Send us a Message



 Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap)  (beta) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer) Overgo Probe Designer
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models PhenoMiner (Quantitative Phenotypes) Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:protein modification by small protein removal
go back to main search page
Accession:GO:0070646 term browser browse the term
Definition:A protein modification process in which one or more covalently attached groups of a small protein, such as ubiquitin or a ubiquitin-like protein, are removed from a target protein.


show annotations for term's descendants           Sort by:
protein modification by small protein removal term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Desi1 desumoylating isopeptidase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:113,519,974...113,542,834
Ensembl chr 7:113,519,980...113,542,845 		JBrowse link
G Senp6 SUMO specific peptidase 6 involved_in ISO (PMID:20212317) RGD PMID:20212317 NCBI chr 8:80,988,675...81,071,606
Ensembl chr 8:80,989,052...81,067,170 		JBrowse link
histone deubiquitination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atxn7 ataxin 7 involved_in ISO (PMID:18206972) UniProt PMID:18206972 NCBI chr15:11,117,360...11,262,818
Ensembl chr15:11,118,886...11,263,106 		JBrowse link
G Atxn7l3 ataxin 7-like 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:87,242,843...87,250,186
Ensembl chr10:87,243,587...87,250,620 		JBrowse link
G Eny2 ENY2, transcription and export complex 2 subunit involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:75,581,215...75,605,903
Ensembl chr 7:75,581,240...75,605,897 		JBrowse link
G Kat2a lysine acetyltransferase 2A involved_in ISO (PMID:18206972) UniProt PMID:18206972 NCBI chr10:85,632,216...85,640,561
Ensembl chr10:85,632,216...85,640,166 		JBrowse link
G Supt3h SPT3 homolog, SAGA and STAGA complex component involved_in ISO (PMID:18206972) UniProt PMID:18206972 NCBI chr 9:15,878,296...16,206,768
Ensembl chr 9:15,868,287...16,206,706 		JBrowse link
G Taf10 TATA-box binding protein associated factor 10 involved_in ISO (PMID:18206972) UniProt PMID:18206972 NCBI chr 1:160,095,108...160,096,401
Ensembl chr 1:160,095,108...160,096,376 		JBrowse link
G Trrap transformation/transcription domain-associated protein involved_in ISO (PMID:18206972) UniProt PMID:18206972 NCBI chr12:9,738,006...9,827,708
Ensembl chr12:9,738,006...9,827,674 		JBrowse link
G Usp16 ubiquitin specific peptidase 16 involved_in ISO (PMID:17914355) UniProt PMID:17914355 NCBI chr11:26,681,359...26,711,313
Ensembl chr11:26,681,414...26,710,539 		JBrowse link
G Usp22 ubiquitin specific peptidase 22 involved_in ISO (PMID:18206972), (PMID:18206973) UniProt PMID:18206972 PMID:18206973 NCBI chr10:45,831,226...45,855,325
Ensembl chr10:45,828,622...45,855,497 		JBrowse link
G Usp3 ubiquitin specific peptidase 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:67,078,249...67,154,109
Ensembl chr 8:67,079,927...67,154,111 		JBrowse link
G Usp36 ubiquitin specific peptidase 36 involved_in ISO (PMID:29274341) UniProt PMID:29274341 NCBI chr10:103,497,349...103,528,877
Ensembl chr10:103,497,349...103,528,877 		JBrowse link
G Usp51 ubiquitin specific peptidase 51 involved_in ISO (PMID:27083998) UniProt PMID:27083998 NCBI chr  X:18,374,940...18,381,472
Ensembl chr  X:18,376,930...18,379,888 		JBrowse link
histone H2A K63-linked deubiquitination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brcc3 BRCA1/BRCA2-containing complex, subunit 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:1,986,942...1,989,484
Ensembl chr 9:1,986,575...1,991,080 		JBrowse link
G Brcc3dc BRCA1/BRCA2-containing complex, subunit 3, domain containing involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 7:44,014,889...44,017,678
Ensembl chr 7:44,005,646...44,016,670 		JBrowse link
G Mpnd MPN domain containing involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:839,473...846,446
Ensembl chr 9:840,143...846,439 		JBrowse link
G Uimc1 ubiquitin interaction motif containing 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:9,523,793...9,592,810
Ensembl chr17:9,527,794...9,592,799 		JBrowse link
G Usp16 ubiquitin specific peptidase 16 involved_in ISO (PMID:20550933) UniProt PMID:20550933 NCBI chr11:26,681,359...26,711,313
Ensembl chr11:26,681,414...26,710,539 		JBrowse link
histone H2B conserved C-terminal lysine deubiquitination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Usp15 ubiquitin specific peptidase 15 involved_in ISO (PMID:24526689) UniProt PMID:24526689 NCBI chr 7:58,756,714...58,848,778
Ensembl chr 7:58,756,872...58,848,721 		JBrowse link
G Usp49 ubiquitin specific peptidase 49 involved_in ISO (PMID:23824326) UniProt PMID:23824326 NCBI chr 9:13,305,640...13,366,132
Ensembl chr 9:13,308,178...13,366,132 		JBrowse link
monoubiquitinated histone deubiquitination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atxn7 ataxin 7 involved_in ISO (PMID:18206972) RGD PMID:18206972 NCBI chr15:11,117,360...11,262,818
Ensembl chr15:11,118,886...11,263,106 		JBrowse link
G Atxn7l3 ataxin 7-like 3 involved_in ISO (PMID:18206972) RGD PMID:18206972 NCBI chr10:87,242,843...87,250,186
Ensembl chr10:87,243,587...87,250,620 		JBrowse link
G Eny2 ENY2, transcription and export complex 2 subunit involved_in ISO (PMID:18206972) RGD PMID:18206972 NCBI chr 7:75,581,215...75,605,903
Ensembl chr 7:75,581,240...75,605,897 		JBrowse link
G Kat2a lysine acetyltransferase 2A involved_in ISO (PMID:18206972) RGD PMID:18206972 NCBI chr10:85,632,216...85,640,561
Ensembl chr10:85,632,216...85,640,166 		JBrowse link
G Sf3b3 splicing factor 3b, subunit 3 involved_in ISO (PMID:18206972) RGD PMID:18206972 NCBI chr19:38,782,749...38,820,271
Ensembl chr19:38,783,040...38,820,245 		JBrowse link
G Sf3b5 splicing factor 3b, subunit 5 involved_in ISO (PMID:18206972) RGD PMID:18206972 NCBI chr 1:7,357,040...7,357,752
Ensembl chr 1:7,350,731...7,357,839 		JBrowse link
G Sgf29 SAGA complex associated factor 29 involved_in ISO (PMID:18206972) RGD PMID:18206972 NCBI chr 1:181,238,449...181,271,931
Ensembl chr 1:181,238,468...181,274,781 		JBrowse link
G Supt20h SPT20 homolog, SAGA complex component involved_in ISO (PMID:18206972) RGD PMID:18206972 NCBI chr 2:138,897,316...138,930,495
Ensembl chr 2:138,897,416...138,930,495 		JBrowse link
G Supt3h SPT3 homolog, SAGA and STAGA complex component involved_in ISO (PMID:18206972) RGD PMID:18206972 NCBI chr 9:15,878,296...16,206,768
Ensembl chr 9:15,868,287...16,206,706 		JBrowse link
G Supt7l SPT7 like, STAGA complex subunit gamma involved_in ISO (PMID:18206972) RGD PMID:18206972 NCBI chr 6:24,933,941...24,944,656
Ensembl chr 6:24,933,923...24,944,654 		JBrowse link
G Tada1 transcriptional adaptor 1 involved_in ISO (PMID:18206972) RGD PMID:18206972 NCBI chr13:78,632,908...78,646,863
Ensembl chr13:78,632,866...78,647,504 		JBrowse link
G Tada2b transcriptional adaptor 2B involved_in ISO (PMID:18206972) RGD PMID:18206972 NCBI chr14:74,279,286...74,290,758
Ensembl chr14:74,279,217...74,290,755 		JBrowse link
G Tada3 transcriptional adaptor 3 involved_in ISO (PMID:18206972) RGD PMID:18206972 NCBI chr 4:146,510,213...146,521,975
Ensembl chr 4:146,510,246...146,521,590 		JBrowse link
G Taf10 TATA-box binding protein associated factor 10 involved_in ISO (PMID:18206972) RGD PMID:18206972 NCBI chr 1:160,095,108...160,096,401
Ensembl chr 1:160,095,108...160,096,376 		JBrowse link
G Taf12 TATA-box binding protein associated factor 12 involved_in ISO (PMID:18206972) RGD PMID:18206972 NCBI chr 5:144,472,816...144,490,299
Ensembl chr 5:144,472,841...144,488,849 		JBrowse link
G Taf2 TATA-box binding protein associated factor 2 involved_in ISO (PMID:18206972) RGD PMID:18206972 NCBI chr 7:86,422,613...86,479,616
Ensembl chr 7:86,422,613...86,479,616 		JBrowse link
G Taf4 TATA-box binding protein associated factor 4 involved_in ISO (PMID:18206972) RGD PMID:18206972 NCBI chr 3:167,017,992...167,083,413
Ensembl chr 3:167,017,993...167,083,356 		JBrowse link
G Taf5 TATA-box binding protein associated factor 5 involved_in ISO (PMID:18206972) RGD PMID:18206972 NCBI chr 1:245,958,428...245,973,914
Ensembl chr 1:245,958,428...245,973,914 		JBrowse link
G Taf5l1 TATA-box binding protein associated factor 5 like 1 involved_in ISO (PMID:18206972) RGD PMID:18206972 NCBI chr19:51,991,704...52,011,001
Ensembl chr19:51,991,708...52,011,295 		JBrowse link
G Taf6 TATA-box binding protein associated factor 6 involved_in ISO (PMID:18206972) RGD PMID:18206972 NCBI chr12:17,055,864...17,064,244
Ensembl chr12:17,055,873...17,064,247 		JBrowse link
G Taf6l TATA-box binding protein associated factor 6 like involved_in ISO (PMID:18206972) RGD PMID:18206972 NCBI chr 1:205,672,147...205,684,721
