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ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of bile acid biosynthetic process
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Accession:GO:0070857 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of bile acids.
Synonyms:exact_synonym: regulation of bile acid anabolism;   regulation of bile acid biosynthesis;   regulation of bile acid formation;   regulation of bile acid synthesis


show annotations for term's descendants           Sort by:
regulation of bile acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ces1d carboxylesterase 1D involved_in ISO (PMID:18599737) RGD PMID:18599737 NCBI chr19:30,046,494...30,085,039
Ensembl chr19:13,796,623...13,912,035 		JBrowse link
G Cyp7a1 cytochrome P450 family 7 subfamily A member 1 involved_in ISO
IDA
IEA		 (PMID:19965590)
PMID:1694852
GO_REF:0000107		 RGD
Ensembl		 PMID:19965590 PMID:1694852 GO_REF:0000107, RGD:70534 NCBI chr 5:24,174,505...24,184,202
Ensembl chr 5:19,376,974...19,386,688 		JBrowse link
G Fgfr4 fibroblast growth factor receptor 4 involved_in ISO
ISS
IEA
IBA		 (PMID:17623664), (PMID:20683963)
GO_REF:0000024
GO_REF:0000107
GO_REF:0000033
(PMID:10809780)		 RGD
UniProt
Ensembl
GO_Central		 PMID:10809780 PMID:17623664 PMID:20683963 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr17:9,466,686...9,481,423
Ensembl chr17:9,461,547...9,476,242 		JBrowse link
G Sirt1 sirtuin 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:20375098)		 Ensembl
RGD		 PMID:20375098 GO_REF:0000107 NCBI chr20:25,305,953...25,328,000
Ensembl chr20:25,306,917...25,329,260 		JBrowse link
negative regulation of bile acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf19 fibroblast growth factor 19 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:12815072)
GO_REF:0000107
MGI:1928271 (PMID:23747249)		 RGD
Ensembl		 PMID:12815072 PMID:23747249 GO_REF:0000107 NCBI chr 1:209,485,813...209,490,267
Ensembl chr 1:200,056,644...200,060,287 		JBrowse link
G Malrd1 MAM and LDL receptor class A domain containing 1 acts_upstream_of_or_within ISO
IEA		 MGI:1096383|MGI:2154956 (PMID:23747249)
GO_REF:0000107		 RGD
Ensembl		 PMID:23747249 GO_REF:0000107 NCBI chr17:83,327,372...84,039,558
Ensembl chr17:78,418,819...79,131,016 		JBrowse link
G Mir33 microRNA 33 involved_in ISO (PMID:23536474) RGD PMID:23536474 NCBI chr 7:115,593,952...115,594,020
Ensembl chr 7:113,713,855...113,713,923 		JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO
IEA		 (PMID:16488887)
GO_REF:0000107		 RGD
Ensembl		 PMID:16488887 GO_REF:0000107 NCBI chr13:104,196,615...104,251,007
Ensembl chr13:101,669,184...101,711,183 		JBrowse link
positive regulation of bile acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 involved_in IEA
ISS
ISO		 GO_REF:0000107
GO_REF:0000024
(PMID:18565334), (PMID:19721697)		 Ensembl
UniProt
RGD		 PMID:18565334 PMID:19721697 GO_REF:0000024 GO_REF:0000107 NCBI chr10:84,224,599...84,231,812
Ensembl chr10:83,728,318...83,735,705 		JBrowse link
G Star steroidogenic acute regulatory protein involved_in ISO (PMID:18403318) RGD PMID:18403318 NCBI chr16:72,969,824...72,974,447
Ensembl chr16:66,264,807...66,271,672 		JBrowse link
G Stard4 StAR-related lipid transfer domain containing 4 involved_in ISO
IEA		 (PMID:18403318)
GO_REF:0000107		 RGD
Ensembl		 PMID:18403318 GO_REF:0000107 NCBI chr18:25,088,831...25,104,172
Ensembl chr18:24,817,107...24,830,024 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20567
    cellular process 19557
      metabolic process 12206
        ketone metabolic process 255
          regulation of ketone metabolic process 162
            regulation of bile acid biosynthetic process 11
              negative regulation of bile acid biosynthetic process 4
              positive regulation of bile acid biosynthetic process 3
Path 2
Term Annotations click to browse term
  biological_process 20567
    cellular process 19557
      metabolic process 12206
        small molecule metabolic process 1947
          organic acid metabolic process 1062
            oxoacid metabolic process 1040
              carboxylic acid metabolic process 1025
                monocarboxylic acid metabolic process 737
                  bile acid metabolic process 43
                    bile acid biosynthetic process 26
                      regulation of bile acid biosynthetic process 11
                        negative regulation of bile acid biosynthetic process 4
                        positive regulation of bile acid biosynthetic process 3
paths to the root