ONTOLOGY REPORT - ANNOTATIONS |
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Term: | protein-DNA complex assembly |
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Accession: | GO:0065004
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browse the term
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Definition: | The aggregation, arrangement and bonding together of proteins and DNA molecules to form a protein-DNA complex. |
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Ep300 |
E1A binding protein p300 |
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IDA |
p53, CBP, p21/WAF1 promoter |
RGD |
PMID:9215639 |
RGD:2312285 |
NCBI chr 7:113,108,476...113,178,529
Ensembl chr 7:113,106,247...113,136,088 Ensembl chr 7:113,106,247...113,136,088
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Hey2 |
hes-related family bHLH transcription factor with YRPW motif 2 |
acts_upstream_of_or_within |
ISO |
(MGI:1354027|PMID:10692439), (MGI:3624193|PMID:16603706) |
RGD |
PMID:10692439 PMID:16603706 |
MGI:1354027 MGI:3624193 |
NCBI chr 1:26,822,131...26,832,218
Ensembl chr 1:26,822,131...26,832,218
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Hnf1b |
HNF1 homeobox B |
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IMP |
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RGD |
PMID:9545279 |
RGD:2312721 |
NCBI chr10:68,735,894...68,789,888
Ensembl chr10:68,735,894...68,789,888
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Pias1 |
protein inhibitor of activated STAT, 1 |
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IMP |
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RGD |
PMID:16135793 |
RGD:2303115 |
NCBI chr 8:63,338,150...63,451,670
Ensembl chr 8:63,338,150...63,438,905
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Tcf4 |
transcription factor 4 |
involved_in |
ISO |
(MGI:85411|PMID:8978694) |
RGD |
PMID:8978694 |
MGI:85411 |
NCBI chr18:62,941,739...63,288,126
Ensembl chr18:62,943,782...63,284,425
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Cenpa |
centromere protein A |
involved_in |
ISO |
(PMID:11682612) |
RGD |
PMID:11682612 |
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NCBI chr 6:25,700,142...25,711,767
Ensembl chr 6:25,700,142...25,711,675
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Cenpi |
centromere protein I |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr X:97,515,919...97,567,671
Ensembl chr X:97,515,972...97,567,657
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Cenpn |
centromere protein N |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr19:44,971,265...44,994,019
Ensembl chr19:44,968,308...44,994,012
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Cenpp |
centromere protein P |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr17:15,013,869...15,189,312
Ensembl chr17:15,014,058...15,189,304
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Hjurp |
Holliday junction recognition protein |
involved_in |
ISO IBA |
(PMID:19410544), (PMID:19410545) PMID:21873635 |
RGD |
PMID:19410544 PMID:19410545 PMID:21873635 |
RGD:13792537 |
NCBI chr 9:88,853,379...88,867,730
Ensembl chr 9:88,853,386...88,867,728
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Itgb3bp |
integrin subunit beta 3 binding protein |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr 5:114,460,217...114,525,538
Ensembl chr 5:114,460,221...114,525,704
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Mis18a |
MIS18 kinetochore protein A |
acts_upstream_of_or_within involved_in |
ISO IBA |
MGI:5441069 (MGI:5438906|PMID:22516971) PMID:21873635 |
RGD |
PMID:22516971 PMID:21873635 |
MGI:5438906, RGD:13792537 |
NCBI chr11:29,968,030...29,981,058
Ensembl chr11:29,967,701...29,981,062
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Nasp |
nuclear autoantigenic sperm protein |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 5:130,057,363...130,083,003
Ensembl chr 5:130,057,363...130,082,928
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Oip5 |
Opa interacting protein 5 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 3:106,593,746...106,603,281
Ensembl chr 3:106,593,760...106,603,250
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Cenpi |
centromere protein I |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr X:97,515,919...97,567,671
Ensembl chr X:97,515,972...97,567,657
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Cenpo |
centromere protein O |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr 6:27,203,642...27,218,394
Ensembl chr 6:27,188,537...27,218,314
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Cenpv |
centromere protein V |
involved_in |
ISO |
(PMID:18772885) |
RGD |
PMID:18772885 |
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NCBI chr10:47,214,479...47,228,552
Ensembl chr10:47,214,490...47,228,761
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Dmc1 |
DNA meiotic recombinase 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 7:111,124,888...111,167,465
Ensembl chr 7:111,124,888...111,167,952
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Rad51 |
RAD51 recombinase |
involved_in |
ISO IBA |
(PMID:26681308) PMID:21873635 |
RGD |
PMID:26681308 PMID:21873635 |
RGD:13792537 |
NCBI chr 3:106,099,753...106,125,038
Ensembl chr 3:106,100,381...106,125,035
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Rad52 |
RAD52 homolog, DNA repair protein |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr 4:153,106,062...153,128,598
Ensembl chr 4:153,106,062...153,128,207
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Cdt1 |
chromatin licensing and DNA replication factor 1 |
involved_in |
IBA ISO |
PMID:21873635 (PMID:11125146) |
RGD |
PMID:11125146 PMID:21873635 |
RGD:13792537 |
