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ONTOLOGY REPORT - ANNOTATIONS


Term:sarcoplasmic reticulum calcium ion transport
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Accession:GO:0070296 term browser browse the term
Definition:The directed movement of calcium ions (Ca2+) into, out of or within the sarcoplasmic reticulum.


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sarcoplasmic reticulum calcium ion transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2a1 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 IDA RGD PMID:19029185 RGD:2313265 NCBI chr 1:197,855,912...197,875,038 JBrowse link
G Atp2a2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 IDA
ISO
MGI:4415164 (MGI:5314827|PMID:22355118) RGD PMID:22355118, PMID:21300842 MGI:5314827, RGD:6904139 NCBI chr12:39,553,903...39,603,326
Ensembl chr12:39,553,903...39,603,326
JBrowse link
G Cacng1 calcium voltage-gated channel auxiliary subunit gamma 1 IEA
ISO
GO_REF:0000107
MGI:2180153 (MGI:3615749|PMID:15504904)
Ensembl
RGD
PMID:15504904 GO_REF:0000107, MGI:3615749 NCBI chr10:95,921,479...95,934,170
Ensembl chr10:95,921,174...95,934,345
JBrowse link
G Ryr1 ryanodine receptor 1 IDA RGD PMID:19230144 RGD:7175256 NCBI chr 1:87,959,596...88,066,252
Ensembl chr 1:87,959,712...88,066,101
JBrowse link
G Ryr2 ryanodine receptor 2 IMP RGD PMID:21807619 RGD:7175254 NCBI chr17:65,533,998...65,955,606
Ensembl chr17:65,535,403...65,955,606
JBrowse link
G Sln sarcolipin ISS
ISO
GO_REF:0000024
(MGI:5295553|PMID:21697544)
UniProt
RGD
PMID:21697544 GO_REF:0000024, MGI:5295553 NCBI chr 8:58,431,407...58,435,654
Ensembl chr 8:58,431,407...58,435,654
JBrowse link
calcium ion import into sarcoplasmic reticulum term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2a1 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 1:197,855,912...197,875,038 JBrowse link
G Atp2a2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 IDA PMID:9851937 BHF-UCL PMID:9851937 RGD:10047146 NCBI chr12:39,553,903...39,603,326
Ensembl chr12:39,553,903...39,603,326
JBrowse link
G Zmpste24 zinc metallopeptidase STE24 ISO MGI:2180033 (MGI:5824440|PMID:27799555) RGD PMID:27799555 MGI:5824440 NCBI chr 5:139,982,404...140,015,541
Ensembl chr 5:139,983,680...140,015,541
JBrowse link
negative regulation of calcium ion import into sarcoplasmic reticulum term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hrc histidine rich calcium binding protein IMP RGD PMID:22952658 RGD:9685495 NCBI chr 1:101,324,788...101,328,391
Ensembl chr 1:101,324,652...101,328,435
JBrowse link
G Mrln myoregulin ISO (MGI:5614883|PMID:25640239) RGD PMID:25640239 MGI:5614883 NCBI chr20:19,703,628...19,720,596 JBrowse link
G Pln phospholamban ISO
ISS
(PMID:8349590)
(MGI:6304509|PMID:30299255)
GO_REF:0000024
RGD
UniProt
PMID:8349590, PMID:30299255 GO_REF:0000024, MGI:6304509 NCBI chr20:34,633,157...34,642,904
Ensembl chr20:34,633,157...34,642,904
JBrowse link
positive regulation of calcium ion import into sarcoplasmic reticulum term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2a1 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 1:197,855,912...197,875,038 JBrowse link
regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank2 ankyrin 2 ISO UniProtKB:Q8C8R3 (PMID:17178715)
(MGI:5427070|PMID:21859974), (MGI:5430893|PMID:17178715)