Ensembl chr 1:205,672,149...205,684,655 		JBrowse link
G Taf7 TATA-box binding protein associated factor 7 involved_in ISO (PMID:18206972) RGD PMID:18206972 NCBI chr18:29,459,937...29,462,086
Ensembl chr18:29,452,943...29,462,134 		JBrowse link
G Taf9 TATA-box binding protein associated factor 9 involved_in ISO (PMID:18206972) RGD PMID:18206972 NCBI chr 2:31,794,316...31,798,324
Ensembl chr 2:31,794,142...31,798,769 		JBrowse link
G Trrap transformation/transcription domain-associated protein involved_in ISO (PMID:18206972) RGD PMID:18206972 NCBI chr12:9,738,006...9,827,708
Ensembl chr12:9,738,006...9,827,674 		JBrowse link
G Usp22 ubiquitin specific peptidase 22 involved_in ISO (PMID:18206972) RGD PMID:18206972 NCBI chr10:45,831,226...45,855,325
Ensembl chr10:45,828,622...45,855,497 		JBrowse link
monoubiquitinated histone H2A deubiquitination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asxl1 ASXL transcriptional regulator 1 involved_in ISO (PMID:20436459) RGD PMID:20436459 NCBI chr 3:141,814,012...141,881,526
Ensembl chr 3:141,813,433...141,881,538 		JBrowse link
G Atxn7 ataxin 7 involved_in ISO (PMID:18206972) RGD PMID:18206972 NCBI chr15:11,117,360...11,262,818
Ensembl chr15:11,118,886...11,263,106 		JBrowse link
G Atxn7l3 ataxin 7-like 3 involved_in ISO (PMID:18206972) RGD PMID:18206972 NCBI chr10:87,242,843...87,250,186
Ensembl chr10:87,243,587...87,250,620 		JBrowse link
G Bap1 Brca1 associated protein 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:20436459)		 Ensembl
RGD		 PMID:20436459 GO_REF:0000107 NCBI chr16:6,446,709...6,455,535
Ensembl chr16:6,446,709...6,455,535 		JBrowse link
G Eny2 ENY2, transcription and export complex 2 subunit involved_in ISO (PMID:18206972) RGD PMID:18206972 NCBI chr 7:75,581,215...75,605,903
Ensembl chr 7:75,581,240...75,605,897 		JBrowse link
G Kat2a lysine acetyltransferase 2A involved_in ISO (PMID:18206972) RGD PMID:18206972 NCBI chr10:85,632,216...85,640,561
Ensembl chr10:85,632,216...85,640,166 		JBrowse link
G Mysm1 myb-like, SWIRM and MPN domains 1 involved_in ISO (PMID:17707232) UniProt PMID:17707232 NCBI chr 5:109,761,345...109,826,652
Ensembl chr 5:109,776,286...109,819,967 		JBrowse link
G Sf3b3 splicing factor 3b, subunit 3 involved_in ISO (PMID:18206972) RGD PMID:18206972 NCBI chr19:38,782,749...38,820,271
Ensembl chr19:38,783,040...38,820,245 		JBrowse link
G Sf3b5 splicing factor 3b, subunit 5 involved_in ISO (PMID:18206972) RGD PMID:18206972 NCBI chr 1:7,357,040...7,357,752
Ensembl chr 1:7,350,731...7,357,839 		JBrowse link
G Sgf29 SAGA complex associated factor 29 involved_in ISO (PMID:18206972) RGD PMID:18206972 NCBI chr 1:181,238,449...181,271,931
Ensembl chr 1:181,238,468...181,274,781 		JBrowse link
G Supt20h SPT20 homolog, SAGA complex component involved_in ISO (PMID:18206972) RGD PMID:18206972 NCBI chr 2:138,897,316...138,930,495
Ensembl chr 2:138,897,416...138,930,495 		JBrowse link
G Supt3h SPT3 homolog, SAGA and STAGA complex component involved_in ISO (PMID:18206972) RGD PMID:18206972 NCBI chr 9:15,878,296...16,206,768
Ensembl chr 9:15,868,287...16,206,706 		JBrowse link
G Supt7l SPT7 like, STAGA complex subunit gamma involved_in ISO (PMID:18206972) RGD PMID:18206972 NCBI chr 6:24,933,941...24,944,656
Ensembl chr 6:24,933,923...24,944,654 		JBrowse link
G Tada1 transcriptional adaptor 1 involved_in ISO
IEA		 (PMID:18206972)
GO_REF:0000107		 RGD
Ensembl		 PMID:18206972 GO_REF:0000107 NCBI chr13:78,632,908...78,646,863
Ensembl chr13:78,632,866...78,647,504 		JBrowse link
G Tada2b transcriptional adaptor 2B involved_in ISO (PMID:18206972) RGD PMID:18206972 NCBI chr14:74,279,286...74,290,758
Ensembl chr14:74,279,217...74,290,755 		JBrowse link
G Tada3 transcriptional adaptor 3 involved_in ISO (PMID:18206972) RGD PMID:18206972 NCBI chr 4:146,510,213...146,521,975
Ensembl chr 4:146,510,246...146,521,590 		JBrowse link
G Taf10 TATA-box binding protein associated factor 10 involved_in ISO (PMID:18206972) RGD PMID:18206972 NCBI chr 1:160,095,108...160,096,401
Ensembl chr 1:160,095,108...160,096,376 		JBrowse link
G Taf12 TATA-box binding protein associated factor 12 involved_in ISO (PMID:18206972) RGD PMID:18206972 NCBI chr 5:144,472,816...144,490,299
Ensembl chr 5:144,472,841...144,488,849 		JBrowse link
G Taf2 TATA-box binding protein associated factor 2 involved_in ISO (PMID:18206972) RGD PMID:18206972 NCBI chr 7:86,422,613...86,479,616
Ensembl chr 7:86,422,613...86,479,616 		JBrowse link
G Taf4 TATA-box binding protein associated factor 4 involved_in ISO (PMID:18206972) RGD PMID:18206972 NCBI chr 3:167,017,992...167,083,413
Ensembl chr 3:167,017,993...167,083,356 		JBrowse link
G Taf5 TATA-box binding protein associated factor 5 involved_in ISO (PMID:18206972) RGD PMID:18206972 NCBI chr 1:245,958,428...245,973,914
Ensembl chr 1:245,958,428...245,973,914 		JBrowse link
G Taf5l1 TATA-box binding protein associated factor 5 like 1 involved_in ISO (PMID:18206972) RGD PMID:18206972 NCBI chr19:51,991,704...52,011,001
Ensembl chr19:51,991,708...52,011,295 		JBrowse link
G Taf6 TATA-box binding protein associated factor 6 involved_in ISO (PMID:18206972) RGD PMID:18206972 NCBI chr12:17,055,864...17,064,244
Ensembl chr12:17,055,873...17,064,247 		JBrowse link
G Taf6l TATA-box binding protein associated factor 6 like involved_in ISO (PMID:18206972) RGD PMID:18206972 NCBI chr 1:205,672,147...205,684,721
Ensembl chr 1:205,672,149...205,684,655 		JBrowse link
G Taf7 TATA-box binding protein associated factor 7 involved_in ISO (PMID:18206972) RGD PMID:18206972 NCBI chr18:29,459,937...29,462,086
Ensembl chr18:29,452,943...29,462,134 		JBrowse link
G Taf9 TATA-box binding protein associated factor 9 involved_in ISO
IEA		 (PMID:18206972)
GO_REF:0000107		 RGD
Ensembl		 PMID:18206972 GO_REF:0000107 NCBI chr 2:31,794,316...31,798,324
Ensembl chr 2:31,794,142...31,798,769 		JBrowse link
G Trrap transformation/transcription domain-associated protein involved_in ISO (PMID:18206972) RGD PMID:18206972 NCBI chr12:9,738,006...9,827,708
Ensembl chr12:9,738,006...9,827,674 		JBrowse link
G Usp22 ubiquitin specific peptidase 22 involved_in ISO (PMID:18206972) RGD PMID:18206972 NCBI chr10:45,831,226...45,855,325
Ensembl chr10:45,828,622...45,855,497 		JBrowse link
monoubiquitinated protein deubiquitination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atxn3 ataxin 3 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5318000|PMID:21855799)		 UniProt
RGD		 PMID:21855799 GO_REF:0000024 MGI:5318000 NCBI chr 6:121,072,228...121,107,902
Ensembl chr 6:121,074,448...121,107,902 		JBrowse link
G Bap1 Brca1 associated protein 1 involved_in ISO
ISS		 (PMID:24703950)
GO_REF:0000024		 RGD
UniProt		 PMID:24703950 GO_REF:0000024 NCBI chr16:6,446,709...6,455,535
Ensembl chr16:6,446,709...6,455,535 		JBrowse link
G Usp1 ubiquitin specific peptidase 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:20129063)		 UniProt
RGD		 PMID:20129063 GO_REF:0000024 NCBI chr 5:113,587,564...113,598,934
Ensembl chr 5:113,587,564...113,598,932 		JBrowse link
G Usp15 ubiquitin specific peptidase 15 involved_in ISO
ISS
IEA		 (PMID:21947082), (PMID:24399297)
GO_REF:0000024
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:21947082 PMID:24399297 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:58,756,714...58,848,778
Ensembl chr 7:58,756,872...58,848,721 		JBrowse link
G Usp16 ubiquitin specific peptidase 16 involved_in ISO
ISS		 (PMID:32129764)
GO_REF:0000024		 RGD
UniProt		 PMID:32129764 GO_REF:0000024 NCBI chr11:26,681,359...26,711,313
Ensembl chr11:26,681,414...26,710,539 		JBrowse link
G Usp47 ubiquitin specific peptidase 47 involved_in ISO (PMID:21362556) RGD PMID:21362556 NCBI chr 1:166,152,104...166,235,312
Ensembl chr 1:166,152,199...166,235,312 		JBrowse link
G Usp7 ubiquitin specific peptidase 7 acts_upstream_of_or_within ISO (PMID:26280536) RGD PMID:26280536 NCBI chr10:6,880,684...6,925,033
Ensembl chr10:6,828,795...6,925,355 		JBrowse link
G Usp9x ubiquitin specific peptidase 9, X-linked involved_in ISO (PMID:22371489) RGD PMID:22371489 NCBI chr  X:9,588,825...9,726,993
Ensembl chr  X:9,588,825...9,696,711 		JBrowse link
negative regulation of protein deubiquitination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnajb2 DnaJ heat shock protein family (Hsp40) member B2 involved_in ISO (PMID:15936278) RGD PMID:15936278 NCBI chr 9:76,731,060...76,739,278
Ensembl chr 9:76,731,065...76,739,277 		JBrowse link
G Trim21 tripartite motif-containing 21 involved_in ISO (PMID:16472766) RGD PMID:16472766 NCBI chr 1:156,964,896...156,987,504
Ensembl chr 1:156,964,913...156,987,440 		JBrowse link
negative regulation of protein K48-linked deubiquitination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Park7 Parkinsonism associated deglycase involved_in ISO
ISS		 (PMID:21097510)
GO_REF:0000024		 RGD
