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ONTOLOGY REPORT - ANNOTATIONS

Term:vitamin D response element binding
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Accession:GO:0070644 term browser browse the term
Definition:Binding to a vitamin D response element (VDRE), a short sequence with dyad symmetry found in the promoters of some of the cellular immediate-early genes, regulated by serum.
Synonyms:exact_synonym: VDRE binding


show annotations for term's descendants           Sort by:
vitamin D response element binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rxra retinoid X receptor alpha contributes_to
enables		 ISO
IEA		 (PMID:17426122)
GO_REF:0000107		 RGD
Ensembl		 PMID:17426122 GO_REF:0000107 NCBI chr 3:10,989,832...11,076,366
Ensembl chr 3:10,989,832...11,073,712 		JBrowse link
G Tcf3 transcription factor 3 enables ISO
IEA		 (PMID:17426122)
GO_REF:0000107		 RGD
Ensembl		 PMID:17426122 GO_REF:0000107 NCBI chr 7:9,280,571...9,302,315
Ensembl chr 7:9,280,571...9,302,314 		JBrowse link
G Vdr vitamin D receptor contributes_to
enables		 ISO
IEA
IBA		 (PMID:17426122)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:17426122 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:128,987,981...129,037,677
Ensembl chr 7:128,987,981...129,037,677 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 20732
    binding 17791
      organic cyclic compound binding 6221
        nucleic acid binding 3870
          transcription regulatory region nucleic acid binding 1302
            transcription cis-regulatory region binding 1297
              RNA polymerase II transcription regulatory region sequence-specific DNA binding 1189
                RNA polymerase II cis-regulatory region sequence-specific DNA binding 1020
                  vitamin D response element binding 3
Path 2
Term Annotations click to browse term
  molecular_function 20732
    binding 17791
      organic cyclic compound binding 6221
        nucleic acid binding 3870
          DNA binding 2302
            sequence-specific DNA binding 1472
              sequence-specific double-stranded DNA binding 1361
                transcription cis-regulatory region binding 1297
                  RNA polymerase II transcription regulatory region sequence-specific DNA binding 1189
                    RNA polymerase II cis-regulatory region sequence-specific DNA binding 1020
                      vitamin D response element binding 3
paths to the root