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ONTOLOGY REPORT - ANNOTATIONS


Term:TRAMP-dependent tRNA surveillance pathway
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Accession:GO:0071038 term browser browse the term
Definition:A nuclear tRNA surveillance pathway, dependent on the TRAMP exosome adaptor and the nuclear exosome.



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TRAMP-dependent tRNA surveillance pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Exosc10 exosome component 10 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:164,278,414...164,302,067 JBrowse link
G Exosc2 exosome component 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:14,962,930...14,973,645 JBrowse link
G Exosc3 exosome component 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:64,369,495...64,374,711 JBrowse link
G Exosc7 exosome component 7 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:122,773,607...122,798,943 JBrowse link
G Exosc8 exosome component 8 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:138,930,405...138,937,009 JBrowse link
G Exosc9 exosome component 9 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:121,344,154...121,355,110 JBrowse link
G Zcchc7 zinc finger CCHC-type containing 7 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:58,992,558...59,173,308 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20534
    cellular process 19523
      metabolic process 12157
        macromolecule metabolic process 9981
          nucleic acid metabolic process 5329
            RNA metabolic process 4747
              RNA catabolic process 391
                RNA surveillance 18
                  nuclear RNA surveillance 15
                    TRAMP-dependent tRNA surveillance pathway 7
Path 2
Term Annotations click to browse term
  biological_process 20534
    cellular process 19523
      metabolic process 12157
        primary metabolic process 10741
          nucleobase-containing compound metabolic process 5945
            nucleic acid metabolic process 5329
              nucleic acid catabolic process 421
                RNA catabolic process 391
                  RNA surveillance 18
                    tRNA surveillance 8
                      TRAMP-dependent tRNA surveillance pathway 7
paths to the root