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ONTOLOGY REPORT - ANNOTATIONS

Term:protein-lipid complex assembly
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Accession:GO:0065005 term browser browse the term
Definition:The aggregation, arrangement and bonding together of proteins and lipids to form a protein-lipid complex.

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protein-lipid complex assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa4 apolipoprotein A4 ISO
IEA		 (PMID:16159879)
GO_REF:0000107		 RGD
Ensembl		 PMID:16159879 GO_REF:0000107 NCBI chr 8:50,536,983...50,539,371
Ensembl chr 8:50,537,009...50,539,376 		JBrowse link
chylomicron assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lpcat3 lysophosphatidylcholine acyltransferase 3 ISS
ISO		 GO_REF:0000024
(MGI:5780634|PMID:26833026)		 UniProt
RGD		 PMID:26833026 GO_REF:0000024 MGI:5780634 NCBI chr 4:157,181,722...157,222,997
Ensembl chr 4:157,181,795...157,222,996 		JBrowse link
G Plagl2 PLAG1 like zinc finger 2 ISO MGI:3771822 (MGI:3771409|PMID:17983586) RGD PMID:17983586 MGI:3771409 NCBI chr 3:148,709,564...148,722,777
Ensembl chr 3:148,709,531...148,722,742 		JBrowse link
high-density lipoprotein particle assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 ISO (PMID:10431236), (PMID:14754908), (PMID:17305370) RGD PMID:10431236 PMID:14754908 PMID:17305370 NCBI chr 5:69,857,717...69,983,042
Ensembl chr 5:69,857,771...69,983,015 		JBrowse link
G Abca7 ATP binding cassette subfamily A member 7 ISO
IEA
ISS		 (PMID:14570867)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
Alzheimers_University_of_Toronto		 PMID:14570867 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:12,742,433...12,762,423
Ensembl chr 7:12,742,433...12,762,341 		JBrowse link
G Apoa1 apolipoprotein A1 ISO
IBA		 (PMID:190223)
PMID:21873635		 RGD PMID:190223, PMID:21873635 RGD:13792537 NCBI chr 8:50,525,091...50,526,875
Ensembl chr 8:50,525,091...50,526,875 		JBrowse link
G Apoa2 apolipoprotein A2 ISO
IBA		 (PMID:218942)
PMID:21873635		 RGD PMID:218942, PMID:21873635 RGD:13792537 NCBI chr13:89,596,872...89,598,805
Ensembl chr13:89,597,138...89,598,802 		JBrowse link
G Apoa4 apolipoprotein A4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:50,536,983...50,539,371
Ensembl chr 8:50,537,009...50,539,376 		JBrowse link
G Apoa5 apolipoprotein A5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:50,559,079...50,561,720
Ensembl chr 8:50,559,126...50,561,736 		JBrowse link
G Apoe apolipoprotein E IEA
ISO
ISS		 GO_REF:0000107
(PMID:14754908), (PMID:17305370)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:14754908 PMID:17305370 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:80,612,894...80,616,820
Ensembl chr 1:80,612,895...80,617,057 		JBrowse link
G Apom apolipoprotein M ISO
IBA		 (MGI:3575626|PMID:15793583)
PMID:21873635		 RGD PMID:15793583, PMID:21873635 MGI:3575626, RGD:13792537 NCBI chr20:5,120,473...5,123,073
Ensembl chr20:5,120,474...5,123,073 		JBrowse link
lipid tube assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bin1 bridging integrator 1 ISO
ISS
IEA		 (PMID:19004523)
GO_REF:0000024
GO_REF:0000107		 RGD
Alzheimers_University_of_Toronto
Ensembl		 PMID:19004523 GO_REF:0000024 GO_REF:0000107 NCBI chr18:25,163,575...25,222,139
Ensembl chr18:25,163,561...25,222,135 		JBrowse link
G Sh3gl2 SH3 domain containing GRB2 like 2, endophilin A1 IDA RGD PMID:20484046 RGD:13464358 NCBI chr 5:103,479,767...103,654,507
Ensembl chr 5:103,479,767...103,654,247 		JBrowse link
G Snx9 sorting nexin 9 ISO (PMID:17948057) RGD PMID:17948057 NCBI chr 1:46,780,142...46,826,250
Ensembl chr 1:46,779,860...46,825,830 		JBrowse link
lipid tube assembly involved in organelle fusion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pcdhga3 protocadherin gamma subfamily A, 3 ISO (MGI:5317350|PMID:21917590) RGD PMID:21917590 MGI:5317350 NCBI chr18:30,820,151...30,971,113
