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ONTOLOGY REPORT - ANNOTATIONS


Term:vitamin D response element binding
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Accession:GO:0070644 term browser browse the term
Definition:Binding to a vitamin D response element (VDRE), a short sequence with dyad symmetry found in the promoters of some of the cellular immediate-early genes, regulated by serum.
Synonyms:exact_synonym: VDRE binding


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vitamin D response element binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rxra retinoid X receptor alpha contributes_to ISO (PMID:17426122) BHF-UCL PMID:17426122 NCBI chrNW_004955513:3,313,544...3,386,544
Ensembl chrNW_004955513:3,335,897...3,386,994
JBrowse link
G Tcf3 transcription factor 3 enables ISO (PMID:17426122) BHF-UCL PMID:17426122 NCBI chrNW_004955495:6,337,311...6,365,193
Ensembl chrNW_004955495:6,337,870...6,367,487
JBrowse link
G Vdr vitamin D receptor contributes_to ISO (PMID:17426122) BHF-UCL PMID:17426122 NCBI chrNW_004955500:6,745,725...6,798,052
Ensembl chrNW_004955500:6,745,678...6,798,048
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 14353
    binding 13645
      organic cyclic compound binding 2580
        nucleic acid binding 1885
          transcription regulatory region nucleic acid binding 804
            transcription cis-regulatory region binding 799
              RNA polymerase II transcription regulatory region sequence-specific DNA binding 687
                RNA polymerase II cis-regulatory region sequence-specific DNA binding 547
                  vitamin D response element binding 3
Path 2
Term Annotations click to browse term
  molecular_function 14353
    binding 13645
      organic cyclic compound binding 2580
        nucleic acid binding 1885
          DNA binding 1362
            sequence-specific DNA binding 1066
              sequence-specific double-stranded DNA binding 968
                transcription cis-regulatory region binding 799
                  RNA polymerase II transcription regulatory region sequence-specific DNA binding 687
                    RNA polymerase II cis-regulatory region sequence-specific DNA binding 547
                      vitamin D response element binding 3
paths to the root