NCBI chr19:50,620,713...50,625,659
Ensembl chr19:50,620,713...50,625,659
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Gmnn |
geminin, DNA replication inhibitor |
involved_in |
ISO |
(PMID:11125146) |
RGD |
PMID:11125146 |
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NCBI chr17:40,301,771...40,310,054
Ensembl chr17:40,301,808...40,310,054
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Cenpa |
centromere protein A |
involved_in |
ISO |
(PMID:11682612) |
RGD |
PMID:11682612 |
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NCBI chr 6:25,700,142...25,711,767
Ensembl chr 6:25,700,142...25,711,675
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Cenpc |
centromere protein C |
involved_in |
ISO IBA |
(PMID:21529714) PMID:21873635 |
RGD |
PMID:21529714 PMID:21873635 |
RGD:13792537 |
NCBI chr14:21,988,067...22,046,732
Ensembl chr14:21,988,144...22,055,476
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Cenpe |
centromere protein E |
involved_in |
ISO |
(PMID:9763420) |
RGD |
PMID:9763420 |
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NCBI chr 2:223,637,035...223,695,692
Ensembl chr 2:223,636,998...223,695,669
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Cenph |
centromere protein H |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr 2:31,894,253...31,910,182
Ensembl chr 2:31,894,667...31,910,154
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Cenpk |
centromere protein K |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr 2:35,360,132...35,421,372
Ensembl chr 2:35,360,132...35,385,706
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Cenpt |
centromere protein T |
involved_in |
ISO IEA ISS |
(PMID:21529714) GO_REF:0000002 GO_REF:0000024 |
RGD InterPro UniProt |
PMID:21529714 |
GO_REF:0000002 GO_REF:0000024 |
NCBI chr19:33,734,684...33,741,159
Ensembl chr19:33,734,685...33,741,142
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Cenpw |
centromere protein W |
involved_in |
ISS IBA ISO |
GO_REF:0000024 PMID:21873635 (PMID:21695110) |
UniProt RGD |
PMID:21695110 PMID:21873635 |
GO_REF:0000024, RGD:13792537 |
NCBI chr 1:27,525,324...27,530,464
Ensembl chr 1:27,525,324...27,530,464
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Dlgap5 |
DLG associated protein 5 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr15:20,633,964...20,664,569
Ensembl chr15:20,633,966...20,664,518
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ENSRNOG00000068966 |
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involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
Ensembl chr10:13,018,919...13,019,963
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LOC681382 |
hypothetical protein LOC681382 |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr X:53,848,491...53,848,803
Ensembl chr X:53,848,510...53,848,770
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Mis12 |
MIS12 kinetochore complex component |
involved_in |
IBA ISO |
PMID:21873635 (PMID:16585270) |
RGD |
PMID:16585270 PMID:21873635 |
RGD:13792537 |
NCBI chr10:55,739,590...55,747,915
Ensembl chr10:55,739,564...55,751,068
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Pogz |
pogo transposable element derived with ZNF domain |
involved_in |
ISO |
(PMID:20562864) |
RGD |
PMID:20562864 |
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NCBI chr 2:182,394,269...182,440,711
Ensembl chr 2:182,380,768...182,440,707
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Mcmdc2 |
minichromosome maintenance domain containing 2 |
acts_upstream_of_or_within |
ISO |
MGI:2178050|MGI:5511194 (MGI:5805564|PMID:27760146) |
RGD |
PMID:27760146 |
MGI:5805564 |
NCBI chr 5:9,291,967...9,337,526
Ensembl chr 5:9,298,101...9,338,300
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Rad51c |
RAD51 paralog C |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr10:72,205,032...72,231,643
Ensembl chr10:72,205,032...72,231,248
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Mcmdc2 |
minichromosome maintenance domain containing 2 |
acts_upstream_of_or_within |
ISO |
MGI:2178050|MGI:5511194 (MGI:5805564|PMID:27760146) |
RGD |
PMID:27760146 |
MGI:5805564 |
NCBI chr 5:9,291,967...9,337,526
Ensembl chr 5:9,298,101...9,338,300
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Cdc45 |
cell division cycle 45 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr11:82,185,427...82,210,630
Ensembl chr11:82,185,473...82,210,619
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Hmgb1 |
high mobility group box 1 |
involved_in |
ISO |
(PMID:8006019) |
RGD |
PMID:8006019 |
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NCBI chr12:5,973,062...5,978,565
Ensembl chr12:5,901,586...5,978,565
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Thra |
thyroid hormone receptor alpha |
involved_in |
ISO IEA |
(PMID:8524305) GO_REF:0000107 |
RGD Ensembl |
PMID:8524305 |
GO_REF:0000107 |
NCBI chr10:83,701,885...83,729,408
Ensembl chr10:83,700,755...83,729,936
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Zfp827 |
zinc finger protein 827 |
involved_in |
ISO |
(PMID:25150861) |
RGD |
PMID:25150861 |
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NCBI chr19:28,720,568...28,887,381
Ensembl chr19:28,721,021...28,887,191
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Anp32b |
acidic nuclear phosphoprotein 32 family member B |
involved_in |
ISO |
(PMID:20538007) |
RGD |
PMID:20538007 |
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NCBI chr 5:60,743,077...60,765,726
Ensembl chr 5:60,743,443...60,765,717
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Asf1a |
anti-silencing function 1A histone chaperone |
acts_upstream_of_or_within involved_in |
ISO |
(PMID:11897662) (PMID:14718166) |
RGD |
PMID:11897662 PMID:14718166 |
