ONTOLOGY REPORT - ANNOTATIONS |
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Term: | protein-DNA complex assembly |
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Accession: | GO:0065004
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browse the term
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Definition: | The aggregation, arrangement and bonding together of proteins and DNA molecules to form a protein-DNA complex. |
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G
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Ep300
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E1A binding protein p300
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IDA
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p53, CBP, p21/WAF1 promoter
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RGD |
PMID:9215639 |
RGD:2312285 |
NCBI chr 7:114,987,857...115,058,652
Ensembl chr 7:113,106,247...113,136,088 Ensembl chr 7:113,106,247...113,136,088
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G
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Hey2
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hes-related family bHLH transcription factor with YRPW motif 2
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acts_upstream_of_or_within
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ISO IEA
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(PMID:10692439), (PMID:16603706) GO_REF:0000107
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RGD Ensembl |
PMID:10692439 PMID:16603706 |
GO_REF:0000107 |
NCBI chr 1:28,641,100...28,651,187
Ensembl chr 1:26,822,131...26,832,218
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G
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Hnf1b
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HNF1 homeobox B
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IMP
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RGD |
PMID:9545279 |
RGD:2312721 |
NCBI chr10:68,735,894...68,789,888
Ensembl chr10:68,735,894...68,789,888
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G
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Pias1
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protein inhibitor of activated STAT, 1
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IMP
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RGD |
PMID:16135793 |
RGD:2303115 |
NCBI chr 8:72,233,566...72,347,085
Ensembl chr 8:63,338,150...63,438,905
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G
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Tcf4
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transcription factor 4
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involved_in
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ISO
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(PMID:8978694)
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RGD |
PMID:8978694 |
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NCBI chr18:62,941,739...63,288,126
Ensembl chr18:62,943,782...63,284,425
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G
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Cenpa
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centromere protein A
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involved_in
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ISO IEA
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(PMID:11682612) GO_REF:0000107
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RGD Ensembl |
PMID:11682612 |
GO_REF:0000107 |
NCBI chr 6:31,420,062...31,431,703
Ensembl chr 6:25,700,142...25,711,675
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G
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Cenpi
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centromere protein I
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involved_in
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IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr X:97,515,919...97,567,671
Ensembl chr X:97,515,972...97,567,657
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G
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Cenpn
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centromere protein N
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involved_in
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IEA
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GO_REF:0000002
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InterPro |
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GO_REF:0000002 |
NCBI chr19:44,971,265...44,994,019
Ensembl chr19:44,968,308...44,994,012
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G
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Cenpp
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centromere protein P
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involved_in
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IEA
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GO_REF:0000002
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InterPro |
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GO_REF:0000002 |
NCBI chr17:15,014,087...15,189,312
Ensembl chr17:15,014,058...15,189,304
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G
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Hjurp
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Holliday junction recognition protein
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involved_in
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ISO IBA
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(PMID:19410544), (PMID:19410545) GO_REF:0000033
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RGD GO_Central |
PMID:19410544 PMID:19410545 |
GO_REF:0000033 |
NCBI chr 9:88,853,379...88,867,730
Ensembl chr 9:88,853,386...88,867,728
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G
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Itgb3bp
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integrin subunit beta 3 binding protein
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involved_in
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IEA
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GO_REF:0000002
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InterPro |
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GO_REF:0000002 |
NCBI chr 5:114,460,217...114,525,538
Ensembl chr 5:114,460,221...114,525,704
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G
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Mis18a
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MIS18 kinetochore protein A
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involved_in acts_upstream_of_or_within
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IBA ISO
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GO_REF:0000033 MGI:5441069 (PMID:22516971)
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GO_Central RGD |
PMID:22516971 |
GO_REF:0000033 |
NCBI chr11:29,968,030...29,981,058
Ensembl chr11:29,967,701...29,981,062
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G
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Nasp
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nuclear autoantigenic sperm protein
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involved_in
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IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr 5:130,057,363...130,083,003
Ensembl chr 5:130,057,363...130,082,928
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G