Ensembl chr18:30,820,321...30,822,735 		JBrowse link
plasma lipoprotein particle assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mttp microsomal triglyceride transfer protein ISO
ISS		 (PMID:16478722), (PMID:23475612), (PMID:26224785), (PMID:8876250)
GO_REF:0000024		 RGD
UniProt		 PMID:8876250 PMID:16478722 PMID:23475612 PMID:26224785 GO_REF:0000024 NCBI chr 2:243,366,181...243,407,608
Ensembl chr 2:243,366,181...243,407,608 		JBrowse link
positive regulation of high-density lipoprotein particle assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 ISO (MGI:5427333|PMID:22179027) RGD PMID:22179027 MGI:5427333 NCBI chr 5:69,857,717...69,983,042
Ensembl chr 5:69,857,771...69,983,015 		JBrowse link
G Nr1h2 nuclear receptor subfamily 1, group H, member 2 ISO (MGI:3720271|PMID:17657314), (MGI:3794353|PMID:16825483) RGD PMID:16825483 PMID:17657314 MGI:3720271 MGI:3794353 NCBI chr 1:100,554,577...100,559,896
Ensembl chr 1:100,554,544...100,559,942 		JBrowse link
regulation of high-density lipoprotein particle assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lcat lecithin cholesterol acyltransferase ISO (MGI:3848791|PMID:19065001) RGD PMID:19065001 MGI:3848791 NCBI chr19:37,913,333...37,916,799
Ensembl chr19:37,913,336...37,916,813 		JBrowse link
very-low-density lipoprotein particle assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acsl3 acyl-CoA synthetase long-chain family member 3 ISO (PMID:18003621) RGD PMID:18003621 NCBI chr 9:84,569,601...84,593,565
Ensembl chr 9:84,569,597...84,593,565 		JBrowse link
G Arf1 ADP-ribosylation factor 1 IMP RGD PMID:15618550 RGD:9684856 NCBI chr10:45,562,700...45,579,214
Ensembl chr10:45,563,547...45,579,029 		JBrowse link
G Ces1d carboxylesterase 1D IEA
ISO		 GO_REF:0000107
MGI:4440967 (MGI:4440377|PMID:20197051)		 Ensembl
RGD		 PMID:20197051 GO_REF:0000107 MGI:4440377 NCBI chr19:15,195,514...15,239,827
Ensembl chr19:15,033,108...15,239,821 		JBrowse link
G Dgat1 diacylglycerol O-acyltransferase 1 ISO
IEA		 (PMID:15308631)
GO_REF:0000107		 RGD
Ensembl		 PMID:15308631 GO_REF:0000107 NCBI chr 7:117,566,363...117,576,735
Ensembl chr 7:117,566,368...117,576,737 		JBrowse link
G Fech ferrochelatase ISO MGI:1858114 (MGI:1930023|PMID:11160364) RGD PMID:11160364 MGI:1930023 NCBI chr18:59,941,992...59,975,192
Ensembl chr18:59,941,992...59,975,192 		JBrowse link
G Lpcat3 lysophosphatidylcholine acyltransferase 3 ISS
ISO		 GO_REF:0000024
(MGI:5636535|PMID:25806685)		 UniProt
RGD		 PMID:25806685 GO_REF:0000024 MGI:5636535 NCBI chr 4:157,181,722...157,222,997
Ensembl chr 4:157,181,795...157,222,996 		JBrowse link
G Mfsd2a major facilitator superfamily domain containing 2A ISO (MGI:5474727|PMID:23209793) RGD PMID:23209793 MGI:5474727 NCBI chr 5:140,642,865...140,657,759
Ensembl chr 5:140,642,885...140,657,745 		JBrowse link
G Soat1 sterol O-acyltransferase 1 ISO
IEA		 (PMID:15308631)
GO_REF:0000107		 RGD
Ensembl		 PMID:15308631 GO_REF:0000107 NCBI chr13:74,035,258...74,077,759
Ensembl chr13:74,035,080...74,077,783 		JBrowse link
G Soat2 sterol O-acyltransferase 2 ISO
IEA		 (PMID:15308631)
GO_REF:0000107		 RGD
Ensembl		 PMID:15308631 GO_REF:0000107 NCBI chr 7:143,754,892...143,767,989
Ensembl chr 7:143,754,892...143,767,989 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20044
    cellular process 18858
      cellular component organization or biogenesis 6787
        cellular component organization 6534
          cellular component assembly 2986
            protein-containing complex assembly 1603
              protein-lipid complex assembly 25
                lipid antigen assembly with MHC class Ib protein complex 0
                lipid tube assembly + 4
                plasma lipoprotein particle assembly + 21
paths to the root