ParkinsonsUK-UCL		 PMID:21097510 GO_REF:0000024 NCBI chr 5:161,353,718...161,376,993
Ensembl chr 5:161,353,719...161,376,970 		JBrowse link
G Ubxn1 UBX domain protein 1 involved_in ISO
IBA		 (PMID:21135095)
PMID:21873635		 RGD PMID:21135095 PMID:21873635 RGD:13792537 NCBI chr 1:205,765,212...205,769,236
Ensembl chr 1:205,745,120...205,816,520 		JBrowse link
positive regulation of histone deubiquitination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sart3 spliceosome associated factor 3, U4/U6 recycling protein involved_in ISO (PMID:24526689) UniProt PMID:24526689 NCBI chr12:42,859,026...42,887,041
Ensembl chr12:42,859,305...42,887,038 		JBrowse link
positive regulation of Lys63-specific deubiquitinase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vcp valosin-containing protein involved_in ISO (PMID:22970133) RGD PMID:22970133 NCBI chr 5:57,210,167...57,229,571
Ensembl chr 5:57,210,168...57,229,571 		JBrowse link
positive regulation of protein deubiquitination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tank TRAF family member-associated NFKB activator involved_in ISO (PMID:25861989) RGD PMID:25861989 NCBI chr 3:46,114,253...46,190,270
Ensembl chr 3:46,114,274...46,190,264 		JBrowse link
G Tnip1 TNFAIP3 interacting protein 1 involved_in ISO (PMID:16684768) RGD PMID:16684768 NCBI chr10:39,037,048...39,084,328
Ensembl chr10:39,037,058...39,077,625 		JBrowse link
G Wdr48 WD repeat domain 48 involved_in ISO (PMID:31253762) UniProt PMID:31253762 NCBI chr 8:119,622,053...119,655,264
Ensembl chr 8:119,622,048...119,655,264 		JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A involved_in ISS
ISO		 GO_REF:0000024
(PMID:25861989)		 UniProt
RGD		 PMID:25861989 GO_REF:0000024 NCBI chr 5:137,376,562...137,385,351
Ensembl chr 5:137,376,564...137,385,351 		JBrowse link
positive regulation of protein K63-linked deubiquitination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nop53 NOP53 ribosome biogenesis factor involved_in ISO (PMID:27824081) RGD PMID:27824081 NCBI chr 1:76,629,084...76,636,902
Ensembl chr 1:76,629,069...76,636,902 		JBrowse link
G Vcp valosin-containing protein involved_in ISO (PMID:22970133) RGD PMID:22970133 NCBI chr 5:57,210,167...57,229,571
Ensembl chr 5:57,210,168...57,229,571 		JBrowse link
protein deneddylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cops2 COP9 signalosome subunit 2 involved_in IBA
ISO		 PMID:21873635
(PMID:19141280)		 RGD PMID:19141280 PMID:21873635 RGD:13792537 NCBI chr 3:113,084,174...113,110,090
Ensembl chr 3:113,084,176...113,109,947 		JBrowse link
G Cops3 COP9 signalosome subunit 3 involved_in ISO (PMID:19141280) RGD PMID:19141280 NCBI chr10:44,618,115...44,652,807
Ensembl chr10:44,618,115...44,641,597 		JBrowse link
G Cops4 COP9 signalosome subunit 4 involved_in ISO
ISS		 (PMID:19141280), (PMID:21102408)
GO_REF:0000024		 RGD
UniProt		 PMID:19141280 PMID:21102408 GO_REF:0000024 NCBI chr14:9,078,579...9,108,788
Ensembl chr14:9,078,576...9,108,887 		JBrowse link
G Cops5 COP9 signalosome subunit 5 involved_in ISO
IBA		 (PMID:19141280), (PMID:19214193)
PMID:21873635		 RGD PMID:19141280 PMID:19214193 PMID:21873635 RGD:13792537 NCBI chr 5:9,192,233...9,210,498
Ensembl chr 5:9,192,100...9,210,731 		JBrowse link
G Cops6 COP9 signalosome subunit 6 involved_in ISO (PMID:19141280) RGD PMID:19141280 NCBI chr12:17,038,979...17,041,818
Ensembl chr12:17,038,979...17,046,371 		JBrowse link
G Cops7a COP9 signalosome subunit 7A involved_in ISO (PMID:19141280) RGD PMID:19141280 NCBI chr 4:157,766,626...157,792,632
Ensembl chr 4:157,766,588...157,773,948 		JBrowse link
G Cops7b COP9 signalosome subunit 7B involved_in ISO (PMID:19141280) RGD PMID:19141280 NCBI chr 9:87,238,132...87,263,967
Ensembl chr 9:87,238,375...87,263,967 		JBrowse link
G Cops8 COP9 signalosome subunit 8 involved_in ISO
IEA		 (PMID:19141280)
GO_REF:0000002		 RGD
InterPro		 PMID:19141280 GO_REF:0000002 NCBI chr 9:91,207,427...91,217,258
Ensembl chr 9:91,207,395...91,217,258 		JBrowse link
G Gps1 G protein pathway suppressor 1 involved_in ISO
IEA		 (PMID:19141280)
GO_REF:0000107		 RGD
Ensembl		 PMID:19141280 GO_REF:0000107 NCBI chr10:106,050,323...106,055,407
Ensembl chr10:106,050,388...106,055,412 		JBrowse link
G Senp8 SUMO peptidase family member, NEDD8 specific involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:60,135,446...60,148,836
Ensembl chr 8:60,121,714...60,148,928 		JBrowse link
G Tor1a torsin family 1, member A involved_in ISO
ISS		 (PMID:21102408)
GO_REF:0000024		 RGD
UniProt		 PMID:21102408 GO_REF:0000024 NCBI chr 3:14,250,667...14,257,704
Ensembl chr 3:14,250,676...14,257,691 		JBrowse link
protein desumoylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Desi1 desumoylating isopeptidase 1 involved_in ISO (MGI:5508711|PMID:22370726) RGD PMID:22370726 MGI:5508711 NCBI chr 7:113,519,974...113,542,834
Ensembl chr 7:113,519,980...113,542,845 		JBrowse link
G ENSRNOG00000066305 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 4:161,483,289...161,484,020 JBrowse link
G ENSRNOG00000070785 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 4:161,450,400...161,451,131 JBrowse link
G Hint1 histidine triad nucleotide binding protein 1 involved_in ISO
ISS		 (PMID:31088288)
GO_REF:0000024
(MGI:6457166|PMID:31088288)		 RGD
UniProt		 PMID:31088288 GO_REF:0000024 MGI:6457166 NCBI chr10:38,989,516...38,993,259
Ensembl chr 4:92,100,973...92,101,568 		JBrowse link
G LOC690251 similar to SUMO/sentrin specific protease 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:205,625,490...205,628,352
Ensembl chr 1:205,625,668...205,627,920 		JBrowse link
G Senp1 SUMO specific peptidase 1 involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:21965678)
PMID:21873635
MGI:3582213 (MGI:3575864|PMID:15767674), (MGI:3581372|PMID:15923632), (MGI:3818351|PMID:17981124), (MGI:5448615|PMID:22942423)
(MGI:4452185|PMID:20233849)		 RGD PMID:15767674 PMID:15923632 PMID:17981124 PMID:20233849 PMID:21965678 More... MGI:3575864 MGI:3581372 MGI:3818351 MGI:4452185 MGI:5448615, RGD:13792537 NCBI chr 7:129,163,173...129,226,766
Ensembl chr 7:129,165,774...129,221,598 		JBrowse link
G Senp18 Sumo1/sentrin/SMT3 specific peptidase 18 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:161,066,262...161,067,689
Ensembl chr 4:161,065,389...161,067,875 		JBrowse link
G Senp2 SUMO specific peptidase 2 involved_in
acts_upstream_of_or_within		 ISS
IBA
ISO		 GO_REF:0000024
PMID:21873635
MGI:3818535 (MGI:3575864|PMID:15767674), (MGI:4820664|PMID:20417598)
(MGI:2670563|PMID:12419228), (MGI:4461072|PMID:20194620)
(MGI:5433829|PMID:21183956)
(PMID:20194620), (PMID:21965678), (PMID:22028379)		 UniProt
RGD		 PMID:12419228 PMID:15767674 PMID:20194620 PMID:20417598 PMID:21183956 More... GO_REF:0000024 MGI:2670563 MGI:3575864 MGI:4461072 MGI:4820664 MGI:5433829, RGD:13792537 NCBI chr11:78,981,429...79,018,274
Ensembl chr11:78,981,432...79,018,238 		JBrowse link
G Senp2-ps1 SUMO specific peptidase 2, pseudogene 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:161,184,094...161,185,484
Ensembl chr 4:161,184,094...161,184,825 		JBrowse link
G Senp3 SUMO specific peptidase 3 involved_in ISO
IBA		 (PMID:27814492), (PMID:32832608)
PMID:21873635		 RGD PMID:27814492 PMID:32832608 PMID:21873635 RGD:13792537 NCBI chr10:54,390,698...54,399,590
Ensembl chr10:54,390,694...54,399,593 		JBrowse link
G Senp5 SUMO specific peptidase 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:68,784,699...68,819,569
Ensembl chr11:68,784,957...68,819,562 		JBrowse link
G Senp6 SUMO specific peptidase 6 involved_in ISO
IBA		 (PMID:20212317)
PMID:21873635		 RGD PMID:20212317 PMID:21873635 RGD:13792537 NCBI chr 8:80,988,675...81,071,606
Ensembl chr 8:80,989,052...81,067,170 		JBrowse link
G Senp7 SUMO specific peptidase 7 involved_in ISO
IBA
ISS		 (MGI:5918130|PMID:28095500)
PMID:21873635
GO_REF:0000024		 RGD
UniProt		 PMID:28095500 PMID:21873635 GO_REF:0000024 MGI:5918130, RGD:13792537 NCBI chr11:44,423,735...44,584,129
Ensembl chr11:44,423,735...44,564,711 		JBrowse link
G Uspl1 ubiquitin specific peptidase like 1 involved_in IBA
ISO		 PMID:21873635
(PMID:22878415)		 RGD PMID:22878415 PMID:21873635 RGD:13792537 NCBI chr12:5,823,460...5,850,470
Ensembl chr12:5,823,359...5,850,366 		JBrowse link
protein deubiquitination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07006871.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 1:241,028,717...241,029,259 JBrowse link
G Atxn3 ataxin 3 involved_in ISO
IEA
IBA		 (PMID:17000876)
GO_REF:0000002
PMID:21873635		 RGD
InterPro		 PMID:17000876 PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr 6:121,072,228...121,107,902
Ensembl chr 6:121,074,448...121,107,902 		JBrowse link
G Bap1 Brca1 associated protein 1 involved_in ISO
IBA
ISS		 (PMID:18757409), (PMID:19815555)
PMID:21873635
GO_REF:0000024		 RGD
