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ONTOLOGY REPORT - ANNOTATIONS

Term:vitamin D response element binding
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Accession:GO:0070644 term browser browse the term
Definition:Binding to a vitamin D response element (VDRE), a short sequence with dyad symmetry found in the promoters of some of the cellular immediate-early genes, regulated by serum.
Synonyms:exact_synonym: VDRE binding


show annotations for term's descendants           Sort by:
vitamin D response element binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RXRA retinoid X receptor alpha contributes_to
enables		 ISO
IEA		 (PMID:17426122) BHF-UCL
Ensembl		 PMID:17426122 GO_REF:0000107 NCBI chr 1:273,698,842...273,797,622
Ensembl chr 1:273,705,505...273,797,620 		JBrowse link
G TCF3 transcription factor 3 enables IEA Ensembl GO_REF:0000107 NCBI chr 2:76,859,079...76,906,275
Ensembl chr 2:76,859,089...76,898,351 		JBrowse link
G VDR vitamin D receptor contributes_to IBA GO_Central GO_REF:0000033 NCBI chr 5:78,205,807...78,266,505
Ensembl chr 5:78,205,810...78,266,475 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 18628
    binding 16150
      organic cyclic compound binding 5426
        nucleic acid binding 3396
          transcription regulatory region nucleic acid binding 1219
            transcription cis-regulatory region binding 1214
              RNA polymerase II transcription regulatory region sequence-specific DNA binding 1115
                RNA polymerase II cis-regulatory region sequence-specific DNA binding 952
                  vitamin D response element binding 3
Path 2
Term Annotations click to browse term
  molecular_function 18628
    binding 16150
      organic cyclic compound binding 5426
        nucleic acid binding 3396
          DNA binding 2168
            sequence-specific DNA binding 1422
              sequence-specific double-stranded DNA binding 1298
                transcription cis-regulatory region binding 1214
                  RNA polymerase II transcription regulatory region sequence-specific DNA binding 1115
                    RNA polymerase II cis-regulatory region sequence-specific DNA binding 952
                      vitamin D response element binding 3
paths to the root