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NCBI chr20:32,893,962...32,908,808
Ensembl chr20:32,893,573...32,908,808
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Asf1b |
anti-silencing function 1B histone chaperone |
acts_upstream_of_or_within involved_in |
ISO |
(MGI:2675150|PMID:12842904) (PMID:14718166) |
RGD |
PMID:12842904 PMID:14718166 |
MGI:2675150 |
NCBI chr19:24,181,024...24,195,604
Ensembl chr19:24,181,028...24,195,549
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Atrx |
ATRX, chromatin remodeler |
involved_in |
ISO ISS |
(PMID:20651253) GO_REF:0000024 |
RGD UniProt |
PMID:20651253 |
GO_REF:0000024 |
NCBI chr X:70,850,981...70,997,330
Ensembl chr X:70,850,981...70,997,330
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Baz1a |
bromodomain adjacent to zinc finger domain, 1A |
involved_in |
ISO |
(PMID:14759371) |
RGD |
PMID:14759371 |
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NCBI chr 6:72,389,701...72,512,516
Ensembl chr 6:72,389,703...72,512,459
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Brd2 |
bromodomain containing 2 |
involved_in |
ISO ISS |
(PMID:18406326) GO_REF:0000024 |
RGD UniProt |
PMID:18406326 |
GO_REF:0000024 |
NCBI chr20:4,727,078...4,735,389
Ensembl chr20:4,728,151...4,735,388
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Cabin1 |
calcineurin binding protein 1 |
involved_in |
ISO IEA |
(PMID:14718166) GO_REF:0000107 |
RGD Ensembl |
PMID:14718166 |
GO_REF:0000107 |
NCBI chr20:12,893,314...13,015,357
Ensembl chr20:12,893,358...13,015,357
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Chaf1a |
chromatin assembly factor 1 subunit A |
involved_in |
ISO IBA |
(PMID:14718166) PMID:21873635 |
RGD |
PMID:14718166 PMID:21873635 |
RGD:13792537 |
NCBI chr 9:873,953...900,701
Ensembl chr 9:874,051...900,654
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Chaf1b |
chromatin assembly factor 1 subunit B |
involved_in |
ISO IBA |
(PMID:14718166) PMID:21873635 |
RGD |
PMID:14718166 PMID:21873635 |
RGD:13792537 |
NCBI chr11:33,200,894...33,221,076
Ensembl chr11:33,200,981...33,221,070
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Chrac1 |
chromatin accessibility complex subunit 1 |
involved_in |
ISO |
(PMID:14759371) |
RGD |
PMID:14759371 |
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NCBI chr 7:105,013,047...105,016,435
Ensembl chr 7:105,013,015...105,017,136
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Daxx |
death-domain associated protein |
involved_in |
ISO |
(PMID:20504901), (PMID:20651253) (MGI:5567907|PMID:20651253) |
RGD |
PMID:20504901 PMID:20651253 |
MGI:5567907 |
NCBI chr20:4,970,090...4,976,145
Ensembl chr20:4,970,092...4,975,843
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Dnajc9 |
DnaJ heat shock protein family (Hsp40) member C9 |
involved_in |
ISO |
(PMID:33857403) |
RGD |
PMID:33857403 |
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NCBI chr15:3,923,842...3,928,118
Ensembl chr15:3,923,268...3,928,118
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Grwd1 |
glutamate-rich WD repeat containing 1 |
involved_in |
ISO ISS IEA |
(PMID:25990725), (PMID:27552915) GO_REF:0000024 GO_REF:0000107 |
RGD UniProt Ensembl |
PMID:25990725 PMID:27552915 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 1:96,301,260...96,306,962
Ensembl chr 1:96,301,261...96,307,201
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H1f0 |
H1.0 linker histone |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr 7:110,592,834...110,594,694
Ensembl chr 7:110,592,208...110,594,694
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H1f1 |
H1.1 linker histone, cluster member |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr17:41,366,268...41,367,011
Ensembl chr17:41,366,268...41,367,011
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H1f10 |
H1.10 linker histone |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr 4:120,440,515...120,444,705
Ensembl chr 4:120,440,870...120,441,448
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H1f2 |
H1.2 linker histone, cluster member |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr17:41,391,106...41,392,611
Ensembl chr17:41,388,477...41,392,635
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H1f4 |
H1.4 linker histone, cluster member |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr17:41,486,634...41,487,293
Ensembl chr17:41,486,560...41,487,403
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H1f5 |
H1.5 linker histone, cluster member |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr17:42,726,189...42,726,857
Ensembl chr17:42,726,127...42,769,160
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H1f6 |
H1.6 linker histone, cluster member |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr17:41,427,365...41,428,109
Ensembl chr17:41,427,323...41,428,119
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H1f8 |
H1.8 linker histone |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr 4:148,993,133...148,998,254
Ensembl chr 4:148,993,133...148,998,254
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H2ab3 |
H2A.B variant histone 3 |
involved_in |
ISO |
(PMID:22795134) |
RGD |
PMID:22795134 |
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NCBI chr X:82,362,633...82,362,983
Ensembl chr X:82,362,633...82,362,983
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H2bc1 |
H2B clustered histone 1 |
involved_in acts_upstream_of_or_within |
ISS ISO |
GO_REF:0000024 (MGI:3702345|PMID:17261847) (MGI:5502464|PMID:23884607) (PMID:24699735) |
UniProt RGD |
PMID:17261847 PMID:23884607 PMID:24699735 |
GO_REF:0000024 MGI:3702345 MGI:5502464 |
NCBI chr17:41,172,041...41,172,510
Ensembl chr17:41,171,903...41,176,782 Ensembl chr17:41,171,903...41,176,782