UniProt		 PMID:18757409 PMID:19815555 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr16:6,446,709...6,455,535
Ensembl chr16:6,446,709...6,455,535 		JBrowse link
G Cops5 COP9 signalosome subunit 5 involved_in ISO (PMID:19246649) RGD PMID:19246649 NCBI chr 5:9,192,233...9,210,498
Ensembl chr 5:9,192,100...9,210,731 		JBrowse link
G Cyld CYLD lysine 63 deubiquitinase involved_in
acts_upstream_of_or_within		 ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000002
(MGI:6162308|PMID:29291351)
(MGI:5306844|PMID:22037414)
(PMID:29291351)		 UniProt
InterPro
RGD		 PMID:22037414 PMID:29291351 GO_REF:0000002 GO_REF:0000024 MGI:5306844 MGI:6162308 NCBI chr19:18,310,632...18,373,696
Ensembl chr19:18,314,019...18,373,658 		JBrowse link
G Cyld-ps1 CYLD lysine 63 deubiquitinase, pseudogene 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:15,202,074...15,205,290
Ensembl chr 5:15,202,251...15,205,291 		JBrowse link
G Desi2 desumoylating isopeptidase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:89,961,767...90,011,255
Ensembl chr13:89,961,934...90,016,416 		JBrowse link
G Eif3f eukaryotic translation initiation factor 3, subunit F involved_in ISO (PMID:21124883)
(MGI:5553240|PMID:21124883)		 RGD PMID:21124883 MGI:5553240 NCBI chr 1:162,934,220...162,943,204
Ensembl chr 1:162,934,212...162,943,204 		JBrowse link
G ENSRNOG00000064803 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 Ensembl chr 1:159,158,704...159,182,860 JBrowse link
G ENSRNOG00000067432 ubiquitin carboxyl-terminal hydrolase 17-like protein D involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 Ensembl chr 1:159,173,186...159,177,010 JBrowse link
G Josd1 Josephin domain containing 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:111,230,318...111,244,241
Ensembl chr 7:111,230,318...111,244,652 		JBrowse link
G Josd2 Josephin domain containing 2 involved_in ISO
IBA		 (PMID:21118805)
PMID:21873635		 RGD PMID:21118805 PMID:21873635 RGD:13792537 NCBI chr 1:94,960,867...94,964,751
Ensembl chr 1:94,961,107...94,964,749 		JBrowse link
G LOC100910107 ubiquitin carboxyl-terminal hydrolase DUB-1-like involved_in ISO
IBA		 (PMID:20228808)
PMID:21873635		 RGD PMID:20228808 PMID:21873635 RGD:13792537 NCBI chr 1:159,151,417...159,155,192
Ensembl chr 1:159,151,432...159,155,192 		JBrowse link
G LOC120097921 ubiquitin carboxyl-terminal hydrolase 17-like protein D involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 1:158,993,774...158,995,929
Ensembl chr 1:158,993,924...158,995,771 		JBrowse link
G Lrrc69 leucine rich repeat containing 69 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 5:28,023,591...28,181,963
Ensembl chr 5:28,023,593...28,214,384 		JBrowse link
G Otub1 OTU deubiquitinase, ubiquitin aldehyde binding 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:204,387,215...204,395,495
Ensembl chr 1:204,387,215...204,395,483 		JBrowse link
G Otub2 OTU deubiquitinase, ubiquitin aldehyde binding 2 involved_in ISO (PMID:15258613) RGD PMID:15258613 NCBI chr 6:122,545,029...122,563,651
Ensembl chr 6:122,545,061...122,563,644 		JBrowse link
G Otud3 OTU deubiquitinase 3 involved_in ISO (PMID:32011234) RGD PMID:32011234 NCBI chr 5:151,135,826...151,162,207
Ensembl chr 5:151,140,059...151,163,560 		JBrowse link
G Otud4 OTU deubiquitinase 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:28,236,713...28,279,815
Ensembl chr19:28,236,713...28,279,815 		JBrowse link
G Otud5 OTU deubiquitinase 5 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
(PMID:33110214)
(PMID:22245969)		 RGD PMID:22245969 PMID:33110214 PMID:21873635 RGD:13792537 NCBI chr  X:14,626,173...14,659,331
Ensembl chr  X:14,626,164...14,659,573 		JBrowse link
G Otud6b OTU deubiquitinase 6B involved_in IBA
ISO		 PMID:21873635
(PMID:21267069), (PMID:27864334)		 RGD PMID:21267069 PMID:27864334 PMID:21873635 RGD:13792537 NCBI chr 5:28,181,992...28,214,486
Ensembl chr 5:28,023,594...28,214,334 		JBrowse link
G Otud7b OTU deubiquitinase 7B acts_upstream_of_or_within ISO (MGI:2665237|PMID:12682062) RGD PMID:12682062 MGI:2665237 NCBI chr 2:183,661,955...183,722,584
Ensembl chr 2:183,662,163...183,718,674 		JBrowse link
G Otulinl OTU deubiquitinase with linear linkage specificity like NOT|involved_in ISO
ISS		 (PMID:31056421)
GO_REF:0000024		 RGD
UniProt		 PMID:31056421 GO_REF:0000024 NCBI chr 2:78,405,994...78,433,860
Ensembl chr 2:78,408,593...78,433,838 		JBrowse link
G Psmd14 proteasome 26S subunit, non-ATPase 14 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:46,254,338...46,347,076
Ensembl chr 3:46,254,330...46,347,076 		JBrowse link
G RGD1561481 similar to ubiquitin specific protease 12 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr  X:149,555,345...149,559,367
Ensembl chr  X:149,558,144...149,559,392 		JBrowse link
G Stambp Stam binding protein acts_upstream_of_or_within ISO MGI:2180168 (MGI:5007601|PMID:21531206)
(PMID:18388320)		 RGD PMID:18388320 PMID:21531206 MGI:5007601 NCBI chr 4:116,055,563...116,083,563
Ensembl chr 4:116,056,057...116,080,543 		JBrowse link
G Tnfaip3 TNF alpha induced protein 3 involved_in ISO (MGI:3777503|PMID:18342009) RGD PMID:18342009 MGI:3777503 NCBI chr 1:13,709,211...13,724,291
Ensembl chr 1:13,709,206...13,725,282 		JBrowse link
G Uchl1 ubiquitin C-terminal hydrolase L1 involved_in ISO
IBA		 (PMID:9521656)
PMID:21873635		 RGD PMID:9521656 PMID:21873635 RGD:13792537 NCBI chr14:41,485,033...41,495,590
Ensembl chr14:41,485,031...41,495,590 		JBrowse link
G Uchl3 ubiquitin C-terminal hydrolase L3 involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:19047059), (PMID:9521656)
PMID:21873635
(MGI:5703670|PMID:26609154)		 RGD PMID:9521656 PMID:19047059 PMID:26609154 PMID:21873635 MGI:5703670, RGD:13792537 NCBI chr15:78,485,304...78,527,355
Ensembl chr15:78,485,315...78,527,355 		JBrowse link
G Uchl5 ubiquitin C-terminal hydrolase L5 involved_in ISO
IBA		 (PMID:18922472), (PMID:28992318)
PMID:21873635		 RGD PMID:18922472 PMID:28992318 PMID:21873635 RGD:13792537 NCBI chr13:55,520,722...55,556,503
Ensembl chr13:55,520,729...55,556,502 		JBrowse link
G Uck2 uridine-cytidine kinase 2 TAS RGD PMID:10581173 RGD:634248 NCBI chr13:79,380,807...79,438,352
Ensembl chr13:79,383,846...79,438,352 		JBrowse link
G Usp1 ubiquitin specific peptidase 1 involved_in ISO
IBA
ISS		 (PMID:18082604)
PMID:21873635
GO_REF:0000024		 RGD
UniProt		 PMID:18082604 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 5:113,587,564...113,598,934
Ensembl chr 5:113,587,564...113,598,932 		JBrowse link
G Usp10 ubiquitin specific peptidase 10 involved_in ISS
IBA
IEA
ISO		 GO_REF:0000024
PMID:21873635
GO_REF:0000104
(PMID:19398555), (PMID:20096447), (PMID:24845384), (PMID:25861989)		 UniProt
RGD		 PMID:19398555 PMID:20096447 PMID:24845384 PMID:25861989 PMID:21873635 GO_REF:0000024 GO_REF:0000104, RGD:13792537 NCBI chr19:47,972,858...48,014,900
Ensembl chr19:47,972,611...48,014,897 		JBrowse link
G Usp11 ubiquitin specific peptidase 11 involved_in ISO
IEA		 (PMID:15314155)
GO_REF:0000104		 RGD
UniProt		 PMID:15314155 GO_REF:0000104 NCBI chr  X:1,473,349...1,489,520
Ensembl chr  X:1,473,350...1,489,520 		JBrowse link
G Usp12 ubiquitin specific peptidase 12 involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:19075014), (PMID:24145035)
PMID:21873635
(MGI:5760090|PMID:26811477)		 RGD PMID:19075014 PMID:24145035 PMID:26811477 PMID:21873635 MGI:5760090, RGD:13792537 NCBI chr12:8,309,845...8,363,686
Ensembl chr12:8,309,750...8,363,656 		JBrowse link
G Usp13 ubiquitin specific peptidase 13 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:115,576,912...115,689,153
Ensembl chr 2:115,577,091...115,686,222 		JBrowse link
G Usp14 ubiquitin specific peptidase 14 involved_in ISO
IBA		 (PMID:23958854)
PMID:21873635		 RGD PMID:23958854 PMID:21873635 RGD:13792537 NCBI chr18:1,018,111...1,057,727
Ensembl chr18:1,019,400...1,057,519 		JBrowse link
G Usp15 ubiquitin specific peptidase 15 involved_in ISO
IEA
IDA		 (PMID:16005295), (PMID:22344298), (PMID:27368102)
GO_REF:0000117
(MGI:6415433|PMID:32101751)
PMID:10880343		 RGD
UniProt		 PMID:16005295 PMID:22344298 PMID:27368102 PMID:32101751 PMID:10880343 GO_REF:0000117 MGI:6415433, RGD:634484 NCBI chr 7:58,756,714...58,848,778
Ensembl chr 7:58,756,872...58,848,721 		JBrowse link
G Usp18 ubiquitin specific peptidase 18 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:154,471,634...154,499,154
Ensembl chr 4:154,471,592...154,499,144 		JBrowse link
G Usp19 ubiquitin specific peptidase 19 involved_in IEA
IMP
ISO		 GO_REF:0000002
GO_REF:0000107
PMID:15562254
(PMID:24356957)		 InterPro
Ensembl
RGD		 PMID:24356957 PMID:15562254 GO_REF:0000002 GO_REF:0000107, RGD:8554323 NCBI chr 8:109,190,727...109,201,761
Ensembl chr 8:109,190,724...109,201,741 		JBrowse link
G Usp2 ubiquitin specific peptidase 2 involved_in IDA
IEA
ISO