RGD PMID:17178715, PMID:21859974 MGI:5427070, MGI:5430893 NCBI chr 2:231,224,643...231,522,655
Ensembl chr 2:231,226,949...231,648,122
JBrowse link
G Asph aspartate-beta-hydroxylase ISO (PMID:17400717) RGD PMID:17400717 NCBI chr 5:22,577,680...22,799,333
Ensembl chr 5:22,577,675...22,799,349
JBrowse link
G Cacna1c calcium voltage-gated channel subunit alpha1 C ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 4:150,635,808...151,270,790
Ensembl chr 4:150,641,066...150,829,913
JBrowse link
G Camk2d calcium/calmodulin-dependent protein kinase II delta IC PMID:12676813 BHF-UCL PMID:12676813 RGD:10047271 NCBI chr 2:230,900,907...231,132,207
Ensembl chr 2:230,901,126...231,132,039
JBrowse link
G Casq2 calsequestrin 2 IMP
ISO
IBA
IEA
PMID:17569730
(MGI:1202079|PMID:9525981), (MGI:3689635|PMID:16932808)
PMID:21873635
(PMID:16601229), (PMID:16908766)
GO_REF:0000107
RGD
Ensembl
PMID:9525981, PMID:16601229, PMID:16908766, PMID:16932808, PMID:17569730, PMID:21873635 GO_REF:0000107, MGI:1202079, MGI:3689635, RGD:2314601, RGD:13792537 NCBI chr 2:204,512,361...204,568,643
Ensembl chr 2:204,512,302...204,568,656
JBrowse link
G Dmd dystrophin ISO (MGI:4420848|PMID:20080623) RGD PMID:20080623 MGI:4420848 NCBI chr  X:51,149,358...53,519,271
Ensembl chr  X:51,286,737...53,519,259
JBrowse link
G Fkbp1b FKBP prolyl isomerase 1B IBA
ISO
PMID:21873635
(MGI:3621834|PMID:12837242)
RGD PMID:12837242, PMID:21873635 MGI:3621834, RGD:13792537 NCBI chr 6:29,975,863...29,987,252
Ensembl chr 6:29,977,797...29,987,451
JBrowse link
G Pln phospholamban ISO MGI:2158357 (MGI:82999|PMID:8831698) RGD PMID:8831698 MGI:82999 NCBI chr20:34,633,157...34,642,904
Ensembl chr20:34,633,157...34,642,904
JBrowse link
G Ryr2 ryanodine receptor 2 IEA
ISO
GO_REF:0000107
UniProtKB:Q9Z2I2 (MGI:3621834|PMID:12837242)
Ensembl
RGD
PMID:12837242 GO_REF:0000107, MGI:3621834 NCBI chr17:65,533,998...65,955,606
Ensembl chr17:65,535,403...65,955,606
JBrowse link
G Slc8a1 solute carrier family 8 member A1 IDA PMID:21779914 BHF-UCL PMID:21779914 RGD:8554732 NCBI chr 6:4,244,076...4,564,262
Ensembl chr 6:4,258,991...4,520,604
JBrowse link
G Tmem38a transmembrane protein 38a IEA
ISO
GO_REF:0000107
MGI:1098718 (MGI:3715564|PMID:17611541)
Ensembl
RGD
PMID:17611541 GO_REF:0000107, MGI:3715564 NCBI chr16:18,960,197...18,974,942
Ensembl chr16:18,959,315...18,974,770
JBrowse link
G Tmem38b transmembrane protein 38B ISO MGI:1921416 (MGI:3715564|PMID:17611541) RGD PMID:17611541 MGI:3715564 NCBI chr 5:70,639,156...70,675,055
Ensembl chr 5:70,639,156...70,675,054
JBrowse link
regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap6 A-kinase anchoring protein 6 IC PMID:12709444 BHF-UCL PMID:12709444 RGD:8554839 NCBI chr 6:73,553,111...73,991,992
Ensembl chr 6:73,553,210...73,990,534
JBrowse link
G Calm1 calmodulin 1 ISO (PMID:20226167) RGD PMID:20226167 NCBI chr 6:124,217,241...124,225,292
Ensembl chr 6:124,217,241...124,225,292
JBrowse link
G Calm2 calmodulin 2 ISO (PMID:20226167) RGD PMID:20226167 NCBI chr 6:11,067,675...11,080,078
Ensembl chr15:65,506,874...65,507,968
JBrowse link
G Calm3 calmodulin 3 ISO (PMID:20226167) RGD PMID:20226167 NCBI chr 1:78,844,520...78,851,628
Ensembl chr 1:78,843,080...78,851,719
JBrowse link
G Camk2d calcium/calmodulin-dependent protein kinase II delta IDA PMID:12676813 BHF-UCL PMID:12676813 RGD:10047271 NCBI chr 2:230,900,907...231,132,207
