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ONTOLOGY REPORT - ANNOTATIONS


Term:vitamin B6 binding
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Accession:GO:0070279 term browser browse the term
Definition:Binding to a vitamin B6 compound: pyridoxal, pyridoxamine, pyridoxine, or the active form, pyridoxal phosphate.


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vitamin B6 binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Scly selenocysteine lyase enables ISO PMID:20164179 CAFA PMID:20164179 RGD:12793035 NCBI chrNW_004936525:381,188...407,544
Ensembl chrNW_004936525:381,168...407,599
JBrowse link
pyridoxal binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdxk pyridoxal kinase ISO RGD PMID:6255956 RGD:2303024 NCBI chrNW_004936500:510,977...539,166
Ensembl chrNW_004936500:509,510...529,455
JBrowse link
pyridoxal phosphate binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aadat aminoadipate aminotransferase enables IEA InterPro GO_REF:0000002 NCBI chrNW_004936516:2,030,032...2,052,025
Ensembl chrNW_004936516:2,029,715...2,052,041
JBrowse link
G Abat 4-aminobutyrate aminotransferase enables IEA Ensembl
TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936530:7,543,743...7,621,392
Ensembl chrNW_004936530:7,543,682...7,622,667
JBrowse link
G Accs 1-aminocyclopropane-1-carboxylate synthase homolog (inactive) enables IEA InterPro GO_REF:0000002 NCBI chrNW_004936562:4,544,540...4,559,084 JBrowse link
G Accsl 1-aminocyclopropane-1-carboxylate synthase homolog (inactive) like enables IEA InterPro GO_REF:0000002 NCBI chrNW_004936562:4,616,143...4,708,264
Ensembl chrNW_004936562:4,616,507...4,627,568
JBrowse link
G Agxt alanine--glyoxylate and serine--pyruvate aminotransferase enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936745:856,915...867,477
Ensembl chrNW_004936745:857,102...867,477
JBrowse link
G Agxt2 alanine--glyoxylate aminotransferase 2 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004936518:6,508,928...6,544,324
Ensembl chrNW_004936518:6,508,928...6,544,146
JBrowse link
G Alas1 5'-aminolevulinate synthase 1 enables IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004936529:3,518,337...3,531,842
Ensembl chrNW_004936529:3,518,322...3,531,845
JBrowse link
G Alas2 5'-aminolevulinate synthase 2 enables IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004936751:1,818,255...1,841,028
Ensembl chrNW_004936751:1,814,446...1,841,531
JBrowse link
G Cbs cystathionine beta-synthase enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936500:976,043...1,003,559
Ensembl chrNW_004936500:987,128...1,003,388
JBrowse link
G Cisd1 CDGSH iron sulfur domain 1 enables ISO (PMID:36194135) UniProt PMID:36194135 NCBI chrNW_004936614:4,706,463...4,723,756 JBrowse link
G Csad cysteine sulfinic acid decarboxylase enables IEA InterPro GO_REF:0000002 NCBI chrNW_004936512:10,447,457...10,475,231
Ensembl chrNW_004936512:10,447,461...10,474,985
JBrowse link
G Cth cystathionine gamma-lyase enables IEA InterPro
TreeGrafter
Ensembl
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936591:1,619,446...1,643,667
Ensembl chrNW_004936591:1,619,446...1,643,665
JBrowse link
G Ddc dopa decarboxylase enables ISO
IEA
RGD
InterPro
PMID:8422386 GO_REF:0000002 RGD:4139896 NCBI chrNW_004936686:1,322,153...1,405,434
Ensembl chrNW_004936686:1,301,207...1,405,384
JBrowse link
G Etnppl ethanolamine-phosphate phospho-lyase enables IEA InterPro GO_REF:0000002 NCBI chrNW_004936563:56,216...74,591
Ensembl chrNW_004936563:56,776...74,403
JBrowse link
G Gad1 glutamate decarboxylase 1 enables ISO
IEA
RGD
InterPro
PMID:1880546 GO_REF:0000002 RGD:6480263 NCBI chrNW_004936509:1,160,559...1,201,037
Ensembl chrNW_004936509:1,161,094...1,201,576
JBrowse link
G Gad2 glutamate decarboxylase 2 enables ISO
IEA
RGD
InterPro
PMID:1880546 GO_REF:0000002 RGD:6480263 NCBI chrNW_004936484:1,737,806...1,810,378