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H3c1 |
H3 clustered histone 1 |
involved_in |
ISO |
(PMID:14718166), (PMID:20498094), (PMID:21636898), (PMID:24699735), (PMID:25615412) |
RGD |
PMID:14718166 PMID:20498094 PMID:21636898 PMID:24699735 PMID:25615412 |
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NCBI chr17:41,367,824...41,368,902
Ensembl chr17:41,368,386...41,368,856
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H3c13 |
H3 clustered histone 13 |
involved_in |
ISO |
(PMID:21636898), (PMID:25615412) |
RGD |
PMID:21636898 PMID:25615412 |
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NCBI chr17:41,529,860...41,532,577
Ensembl chr 2:183,795,504...183,809,469 Ensembl chr17:183,795,504...183,809,469 Ensembl chr 2:183,795,504...183,809,469 Ensembl chr17:183,795,504...183,809,469 Ensembl chr17:183,795,504...183,809,469 Ensembl chr 2:183,795,504...183,809,469
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H3c15l-ps1 |
H3 clustered histone 15 like, pseudogene 1 |
involved_in |
ISO |
(PMID:21636898), (PMID:25615412) |
RGD |
PMID:21636898 PMID:25615412 |
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NCBI chr 2:183,797,721...183,800,653
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H3f3a |
H3.3 histone A |
involved_in |
ISO |
(PMID:21636898), (PMID:25615412) |
RGD |
PMID:21636898 PMID:25615412 |
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NCBI chr13:92,533,294...92,544,903
Ensembl chr13:92,533,298...92,544,908
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H3f3b |
H3.3 histone B |
involved_in |
ISO |
(PMID:21636898), (PMID:25615412) |
RGD |
PMID:21636898 PMID:25615412 |
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NCBI chr10:101,256,488...101,258,712
Ensembl chr10:101,256,480...101,258,709
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H3f4 |
H3.4 histone, cluster member |
involved_in |
ISO |
(PMID:20498094), (PMID:25615412) |
RGD |
PMID:20498094 PMID:25615412 |
|
NCBI chr10:43,740,797...43,741,207
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|
G |
H4c3 |
H4 clustered histone 3 |
involved_in |
ISO |
(PMID:14718166), (PMID:20498094), (PMID:21636898), (PMID:24699735), (PMID:25615412) |
RGD |
PMID:14718166 PMID:20498094 PMID:21636898 PMID:24699735 PMID:25615412 |
|
|
|
G |
H4cl1 |
histone H4C like 1 |
involved_in |
ISO |
(PMID:14718166), (PMID:20498094), (PMID:21636898), (PMID:24699735), (PMID:25615412) |
RGD |
PMID:14718166 PMID:20498094 PMID:21636898 PMID:24699735 PMID:25615412 |
|
NCBI chr17:41,368,743...41,426,735
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|
G |
H4cl2 |
histone H4C like 2 |
involved_in |
ISO |
(PMID:14718166), (PMID:20498094), (PMID:21636898), (PMID:24699735), (PMID:25615412) |
RGD |
PMID:14718166 PMID:20498094 PMID:21636898 PMID:24699735 PMID:25615412 |
|
NCBI chr17:41,526,192...41,575,488
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|
G |
H4f3 |
H1.3 linker histone, cluster member |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
|
GO_REF:0000002 |
NCBI chr17:41,528,576...41,554,586
Ensembl chr17:41,529,667...41,552,334
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|
G |
Hat1 |
histone acetyltransferase 1 |
involved_in |
ISO |
(PMID:14718166) |
RGD |
PMID:14718166 |
|
NCBI chr 3:56,217,344...56,265,021
Ensembl chr 3:56,217,342...56,275,517
|
|
G |
Hils1 |
histone linker H1 domain, spermatid-specific 1 |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
|
GO_REF:0000002 |
NCBI chr10:79,913,525...79,914,321
Ensembl chr10:79,913,480...79,914,321
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|
G |
Hira |
histone cell cycle regulator |
involved_in |
ISO |
(PMID:14718166) |
RGD |
PMID:14718166 |
|
NCBI chr11:82,024,469...82,133,212
Ensembl chr11:82,024,469...82,133,529
|
|
G |
Hist1h2ail1 |
histone cluster 1 H2a family member I like 1 |
involved_in |
ISO |
(PMID:14718166), (PMID:20498094), (PMID:21636898), (PMID:24699735), (PMID:25615412) |
RGD |
PMID:14718166 PMID:20498094 PMID:21636898 PMID:24699735 PMID:25615412 |
|
NCBI chr17:41,568,666...41,569,076
Ensembl chr17:41,568,471...41,569,109
|
|
G |
Hist1h2ao |
histone cluster 1, H2ao |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr17:42,704,740...42,705,130
Ensembl chr17:42,698,025...42,698,958
|
|
G |
Hist1h3b |
histone cluster 1, H3b |
involved_in |
ISO |
(PMID:14718166), (PMID:20498094), (PMID:21636898), (PMID:24699735), (PMID:25615412) |
RGD |
PMID:14718166 PMID:20498094 PMID:21636898 PMID:24699735 PMID:25615412 |
|
NCBI chr17:42,722,805...42,723,925
Ensembl chr17:42,723,450...42,723,911
|
|
G |
Hist1h4b |
histone cluster 1 H4 family member B |
involved_in |
IBA ISO |
PMID:21873635 (PMID:14718166), (PMID:20498094), (PMID:21636898), (PMID:24699735), (PMID:25615412) |
RGD |
PMID:14718166 PMID:20498094 PMID:21636898 PMID:24699735 PMID:25615412 PMID:21873635 More...
|
RGD:13792537 |
NCBI chr17:42,480,467...42,484,912
Ensembl chr17:42,480,313...42,485,370
|
|
G |
Hist1h4m |
histone cluster 1, H4m |
involved_in |
IBA ISO |
PMID:21873635 (PMID:14718166), (PMID:20498094), (PMID:21636898), (PMID:24699735), (PMID:25615412) |
RGD |
PMID:14718166 PMID:20498094 PMID:21636898 PMID:24699735 PMID:25615412 PMID:21873635 More...
|
RGD:13792537 |
NCBI chr17:42,698,054...42,698,365
Ensembl chr17:42,698,025...42,698,958
|
|
G |
Hist2h3c2 |
histone cluster 2 H3 family member C2 |
involved_in |
ISO |
(PMID:21636898), (PMID:25615412) |
RGD |
PMID:21636898 PMID:25615412 |
|
NCBI chr 2:183,837,311...183,837,721
Ensembl chr 2:183,837,303...183,837,752
|
|
G |
Hist2h4 |
histone cluster 2, H4 |
involved_in |
IBA ISO |
PMID:21873635 (PMID:14718166), (PMID:20498094), (PMID:21636898), (PMID:24699735), (PMID:25615412) |
RGD |
PMID:14718166 PMID:20498094 PMID:21636898 PMID:24699735 PMID:25615412 PMID:21873635 More...