Ensembl chr 2:230,901,126...231,132,039
JBrowse link
G Casq1 calsequestrin 1 ISO MGI:3530841 (MGI:2449410|PMID:12419813), (MGI:3814667|PMID:17627988) RGD PMID:12419813, PMID:17627988 MGI:2449410, MGI:3814667 NCBI chr13:90,592,676...90,602,365
Ensembl chr13:90,592,681...90,602,365
JBrowse link
G Casq2 calsequestrin 2 ISO (PMID:15041652)
(MGI:3689635|PMID:16932808)
RGD PMID:15041652, PMID:16932808 MGI:3689635 NCBI chr 2:204,512,361...204,568,643
Ensembl chr 2:204,512,302...204,568,656
JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 ISO MGI:2176467|MGI:4433295 (MGI:5694290|PMID:26102480) RGD PMID:26102480 MGI:5694290 NCBI chr 5:21,769,087...21,952,036
Ensembl chr 5:21,830,882...21,950,696
JBrowse link
G Clic2 chloride intracellular channel 2 ISO (PMID:15147738), (PMID:15916532) RGD PMID:15147738, PMID:15916532 NCBI chr20:295,338...310,363
Ensembl chr20:295,250...310,380
JBrowse link
G Dhrs7c dehydrogenase/reductase 7C IBA
ISO
PMID:21873635
(MGI:5306721|PMID:21995425)
RGD PMID:21995425, PMID:21873635 MGI:5306721, RGD:13792537 NCBI chr10:54,352,270...54,370,653
Ensembl chr10:54,352,270...54,370,653
JBrowse link
G Dmd dystrophin ISO (MGI:4420848|PMID:20080623), (MGI:5487906|PMID:23263329) RGD PMID:20080623, PMID:23263329 MGI:4420848, MGI:5487906 NCBI chr  X:51,149,358...53,519,271
Ensembl chr  X:51,286,737...53,519,259
JBrowse link
G Fkbp1b FKBP prolyl isomerase 1B ISO (PMID:20431056)
MGI:2182644|MGI:3623214 (MGI:3028710|PMID:14592808), (MGI:3639647|PMID:16672364), (MGI:5007884|PMID:19578067)
RGD PMID:14592808, PMID:16672364, PMID:19578067, PMID:20431056 MGI:3028710, MGI:3639647, MGI:5007884 NCBI chr 6:29,975,863...29,987,252
Ensembl chr 6:29,977,797...29,987,451
JBrowse link
G Gstm2 glutathione S-transferase mu 2 ISO
IEA
(PMID:17023043)
GO_REF:0000107
RGD
Ensembl
PMID:17023043 GO_REF:0000107 NCBI chr 2:210,778,041...210,782,807
Ensembl chr 2:210,720,704...210,782,856
JBrowse link
G Gstm7 glutathione S-transferase, mu 7 IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 2:210,720,719...210,726,179
Ensembl chr 2:210,720,704...210,782,856
JBrowse link
G Gsto1 glutathione S-transferase omega 1 ISO
IEA
(PMID:11035031)
GO_REF:0000107
RGD
Ensembl
PMID:11035031 GO_REF:0000107 NCBI chr 1:267,607,437...267,617,387
Ensembl chr 1:267,607,418...267,617,387
JBrowse link
G Hrc histidine rich calcium binding protein ISO UniProtKB:B9EIW1 (PMID:24125847) RGD PMID:24125847 NCBI chr 1:101,324,788...101,328,391
Ensembl chr 1:101,324,652...101,328,435
JBrowse link
G Mettl21c methyltransferase like 21C ISO (MGI:5781029|PMID:24677265) RGD PMID:24677265 MGI:5781029 NCBI chr 9:50,750,971...50,762,082
Ensembl chr 9:50,750,971...50,762,082
JBrowse link
G Nol3 nucleolar protein 3 IMP PMID:23382383 UniProt PMID:23382383 RGD:10047354 NCBI chr19:37,232,567...37,236,668
Ensembl chr19:37,235,001...37,236,649
JBrowse link
G Pde4d phosphodiesterase 4D IEA
ISO
GO_REF:0000107
(MGI:3690823|PMID:16213210)
Ensembl
RGD
PMID:16213210 GO_REF:0000107, MGI:3690823 NCBI chr 2:40,219,999...41,468,551
Ensembl chr 2:40,554,146...41,464,264
JBrowse link
G Pln phospholamban ISO MGI:2158357 (MGI:3655341|PMID:9118481) RGD PMID:9118481 MGI:3655341 NCBI chr20:34,633,157...34,642,904
Ensembl chr20:34,633,157...34,642,904
JBrowse link
G Trdn triadin IMP
IBA
ISO
PMID:21873635
(PMID:15041652)
