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ONTOLOGY REPORT - ANNOTATIONS


Term:vitamin D3 metabolic process
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Accession:GO:0070640 term browser browse the term
Definition:The chemical reactions and pathways involving vitamin D3, (3S,5Z,7E)-9,10-secocholesta-5,7,10(19)-trien-3-ol.
Synonyms:exact_synonym: calciol metabolic process;   cholecalciferol metabolic process;   vitamin D3 metabolism



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vitamin D3 metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (PMID:28798354) MGI PMID:28798354 NCBI chr 6:129,591,858...129,673,000
Ensembl chr 6:133,698,640...133,783,644
JBrowse link
G FGFR1 fibroblast growth factor receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24259513) Ensembl
MGI
PMID:24259513 GO_REF:0000107 NCBI chr 8:37,713,133...37,773,098
Ensembl chr 8:34,890,147...34,948,904
JBrowse link
G FGFR4 fibroblast growth factor receptor 4 acts_upstream_of_or_within ISO (PMID:24259513) MGI PMID:24259513 NCBI chr 5:172,386,443...172,400,271
Ensembl chr 5:179,454,995...179,467,605
JBrowse link
G LOC100975751 UDP-glucuronosyltransferase 1A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:120,900,855...121,028,232
Ensembl chr2B:239,755,364...239,900,135
JBrowse link
calcitriol biosynthetic process from calciol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP27A1 cytochrome P450 family 27 subfamily A member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:106,042,235...106,076,840
Ensembl chr2B:224,637,238...224,671,474
JBrowse link
G CYP27B1 cytochrome P450 family 27 subfamily B member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:31,158,814...31,164,462
Ensembl chr12:31,419,773...31,424,822
JBrowse link
G CYP2R1 cytochrome P450 family 2 subfamily R member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:14,960,651...14,989,083
Ensembl chr11:14,656,939...14,671,584
JBrowse link
G CYP3A4 cytochrome P450 family 3 subfamily A member 4 involved_in IEA GOC GO_REF:0000108 NCBI chr 7:91,797,037...91,824,696
Ensembl chr 7:105,230,666...105,258,401
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19380
    cellular process 18938
      metabolic process 12887
        small molecule metabolic process 1666
          alcohol metabolic process 344
            secondary alcohol metabolic process 149
              vitamin D3 metabolic process 8
                calcitriol biosynthetic process from calciol 4
                vitamin D3 biosynthetic process 0
                vitamin D3 catabolic process 0
Path 2
Term Annotations click to browse term
  biological_process 19380
    cellular process 18938
      metabolic process 12887
        small molecule metabolic process 1666
          vitamin metabolic process 98
            fat-soluble vitamin metabolic process 45
              vitamin D metabolic process 19
                vitamin D3 metabolic process 8
                  calcitriol biosynthetic process from calciol 4
                  vitamin D3 biosynthetic process 0
                  vitamin D3 catabolic process 0
paths to the root