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ONTOLOGY REPORT - ANNOTATIONS

Term:cellular response to cold
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Accession:GO:0070417 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism.
Synonyms:exact_synonym: cellular response to cold stress


show annotations for term's descendants           Sort by:
cellular response to cold term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ces1d carboxylesterase 1D acts_upstream_of_or_within ISO (MGI:6306193|PMID:30862682) RGD PMID:30862682 MGI:6306193 NCBI chr19:13,873,490...13,912,035
Ensembl chr19:13,796,623...13,912,035 		JBrowse link
G Cidea cell death-inducing DFFA-like effector a involved_in ISO (MGI:5914794|PMID:28763438) RGD PMID:28763438 MGI:5914794 NCBI chr18:60,894,917...60,920,485
Ensembl chr18:60,894,874...60,920,481 		JBrowse link
G Cirbp cold inducible RNA binding protein acts_upstream_of_or_within ISO (MGI:87836|PMID:9151692) RGD PMID:9151692 MGI:87836 NCBI chr 7:9,533,857...9,538,899
Ensembl chr 7:9,424,178...9,538,818 		JBrowse link
G Dnajc3 DnaJ heat shock protein family (Hsp40) member C3 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5617428|PMID:25329545)		 UniProt
RGD		 PMID:25329545 GO_REF:0000024 MGI:5617428 NCBI chr15:96,025,605...96,068,585
Ensembl chr15:96,025,624...96,065,181 		JBrowse link
G Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 involved_in ISS
ISO		 GO_REF:0000024
(PMID:25329545)		 UniProt
RGD		 PMID:25329545 GO_REF:0000024 NCBI chr 4:102,805,495...102,866,914
Ensembl chr 4:102,805,510...102,866,911 		JBrowse link
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 involved_in ISO
IEA		 (PMID:25329545)
GO_REF:0000107		 RGD
Ensembl		 PMID:25329545 GO_REF:0000107 NCBI chr 3:105,356,261...105,441,630
Ensembl chr 3:105,356,261...105,441,630 		JBrowse link
G Lipe lipase E, hormone sensitive type acts_upstream_of_or_within ISO (MGI:6306193|PMID:30862682) RGD PMID:30862682 MGI:6306193 NCBI chr 1:80,965,612...80,984,313
Ensembl chr 1:80,965,627...80,984,310 		JBrowse link
G Nfe2l1 NFE2 like bZIP transcription factor 1 acts_upstream_of_or_within ISO MGI:6101514 (MGI:6198859|PMID:29400713) RGD PMID:29400713 MGI:6198859 NCBI chr10:81,796,055...81,812,926
Ensembl chr10:81,800,366...81,832,318 		JBrowse link
G Plin1 perilipin 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:6306193|PMID:30862682)
GO_REF:0000107		 RGD
Ensembl		 PMID:30862682 GO_REF:0000107 MGI:6306193 NCBI chr 1:133,664,294...133,676,854
Ensembl chr 1:133,664,892...133,676,828 		JBrowse link
G Prkaca protein kinase cAMP-activated catalytic subunit alpha acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:6306193|PMID:30862682)
GO_REF:0000107		 RGD
Ensembl		 PMID:30862682 GO_REF:0000107 MGI:6306193 NCBI chr19:24,155,081...24,178,430
Ensembl chr19:24,155,090...24,178,430 		JBrowse link
G Rnf34 ring finger protein 34 involved_in ISO
IEA		 (MGI:5582154|PMID:22064484)
GO_REF:0000107		 RGD
Ensembl		 PMID:22064484 GO_REF:0000107 MGI:5582154 NCBI chr12:33,703,655...33,724,606
Ensembl chr12:33,703,673...33,724,586 		JBrowse link
G Saxo1 stabilizer of axonemal microtubules 1 involved_in ISO (PMID:25673876) RGD PMID:25673876 NCBI chr 5:100,937,134...101,093,308
Ensembl chr 5:100,937,130...101,093,281 		JBrowse link
G Saxol1 stabilizer of axonemal microtubules like 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr  X:27,973,442...27,975,599 JBrowse link
G Scn11a sodium voltage-gated channel alpha subunit 11 involved_in ISO
IEA		 MGI:5608917 (MGI:5707119|PMID:25959819)
GO_REF:0000107		 RGD
Ensembl		 PMID:25959819 GO_REF:0000107 MGI:5707119 NCBI chr 8:119,495,550...119,567,044
Ensembl chr 8:119,496,769...119,567,044 		JBrowse link
G Slc9a1 solute carrier family 9 member A1 IEP RGD PMID:15452191 RGD:1625557 NCBI chr 5:145,576,341...145,629,630
Ensembl chr 5:145,576,334...145,629,624 		JBrowse link
G Trpa1 transient receptor potential cation channel, subfamily A, member 1 IMP RGD PMID:21068322 RGD:10043615 NCBI chr 5:4,379,862...4,434,133
Ensembl chr 5:4,379,999...4,433,570 		JBrowse link
G Ucp1 uncoupling protein 1 involved_in ISO (MGI:5914794|PMID:28763438) RGD PMID:28763438 MGI:5914794 NCBI chr19:24,808,782...24,816,853
Ensembl chr19:24,808,783...24,816,852 		JBrowse link
G Vwf von Willebrand factor IEP RGD PMID:12084999 RGD:11079231 NCBI chr 4:158,360,152...158,491,539
Ensembl chr 4:158,360,152...158,491,539 		JBrowse link
cellular response to freezing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abraxas2 abraxas 2, BRISC complex subunit acts_upstream_of_or_within ISO MGI:88096 (MGI:5467904|PMID:22974638) RGD PMID:22974638 MGI:5467904 NCBI chr 1:187,647,078...187,672,660
Ensembl chr 1:187,647,067...187,672,655 		JBrowse link
positive regulation of transcription from RNA polymerase II promoter in response to cold term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ces1d carboxylesterase 1D acts_upstream_of_or_within ISO (MGI:6306193|PMID:30862682) RGD PMID:30862682 MGI:6306193 NCBI chr19:13,873,490...13,912,035
Ensembl chr19:13,796,623...13,912,035 		JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma acts_upstream_of_or_within ISO (MGI:6306193|PMID:30862682) RGD PMID:30862682 MGI:6306193 NCBI chr 4:148,423,102...148,548,471
Ensembl chr 4:148,423,194...148,548,468 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19574
    response to stimulus 10408
      response to stress 4210
        response to cold 53
          cellular response to cold 20
            cellular response to freezing 1
            positive regulation of transcription from RNA polymerase II promoter in response to cold 2
            trehalose metabolism in response to cold stress 0
Path 2
Term Annotations click to browse term
  biological_process 19574
    response to stimulus 10408
      response to abiotic stimulus 1561
        response to temperature stimulus 191
          response to cold 53
            cellular response to cold 20
              cellular response to freezing 1
              positive regulation of transcription from RNA polymerase II promoter in response to cold 2
              trehalose metabolism in response to cold stress 0
paths to the root