ISS
IMP		 PMID:10938131
GO_REF:0000104
(MGI:5607210|PMID:23213472)
(PMID:17290220), (PMID:19838211), (PMID:19917254)
GO_REF:0000024		 UniProt
RGD		 PMID:17290220 PMID:19838211 PMID:19917254 PMID:23213472 PMID:10938131 More... GO_REF:0000024 GO_REF:0000104 MGI:5607210, RGD:634247, RGD:10047248 NCBI chr 8:44,411,457...44,439,668
Ensembl chr 8:44,411,607...44,438,331 		JBrowse link
G Usp20 ubiquitin specific peptidase 20 involved_in ISO (PMID:19424180) RGD PMID:19424180 NCBI chr 3:14,272,737...14,306,409
Ensembl chr 3:14,272,908...14,306,409 		JBrowse link
G Usp21 ubiquitin specific peptidase 21 involved_in IEA
ISO		 GO_REF:0000104
(PMID:32011234)		 UniProt
RGD		 PMID:32011234 GO_REF:0000104 NCBI chr13:83,702,582...83,709,215
Ensembl chr13:83,702,631...83,708,717 		JBrowse link
G Usp22 ubiquitin specific peptidase 22 involved_in
acts_upstream_of_or_within		 ISO (PMID:16378762)
(MGI:3616930|PMID:16378762)		 RGD PMID:16378762 MGI:3616930 NCBI chr10:45,831,226...45,855,325
Ensembl chr10:45,828,622...45,855,497 		JBrowse link
G Usp24 ubiquitin specific peptidase 24 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:121,080,687...121,210,321
Ensembl chr 5:121,080,470...121,210,311 		JBrowse link
G Usp25 ubiquitin specific peptidase 25 involved_in ISO
IBA		 (PMID:22590560)
PMID:21873635		 RGD PMID:22590560 PMID:21873635 RGD:13792537 NCBI chr11:15,603,654...15,711,356
Ensembl chr11:15,603,881...15,711,348 		JBrowse link
G Usp26 ubiquitin specific peptidase 26 involved_in ISO
IBA		 (PMID:20501646)
PMID:21873635		 RGD PMID:20501646 PMID:21873635 RGD:13792537 NCBI chr  X:131,317,200...131,363,964
Ensembl chr  X:131,319,194...131,363,970 		JBrowse link
G Usp27x ubiquitin specific peptidase 27, X-linked involved_in ISO (MGI:5796064|PMID:27013495) RGD PMID:27013495 MGI:5796064 NCBI chr  X:15,123,642...15,126,855
Ensembl chr  X:15,124,596...15,125,912 		JBrowse link
G Usp28 ubiquitin specific peptidase 28 involved_in IEA
IBA
ISO
ISS		 GO_REF:0000002
PMID:21873635
(PMID:16901786), (PMID:17558397), (PMID:18662541)
GO_REF:0000104
GO_REF:0000024		 InterPro
RGD
UniProt		 PMID:16901786 PMID:17558397 PMID:18662541 PMID:21873635 GO_REF:0000002 GO_REF:0000024 GO_REF:0000104, RGD:13792537 NCBI chr 8:49,325,766...49,386,229
Ensembl chr 8:49,325,867...49,386,229 		JBrowse link
G Usp29 ubiquitin specific peptidase 29 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:66,874,216...67,097,731
Ensembl chr 1:66,874,017...67,097,686 		JBrowse link
G Usp30 ubiquitin specific peptidase 30 involved_in IEA
IBA
ISO		 GO_REF:0000104
PMID:21873635
(MGI:5574552|PMID:24513856)
(PMID:14715245), (PMID:24896179)		 UniProt
RGD		 PMID:14715245 PMID:24513856 PMID:24896179 PMID:21873635 GO_REF:0000104 MGI:5574552, RGD:13792537 NCBI chr12:42,501,345...42,555,311
Ensembl chr12:42,501,348...42,555,616 		JBrowse link
G Usp31 ubiquitin specific peptidase 31 involved_in ISO (PMID:16214042) RGD PMID:16214042 NCBI chr 1:176,211,334...176,278,183
Ensembl chr 1:176,215,889...176,278,355 		JBrowse link
G Usp32 ubiquitin specific peptidase 32 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:69,855,885...70,029,075
Ensembl chr10:69,855,885...70,029,137 		JBrowse link
G Usp33 ubiquitin specific peptidase 33 involved_in ISO (PMID:11739384), (PMID:19363159), (PMID:19424180), (PMID:23486064), (PMID:24056301) RGD PMID:11739384 PMID:19363159 PMID:19424180 PMID:23486064 PMID:24056301 NCBI chr 2:241,283,209...241,328,479
Ensembl chr 2:241,292,985...241,328,479 		JBrowse link
G Usp34 ubiquitin specific peptidase 34 involved_in ISO
IBA		 (PMID:14715245)
PMID:21873635		 RGD PMID:14715245 PMID:21873635 RGD:13792537 NCBI chr14:97,285,799...97,476,376
Ensembl chr14:97,286,018...97,476,376 		JBrowse link
G Usp35 ubiquitin specific peptidase 35 involved_in ISO
IBA		 (PMID:14715245)
PMID:21873635		 RGD PMID:14715245 PMID:21873635 RGD:13792537 NCBI chr 1:151,626,195...151,649,926
Ensembl chr 1:151,626,196...151,650,015 		JBrowse link
G Usp36 ubiquitin specific peptidase 36 involved_in ISO
IBA		 (PMID:14715245), (PMID:19208757), (PMID:25775507), (PMID:27445338)
PMID:21873635
(MGI:6117526|PMID:29273634)		 RGD PMID:14715245 PMID:19208757 PMID:25775507 PMID:27445338 PMID:29273634 More... MGI:6117526, RGD:13792537 NCBI chr10:103,497,349...103,528,877
Ensembl chr10:103,497,349...103,528,877 		JBrowse link
G Usp37 ubiquitin specific peptidase 37 involved_in ISO
IBA		 (PMID:14715245), (PMID:27296872)
PMID:21873635		 RGD PMID:14715245 PMID:27296872 PMID:21873635 RGD:13792537 NCBI chr 9:76,018,863...76,118,732
Ensembl chr 9:76,018,991...76,084,044 		JBrowse link
G Usp38 ubiquitin specific peptidase 38 involved_in ISO
IBA		 (PMID:14715245)
PMID:21873635		 RGD PMID:14715245 PMID:21873635 RGD:13792537 NCBI chr19:27,006,046...27,037,449
Ensembl chr19:27,006,046...27,037,437 		JBrowse link
G Usp39 ubiquitin specific peptidase 39 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:104,373,908...104,406,413
Ensembl chr 4:104,373,955...104,406,359 		JBrowse link
G Usp4 ubiquitin specific peptidase 4 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:16316627), (PMID:16339847), (PMID:16472766), (PMID:20595234)
GO_REF:0000104		 UniProt
RGD		 PMID:16316627 PMID:16339847 PMID:16472766 PMID:20595234 GO_REF:0000024 GO_REF:0000104 NCBI chr 8:109,035,402...109,080,427
Ensembl chr 8:109,036,099...109,080,427 		JBrowse link
G Usp40 ubiquitin specific peptidase 40 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:88,607,920...88,678,940
Ensembl chr 9:88,607,930...88,678,914 		JBrowse link
G Usp42 ubiquitin specific peptidase 42 involved_in ISO
IBA
IEA
ISS		 (PMID:14715245)
PMID:21873635
GO_REF:0000002
(MGI:3692690|PMID:16904385)
GO_REF:0000024		 RGD
InterPro
UniProt		 PMID:14715245 PMID:16904385 PMID:21873635 GO_REF:0000002 GO_REF:0000024 MGI:3692690, RGD:13792537 NCBI chr12:10,800,864...10,840,785
Ensembl chr12:10,802,581...10,840,785 		JBrowse link
G Usp43 ubiquitin specific peptidase 43 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:52,549,200...52,611,084
Ensembl chr10:52,548,963...52,611,533 		JBrowse link
G Usp44 ubiquitin specific peptidase 44 involved_in ISO (PMID:14715245), (PMID:17443180), (PMID:20402667) RGD PMID:14715245 PMID:17443180 PMID:20402667 NCBI chr 7:28,364,169...28,412,039
Ensembl chr 7:28,364,033...28,410,053 		JBrowse link
G Usp45 ubiquitin specific peptidase 45 involved_in
acts_upstream_of_or_within		 ISO (PMID:14715245)
(PMID:25538220)		 RGD PMID:14715245 PMID:25538220 NCBI chr 5:35,318,621...35,392,090
Ensembl chr 5:35,318,635...35,389,420 		JBrowse link
G Usp46 ubiquitin specific peptidase 46 involved_in
acts_upstream_of_or_within		 IEA
IBA
ISO		 GO_REF:0000002
PMID:21873635
(MGI:5760090|PMID:26811477)
(PMID:14715245), (PMID:19075014)		 InterPro
RGD		 PMID:14715245 PMID:19075014 PMID:26811477 PMID:21873635 GO_REF:0000002 MGI:5760090, RGD:13792537 NCBI chr14:34,150,055...34,219,227
Ensembl chr14:34,150,004...34,219,227 		JBrowse link
G Usp47 ubiquitin specific peptidase 47 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:166,152,104...166,235,312
Ensembl chr 1:166,152,199...166,235,312 		JBrowse link
G Usp48 ubiquitin specific peptidase 48 involved_in IEA
IBA		 GO_REF:0000002
PMID:21873635		 InterPro PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr 5:149,800,189...149,867,838
Ensembl chr 5:149,800,179...149,867,719 		JBrowse link
G Usp49 ubiquitin specific peptidase 49 involved_in ISO (PMID:14715245) RGD PMID:14715245 NCBI chr 9:13,305,640...13,366,132
Ensembl chr 9:13,308,178...13,366,132 		JBrowse link
G Usp5 ubiquitin specific peptidase 5 involved_in ISO
IBA		 (PMID:24424410)
PMID:21873635		 RGD PMID:24424410 PMID:21873635 RGD:13792537 NCBI chr 4:157,619,643...157,634,711
Ensembl chr 4:157,619,643...157,634,711 		JBrowse link
G Usp50 ubiquitin specific peptidase 50 acts_upstream_of_or_within ISO (PMID:28094437) RGD PMID:28094437 NCBI chr 3:114,012,104...114,035,468
Ensembl chr 3:114,011,702...114,035,476 		JBrowse link
G Usp51 ubiquitin specific peptidase 51 involved_in ISO (PMID:14715245) RGD PMID:14715245 NCBI chr  X:18,374,940...18,381,472
Ensembl chr  X:18,376,930...18,379,888 		JBrowse link
G Usp53 ubiquitin specific peptidase 53 NOT|acts_upstream_of_or_within ISO (MGI:5703670|PMID:26609154) RGD PMID:26609154 MGI:5703670 NCBI chr 2:211,059,512...211,120,942
Ensembl chr 2:211,059,520...211,120,943 		JBrowse link
G Usp54 ubiquitin specific peptidase 54 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr15:3,659,345...3,757,703
Ensembl chr15:3,659,240...3,757,711 		JBrowse link
G Usp7 ubiquitin specific peptidase 7 involved_in IDA
IBA
IEA
ISO
ISS		 PMID:21873635
GO_REF:0000117
(MGI:5442500|PMID:21268065)
GO_REF:0000024
(PMID:11923872), (PMID:16964248), (PMID:18410486), (PMID:21258371), (PMID:21745816), (PMID:25172512), (PMID:26678539), (PMID:27123980)		 UniProt
