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ONTOLOGY REPORT - ANNOTATIONS

Term:neutrophil-mediated killing of bacterium
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Accession:GO:0070944 term browser browse the term
Definition:The directed killing of a bacterium by a neutrophil.

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neutrophil-mediated killing of bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myd88 MYD88 innate immune signal transduction adaptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22419116) Ensembl
MGI		 PMID:22419116 GO_REF:0000107 NCBI chrNW_004936473:27,672,237...27,676,339
Ensembl chrNW_004936473:27,671,797...27,676,372 		JBrowse link
G Scnn1b sodium channel epithelial 1 subunit beta involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22419116) Ensembl
MGI		 PMID:22419116 GO_REF:0000107 NCBI chrNW_004936501:8,021,090...8,065,245
Ensembl chrNW_004936501:8,020,316...8,065,332 		JBrowse link
neutrophil-mediated killing of gram-negative bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dao D-amino acid oxidase involved_in ISO (PMID:25425233)
(MGI:7581102|PMID:25425233)		 UniProt PMID:25425233 MGI:7581102 NCBI chrNW_004936769:744,862...758,086
Ensembl chrNW_004936769:744,864...758,452 		JBrowse link
G F2 coagulation factor II, thrombin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936562:2,371,725...2,388,617
Ensembl chrNW_004936562:2,372,044...2,388,650 		JBrowse link
G LOC101954594 triggering receptor expressed on myeloid cells 3-like involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936476:18,587,461...18,592,750 JBrowse link
G LOC101961846 neutrophil elastase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:345,678...347,420
Ensembl chrNW_004936588:345,678...347,413 		JBrowse link
G Trem1 triggering receptor expressed on myeloid cells 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23241959) TreeGrafter
MGI		 PMID:23241959 GO_REF:0000118 NCBI chrNW_004936476:18,577,825...18,583,675
Ensembl chrNW_004936476:18,574,381...18,583,647 		JBrowse link
G TUSC2 tumor suppressor 2, mitochondrial calcium regulator involved_in IEA Ensembl GO_REF:0000107 Ensembl chrNW_004936529:1,853,120...1,856,637 JBrowse link
neutrophil-mediated killing of gram-positive bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101959956 cathepsin G-like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936722:34,410...37,097
Ensembl chrNW_004936722:34,392...37,097 		JBrowse link
G Ncf1 neutrophil cytosolic factor 1 acts_upstream_of_or_within ISO (PMID:11907569) MGI PMID:11907569 NCBI chrNW_004936543:3,617,369...3,630,990
Ensembl chrNW_004936543:3,617,372...3,630,997 		JBrowse link
G Nlrp6 NLR family pyrin domain containing 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:30248149) Ensembl
MGI		 PMID:30248149 GO_REF:0000107 NCBI chrNW_004936888:145,642...151,716
Ensembl chrNW_004936888:145,642...151,182 		JBrowse link
positive regulation of neutrophil mediated killing of gram-negative bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G F2rl1 F2R like trypsin receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936549:142,281...153,575
Ensembl chrNW_004936549:141,512...153,602 		JBrowse link
regulation of neutrophil mediated killing of gram-negative bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101954938 C-X-C motif chemokine 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936598:1,729,263...1,729,840
Ensembl chrNW_004936598:1,728,861...1,729,843 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15969
    biological process involved in interspecies interaction between organisms 1531
      response to other organism 1404
        defense response to other organism 974
          defense response to bacterium 246
            neutrophil-mediated killing of bacterium 13
              negative regulation of neutrophil mediated killing of bacterium + 0
              neutrophil-mediated killing of gram-negative bacterium + 8
              neutrophil-mediated killing of gram-positive bacterium + 3
              positive regulation of neutrophil mediated killing of bacterium + 1
              regulation of neutrophil mediated killing of bacterium + 2
Path 2
Term Annotations click to browse term
  biological_process 15969
    response to stimulus 8553
      response to biotic stimulus 1451
        response to external biotic stimulus 1408
          response to other organism 1404
            defense response to other organism 974
              defense response to symbiont 856
                killing by host of symbiont cells 20
                  neutrophil-mediated killing of symbiont cell 14
                    neutrophil-mediated killing of bacterium 13
                      negative regulation of neutrophil mediated killing of bacterium + 0
                      neutrophil-mediated killing of gram-negative bacterium + 8
                      neutrophil-mediated killing of gram-positive bacterium + 3
                      positive regulation of neutrophil mediated killing of bacterium + 1
                      regulation of neutrophil mediated killing of bacterium + 2
paths to the root