|
RGD:13792537 |
NCBI chr 2:183,831,601...183,831,996
Ensembl chr 2:183,825,994...183,832,048
|
|
G |
Hist2h4a |
histone cluster 2 H4 family member A |
involved_in |
ISO |
(PMID:14718166), (PMID:20498094), (PMID:21636898), (PMID:24699735), (PMID:25615412) |
RGD |
PMID:14718166 PMID:20498094 PMID:21636898 PMID:24699735 PMID:25615412 |
|
|
|
G |
Hmgb1 |
high mobility group box 1 |
involved_in |
ISO |
(PMID:2465778) |
RGD |
PMID:2465778 |
|
NCBI chr12:5,973,062...5,978,565
Ensembl chr12:5,901,586...5,978,565
|
|
G |
Hmgb2 |
high mobility group box 2 |
involved_in |
ISO |
(PMID:2465778) |
RGD |
PMID:2465778 |
|
NCBI chr16:32,710,651...32,713,230
Ensembl chr16:32,710,658...32,713,140
|
|
G |
Hp1bp3 |
heterochromatin protein 1, binding protein 3 |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
|
GO_REF:0000002 |
NCBI chr 5:150,435,781...150,463,004
Ensembl chr 5:150,433,740...150,463,000
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|
G |
Kat6a |
lysine acetyltransferase 6A |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
|
GO_REF:0000002 |
NCBI chr16:69,084,914...69,165,923
Ensembl chr16:69,084,914...69,163,606
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|
G |
Kat6b |
lysine acetyltransferase 6B |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
|
GO_REF:0000002 |
NCBI chr15:2,638,885...2,811,977
Ensembl chr15:2,639,200...2,812,316
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|
G |
LOC100912290 |
histone H4-like |
involved_in |
ISO |
(PMID:14718166), (PMID:20498094), (PMID:21636898), (PMID:24699735), (PMID:25615412) |
RGD |
PMID:14718166 PMID:20498094 PMID:21636898 PMID:24699735 PMID:25615412 |
|
|
|
G |
LOC317165 |
similar to Set alpha isoform |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
|
GO_REF:0000002 |
NCBI chr18:39,589,341...39,596,429
Ensembl chr18:39,589,341...39,596,429
|
|
G |
LOC684819 |
similar to H3 histone, family 2 isoform 2 |
involved_in |
ISO |
(PMID:14718166), (PMID:20498094), (PMID:21636898), (PMID:24699735), (PMID:25615412) |
RGD |
PMID:14718166 PMID:20498094 PMID:21636898 PMID:24699735 PMID:25615412 |
|
|
|
G |
LOC684841 |
similar to CG31613-PA |
involved_in |
ISO |
(PMID:14718166), (PMID:20498094), (PMID:21636898), (PMID:24699735), (PMID:25615412) |
RGD |
PMID:14718166 PMID:20498094 PMID:21636898 PMID:24699735 PMID:25615412 |
|
|
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G |
Macroh2a1 |
macroH2A.1 histone |
involved_in |
IEA |
GO_REF:0000104 GO_REF:0000002 |
UniProt InterPro |
|
GO_REF:0000002 GO_REF:0000104 |
NCBI chr17:8,479,331...8,542,071
Ensembl chr17:8,479,372...8,542,072
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|
G |
Macroh2a2 |
macroH2A.2 histone |
involved_in |
IEA |
GO_REF:0000104 |
UniProt |
|
GO_REF:0000104 |
NCBI chr20:29,678,194...29,727,867
Ensembl chr20:29,678,222...29,727,891
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|
G |
Mcm2 |
minichromosome maintenance complex component 2 |
acts_upstream_of_or_within |
ISO |
(MGI:2156014|PMID:10531422) |
RGD |
PMID:10531422 |
MGI:2156014 |
NCBI chr 4:121,346,434...121,360,962
Ensembl chr 4:121,346,434...121,360,847
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|
G |
Naa60 |
N(alpha)-acetyltransferase 60, NatF catalytic subunit |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:21981917) |
UniProt RGD |
PMID:21981917 |
GO_REF:0000024 |
NCBI chr10:11,622,554...11,653,078
Ensembl chr10:11,587,916...11,642,755
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|
G |
Nap1l1 |
nucleosome assembly protein 1-like 1 |
involved_in |
IEA IBA |
GO_REF:0000002 PMID:21873635 |
InterPro |
PMID:21873635 |
GO_REF:0000002, RGD:13792537 |
NCBI chr 7:46,933,278...46,957,853
Ensembl chr 7:46,933,356...46,956,593
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|
G |
Nap1l2 |
nucleosome assembly protein 1-like 2 |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
|
GO_REF:0000002 |
NCBI chr X:68,174,051...68,176,449
Ensembl chr X:68,173,987...68,176,666
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|
G |
Nap1l3 |
nucleosome assembly protein 1-like 3 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr X:88,347,595...88,350,393
Ensembl chr X:88,347,598...88,350,393
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|
G |
Nap1l4 |
nucleosome assembly protein 1-like 4 |
involved_in |
ISO IBA IEA ISS |
(PMID:9325046) PMID:21873635 GO_REF:0000002 GO_REF:0000107 (MGI:5897488|PMID:28366643) GO_REF:0000024 |
RGD InterPro Ensembl UniProt |
PMID:9325046 PMID:28366643 PMID:21873635 |
GO_REF:0000002 GO_REF:0000024 GO_REF:0000107 MGI:5897488, RGD:13792537 |
NCBI chr 1:198,709,697...198,746,093
Ensembl chr 1:198,709,701...198,746,020
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|
G |
Nap1l5 |
nucleosome assembly protein 1-like 5 |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
|
GO_REF:0000002 |
NCBI chr 4:88,022,670...88,024,988
Ensembl chr 4:88,022,569...88,024,654
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|
G |
Nasp |
nuclear autoantigenic sperm protein |
involved_in |
ISO |
(PMID:25615412) (PMID:14718166) |
RGD |
PMID:14718166 PMID:25615412 |
|
NCBI chr 5:130,057,363...130,083,003
Ensembl chr 5:130,057,363...130,082,928
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|
G |
Npm1 |
nucleophosmin 1 |
involved_in |
ISO |
(PMID:11602260) |
RGD |
PMID:11602260 |
|
NCBI chr10:17,741,512...17,751,626
Ensembl chr10:17,739,941...17,751,645
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|
G |
Padi4 |
peptidyl arginine deiminase 4 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:5545819|PMID:24463520) |
UniProt RGD |
PMID:24463520 |
GO_REF:0000024 MGI:5545819 |
NCBI chr 5:153,041,351...153,074,412
Ensembl chr 5:153,041,352...153,074,362
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|
G |
Pkn3 |
protein kinase N3 |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
|
GO_REF:0000002 |
NCBI chr 3:13,350,082...13,363,572
Ensembl chr 3:13,335,041...13,363,567
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|
G |
Pole3 |
DNA polymerase epsilon 3, accessory subunit |
involved_in |
ISO |
(PMID:14759371) |
RGD |
PMID:14759371 |
|
NCBI chr 5:75,973,941...75,977,175
Ensembl chr 5:75,974,717...75,977,231
|
|
G |
Rbbp4 |
RB binding protein 4, chromatin remodeling factor |
involved_in |
ISO |
(PMID:14718166) |
RGD |
PMID:14718166 |
|
NCBI chr 5:141,655,863...141,675,157
