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ONTOLOGY REPORT - ANNOTATIONS

Term:vitamin D response element binding
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Accession:GO:0070644 term browser browse the term
Definition:Binding to a vitamin D response element (VDRE), a short sequence with dyad symmetry found in the promoters of some of the cellular immediate-early genes, regulated by serum.
Synonyms:exact_synonym: VDRE binding

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vitamin D response element binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rxra retinoid X receptor alpha contributes_to ISO (PMID:17426122) BHF-UCL PMID:17426122 NCBI chrNW_004624760:2,379,809...2,455,749
Ensembl chrNW_004624760:2,380,708...2,456,928 		JBrowse link
G Tcf3 transcription factor 3 enables ISO (PMID:17426122) BHF-UCL PMID:17426122 NCBI chrNW_004624828:7,090,562...7,119,970
Ensembl chrNW_004624828:7,090,605...7,121,428 		JBrowse link
G Vdr vitamin D receptor enables
contributes_to		 IEA
ISO		 (PMID:17426122) TreeGrafter
BHF-UCL		 PMID:17426122 GO_REF:0000118 NCBI chrNW_004624816:4,314,146...4,423,946
Ensembl chrNW_004624816:4,365,961...4,424,514 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 16326
    binding 14870
      organic cyclic compound binding 4585
        nucleic acid binding 2823
          transcription regulatory region nucleic acid binding 967
            transcription cis-regulatory region binding 962
              RNA polymerase II transcription regulatory region sequence-specific DNA binding 861
                RNA polymerase II cis-regulatory region sequence-specific DNA binding 728
                  vitamin D response element binding 3
Path 2
Term Annotations click to browse term
  molecular_function 16326
    binding 14870
      organic cyclic compound binding 4585
        nucleic acid binding 2823
          DNA binding 1788
            sequence-specific DNA binding 1195
              sequence-specific double-stranded DNA binding 1083
                transcription cis-regulatory region binding 962
                  RNA polymerase II transcription regulatory region sequence-specific DNA binding 861
                    RNA polymerase II cis-regulatory region sequence-specific DNA binding 728
                      vitamin D response element binding 3
paths to the root