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ONTOLOGY REPORT - ANNOTATIONS


Term:cellular response to cold
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Accession:GO:0070417 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism.
Synonyms:exact_synonym: cellular response to cold stress



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cellular response to cold term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ces1d carboxylesterase 1D acts_upstream_of_or_within ISO (MGI:6306193|PMID:30862682) RGD PMID:30862682 MGI:6306193 NCBI chr19:13,873,490...13,912,035
Ensembl chr19:13,796,623...13,912,035
JBrowse link
G Cidea cell death-inducing DFFA-like effector a involved_in ISO (MGI:5914794|PMID:28763438) RGD PMID:28763438 MGI:5914794 NCBI chr18:60,894,917...60,920,485
Ensembl chr18:60,894,874...60,920,481
JBrowse link
G Cirbp cold inducible RNA binding protein acts_upstream_of_or_within ISO (MGI:87836|PMID:9151692) RGD PMID:9151692 MGI:87836 NCBI chr 7:9,533,857...9,538,899
Ensembl chr 7:9,424,178...9,538,818
JBrowse link
G Dnajc3 DnaJ heat shock protein family (Hsp40) member C3 involved_in ISS
ISO
GO_REF:0000024
(MGI:5617428|PMID:25329545)
UniProt
RGD
PMID:25329545 GO_REF:0000024 MGI:5617428 NCBI chr15:96,025,729...96,065,114
Ensembl chr15:96,025,624...96,065,181
JBrowse link
G Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:25329545)
UniProt
RGD
PMID:25329545 GO_REF:0000024 NCBI chr 4:102,805,495...102,866,914
Ensembl chr 4:102,805,510...102,866,911
JBrowse link
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 involved_in ISO (PMID:25329545) RGD PMID:25329545 NCBI chr 3:105,356,261...105,441,630
Ensembl chr 3:105,356,261...105,441,630
JBrowse link
G Lipe lipase E, hormone sensitive type acts_upstream_of_or_within ISO (MGI:6306193|PMID:30862682) RGD PMID:30862682 MGI:6306193 NCBI chr 1:80,965,612...80,984,313
Ensembl chr 1:80,965,627...80,984,310
JBrowse link
G Nfe2l1 NFE2 like bZIP transcription factor 1 acts_upstream_of_or_within ISO MGI:6101514 (MGI:6198859|PMID:29400713) RGD PMID:29400713 MGI:6198859 NCBI chr10:81,796,055...81,812,926
Ensembl chr10:81,800,366...81,832,318
JBrowse link
G Plin1 perilipin 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:6306193|PMID:30862682)
GO_REF:0000107
RGD
Ensembl
PMID:30862682 GO_REF:0000107 MGI:6306193 NCBI chr 1:133,664,294...133,676,854
Ensembl chr 1:133,664,892...133,676,828
JBrowse link
G Prkaca protein kinase cAMP-activated catalytic subunit alpha acts_upstream_of_or_within ISO (MGI:6306193|PMID:30862682) RGD PMID:30862682 MGI:6306193 NCBI chr19:24,155,081...24,178,430
Ensembl chr19:24,155,090...24,178,430
JBrowse link
G Rnf34 ring finger protein 34 involved_in ISO (MGI:5582154|PMID:22064484) RGD PMID:22064484 MGI:5582154 NCBI chr12:33,703,655...33,724,606
Ensembl chr12:33,703,673...33,724,586
JBrowse link
G Saxo1 stabilizer of axonemal microtubules 1 involved_in ISO (PMID:25673876) RGD PMID:25673876 NCBI chr 5:100,937,134...101,093,308
Ensembl chr 5:100,937,130...101,093,281
JBrowse link
G Saxol1 stabilizer of axonemal microtubules like 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr  X:27,973,442...27,975,599 JBrowse link
G Slc9a1 solute carrier family 9 member A1 IEP RGD PMID:15452191 RGD:1625557 NCBI chr 5:145,576,341...145,629,630
Ensembl chr 5:145,576,334...145,629,624
JBrowse link
G Trpa1 transient receptor potential cation channel, subfamily A, member 1 IMP RGD PMID:21068322 RGD:10043615 NCBI chr 5:4,379,999...4,433,243
Ensembl chr 5:4,379,999...4,433,570
JBrowse link
G Ucp1 uncoupling protein 1 involved_in ISO (MGI:5914794|PMID:28763438) RGD PMID:28763438 MGI:5914794 NCBI chr19:24,808,782...24,816,853
Ensembl chr19:24,808,783...24,816,852
JBrowse link
G Vwf von Willebrand factor IEP RGD PMID:12084999 RGD:11079231 NCBI chr 4:158,360,152...158,491,539
Ensembl chr 4:158,360,152...158,491,539
JBrowse link
cellular response to freezing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abraxas2 abraxas 2, BRISC complex subunit acts_upstream_of_or_within ISO MGI:88096 (MGI:5467904|PMID:22974638) RGD PMID:22974638 MGI:5467904 NCBI chr 1:187,647,078...187,672,660
Ensembl chr 1:187,647,067...187,672,655
JBrowse link
positive regulation of transcription from RNA polymerase II promoter in response to cold term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ces1d carboxylesterase 1D acts_upstream_of_or_within ISO (MGI:6306193|PMID:30862682) RGD PMID:30862682 MGI:6306193 NCBI chr19:13,873,490...13,912,035
Ensembl chr19:13,796,623...13,912,035
JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma acts_upstream_of_or_within ISO (MGI:6306193|PMID:30862682) RGD PMID:30862682 MGI:6306193 NCBI chr 4:148,423,102...148,548,471
Ensembl chr 4:148,423,194...148,548,468
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18737
    response to stimulus 10209
      response to stress 4153
        response to cold 76
          cellular response to cold 19
            cellular response to freezing + 1
            positive regulation of transcription from RNA polymerase II promoter in response to cold + 2
            trehalose metabolism in response to cold stress 0
Path 2
Term Annotations click to browse term
  biological_process 18737
    response to stimulus 10209
      response to abiotic stimulus 1565
        response to temperature stimulus 245
          response to cold 76
            cellular response to cold 19
              cellular response to freezing + 1
              positive regulation of transcription from RNA polymerase II promoter in response to cold + 2
              trehalose metabolism in response to cold stress 0
paths to the root