Ensembl chr 5:141,638,421...141,675,284
|
|
G |
RGD1560617 |
hypothetical gene supported by NM_053561; AF062594 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 7:118,084,674...118,085,850
Ensembl chr 7:118,084,696...118,085,850
|
|
G |
RGD1562378 |
histone H4 variant H4-v.1 |
involved_in |
ISO |
(PMID:14718166), (PMID:20498094), (PMID:21636898), (PMID:24699735), (PMID:25615412) |
RGD |
PMID:14718166 PMID:20498094 PMID:21636898 PMID:24699735 PMID:25615412 |
|
|
|
G |
RGD1563307 |
similar to Set beta isoform |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
|
GO_REF:0000002 |
NCBI chr 1:86,449,036...86,453,703
Ensembl chr X:119,908,942...119,909,886 Ensembl chr 1:119,908,942...119,909,886
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|
G |
Rsf1 |
remodeling and spacing factor 1 |
involved_in |
ISO |
(PMID:11691835), (PMID:12972596) |
RGD |
PMID:11691835 PMID:12972596 |
|
NCBI chr 1:151,892,055...152,015,089
Ensembl chr 1:151,892,434...152,009,051
|
|
G |
Sart3 |
spliceosome associated factor 3, U4/U6 recycling protein |
involved_in |
ISO |
(PMID:24526689) |
RGD |
PMID:24526689 |
|
NCBI chr12:42,859,026...42,887,041
Ensembl chr12:42,859,305...42,887,038
|
|
G |
Set |
Set nuclear proto-oncogene |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
|
GO_REF:0000002 |
NCBI chr 3:13,334,564...13,345,598
Ensembl chr 3:13,335,041...13,363,567
|
|
G |
Setsip |
SET like protein |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
|
GO_REF:0000002 |
NCBI chr19:53,561,262...53,562,780
Ensembl chr19:53,561,190...53,563,819
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|
G |
Shprh |
SNF2 histone linker PHD RING helicase |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
|
GO_REF:0000002 |
NCBI chr 1:5,528,827...5,602,537
Ensembl chr 1:5,528,888...5,602,527
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|
G |
Smarca5 |
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 |
involved_in |
ISO |
(PMID:11691835), (PMID:12972596), (PMID:14759371) |
RGD |
PMID:11691835 PMID:12972596 PMID:14759371 |
|
NCBI chr19:27,271,918...27,304,594
Ensembl chr19:27,271,148...27,304,594
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|
G |
Smyd3 |
SET and MYND domain containing 3 |
acts_upstream_of_or_within |
ISO |
(MGI:5500979|PMID:23752591) |
RGD |
PMID:23752591 |
MGI:5500979 |
NCBI chr13:90,709,263...91,266,209
Ensembl chr13:90,709,270...91,266,253
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|
G |
Sox9 |
SRY-box transcription factor 9 |
involved_in |
ISO ISS |
(PMID:20484372) GO_REF:0000024 |
RGD UniProt |
PMID:20484372 |
GO_REF:0000024 |
NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
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|
G |
Spty2d1 |
SPT2 chromatin protein domain containing 1 |
involved_in |
ISO IBA |
(PMID:23378026) PMID:21873635 |
RGD |
PMID:23378026 PMID:21873635 |
RGD:13792537 |
NCBI chr 1:97,531,495...97,549,633
Ensembl chr 1:97,531,508...97,549,581
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|
G |
Tspy1 |
testis specific protein, Y-linked 1 |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
|
GO_REF:0000002 |
|
|
G |
Tspy26 |
testis specific protein, Y-linked 26 |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
|
GO_REF:0000002 |
NCBI chr 3:141,690,653...141,692,729
Ensembl chr 3:141,689,899...141,692,670
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|
G |
Tspyl2 |
TSPY-like 2 |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
|
GO_REF:0000002 |
NCBI chr X:21,439,478...21,445,208
Ensembl chr X:21,439,478...21,445,089
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|
G |
Tspyl4 |
TSPY-like 4 |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
|
GO_REF:0000002 |
NCBI chr20:38,098,756...38,100,752
Ensembl chr20:38,098,677...38,103,053
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|
G |
Tspyl5 |
TSPY-like 5 |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
|
GO_REF:0000002 |
NCBI chr 7:64,881,092...64,885,538
Ensembl chr 7:64,884,225...64,885,457
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|
G |
Ubn1 |
ubinuclein 1 |
involved_in |
ISO |
(PMID:14718166) |
RGD |
PMID:14718166 |
|
NCBI chr10:10,496,576...10,532,010
Ensembl chr10:10,496,576...10,532,010
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|
|
G |
Gtf2h5 |
general transcription factor IIH subunit 5 |
involved_in acts_upstream_of_or_within |
IBA ISO |
PMID:21873635 MGI:5514340 (MGI:5506835|PMID:23637614) |
RGD |
PMID:23637614 PMID:21873635 |
MGI:5506835, RGD:13792537 |
NCBI chr 1:46,656,804...46,663,512
Ensembl chr 1:46,656,859...46,664,939
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|
G |
LOC120103497 |
general transcription factor IIH subunit 5-like |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 6:27,109,209...27,114,478
Ensembl chr 6:27,111,331...27,111,546
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|
|
G |
Ahr |
aryl hydrocarbon receptor |
acts_upstream_of_or_within |
ISO |
(MGI:62922|PMID:8215422) |
RGD |
PMID:8215422 |
MGI:62922 |
NCBI chr 6:52,234,089...52,271,568
Ensembl chr 6:52,234,089...52,271,568
|
|
G |
Cand1 |
cullin-associated and neddylation-dissociated 1 |
involved_in |
IDA |
PMID:10567521 |
UniProt |
PMID:10567521 |
RGD:8553447 |
NCBI chr 7:54,681,114...54,719,002
Ensembl chr 7:54,680,900...54,718,993
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|
G |
Creb1 |
cAMP responsive element binding protein 1 |
|
IMP |
|
RGD |
PMID:16891311 |
RGD:1625706 |
NCBI chr 9:65,903,511...65,972,562
Ensembl chr 9:65,903,547...65,970,816
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|
G |
Ikzf1 |
IKAROS family zinc finger 1 |
acts_upstream_of_or_within |
ISO |
MGI:2158690 (MGI:5317044|PMID:21245044) |
RGD |
PMID:21245044 |
MGI:5317044 |
NCBI chr14:86,255,065...86,340,839
Ensembl chr14:86,255,065...86,342,416
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|
G |
Psmc6 |
proteasome 26S subunit, ATPase 6 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr15:18,542,585...18,564,057
Ensembl chr15:18,542,563...18,564,055
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|
G |
Tp53 |
tumor protein p53 |
involved_in |
ISO |
(PMID:24289924) |
RGD |
PMID:24289924 |
|
NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
|
|
G |
Wnt10b |
Wnt family member 10B |
acts_upstream_of_or_within |
ISO |
(MGI:3820325|PMID:19056892) |