RGD		 PMID:11923872 PMID:16964248 PMID:18410486 PMID:21258371 PMID:21268065 More... GO_REF:0000024 GO_REF:0000117 MGI:5442500, RGD:2316130, RGD:13792537 NCBI chr10:6,880,684...6,925,033
Ensembl chr10:6,828,795...6,925,355 		JBrowse link
G Usp8 ubiquitin specific peptidase 8 acts_upstream_of_or_within
involved_in		 ISO (MGI:5467546|PMID:15342353)
(PMID:18388320)
(PMID:27302062)
(MGI:3054509|PMID:15314180), (MGI:3620312|PMID:16120644), (MGI:4821940|PMID:16771824)		 RGD PMID:15314180 PMID:15342353 PMID:16120644 PMID:16771824 PMID:18388320 More... MGI:3054509 MGI:3620312 MGI:4821940 MGI:5467546 NCBI chr 3:113,962,136...114,009,683
Ensembl chr 3:113,962,164...114,009,666 		JBrowse link
G Usp9x ubiquitin specific peptidase 9, X-linked involved_in ISO
IBA		 (PMID:19135894)
PMID:21873635
(MGI:6162398|PMID:18410486)		 RGD PMID:18410486 PMID:19135894 PMID:21873635 MGI:6162398, RGD:13792537 NCBI chr  X:9,588,825...9,726,993
Ensembl chr  X:9,588,825...9,696,711 		JBrowse link
G Usp9y ubiquitin specific peptidase 9, Y-linked involved_in IEA
IBA		 GO_REF:0000002
PMID:21873635		 InterPro PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr  Y:1,156,135...1,300,965
Ensembl chr  Y:1,156,135...1,300,943 		JBrowse link
G Vcpip1 valosin containing protein interacting protein 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:32649882)		 UniProt
RGD		 PMID:32649882 GO_REF:0000024 NCBI chr 5:9,534,247...9,560,889
Ensembl chr 5:9,534,129...9,562,040 		JBrowse link
G Wdr48 WD repeat domain 48 involved_in ISO (PMID:18082604), (PMID:19075014), (PMID:24145035) UniProt PMID:18082604 PMID:19075014 PMID:24145035 NCBI chr 8:119,622,053...119,655,264
Ensembl chr 8:119,622,048...119,655,264 		JBrowse link
G Yod1 YOD1 deubiquitinase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:42,175,313...42,177,030
Ensembl chr13:42,174,820...42,177,205 		JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A involved_in ISO (PMID:24048733) RGD PMID:24048733 NCBI chr 5:137,376,562...137,385,351
Ensembl chr 5:137,376,564...137,385,351 		JBrowse link
G Zranb1 zinc finger RANBP2-type containing 1 involved_in ISO (PMID:33637724) RGD PMID:33637724 NCBI chr 1:187,725,354...187,780,129
Ensembl chr 1:187,724,320...187,779,655 		JBrowse link
protein deubiquitination involved in ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Otud7a OTU deubiquitinase 7A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:117,064,428...117,388,217
Ensembl chr 1:117,064,496...117,386,480 		JBrowse link
G Otud7b OTU deubiquitinase 7B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:183,661,955...183,722,584
Ensembl chr 2:183,662,163...183,718,674 		JBrowse link
G Tnfaip3 TNF alpha induced protein 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:13,709,211...13,724,291
Ensembl chr 1:13,709,206...13,725,282 		JBrowse link
G Usp28 ubiquitin specific peptidase 28 involved_in ISO (PMID:24623306) RGD PMID:24623306 NCBI chr 8:49,325,766...49,386,229
Ensembl chr 8:49,325,867...49,386,229 		JBrowse link
G Usp9x ubiquitin specific peptidase 9, X-linked involved_in ISO (PMID:29626158)
(MGI:6157201|PMID:29626158)		 RGD PMID:29626158 MGI:6157201 NCBI chr  X:9,588,825...9,726,993
Ensembl chr  X:9,588,825...9,696,711 		JBrowse link
G Zranb1 zinc finger RANBP2-type containing 1 involved_in ISO
IBA		 (PMID:18281465)
PMID:21873635		 RGD PMID:18281465 PMID:21873635 RGD:13792537 NCBI chr 1:187,725,354...187,780,129
Ensembl chr 1:187,724,320...187,779,655 		JBrowse link
protein K11-linked deubiquitination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Otub2 OTU deubiquitinase, ubiquitin aldehyde binding 2 involved_in ISO
IBA		 (PMID:23827681)
PMID:21873635		 RGD PMID:23827681 PMID:21873635 RGD:13792537 NCBI chr 6:122,545,029...122,563,651
Ensembl chr 6:122,545,061...122,563,644 		JBrowse link
G Otud3 OTU deubiquitinase 3 involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:23827681)
PMID:21873635
(PMID:26280536)		 RGD PMID:23827681 PMID:26280536 PMID:21873635 RGD:13792537 NCBI chr 5:151,135,826...151,162,207
Ensembl chr 5:151,140,059...151,163,560 		JBrowse link
G Otud6a OTU deubiquitinase 6A involved_in IBA
ISO		 PMID:21873635
(PMID:23827681)		 RGD PMID:23827681 PMID:21873635 RGD:13792537 NCBI chr  X:65,514,162...65,515,266
Ensembl chr  X:65,514,191...65,515,063 		JBrowse link
G Otud7a OTU deubiquitinase 7A involved_in IBA
ISO		 PMID:21873635
(PMID:23827681)		 RGD PMID:23827681 PMID:21873635 RGD:13792537 NCBI chr 1:117,064,428...117,388,217
Ensembl chr 1:117,064,496...117,386,480 		JBrowse link
G Otud7b OTU deubiquitinase 7B involved_in ISO
IBA		 (PMID:20622874), (PMID:23827681)
PMID:21873635		 RGD PMID:20622874 PMID:23827681 PMID:21873635 RGD:13792537 NCBI chr 2:183,661,955...183,722,584
Ensembl chr 2:183,662,163...183,718,674 		JBrowse link
G Tnfaip3 TNF alpha induced protein 3 involved_in ISO (PMID:23827681) RGD PMID:23827681 NCBI chr 1:13,709,211...13,724,291
Ensembl chr 1:13,709,206...13,725,282 		JBrowse link
G Usp30 ubiquitin specific peptidase 30 involved_in ISS
ISO		 GO_REF:0000024
(PMID:25621951)		 UniProt
RGD		 PMID:25621951 GO_REF:0000024 NCBI chr12:42,501,345...42,555,311
Ensembl chr12:42,501,348...42,555,616 		JBrowse link
G Usp37 ubiquitin specific peptidase 37 involved_in ISO (PMID:21596315) RGD PMID:21596315 NCBI chr 9:76,018,863...76,118,732
Ensembl chr 9:76,018,991...76,084,044 		JBrowse link
G Vcpip1 valosin containing protein interacting protein 1 involved_in IBA
ISS
ISO		 PMID:21873635
GO_REF:0000024
(PMID:23827681)		 UniProt
RGD		 PMID:23827681 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 5:9,534,247...9,560,889
Ensembl chr 5:9,534,129...9,562,040 		JBrowse link
G Yod1 YOD1 deubiquitinase involved_in ISS
ISO		 GO_REF:0000024
(PMID:23827681), (PMID:24068323)		 UniProt
RGD		 PMID:23827681 PMID:24068323 GO_REF:0000024 NCBI chr13:42,175,313...42,177,030
Ensembl chr13:42,174,820...42,177,205 		JBrowse link
protein K27-linked deubiquitination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Otud3 OTU deubiquitinase 3 acts_upstream_of_or_within
involved_in		 ISO
IBA		 (PMID:26280536)
PMID:21873635		 RGD PMID:26280536 PMID:21873635 RGD:13792537 NCBI chr 5:151,135,826...151,162,207
Ensembl chr 5:151,140,059...151,163,560 		JBrowse link
G Otud6a OTU deubiquitinase 6A involved_in ISO
IBA		 (PMID:23827681)
PMID:21873635		 RGD PMID:23827681 PMID:21873635 RGD:13792537 NCBI chr  X:65,514,162...65,515,266
Ensembl chr  X:65,514,191...65,515,063 		JBrowse link
G Usp15 ubiquitin specific peptidase 15 involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:33093067)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:33093067 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:58,756,714...58,848,778
Ensembl chr 7:58,756,872...58,848,721 		JBrowse link
G Yod1 YOD1 deubiquitinase involved_in ISO
ISS		 (PMID:23827681)
GO_REF:0000024		 RGD
UniProt		 PMID:23827681 GO_REF:0000024 NCBI chr13:42,175,313...42,177,030
Ensembl chr13:42,174,820...42,177,205 		JBrowse link
protein K29-linked deubiquitination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Otud6a OTU deubiquitinase 6A involved_in ISO
IBA		 (PMID:23827681)
PMID:21873635		 RGD PMID:23827681 PMID:21873635 RGD:13792537 NCBI chr  X:65,514,162...65,515,266
Ensembl chr  X:65,514,191...65,515,063 		JBrowse link
G Tnfaip3 TNF alpha induced protein 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:13,709,211...13,724,291
Ensembl chr 1:13,709,206...13,725,282 		JBrowse link
G Usp13 ubiquitin specific peptidase 13 acts_upstream_of_or_within ISO (PMID:26280536) RGD PMID:26280536 NCBI chr 2:115,576,912...115,689,153
Ensembl chr 2:115,577,091...115,686,222 		JBrowse link
G Yod1 YOD1 deubiquitinase involved_in ISS
ISO		 GO_REF:0000024
(PMID:23827681)		 UniProt
RGD		 PMID:23827681 GO_REF:0000024 NCBI chr13:42,175,313...42,177,030
Ensembl chr13:42,174,820...42,177,205 		JBrowse link
G Zranb1 zinc finger RANBP2-type containing 1 involved_in IBA
ISO		 PMID:21873635
(PMID:23827681), (PMID:25752573), (PMID:25752577)		 RGD PMID:23827681 PMID:25752573 PMID:25752577 PMID:21873635 RGD:13792537 NCBI chr 1:187,725,354...187,780,129
Ensembl chr 1:187,724,320...187,779,655 		JBrowse link
protein K33-linked deubiquitination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Otud6a OTU deubiquitinase 6A involved_in ISO
IBA		 (PMID:23827681)
PMID:21873635		 RGD PMID:23827681 PMID:21873635 RGD:13792537 NCBI chr  X:65,514,162...65,515,266
Ensembl chr  X:65,514,191...65,515,063 		JBrowse link
G Tnfaip3 TNF alpha induced protein 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:13,709,211...13,724,291
Ensembl chr 1:13,709,206...13,725,282 		JBrowse link
G Yod1 YOD1 deubiquitinase involved_in ISO
ISS		 (PMID:23827681)
GO_REF:0000024		 RGD
UniProt		 PMID:23827681 GO_REF:0000024 NCBI chr13:42,175,313...42,177,030
