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ONTOLOGY REPORT - ANNOTATIONS

Term:vitamin D response element binding
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Accession:GO:0070644 term browser browse the term
Definition:Binding to a vitamin D response element (VDRE), a short sequence with dyad symmetry found in the promoters of some of the cellular immediate-early genes, regulated by serum.
Synonyms:exact_synonym: VDRE binding

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vitamin D response element binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RXRA retinoid X receptor alpha contributes_to ISO (PMID:17426122) BHF-UCL PMID:17426122 NCBI chr12:3,704,129...3,814,707
Ensembl chr12:3,699,923...3,814,678 		JBrowse link
G TCF3 transcription factor 3 enables ISO (PMID:17426122) BHF-UCL PMID:17426122 NCBI chr 6:1,393,147...1,440,515
Ensembl chr 6:1,393,107...1,440,479 		JBrowse link
G VDR vitamin D receptor contributes_to
enables		 ISO
IEA		 (PMID:17426122) BHF-UCL
TreeGrafter
Ensembl		 PMID:17426122 GO_REF:0000107 GO_REF:0000118 NCBI chr11:44,062,198...44,126,295
Ensembl chr11:44,065,457...44,166,684 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 18118
    binding 16629
      organic cyclic compound binding 5333
        nucleic acid binding 3379
          transcription regulatory region nucleic acid binding 1274
            transcription cis-regulatory region binding 1269
              RNA polymerase II transcription regulatory region sequence-specific DNA binding 1163
                RNA polymerase II cis-regulatory region sequence-specific DNA binding 1018
                  vitamin D response element binding 3
Path 2
Term Annotations click to browse term
  molecular_function 18118
    binding 16629
      organic cyclic compound binding 5333
        nucleic acid binding 3379
          DNA binding 2171
            sequence-specific DNA binding 1490
              sequence-specific double-stranded DNA binding 1363
                transcription cis-regulatory region binding 1269
                  RNA polymerase II transcription regulatory region sequence-specific DNA binding 1163
                    RNA polymerase II cis-regulatory region sequence-specific DNA binding 1018
                      vitamin D response element binding 3
paths to the root