RGD PMID:15041652, PMID:17569730, PMID:21873635 RGD:2314601, RGD:13792537 NCBI chr 1:25,403,390...25,787,664
Ensembl chr 1:25,403,390...25,839,345
JBrowse link
regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casq1 calsequestrin 1 ISS
ISO
IBA
GO_REF:0000024
MGI:3530841 (MGI:3814667|PMID:17627988), (MGI:5306707|PMID:22049211)
PMID:21873635
UniProt
RGD
PMID:17627988, PMID:22049211, PMID:21873635 GO_REF:0000024, MGI:3814667, MGI:5306707, RGD:13792537 NCBI chr13:90,592,676...90,602,365
Ensembl chr13:90,592,681...90,602,365
JBrowse link
G Dmd dystrophin ISO (MGI:3837615|PMID:19198614) RGD PMID:19198614 MGI:3837615 NCBI chr  X:51,149,358...53,519,271
Ensembl chr  X:51,286,737...53,519,259
JBrowse link
release of sequestered calcium ion into cytosol by sarcoplasmic reticulum term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccl3 C-C motif chemokine ligand 3 ISO
ISS
(PMID:19523456)
GO_REF:0000024
RGD
UniProt
PMID:19523456 GO_REF:0000024 NCBI chr10:70,869,516...70,871,066
Ensembl chr10:70,869,513...70,871,066
JBrowse link
G Ccr5 C-C motif chemokine receptor 5 IEA
ISO
GO_REF:0000107
(PMID:19523456)
Ensembl
RGD
PMID:19523456 GO_REF:0000107 NCBI chr 8:133,192,398...133,215,599
Ensembl chr 8:133,197,032...133,215,614
JBrowse link
G Nol3 nucleolar protein 3 ISO
IEA
(PMID:15509781)
GO_REF:0000107
RGD
Ensembl
PMID:15509781 GO_REF:0000107 NCBI chr19:37,232,567...37,236,668
Ensembl chr19:37,235,001...37,236,649
JBrowse link
G Ryr1 ryanodine receptor 1 IEA
ISO
ISS
IDA
GO_REF:0000107
(MGI:3764002|PMID:18003898)
GO_REF:0000024
PMID:11316255
Ensembl
RGD
UniProt
PMID:18003898, PMID:11316255 GO_REF:0000024, GO_REF:0000107, MGI:3764002, RGD:12903237 NCBI chr 1:87,959,596...88,066,252
Ensembl chr 1:87,959,712...88,066,101
JBrowse link
G Ryr2 ryanodine receptor 2 ISO
IEA
(PMID:12919952)
(MGI:2182484|PMID:12089338), (MGI:4442115|PMID:20226167)
(PMID:15041652)
GO_REF:0000107
RGD
Ensembl
PMID:12089338, PMID:12919952, PMID:15041652, PMID:20226167 GO_REF:0000107, MGI:2182484, MGI:4442115 NCBI chr17:65,533,998...65,955,606
Ensembl chr17:65,535,403...65,955,606
JBrowse link
G Tmem38a transmembrane protein 38a IEA
ISO
GO_REF:0000107
MGI:1098718 (MGI:3715564|PMID:17611541)
Ensembl
RGD
PMID:17611541 GO_REF:0000107, MGI:3715564 NCBI chr16:18,960,197...18,974,942
Ensembl chr16:18,959,315...18,974,770
JBrowse link
G Tmem38b transmembrane protein 38B ISO MGI:1921416 (MGI:3715564|PMID:17611541) RGD PMID:17611541 MGI:3715564 NCBI chr 5:70,639,156...70,675,055
Ensembl chr 5:70,639,156...70,675,054
JBrowse link
G Trdn triadin IEA
ISO
GO_REF:0000107
MGI:3769415 (MGI:3849347|PMID:19383796)
Ensembl
RGD
PMID:19383796 GO_REF:0000107, MGI:3849347 NCBI chr 1:25,403,390...25,787,664
Ensembl chr 1:25,403,390...25,839,345
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20020
    localization 6478
      establishment of localization 4886
        transport 4734
          ion transport 3500
            cation transport 1280
              divalent inorganic cation transport 507
                divalent metal ion transport 501
                  calcium ion transport 455
                    sarcoplasmic reticulum calcium ion transport 37
                      calcium ion import into sarcoplasmic reticulum + 6
                      release of sequestered calcium ion into cytosol by sarcoplasmic reticulum + 31
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.