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Oip5
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Opa interacting protein 5
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involved_in
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IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr 3:106,593,746...106,603,281
Ensembl chr 3:106,593,760...106,603,250
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G
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Cenpi
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centromere protein I
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involved_in
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IEA
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GO_REF:0000002
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InterPro |
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GO_REF:0000002 |
NCBI chr X:97,515,919...97,567,671
Ensembl chr X:97,515,972...97,567,657
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G
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Cenpo
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centromere protein O
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involved_in
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IEA
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GO_REF:0000002
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InterPro |
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GO_REF:0000002 |
NCBI chr 6:32,923,127...32,937,879
Ensembl chr 6:27,188,537...27,218,314
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G
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Cenpv
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centromere protein V
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involved_in
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ISO IEA
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(PMID:18772885) GO_REF:0000107
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RGD Ensembl |
PMID:18772885 |
GO_REF:0000107 |
NCBI chr10:47,713,778...47,746,800
Ensembl chr10:47,214,490...47,228,761
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G
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Dmc1
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DNA meiotic recombinase 1
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involved_in
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IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr 7:113,005,278...113,047,854
Ensembl chr 7:111,124,888...111,167,952
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G
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Rad51
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RAD51 recombinase
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involved_in
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ISO IEA
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(PMID:26681308) GO_REF:0000107
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RGD Ensembl |
PMID:26681308 |
GO_REF:0000107 |
NCBI chr 3:126,554,210...126,578,888
Ensembl chr 3:106,100,381...106,125,035
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G
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Rad52
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RAD52 homolog, DNA repair protein
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involved_in
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IEA
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GO_REF:0000002
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InterPro |
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GO_REF:0000002 |
NCBI chr 4:153,106,062...153,128,598
Ensembl chr 4:153,106,062...153,128,207
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G
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Cdt1
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chromatin licensing and DNA replication factor 1
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involved_in
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ISO IEA IBA
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(PMID:11125146) GO_REF:0000107 GO_REF:0000002 GO_REF:0000033
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RGD Ensembl InterPro GO_Central |
PMID:11125146 |
GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 |
NCBI chr19:50,620,713...50,625,659
Ensembl chr19:50,620,713...50,625,659
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G
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Gmnn
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geminin, DNA replication inhibitor
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involved_in
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ISO IEA
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(PMID:11125146) GO_REF:0000107
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RGD Ensembl |
PMID:11125146 |
GO_REF:0000107 |
NCBI chr17:40,301,771...40,310,054
Ensembl chr17:40,301,808...40,310,054
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G
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Cenpa
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centromere protein A
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involved_in
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ISO IEA
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(PMID:11682612) GO_REF:0000107
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RGD Ensembl |
PMID:11682612 |
GO_REF:0000107 |
NCBI chr 6:31,420,062...31,431,703
Ensembl chr 6:25,700,142...25,711,675
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G
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Cenpc
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centromere protein C
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involved_in
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ISO IEA IBA
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(PMID:21529714) GO_REF:0000002 GO_REF:0000107 GO_REF:0000033
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RGD InterPro Ensembl GO_Central |
PMID:21529714 |
GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 |
NCBI chr14:21,988,067...22,046,732
Ensembl chr14:21,988,144...22,055,476
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G
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Cenpe
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centromere protein E
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involved_in
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ISO IEA
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(PMID:9763420) GO_REF:0000107
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RGD Ensembl |
PMID:9763420 |
GO_REF:0000107 |
NCBI chr 2:226,310,970...226,369,636
Ensembl chr 2:223,636,998...223,695,669
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G
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Cenph
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centromere protein H
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involved_in
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IEA
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GO_REF:0000002
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InterPro |
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GO_REF:0000002 |
NCBI chr 2:31,896,675...31,910,179
Ensembl chr 2:31,894,667...31,910,154
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G
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Cenpk
