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ONTOLOGY REPORT - ANNOTATIONS

Term:vitamin D response element binding
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Accession:GO:0070644 term browser browse the term
Definition:Binding to a vitamin D response element (VDRE), a short sequence with dyad symmetry found in the promoters of some of the cellular immediate-early genes, regulated by serum.
Synonyms:exact_synonym: VDRE binding

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vitamin D response element binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rxra retinoid X receptor alpha contributes_to
enables		 ISO
IEA		 (PMID:17426122) BHF-UCL
Ensembl		 PMID:17426122 GO_REF:0000107 NCBI chrNW_004936669:2,735,111...2,763,060
Ensembl chrNW_004936669:2,738,448...2,763,070 		JBrowse link
G Tcf3 transcription factor 3 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:884,817...913,052
Ensembl chrNW_004936588:884,789...912,753 		JBrowse link
G Vdr vitamin D receptor contributes_to
enables		 ISO
IEA		 (PMID:17426122) BHF-UCL
Ensembl
TreeGrafter		 PMID:17426122 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936512:5,741,836...5,800,999
Ensembl chrNW_004936512:5,740,748...5,801,109 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 17143
    binding 15467
      organic cyclic compound binding 4935
        nucleic acid binding 3003
          transcription regulatory region nucleic acid binding 1120
            transcription cis-regulatory region binding 1115
              RNA polymerase II transcription regulatory region sequence-specific DNA binding 1009
                RNA polymerase II cis-regulatory region sequence-specific DNA binding 886
                  vitamin D response element binding 3
Path 2
Term Annotations click to browse term
  molecular_function 17143
    binding 15467
      organic cyclic compound binding 4935
        nucleic acid binding 3003
          DNA binding 1912
            sequence-specific DNA binding 1298
              sequence-specific double-stranded DNA binding 1190
                transcription cis-regulatory region binding 1115
                  RNA polymerase II transcription regulatory region sequence-specific DNA binding 1009
                    RNA polymerase II cis-regulatory region sequence-specific DNA binding 886
                      vitamin D response element binding 3
paths to the root