RGD |
PMID:19056892 |
MGI:3820325 |
NCBI chr 7:129,922,088...129,927,892
Ensembl chr 7:129,922,088...129,927,892
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|
|
G |
Terf1 |
telomeric repeat binding factor 1 |
involved_in |
ISO |
(PMID:24270157) |
RGD |
PMID:24270157 |
|
NCBI chr 5:3,443,103...3,472,377
Ensembl chr 5:3,443,106...3,472,340
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|
|
G |
Kntc1 |
kinetochore associated 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr12:32,769,020...32,839,617
Ensembl chr12:32,769,020...32,839,561
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H3f3b |
H3.3 histone B |
acts_upstream_of_or_within |
ISO |
MGI:5474462 (MGI:5474379|PMID:23570311) |
RGD |
PMID:23570311 |
MGI:5474379 |
NCBI chr10:101,256,488...101,258,712
Ensembl chr10:101,256,480...101,258,709
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Rnf4 |
ring finger protein 4 |
involved_in |
ISO ISS IEA |
(PMID:20212317) GO_REF:0000024 GO_REF:0000107 |
RGD UniProt Ensembl |
PMID:20212317 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr14:76,401,292...76,423,270
Ensembl chr14:76,401,299...76,422,566
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Senp6 |
SUMO specific peptidase 6 |
involved_in |
IBA ISO |
PMID:21873635 (PMID:20212317) |
RGD |
PMID:20212317 PMID:21873635 |
RGD:13792537 |
NCBI chr 8:80,988,675...81,071,606
Ensembl chr 8:80,989,052...81,067,170
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Trappc12 |
trafficking protein particle complex subunit 12 |
involved_in |
ISO |
(PMID:25918224) |
RGD |
PMID:25918224 |
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NCBI chr 6:45,321,496...45,386,967
Ensembl chr 6:45,321,497...45,386,952
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Atf7ip |
activating transcription factor 7 interacting protein |
involved_in |
ISO |
(PMID:12665582) |
RGD |
PMID:12665582 |
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NCBI chr 4:169,385,872...169,471,652
Ensembl chr 4:169,385,872...169,471,650
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Baz2a |
bromodomain adjacent to zinc finger domain, 2A |
involved_in |
IEA |
GO_REF:0000108 |
GOC |
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GO_REF:0000108 |
NCBI chr 7:523,204...560,911
Ensembl chr 7:523,265...560,659
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Pih1d1 |
PIH1 domain containing 1 |
involved_in |
IEA |
GO_REF:0000108 |
GOC |
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GO_REF:0000108 |
NCBI chr 1:95,639,597...95,645,295
Ensembl chr 1:95,639,592...95,645,290
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Polr1e |
RNA polymerase I subunit E |
involved_in acts_upstream_of_or_within |
IBA ISO |
PMID:21873635 (MGI:1928312|PMID:8641287) |
RGD |
PMID:8641287 PMID:21873635 |
MGI:1928312, RGD:13792537 |
NCBI chr 5:59,279,456...59,295,346
Ensembl chr 5:59,279,460...59,295,369
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Rrn3 |
RRN3 homolog, RNA polymerase I transcription factor |
involved_in |
IEA |
GO_REF:0000108 |
GOC |
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GO_REF:0000108 |
NCBI chr10:2,129,949...2,165,381
Ensembl chr10:2,129,978...2,165,663
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Smarca4 |
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 |
involved_in |
IEA |
GO_REF:0000108 |
GOC |
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GO_REF:0000108 |
NCBI chr 8:20,167,717...20,258,975
Ensembl chr 8:20,167,717...20,258,975
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Smarcb1 |
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 |
involved_in |
IEA |
GO_REF:0000108 |
GOC |
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GO_REF:0000108 |
NCBI chr20:12,741,164...12,763,616
Ensembl chr20:12,741,477...12,763,620
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Taf1b |
TATA-box binding protein associated factor, RNA polymerase I subunit B |
involved_in |
ISO IEA ISS |
(PMID:21921199) GO_REF:0000002 GO_REF:0000024 |
RGD InterPro UniProt |
PMID:21921199 |
GO_REF:0000002 GO_REF:0000024 |
NCBI chr 6:41,116,980...41,194,593
Ensembl chr 6:41,117,420...41,194,593
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Taf1c |
TATA-box binding protein associated factor, RNA polymerase 1 subunit C |
involved_in |
IEA |
GO_REF:0000108 |
GOC |
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GO_REF:0000108 |
NCBI chr19:47,652,451...47,658,971
Ensembl chr19:47,652,452...47,658,971
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Ubtf |
upstream binding transcription factor |
involved_in |
IEA |
GO_REF:0000108 |
GOC |
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GO_REF:0000108 |
NCBI chr10:87,258,217...87,274,291
Ensembl chr10:87,258,217...87,272,969
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Dr1 |
down-regulator of transcription 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr14:1,458,223...1,469,578
Ensembl chr14:1,458,223...1,469,638
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Esr1 |
estrogen receptor 1 |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:9841876) |
Ensembl RGD |
PMID:9841876 |
GO_REF:0000107 |
NCBI chr 1:41,106,335...41,499,104
Ensembl chr 1:41,210,475...41,495,002
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Gtf2a2 |
general transcription factor 2A subunit 2 |
involved_in |
ISO IBA |
(PMID:7958899), (PMID:8626665) PMID:21873635 |
RGD |
PMID:7958899 PMID:8626665 PMID:21873635 |
RGD:13792537 |
NCBI chr 8:70,662,395...70,675,576
Ensembl chr 8:70,662,428...70,675,569
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Gtf2b |
general transcription factor IIB |
involved_in |
IEA IBA ISS ISO |
GO_REF:0000107 PMID:21873635 GO_REF:0000024 (PMID:3029109), (PMID:8413225), (PMID:9841876) |
Ensembl UniProt RGD |
PMID:3029109 PMID:8413225 PMID:9841876 PMID:21873635 |
GO_REF:0000024 GO_REF:0000107, RGD:13792537 |
NCBI chr 2:231,767,317...231,785,626
Ensembl chr 2:231,767,238...231,785,651
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Gtf2f2 |
general transcription factor IIF subunit 2 |
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IDA |
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RGD |
PMID:7929273 |
RGD:9681417 |
NCBI chr15:51,206,027...51,327,166
Ensembl chr15:51,206,031...51,327,253
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RGD1562272 |
