr 1:95,639,597...95,645,295
Ensembl chr 1:95,639,592...95,645,290
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Ruvbl2 |
RuvB-like AAA ATPase 2 |
involved_in |
ISO |
(PMID:23637611) |
RGD |
PMID:23637611 |
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NCBI chr 1:95,902,014...95,915,364
Ensembl chr 1:95,901,701...95,915,342
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Wbp2 |
WW domain binding protein 2 |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:23233354) |
Ensembl RGD |
PMID:23233354 |
GO_REF:0000107 |
NCBI chr10:101,312,476...101,320,775
Ensembl chr10:101,312,446...101,320,736
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Nipbl |
NIPBL, cohesin loading factor |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr 2:57,399,443...57,586,770
Ensembl chr 2:57,399,445...57,565,899
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Spi1 |
Spi-1 proto-oncogene |
involved_in |
ISO |
(MGI:6381024|PMID:30911105) |
RGD |
PMID:30911105 |
MGI:6381024 |
NCBI chr 3:77,059,744...77,093,730
Ensembl chr 3:77,073,012...77,092,393
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Cdk9 |
cyclin-dependent kinase 9 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:29335245) |
UniProt RGD |
PMID:29335245 |
GO_REF:0000024 |
NCBI chr 3:15,996,467...16,001,315
Ensembl chr 3:15,996,468...16,002,410
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Sirt6 |
sirtuin 6 |
involved_in |
ISO |
(MGI:6357632|PMID:31399344) |
RGD |
PMID:31399344 |
MGI:6357632 |
NCBI chr 7:8,082,312...8,087,776
Ensembl chr 7:8,082,364...8,098,914
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Vrk1 |
VRK serine/threonine kinase 1 |
involved_in |
ISO |
(PMID:33076429) |
RGD |
PMID:33076429 |
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NCBI chr 6:124,914,770...124,981,508
Ensembl chr 6:124,914,855...124,981,436
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Pphln1 |
periphilin 1 |
involved_in |
IBA ISO |
PMID:21873635 (PMID:28581500) |
RGD |
PMID:28581500 PMID:21873635 |
RGD:13792537 |
NCBI chr 7:124,538,594...124,629,985
Ensembl chr 7:124,538,627...124,629,985
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Tasor |
transcription activation suppressor |
involved_in |
ISO IBA |
(PMID:28581500) PMID:21873635 |
RGD |
PMID:28581500 PMID:21873635 |
RGD:13792537 |
NCBI chr16:2,606,807...2,669,902
Ensembl chr16:2,603,936...2,667,292
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Jarid2 |
jumonji and AT-rich interaction domain containing 2 |
acts_upstream_of_or_within |
ISO |
MGI:5888989 (MGI:5888829|PMID:27892467) |
RGD |
PMID:27892467 |
MGI:5888829 |
NCBI chr17:19,777,487...19,957,696
Ensembl chr17:19,777,266...19,955,690
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Cdca5 |
cell division cycle associated 5 |
involved_in |
IBA ISO |
PMID:21873635 (PMID:17349791) |
RGD |
PMID:17349791 PMID:21873635 |
RGD:13792537 |
NCBI chr 1:203,378,550...203,392,027
Ensembl chr 1:203,378,577...203,392,023
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Hdac8 |
histone deacetylase 8 |
involved_in |
ISO |
(PMID:22885700) |
RGD |
PMID:22885700 |
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NCBI chr X:67,385,288...67,593,014
Ensembl chr X:67,385,289...67,592,923
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Rb1 |
RB transcriptional corepressor 1 |
involved_in |
ISO |
(PMID:20551165) |
RGD |
PMID:20551165 |
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NCBI chr15:48,371,295...48,502,473
Ensembl chr15:48,371,296...48,502,302
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Wapl |
WAPL cohesin release factor |
involved_in acts_upstream_of_or_within |
ISO IBA |
(PMID:17113138) PMID:21873635 MGI:5551791|MGI:5551807 (MGI:5544860|PMID:23975099) |
RGD |
PMID:17113138 PMID:23975099 PMID:21873635 |
MGI:5544860, RGD:13792537 |
NCBI chr16:10,005,520...10,075,270
Ensembl chr16:10,004,941...10,073,510
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Setd2 |
SET domain containing 2, histone lysine methyltransferase |
involved_in |
ISO |
(PMID:24843002) |
RGD |
PMID:24843002 |
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NCBI chr 8:110,511,808...110,597,489
Ensembl chr 8:110,511,772...110,597,489
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Vcp |
valosin-containing protein |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:32152270) |
UniProt RGD |
PMID:32152270 |
GO_REF:0000024 |
NCBI chr 5:57,210,167...57,229,571
Ensembl chr 5:57,210,168...57,229,571
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Vcpip1 |
valosin containing protein interacting protein 1 |
involved_in |
ISO ISS |
(PMID:32649882) GO_REF:0000024 |
RGD UniProt |
PMID:32649882 |
GO_REF:0000024 |
NCBI chr 5:9,534,247...9,560,889
Ensembl chr 5:9,534,129...9,562,040
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Term paths to the root
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