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ONTOLOGY REPORT - ANNOTATIONS


Term:vitamin D3 metabolic process
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Accession:GO:0070640 term browser browse the term
Definition:The chemical reactions and pathways involving vitamin D3, (3S,5Z,7E)-9,10-secocholesta-5,7,10(19)-trien-3-ol.
Synonyms:exact_synonym: calciol metabolic process;   cholecalciferol metabolic process;   vitamin D3 metabolism



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vitamin D3 metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (MGI:6282476|PMID:28798354) MGI PMID:28798354 MGI:6282476 NCBI chr 1:31,724,290...31,796,594
Ensembl chr 1:31,722,721...31,796,595
JBrowse link
G FGFR1 fibroblast growth factor receptor 1 acts_upstream_of_or_within ISO (MGI:5548021|PMID:24259513) MGI PMID:24259513 MGI:5548021 NCBI chr15:48,053,895...48,106,634
Ensembl chr15:48,053,340...48,106,746
JBrowse link
G FGFR4 fibroblast growth factor receptor 4 acts_upstream_of_or_within ISO (MGI:5548021|PMID:24259513) MGI PMID:24259513 MGI:5548021 NCBI chr 2:80,841,536...80,853,791
Ensembl chr 2:80,841,536...80,853,796
JBrowse link
G UGT1A6 UDP glucuronosyltransferase 1 family, polypeptide A6 involved_in ISO (PMID:23756265) UniProt PMID:23756265 NCBI chr15:133,968,693...134,049,029 JBrowse link
calcitriol biosynthetic process from calciol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP27A1 cytochrome P450 family 27 subfamily A member 1 involved_in IBA
IEA
(PMID:21873635) GO_Central
GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr15:120,809,886...120,852,196
Ensembl chr15:120,809,959...120,852,193
JBrowse link
G CYP27B1 cytochrome P450 family 27 subfamily B member 1 involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr 5:23,053,129...23,058,865
Ensembl chr 5:23,050,114...23,058,470
JBrowse link
G CYP2D6 cytochrome P450 family 2 subfamily D member 6 involved_in IEA GOC
GOC
GO_REF:0000108 NCBI chr 5:6,539,021...6,543,643
Ensembl chr 5:6,538,907...6,543,643
JBrowse link
G CYP2R1 cytochrome P450 family 2 subfamily R member 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 2:44,375,432...44,394,122
Ensembl chr 2:44,375,520...44,396,367
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16975
    metabolic process 10639
      small molecule metabolic process 1637
        alcohol metabolic process 332
          secondary alcohol metabolic process 139
            vitamin D3 metabolic process 8
              calcitriol biosynthetic process from calciol 4
              vitamin D3 biosynthetic process 0
              vitamin D3 catabolic process 0
Path 2
Term Annotations click to browse term
  biological_process 16975
    metabolic process 10639
      small molecule metabolic process 1637
        vitamin metabolic process 83
          fat-soluble vitamin metabolic process 36
            vitamin D metabolic process 17
              vitamin D3 metabolic process 8
                calcitriol biosynthetic process from calciol 4
                vitamin D3 biosynthetic process 0
                vitamin D3 catabolic process 0
paths to the root