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ONTOLOGY REPORT - ANNOTATIONS

Term:vitamin D response element binding
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Accession:GO:0070644 term browser browse the term
Definition:Binding to a vitamin D response element (VDRE), a short sequence with dyad symmetry found in the promoters of some of the cellular immediate-early genes, regulated by serum.
Synonyms:exact_synonym: VDRE binding


show annotations for term's descendants           Sort by:
vitamin D response element binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RXRA retinoid X receptor alpha contributes_to
enables		 ISO
IEA		 (PMID:17426122) BHF-UCL
Ensembl		 PMID:17426122 GO_REF:0000107 NCBI chr 9:105,424,046...105,539,241
Ensembl chr 9:134,082,865...134,144,704 		JBrowse link
G TCF3 transcription factor 3 enables IEA Ensembl GO_REF:0000107 Ensembl chr19:1,582,297...1,622,025 JBrowse link
G VDR vitamin D receptor contributes_to
enables		 ISO
IEA		 (PMID:17426122) BHF-UCL
TreeGrafter
Ensembl		 PMID:17426122 GO_REF:0000107 GO_REF:0000118 NCBI chr12:40,828,413...40,891,700
Ensembl chr12:41,702,742...41,766,192 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 17720
    binding 16372
      organic cyclic compound binding 5268
        nucleic acid binding 3309
          transcription regulatory region nucleic acid binding 1226
            transcription cis-regulatory region binding 1221
              RNA polymerase II transcription regulatory region sequence-specific DNA binding 1114
                RNA polymerase II cis-regulatory region sequence-specific DNA binding 981
                  vitamin D response element binding 3
Path 2
Term Annotations click to browse term
  molecular_function 17720
    binding 16372
      organic cyclic compound binding 5268
        nucleic acid binding 3309
          DNA binding 2108
            sequence-specific DNA binding 1455
              sequence-specific double-stranded DNA binding 1327
                transcription cis-regulatory region binding 1221
                  RNA polymerase II transcription regulatory region sequence-specific DNA binding 1114
                    RNA polymerase II cis-regulatory region sequence-specific DNA binding 981
                      vitamin D response element binding 3
paths to the root