Ensembl chr13:42,174,820...42,177,205 		JBrowse link
G Zranb1 zinc finger RANBP2-type containing 1 involved_in IBA
ISO		 PMID:21873635
(PMID:23827681), (PMID:24768539), (PMID:25752573), (PMID:25752577)		 RGD PMID:23827681 PMID:24768539 PMID:25752573 PMID:25752577 PMID:21873635 RGD:13792537 NCBI chr 1:187,725,354...187,780,129
Ensembl chr 1:187,724,320...187,779,655 		JBrowse link
protein K48-linked deubiquitination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atxn3 ataxin 3 involved_in ISS
ISO		 GO_REF:0000024
(PMID:22970133)		 ParkinsonsUK-UCL
RGD		 PMID:22970133 GO_REF:0000024 NCBI chr 6:121,072,228...121,107,902
Ensembl chr 6:121,074,448...121,107,902 		JBrowse link
G Bap1 Brca1 associated protein 1 involved_in ISO
ISS
IEA		 (PMID:19188440)
GO_REF:0000024
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:19188440 GO_REF:0000024 GO_REF:0000107 NCBI chr16:6,446,709...6,455,535
Ensembl chr16:6,446,709...6,455,535 		JBrowse link
G LOC100910107 ubiquitin carboxyl-terminal hydrolase DUB-1-like involved_in ISO (PMID:19188362), (PMID:20368735) RGD PMID:19188362 PMID:20368735 NCBI chr 1:159,151,417...159,155,192
Ensembl chr 1:159,151,432...159,155,192 		JBrowse link
G Mindy1 MINDY lysine 48 deubiquitinase 1 involved_in IBA
IEA		 PMID:21873635
GO_REF:0000104		 UniProt PMID:21873635 GO_REF:0000104, RGD:13792537 NCBI chr 2:182,859,977...182,873,000
Ensembl chr 2:182,860,472...182,873,015 		JBrowse link
G Mindy2 MINDY lysine 48 deubiquitinase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:71,268,274...71,327,698
Ensembl chr 8:71,256,447...71,328,453 		JBrowse link
G Mindy3 MINDY lysine 48 deubiquitinase 3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr17:75,545,286...75,623,884
Ensembl chr17:75,545,286...75,623,854 		JBrowse link
G Mindy3-ps1 MINDY lysine 48 deubiquitinase 3, pseudogene 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:226,521,817...226,527,142
Ensembl chr 2:226,525,707...226,526,201 		JBrowse link
G Mindy4 MINDY lysine 48 deubiquitinase 4 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:84,358,660...84,469,189
Ensembl chr 4:84,358,902...84,463,395 		JBrowse link
G Mindy4b MINDY family member 4B involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:143,026,685...143,061,966
Ensembl chr 2:143,027,285...143,058,144 		JBrowse link
G Otub1 OTU deubiquitinase, ubiquitin aldehyde binding 1 involved_in ISO
IEA
IBA
ISS		 (PMID:18954305), (PMID:19211026), (PMID:23827681)
GO_REF:0000104
PMID:21873635
GO_REF:0000024		 RGD
UniProt		 PMID:18954305 PMID:19211026 PMID:23827681 PMID:21873635 GO_REF:0000024 GO_REF:0000104, RGD:13792537 NCBI chr 1:204,387,215...204,395,495
Ensembl chr 1:204,387,215...204,395,483 		JBrowse link
G Otub2 OTU deubiquitinase, ubiquitin aldehyde binding 2 involved_in ISO
IBA		 (PMID:18954305), (PMID:23827681)
PMID:21873635		 RGD PMID:18954305 PMID:23827681 PMID:21873635 RGD:13792537 NCBI chr 6:122,545,029...122,563,651
Ensembl chr 6:122,545,061...122,563,644 		JBrowse link
G Otud3 OTU deubiquitinase 3 acts_upstream_of_or_within
involved_in		 ISO
IBA		 (PMID:26280536)
(PMID:35675826)
PMID:21873635		 RGD PMID:26280536 PMID:35675826 PMID:21873635 RGD:13792537 NCBI chr 5:151,135,826...151,162,207
Ensembl chr 5:151,140,059...151,163,560 		JBrowse link
G Otud4 OTU deubiquitinase 4 involved_in ISO (PMID:23827681) RGD PMID:23827681 NCBI chr19:28,236,713...28,279,815
Ensembl chr19:28,236,713...28,279,815 		JBrowse link
G Otud5 OTU deubiquitinase 5 involved_in ISS
ISO		 GO_REF:0000024
(PMID:22245969), (PMID:23827681), (PMID:33523931)		 UniProt
RGD		 PMID:22245969 PMID:23827681 PMID:33523931 GO_REF:0000024 NCBI chr  X:14,626,173...14,659,331
Ensembl chr  X:14,626,164...14,659,573 		JBrowse link
G Otud7a OTU deubiquitinase 7A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:117,064,428...117,388,217
Ensembl chr 1:117,064,496...117,386,480 		JBrowse link
G Otud7b OTU deubiquitinase 7B involved_in ISO
IBA		 (PMID:21097510)
PMID:21873635
(MGI:5474156|PMID:23334419)		 RGD PMID:21097510 PMID:23334419 PMID:21873635 MGI:5474156, RGD:13792537 NCBI chr 2:183,661,955...183,722,584
Ensembl chr 2:183,662,163...183,718,674 		JBrowse link
G RGD1565010 similar to HSPC263 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 7:14,195,783...14,196,918
Ensembl chr 7:14,195,918...14,196,727 		JBrowse link
G Tnfaip3 TNF alpha induced protein 3 involved_in ISO (PMID:23827681) RGD PMID:23827681 NCBI chr 1:13,709,211...13,724,291
Ensembl chr 1:13,709,206...13,725,282 		JBrowse link
G Usp19 ubiquitin specific peptidase 19 involved_in ISO (MGI:5614537|PMID:25088257) RGD PMID:25088257 MGI:5614537 NCBI chr 8:109,190,727...109,201,761
Ensembl chr 8:109,190,724...109,201,741 		JBrowse link
G Usp20 ubiquitin specific peptidase 20 involved_in ISO (PMID:19424180) RGD PMID:19424180 NCBI chr 3:14,272,737...14,306,409
Ensembl chr 3:14,272,908...14,306,409 		JBrowse link
G Usp25 ubiquitin specific peptidase 25 involved_in ISO (PMID:18538659) RGD PMID:18538659 NCBI chr11:15,603,654...15,711,356
Ensembl chr11:15,603,881...15,711,348 		JBrowse link
G Usp27x ubiquitin specific peptidase 27, X-linked involved_in ISO (MGI:5796064|PMID:27013495)
(PMID:31534008)		 RGD PMID:27013495 PMID:31534008 MGI:5796064 NCBI chr  X:15,123,642...15,126,855
Ensembl chr  X:15,124,596...15,125,912 		JBrowse link
G Usp29 ubiquitin specific peptidase 29 involved_in ISO (MGI:6761183|PMID:32457395) RGD PMID:32457395 MGI:6761183 NCBI chr 1:66,874,216...67,097,731
Ensembl chr 1:66,874,017...67,097,686 		JBrowse link
G Usp33 ubiquitin specific peptidase 33 involved_in ISO (PMID:19363159) RGD PMID:19363159 NCBI chr 2:241,283,209...241,328,479
Ensembl chr 2:241,292,985...241,328,479 		JBrowse link
G Usp34 ubiquitin specific peptidase 34 involved_in ISO (PMID:21383061) RGD PMID:21383061 NCBI chr14:97,285,799...97,476,376
Ensembl chr14:97,286,018...97,476,376 		JBrowse link
G Usp37 ubiquitin specific peptidase 37 involved_in ISO (PMID:21596315) RGD PMID:21596315 NCBI chr 9:76,018,863...76,118,732
Ensembl chr 9:76,018,991...76,084,044 		JBrowse link
G Usp5 ubiquitin specific peptidase 5 involved_in ISO (PMID:19098288) RGD PMID:19098288 NCBI chr 4:157,619,643...157,634,711
Ensembl chr 4:157,619,643...157,634,711 		JBrowse link
G Usp50 ubiquitin specific peptidase 50 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:114,012,104...114,035,468
Ensembl chr 3:114,011,702...114,035,476 		JBrowse link
G Usp8 ubiquitin specific peptidase 8 involved_in ISO
IBA		 (PMID:16520378)
PMID:21873635		 RGD PMID:16520378 PMID:21873635 RGD:13792537 NCBI chr 3:113,962,136...114,009,683
Ensembl chr 3:113,962,164...114,009,666 		JBrowse link
G Vcpip1 valosin containing protein interacting protein 1 involved_in IBA
ISS
ISO		 PMID:21873635
GO_REF:0000024
(PMID:23827681)		 UniProt
RGD		 PMID:23827681 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 5:9,534,247...9,560,889
Ensembl chr 5:9,534,129...9,562,040 		JBrowse link
G Yod1 YOD1 deubiquitinase involved_in ISO
ISS		 (PMID:19818707), (PMID:21376232), (PMID:24068323), (PMID:27753622)
GO_REF:0000024		 RGD
UniProt		 PMID:19818707 PMID:21376232 PMID:24068323 PMID:27753622 GO_REF:0000024 NCBI chr13:42,175,313...42,177,030
Ensembl chr13:42,174,820...42,177,205 		JBrowse link
protein K6-linked deubiquitination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Otud3 OTU deubiquitinase 3 involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:23827681)
PMID:21873635
(PMID:26280536)		 RGD PMID:23827681 PMID:26280536 PMID:21873635 RGD:13792537 NCBI chr 5:151,135,826...151,162,207
Ensembl chr 5:151,140,059...151,163,560 		JBrowse link
G Usp13 ubiquitin specific peptidase 13 acts_upstream_of_or_within ISO (PMID:26280536) RGD PMID:26280536 NCBI chr 2:115,576,912...115,689,153
Ensembl chr 2:115,577,091...115,686,222 		JBrowse link
G Usp30 ubiquitin specific peptidase 30 involved_in ISO
ISS		 (PMID:25621951)
GO_REF:0000024		 RGD
UniProt		 PMID:25621951 GO_REF:0000024 NCBI chr12:42,501,345...42,555,311
Ensembl chr12:42,501,348...42,555,616 		JBrowse link
protein K63-linked deubiquitination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abraxas1 abraxas 1, BRCA1 A complex subunit involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:8,796,281...8,810,625
Ensembl chr14:8,796,266...8,810,622 		JBrowse link
G Abraxas2 abraxas 2, BRISC complex subunit involved_in ISO
IBA		 (PMID:24075985), (PMID:26195665)
(MGI:5528747|PMID:24075985), (MGI:5700295|PMID:21195082)
PMID:21873635		 RGD PMID:21195082 PMID:24075985 PMID:26195665 PMID:21873635 MGI:5528747 MGI:5700295, RGD:13792537 NCBI chr 1:187,647,078...187,672,660
Ensembl chr 1:187,647,067...187,672,655 		JBrowse link
G Atxn3 ataxin 3 involved_in ISO
ISS		 (PMID:22970133)
GO_REF:0000024		 RGD
ParkinsonsUK-UCL		 PMID:22970133 GO_REF:0000024 NCBI chr 6:121,072,228...121,107,902
