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ONTOLOGY REPORT - ANNOTATIONS

Term:basement membrane assembly
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Accession:GO:0070831 term browser browse the term
Definition:The aggregation, arrangement and bonding together of a set of components to form a basement membrane, a part of the extracellular region that consists of a thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue.
Comment:Note that this term has no relationship to 'membrane assembly ; GO:0071709' because the basement membrane is not a lipid bilayer.


show annotations for term's descendants           Sort by:
basement membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LAMB1 laminin subunit beta 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr18:12,634,640...12,700,311
Ensembl chr18:12,630,554...12,700,308 		JBrowse link
G LAMB3 laminin subunit beta 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:8,272,326...8,313,322
Ensembl chr 7:8,272,736...8,310,474 		JBrowse link
G NTN4 netrin 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr15:35,527,491...35,650,170
Ensembl chr15:35,528,133...35,649,566 		JBrowse link
G PLOD3 procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16467571) Ensembl
MGI		 PMID:16467571 GO_REF:0000107 NCBI chr 6:8,664,135...8,671,637
Ensembl chr 6:8,664,358...8,671,620 		JBrowse link
G PXDN peroxidasin acts_upstream_of
involved_in		 ISO
IEA		 (PMID:32543734) UniProt
Ensembl		 PMID:32543734 GO_REF:0000107 NCBI chr17:834,625...891,551
Ensembl chr17:836,434...875,117 		JBrowse link
G RAMP2 receptor activity modifying protein 2 involved_in ISO (MGI:3772552|PMID:18097473) UniProt PMID:18097473 MGI:3772552 NCBI chr 9:20,250,711...20,252,485 JBrowse link
positive regulation of basement membrane assembly involved in embryonic body morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLASP1 cytoplasmic linker associated protein 1 involved_in ISO (PMID:23940118) UniProt PMID:23940118 NCBI chr19:28,563,189...28,830,503
Ensembl chr19:28,595,040...28,827,645 		JBrowse link
G CLASP2 cytoplasmic linker associated protein 2 involved_in ISO (PMID:23940118) UniProt PMID:23940118 NCBI chr23:3,261,778...3,423,698
Ensembl chr23:3,246,522...3,421,716 		JBrowse link
G DAG1 dystroglycan 1 involved_in ISO (PMID:23940118) UniProt PMID:23940118 NCBI chr20:39,707,672...39,779,094
Ensembl chr20:39,708,053...39,778,550 		JBrowse link
G PHLDB1 pleckstrin homology like domain family B member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:15,090,823...15,138,397
Ensembl chr 5:15,090,813...15,134,784 		JBrowse link
G PHLDB2 pleckstrin homology like domain family B member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr33:16,521,087...16,615,774
Ensembl chr33:16,497,202...16,614,132 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17917
    cellular process 16926
      cellular component organization or biogenesis 6943
        cellular component organization 6705
          cellular component assembly 3145
            extracellular matrix assembly 59
              basement membrane assembly 11
                basement membrane assembly involved in embryonic body morphogenesis + 5
Path 2
Term Annotations click to browse term
  biological_process 17917
    cellular process 16926
      cellular component organization or biogenesis 6943
        cellular component organization 6705
          extracellular structure organization 347
            extracellular matrix organization 344
              extracellular matrix assembly 59
                basement membrane assembly 11
                  basement membrane assembly involved in embryonic body morphogenesis + 5
paths to the root