similar to TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr10:73,781,281...73,783,163
Ensembl chr10:73,781,269...73,782,563
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Taf1 |
TATA-box binding protein associated factor 1 |
involved_in |
ISO |
(PMID:27007846) |
RGD |
PMID:27007846 |
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NCBI chr X:66,640,915...66,716,543
Ensembl chr X:66,640,982...66,716,543
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Taf10 |
TATA-box binding protein associated factor 10 |
involved_in |
ISO |
(PMID:27007846) MGI:3606185 (MGI:5918349|PMID:28893950) |
RGD |
PMID:27007846 PMID:28893950 |
MGI:5918349 |
NCBI chr 1:160,095,108...160,096,401
Ensembl chr 1:160,095,108...160,096,376
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Taf11 |
TATA-box binding protein associated factor 11 |
involved_in |
ISO IEA IBA |
(PMID:27007846) GO_REF:0000002 PMID:21873635 |
RGD InterPro |
PMID:27007846 PMID:21873635 |
GO_REF:0000002, RGD:13792537 |
NCBI chr20:5,955,774...5,963,593
Ensembl chr20:5,955,777...5,961,905
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Taf12 |
TATA-box binding protein associated factor 12 |
involved_in |
ISO IBA |
(PMID:27007846) PMID:21873635 |
RGD |
PMID:27007846 PMID:21873635 |
RGD:13792537 |
NCBI chr 5:144,472,816...144,490,299
Ensembl chr 5:144,472,841...144,488,849
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Taf13 |
TATA-box binding protein associated factor 13 |
involved_in |
ISO |
(PMID:27007846) |
RGD |
PMID:27007846 |
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NCBI chr 2:196,205,219...196,215,882
Ensembl chr 2:196,205,243...196,215,878
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Taf2 |
TATA-box binding protein associated factor 2 |
involved_in |
ISO |
(PMID:27007846) |
RGD |
PMID:27007846 |
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NCBI chr 7:86,422,613...86,479,616
Ensembl chr 7:86,422,613...86,479,616
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Taf3 |
TATA-box binding protein associated factor 3 |
involved_in |
ISO |
(PMID:27007846) |
RGD |
PMID:27007846 |
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NCBI chr17:68,455,389...68,608,367
Ensembl chr17:68,423,909...68,608,367
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Taf4 |
TATA-box binding protein associated factor 4 |
involved_in |
ISO |
(PMID:27007846) |
RGD |
PMID:27007846 |
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NCBI chr 3:167,017,992...167,083,413
Ensembl chr 3:167,017,993...167,083,356
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Taf5 |
TATA-box binding protein associated factor 5 |
involved_in |
ISO |
(PMID:27007846) |
RGD |
PMID:27007846 |
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NCBI chr 1:245,958,428...245,973,914
Ensembl chr 1:245,958,428...245,973,914
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Taf6 |
TATA-box binding protein associated factor 6 |
involved_in |
ISO IBA |
(PMID:27007846) PMID:21873635 |
RGD |
PMID:27007846 PMID:21873635 |
RGD:13792537 |
NCBI chr12:17,055,864...17,064,244
Ensembl chr12:17,055,873...17,064,247
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Taf6l |
TATA-box binding protein associated factor 6 like |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 1:205,672,147...205,684,721
Ensembl chr 1:205,672,149...205,684,655
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Taf7 |
TATA-box binding protein associated factor 7 |
involved_in |
ISO IBA |
(PMID:27007846) PMID:21873635 |
RGD |
PMID:27007846 PMID:21873635 |
RGD:13792537 |
NCBI chr18:29,459,937...29,462,086
Ensembl chr18:29,452,943...29,462,134
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Taf7l |
TATA-box binding protein associated factor 7-like |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr X:97,660,222...97,675,241
Ensembl chr X:97,660,222...97,675,023
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Taf7l-ps1 |
TAF7-like RNA polymerase II, TATA box binding protein (TBP)-associated factor, pseudogene 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 7:51,763,259...51,764,401
Ensembl chr 7:51,763,259...51,764,401
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Taf8 |
TATA-box binding protein associated factor 8 |
involved_in |
ISO |
(PMID:27007846) |
RGD |
PMID:27007846 |
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NCBI chr 9:13,491,892...13,511,713
Ensembl chr 9:13,491,937...13,511,717
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Taf9 |
TATA-box binding protein associated factor 9 |
involved_in |
ISO IBA IEA |
(PMID:27007846) PMID:21873635 GO_REF:0000107 |
RGD Ensembl |
PMID:27007846 PMID:21873635 |
GO_REF:0000107, RGD:13792537 |
NCBI chr 2:31,794,316...31,798,324
Ensembl chr 2:31,794,142...31,798,769
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Tbp |
TATA box binding protein |
involved_in |
ISO |
(PMID:27007846), (PMID:9841876) |
RGD |
PMID:9841876 PMID:27007846 |
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NCBI chr 1:56,463,330...56,480,430
Ensembl chr 1:56,463,618...56,510,016
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Bdp1 |
B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 2:31,457,523...31,470,119
Ensembl chr 2:31,378,924...31,470,119
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Brf1 |
BRF1, RNA polymerase III transcription initiation factor subunit |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr 6:132,034,380...132,081,296
Ensembl chr 6:132,037,272...132,081,278
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Brf2 |
BRF2, RNA polymerase III transcription initiation factor subunit |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr16:64,928,334...64,933,057
Ensembl chr16:64,928,300...64,933,059
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Gtf2b |
general transcription factor IIB |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr 2:231,767,317...231,785,626
Ensembl chr 2:231,767,238...231,785,651
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Nfkbiz |
NFKB inhibitor zeta |
involved_in |
ISO |
MGI:3046930 (MGI:3796491|PMID:18319258) |
RGD |
PMID:18319258 |
MGI:3796491 |
NCBI chr11:44,782,676...44,810,723
Ensembl chr11:44,782,676...44,810,723
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Term paths to the root
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