Ensembl chr 6:121,074,448...121,107,902 		JBrowse link
G Babam1 BRISC and BRCA1 A complex member 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:18,068,830...18,074,938
Ensembl chr16:18,068,884...18,074,923 		JBrowse link
G Brcc3 BRCA1/BRCA2-containing complex, subunit 3 involved_in ISS
ISO		 GO_REF:0000024
(MGI:7387171|PMID:23246432)
(PMID:17525341), (PMID:19214193), (PMID:24075985)		 UniProt
RGD		 PMID:17525341 PMID:19214193 PMID:23246432 PMID:24075985 GO_REF:0000024 MGI:7387171 NCBI chr 9:1,986,942...1,989,484
Ensembl chr 9:1,986,575...1,991,080 		JBrowse link
G Cyld CYLD lysine 63 deubiquitinase involved_in ISO
IBA		 (MGI:6162308|PMID:29291351)
PMID:21873635		 RGD PMID:29291351 PMID:21873635 MGI:6162308, RGD:13792537 NCBI chr19:18,310,632...18,373,696
Ensembl chr19:18,314,019...18,373,658 		JBrowse link
G LOC100910107 ubiquitin carboxyl-terminal hydrolase DUB-1-like involved_in ISO (PMID:19188362), (PMID:20368735) RGD PMID:19188362 PMID:20368735 NCBI chr 1:159,151,417...159,155,192
Ensembl chr 1:159,151,432...159,155,192 		JBrowse link
G Otub2 OTU deubiquitinase, ubiquitin aldehyde binding 2 involved_in ISO
IBA		 (PMID:18954305), (PMID:23827681)
PMID:21873635		 RGD PMID:18954305 PMID:23827681 PMID:21873635 RGD:13792537 NCBI chr 6:122,545,029...122,563,651
Ensembl chr 6:122,545,061...122,563,644 		JBrowse link
G Otud1 OTU deubiquitinase 1 involved_in ISO
IBA		 (PMID:23827681)
PMID:21873635		 RGD PMID:23827681 PMID:21873635 RGD:13792537 NCBI chr17:82,259,881...82,262,774
Ensembl chr17:82,259,840...82,262,995 		JBrowse link
G Otud4 OTU deubiquitinase 4 involved_in ISO (PMID:29395066)
(MGI:6120140|PMID:29395066)		 RGD PMID:29395066 MGI:6120140 NCBI chr19:28,236,713...28,279,815
Ensembl chr19:28,236,713...28,279,815 		JBrowse link
G Otud5 OTU deubiquitinase 5 involved_in ISO
ISS		 (PMID:22245969), (PMID:23827681), (PMID:33523931)
GO_REF:0000024		 RGD
UniProt		 PMID:22245969 PMID:23827681 PMID:33523931 GO_REF:0000024 NCBI chr  X:14,626,173...14,659,331
Ensembl chr  X:14,626,164...14,659,573 		JBrowse link
G Otud7a OTU deubiquitinase 7A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:117,064,428...117,388,217
Ensembl chr 1:117,064,496...117,386,480 		JBrowse link
G Otud7b OTU deubiquitinase 7B involved_in ISO
IBA		 (PMID:20622874)
PMID:21873635		 RGD PMID:20622874 PMID:21873635 RGD:13792537 NCBI chr 2:183,661,955...183,722,584
Ensembl chr 2:183,662,163...183,718,674 		JBrowse link
G Psmd14 proteasome 26S subunit, non-ATPase 14 involved_in ISO (PMID:22909820) RGD PMID:22909820 NCBI chr 3:46,254,338...46,347,076
Ensembl chr 3:46,254,330...46,347,076 		JBrowse link
G Shmt2 serine hydroxymethyltransferase 2 involved_in ISO (PMID:24075985) RGD PMID:24075985 NCBI chr 7:63,358,961...63,364,293
Ensembl chr 7:63,358,961...63,364,236 		JBrowse link
G Spata2 spermatogenesis associated 2 involved_in IBA
ISS
ISO		 PMID:21873635
GO_REF:0000024
(PMID:27458237), (PMID:27591049)		 UniProt
RGD		 PMID:27458237 PMID:27591049 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 3:156,202,962...156,213,283
Ensembl chr 3:156,202,967...156,211,705 		JBrowse link
G Stambp Stam binding protein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:116,055,563...116,083,563
Ensembl chr 4:116,056,057...116,080,543 		JBrowse link
G Stambpl1 STAM binding protein-like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:231,699,620...231,745,034
Ensembl chr 1:231,699,995...231,745,032 		JBrowse link
G Tnfaip3 TNF alpha induced protein 3 involved_in
acts_upstream_of_or_within		 ISO (PMID:15258597)
(MGI:5562489|PMID:24012418)		 RGD PMID:15258597 PMID:24012418 MGI:5562489 NCBI chr 1:13,709,211...13,724,291
Ensembl chr 1:13,709,206...13,725,282 		JBrowse link
G Usp13 ubiquitin specific peptidase 13 involved_in
acts_upstream_of_or_within		 ISO (PMID:22216260)
(PMID:26280536)		 RGD PMID:22216260 PMID:26280536 NCBI chr 2:115,576,912...115,689,153
Ensembl chr 2:115,577,091...115,686,222 		JBrowse link
G Usp20 ubiquitin specific peptidase 20 involved_in ISO (PMID:19424180) RGD PMID:19424180 NCBI chr 3:14,272,737...14,306,409
Ensembl chr 3:14,272,908...14,306,409 		JBrowse link
G Usp25 ubiquitin specific peptidase 25 involved_in ISO (PMID:18538659) RGD PMID:18538659 NCBI chr11:15,603,654...15,711,356
Ensembl chr11:15,603,881...15,711,348 		JBrowse link
G Usp27x ubiquitin specific peptidase 27, X-linked involved_in ISO (MGI:5796064|PMID:27013495) RGD PMID:27013495 MGI:5796064 NCBI chr  X:15,123,642...15,126,855
Ensembl chr  X:15,124,596...15,125,912 		JBrowse link
G Usp33 ubiquitin specific peptidase 33 involved_in ISO (PMID:19363159) RGD PMID:19363159 NCBI chr 2:241,283,209...241,328,479
Ensembl chr 2:241,292,985...241,328,479 		JBrowse link
G Usp50 ubiquitin specific peptidase 50 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:114,012,104...114,035,468
Ensembl chr 3:114,011,702...114,035,476 		JBrowse link
G Usp7 ubiquitin specific peptidase 7 involved_in ISO (PMID:28655758) UniProt PMID:28655758 NCBI chr10:6,880,684...6,925,033
Ensembl chr10:6,828,795...6,925,355 		JBrowse link
G Usp8 ubiquitin specific peptidase 8 involved_in ISO
IBA		 (PMID:16520378)
PMID:21873635		 RGD PMID:16520378 PMID:21873635 RGD:13792537 NCBI chr 3:113,962,136...114,009,683
Ensembl chr 3:113,962,164...114,009,666 		JBrowse link
G Usp9x ubiquitin specific peptidase 9, X-linked involved_in ISO (PMID:33378666) RGD PMID:33378666 NCBI chr  X:9,588,825...9,726,993
Ensembl chr  X:9,588,825...9,696,711 		JBrowse link
G Yod1 YOD1 deubiquitinase involved_in ISO
ISS		 (PMID:19818707), (PMID:24068323)
GO_REF:0000024		 RGD
UniProt		 PMID:19818707 PMID:24068323 GO_REF:0000024 NCBI chr13:42,175,313...42,177,030
Ensembl chr13:42,174,820...42,177,205 		JBrowse link
G Zranb1 zinc finger RANBP2-type containing 1 involved_in ISO (PMID:18281465), (PMID:23827681) RGD PMID:18281465 PMID:23827681 NCBI chr 1:187,725,354...187,780,129
Ensembl chr 1:187,724,320...187,779,655 		JBrowse link
protein linear deubiquitination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyld CYLD lysine 63 deubiquitinase involved_in ISO
ISS		 (PMID:26997266), (PMID:27458237), (PMID:27591049)
(MGI:5912943|PMID:28701375)
GO_REF:0000024		 RGD
UniProt		 PMID:26997266 PMID:27458237 PMID:27591049 PMID:28701375 GO_REF:0000024 MGI:5912943 NCBI chr19:18,310,632...18,373,696
Ensembl chr19:18,314,019...18,373,658 		JBrowse link
G Otulin OTU deubiquitinase with linear linkage specificity involved_in IBA
ISO		 PMID:21873635
(MGI:5494328|PMID:23708998), (MGI:5804663|PMID:27523608), (MGI:6192867|PMID:29950720)
(PMID:23746843), (PMID:23806334), (PMID:23827681), (PMID:24726323), (PMID:24726327), (PMID:26997266), (PMID:27523608), (PMID:27559085)		 RGD PMID:23708998 PMID:23746843 PMID:23806334 PMID:23827681 PMID:24726323 More... MGI:5494328 MGI:5804663 MGI:6192867, RGD:13792537 NCBI chr 2:78,290,437...78,316,633
Ensembl chr 2:78,290,959...78,316,422 		JBrowse link
G Spata2 spermatogenesis associated 2 involved_in ISO
IBA
ISS		 (PMID:27458237), (PMID:27591049)
(MGI:5912943|PMID:28701375)
PMID:21873635
GO_REF:0000024		 RGD
UniProt		 PMID:27458237 PMID:27591049 PMID:28701375 PMID:21873635 GO_REF:0000024 MGI:5912943, RGD:13792537 NCBI chr 3:156,202,962...156,213,283
Ensembl chr 3:156,202,967...156,211,705 		JBrowse link
regulation of protein deubiquitination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Itch itchy E3 ubiquitin protein ligase involved_in ISO (MGI:3774677|PMID:18246070) RGD PMID:18246070 MGI:3774677 NCBI chr 3:143,642,348...143,733,745
Ensembl chr 3:143,645,637...143,733,543 		JBrowse link
regulation of protein K48-linked deubiquitination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Otud4 OTU deubiquitinase 4 involved_in IBA
ISO		 PMID:21873635
(PMID:25944111)		 RGD PMID:25944111 PMID:21873635 RGD:13792537 NCBI chr19:28,236,713...28,279,815
Ensembl chr19:28,236,713...28,279,815 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19748
    metabolic process 12047
      primary metabolic process 10827
        protein metabolic process 5955
          proteolysis 1876
            protein modification by small protein removal 167
              protein deneddylation + 11
              protein desumoylation + 14
              protein deubiquitination + 143
Path 2
Term Annotations click to browse term
  biological_process 19748
    metabolic process 12047
      organic substance metabolic process 11599
        macromolecule metabolic process 9961
          protein metabolic process 5955
            protein modification process 3558
              protein modification by small protein conjugation or removal 961
                protein modification by small protein removal 167
                  protein deneddylation + 11
                  protein desumoylation + 14
                  protein deubiquitination + 143
paths to the root