Ensembl chrNW_004936484:1,737,520...1,810,398
JBrowse link
G Gadl1 glutamate decarboxylase like 1 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004936473:21,430,668...21,563,241
Ensembl chrNW_004936473:21,431,071...21,563,226
JBrowse link
G Gcat glycine C-acetyltransferase enables IEA InterPro GO_REF:0000002 NCBI chrNW_004936492:3,307,015...3,313,441
Ensembl chrNW_004936492:3,304,031...3,313,475
JBrowse link
G Gldc glycine decarboxylase enables ISO
IEA
RGD
TreeGrafter
PMID:6778858 GO_REF:0000118 RGD:1642728 NCBI chrNW_004936539:1,008,340...1,095,044
Ensembl chrNW_004936539:1,007,820...1,095,054
JBrowse link
G Got1 glutamic-oxaloacetic transaminase 1 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004936636:617,376...640,424
Ensembl chrNW_004936636:617,356...640,932
JBrowse link
G Got1l1 glutamic-oxaloacetic transaminase 1 like 1 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004936710:1,388,743...1,393,791
Ensembl chrNW_004936710:1,388,743...1,393,758
JBrowse link
G Gpt glutamic--pyruvic transaminase enables IEA InterPro GO_REF:0000002 NCBI chrNW_004936470:7,765,810...7,770,837
Ensembl chrNW_004936470:7,765,703...7,768,465
JBrowse link
G Gpt2 glutamic--pyruvic transaminase 2 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004936475:262,558...299,766
Ensembl chrNW_004936475:262,920...297,459
JBrowse link
G Hdc histidine decarboxylase enables ISO
IEA
RGD
InterPro
PMID:5898 PMID:4449071 PMID:7075603 PMID:9525922 PMID:12204113 More... GO_REF:0000002 RGD:2303726 RGD:2303727 RGD:2303728 RGD:2303733 RGD:2303734 RGD:2303735 NCBI chrNW_004936471:12,303,802...12,324,613
Ensembl chrNW_004936471:12,304,130...12,324,570
JBrowse link
G Kyat1 kynurenine aminotransferase 1 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004936487:16,299,054...16,344,587
Ensembl chrNW_004936487:16,297,991...16,344,745
JBrowse link
G Kyat3 kynurenine aminotransferase 3 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004936732:77,427...125,816 JBrowse link
G Kynu kynureninase enables ISO
IEA
RGD
UniProt
InterPro
PMID:7451426 GO_REF:0000002 GO_REF:0000104 RGD:2290547 NCBI chrNW_004936469:33,632,885...33,805,158
Ensembl chrNW_004936469:33,632,892...33,734,433
JBrowse link
G LOC101962681 aspartate aminotransferase, mitochondrial-like enables IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936527:626,017...628,228 JBrowse link
G LOC101967158 serine palmitoyltransferase 2 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004936488:6,313,189...6,404,425
Ensembl chrNW_004936488:6,289,833...6,296,849
Ensembl chrNW_004936488:6,289,833...6,296,849
JBrowse link
G LOC101977971 aspartate aminotransferase, mitochondrial-like enables IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936739:419,221...420,552 JBrowse link
G Mocos molybdenum cofactor sulfurase enables IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004936517:9,059,042...9,105,304
Ensembl chrNW_004936517:9,055,805...9,105,357
JBrowse link
G Mtarc1 mitochondrial amidoxime reducing component 1 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004936650:1,477,138...1,504,501
Ensembl chrNW_004936650:1,478,037...1,504,611
JBrowse link
G Mtarc2 mitochondrial amidoxime reducing component 2 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004936650:1,506,471...1,543,532
Ensembl chrNW_004936650:1,506,329...1,543,712
JBrowse link
G Oat ornithine aminotransferase enables IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936486:12,723,363...12,743,367
Ensembl chrNW_004936486:12,723,305...12,743,422
JBrowse link
G Pdxdc1 pyridoxal dependent decarboxylase domain containing 1 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004936501:2,946,402...3,001,712
Ensembl chrNW_004936501:2,946,669...3,001,553
JBrowse link
G Pdxk pyridoxal kinase enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936500:510,977...539,166
