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ONTOLOGY REPORT - ANNOTATIONS


Term:dephosphorylation of RNA polymerase II C-terminal domain
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Accession:GO:0070940 term browser browse the term
Definition:The process of removing a phosphate group from an amino acid residue in the C-terminal domain of RNA polymerase II. Some dephosphorylation occurs during transcription while some may occur after the enzyme is released from the template in order to prepare it for the beginning of the transcription cycle again. RNA polymerase II with little or no phosphorylation is referred to as the hypophosphorylated or II(A) form.
Synonyms:exact_synonym: CTD domain dephosphorylation of RNA polymerase II;   generation of II(A) form of RNA polymerase II;   generation of hypophosphorylated CTD of RNA polymerase II


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dephosphorylation of RNA polymerase II C-terminal domain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctdp1 CTD phosphatase subunit 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:76,922,913...76,985,095
Ensembl chr18:76,922,934...76,984,203
JBrowse link
G Rpap2 RNA polymerase II associated protein 2 involved_in IBA
ISO
ISS
PMID:21873635
(PMID:22137580)
GO_REF:0000024
RGD
UniProt
PMID:22137580, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr14:3,125,595...3,204,590
Ensembl chr14:3,124,622...3,204,588
JBrowse link
G Rprd1a regulation of nuclear pre-mRNA domain containing 1A involved_in ISO (PMID:22231121) RGD PMID:22231121 NCBI chr18:16,450,160...16,497,913
Ensembl chr18:16,453,369...16,497,886
JBrowse link
G Rprd1b regulation of nuclear pre-mRNA domain containing 1B involved_in ISO (PMID:22231121) RGD PMID:22231121 NCBI chr 3:154,507,029...154,553,312
Ensembl chr 3:154,507,035...154,553,312
JBrowse link
G Ssu72 SSU72 homolog, RNA polymerase II CTD phosphatase involved_in ISO
ISS
IBA
(PMID:20861839)
GO_REF:0000024
PMID:21873635
RGD
UniProt
PMID:20861839, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 5:173,152,964...173,182,720
Ensembl chr 5:173,152,964...173,182,719
JBrowse link

Term paths to the root
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Term Annotations click to browse term
  biological_process 19634
    metabolic process 11911
      cellular metabolic process 10866
        phosphorus metabolic process 2929
          phosphate-containing compound metabolic process 2907
            dephosphorylation 493
              protein dephosphorylation 316
                dephosphorylation of RNA polymerase II C-terminal domain 5
Path 2
Term Annotations click to browse term
  biological_process 19634
    metabolic process 11911
      cellular metabolic process 10866
        cellular aromatic compound metabolic process 5616
          nucleobase-containing compound metabolic process 5404
            nucleic acid metabolic process 4915
              RNA metabolic process 4400
                RNA biosynthetic process 3419
                  nucleic acid-templated transcription 3404
                    transcription, DNA-templated 3402
                      regulation of transcription, DNA-templated 3271
                        regulation of transcription by RNA polymerase II 2387
                          dephosphorylation of RNA polymerase II C-terminal domain 5
paths to the root