Ensembl chrNW_004936500:509,510...529,455
JBrowse link
G Phykpl 5-phosphohydroxy-L-lysine phospho-lyase enables IEA InterPro GO_REF:0000002 NCBI chrNW_004936647:456,633...480,711
Ensembl chrNW_004936647:458,052...478,747
JBrowse link
G Plpbp pyridoxal phosphate binding protein enables IEA UniProt
TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chrNW_004936710:1,216,142...1,236,559
Ensembl chrNW_004936710:1,216,104...1,238,153
JBrowse link
G Pnpo pyridoxamine 5'-phosphate oxidase enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:13,374,925...13,382,037
Ensembl chrNW_004936490:13,374,737...13,382,071
JBrowse link
G Psat1 phosphoserine aminotransferase 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936632:4,392,165...4,422,670
Ensembl chrNW_004936632:4,391,459...4,423,264
JBrowse link
G Pygb glycogen phosphorylase B enables IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936620:533,574...575,893
Ensembl chrNW_004936620:532,634...575,916
JBrowse link
G Pygl glycogen phosphorylase L enables IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936495:14,692,688...14,728,663
Ensembl chrNW_004936495:14,692,332...14,730,231
JBrowse link
G Pygm glycogen phosphorylase, muscle associated enables ISO
IEA
RGD
TreeGrafter
InterPro
PMID:11692172 GO_REF:0000002 GO_REF:0000118 RGD:1599897 NCBI chrNW_004936599:4,551,164...4,564,109
Ensembl chrNW_004936599:4,551,032...4,564,154
JBrowse link
G Sds serine dehydratase enables IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936668:3,208,810...3,213,465
Ensembl chrNW_004936668:3,206,458...3,215,617
JBrowse link
G Sgpl1 sphingosine-1-phosphate lyase 1 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004936521:7,850,370...7,899,998
Ensembl chrNW_004936521:7,848,972...7,900,041
JBrowse link
G Shmt1 serine hydroxymethyltransferase 1 enables ISO
IEA
RGD
TreeGrafter
InterPro
Ensembl
PMID:3110140 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 RGD:2300383 NCBI chrNW_004936741:1,849,239...1,877,724
Ensembl chrNW_004936741:1,849,609...1,877,727
JBrowse link
G Shmt2 serine hydroxymethyltransferase 2 enables ISO
IEA
RGD
TreeGrafter
Ensembl
InterPro
PMID:3110140 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 RGD:2300383 NCBI chrNW_004936646:1,422,844...1,427,929
Ensembl chrNW_004936646:1,422,817...1,429,037
JBrowse link
G Sptlc1 serine palmitoyltransferase long chain base subunit 1 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004936796:886,946...948,254
Ensembl chrNW_004936796:886,922...948,254
JBrowse link
G Sptlc3 serine palmitoyltransferase long chain base subunit 3 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004936485:6,647,930...6,784,792
Ensembl chrNW_004936485:6,644,188...6,784,828
JBrowse link
G Srr serine racemase enables ISO
IEA
RGD
TreeGrafter
InterPro
PMID:9892700 GO_REF:0000002 GO_REF:0000118 RGD:2302218 NCBI chrNW_004936538:8,362,033...8,383,820 JBrowse link
G Tat tyrosine aminotransferase enables IEA InterPro GO_REF:0000002 NCBI chrNW_004936475:22,190,282...22,199,398
Ensembl chrNW_004936475:22,189,728...22,199,672
JBrowse link
G Thnsl2 threonine synthase like 2 enables IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936712:684,711...699,714
Ensembl chrNW_004936712:681,133...699,792
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 17084
    binding 15355
      organic cyclic compound binding 4945
        vitamin B6 binding 53
          pyridoxal binding 1
          pyridoxal phosphate binding 52
          pyridoxamine binding 0
          pyridoxine binding 0
Path 2
Term Annotations click to browse term
  molecular_function 17084
    binding 15355
      small molecule binding 5005
        vitamin binding 136
          vitamin B6 binding 53
            pyridoxal binding 1
            pyridoxal phosphate binding 52
            pyridoxamine binding 0
            pyridoxine binding 0
paths to the root