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centromere protein K
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involved_in
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IEA
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GO_REF:0000002
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InterPro |
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GO_REF:0000002 |
NCBI chr 2:35,360,390...35,421,372
Ensembl chr 2:35,360,132...35,385,706
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G
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Cenpt
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centromere protein T
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involved_in
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ISO IEA ISS
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(PMID:21529714) GO_REF:0000002 GO_REF:0000024
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RGD InterPro UniProt |
PMID:21529714 |
GO_REF:0000002 GO_REF:0000024 |
NCBI chr19:33,734,684...33,741,159
Ensembl chr19:33,734,685...33,741,142
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G
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Cenpw
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centromere protein W
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involved_in
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ISS IEA IBA ISO
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GO_REF:0000024 GO_REF:0000002 GO_REF:0000033 (PMID:21695110)
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UniProt InterPro GO_Central RGD |
PMID:21695110 |
GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 |
NCBI chr 1:27,525,324...27,530,464
Ensembl chr 1:27,525,324...27,530,464
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G
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Cenpwl1
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centromere protein W like 1
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involved_in
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IBA IEA
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GO_REF:0000033 GO_REF:0000002
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GO_Central InterPro |
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GO_REF:0000002 GO_REF:0000033 |
NCBI chr X:53,848,491...53,848,803
Ensembl chr X:53,848,510...53,848,770
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G
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Dlgap5
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DLG associated protein 5
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involved_in
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IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr15:20,633,964...20,664,569
Ensembl chr15:20,633,966...20,664,518
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G
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ENSRNOG00000068966
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involved_in
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IEA
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GO_REF:0000002
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InterPro |
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GO_REF:0000002 |
Ensembl chr10:13,018,919...13,019,963
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G
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Mis12
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MIS12 kinetochore complex component
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involved_in
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ISO IBA IEA
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(PMID:16585270) GO_REF:0000033 GO_REF:0000107
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RGD GO_Central Ensembl |
PMID:16585270 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr10:55,739,741...55,747,915
Ensembl chr10:55,739,564...55,751,068
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G
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Pogz
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pogo transposable element derived with ZNF domain
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involved_in
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ISO
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(PMID:20562864)
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RGD |
PMID:20562864 |
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NCBI chr 2:182,394,269...182,440,711
Ensembl chr 2:182,380,768...182,440,707
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G
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Sugt1
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SGT1 homolog, MIS12 kinetochore complex assembly cochaperone
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involved_in acts_upstream_of_or_within
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ISO IEA ISS
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(PMID:15133482), (PMID:20404110) GO_REF:0000107 (PMID:32483152) GO_REF:0000024
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RGD Ensembl UniProt |
PMID:15133482 PMID:20404110 PMID:32483152 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr15:54,991,419...55,032,244
Ensembl chr15:54,990,672...55,069,150
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G
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Mcmdc2
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minichromosome maintenance domain containing 2
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acts_upstream_of_or_within
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ISO
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MGI:2178050|MGI:5511194 (PMID:27760146)
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RGD |
PMID:27760146 |
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NCBI chr 5:9,291,967...9,337,526
Ensembl chr 5:9,298,101...9,338,300
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G
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Rad51c
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RAD51 paralog C
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involved_in
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IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr10:72,702,299...72,728,980
Ensembl chr10:72,205,032...72,231,248
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G
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Mcmdc2
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minichromosome maintenance domain containing 2
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acts_upstream_of_or_within
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ISO
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MGI:2178050|MGI:5511194 (PMID:27760146)
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RGD |
PMID:27760146 |
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NCBI chr 5:9,291,967...9,337,526
Ensembl chr 5:9,298,101...9,338,300
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G
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Hmgb1
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high mobility group box 1
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involved_in
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ISO
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(PMID:8006019)
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RGD |
PMID:8006019 |
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NCBI chr12:11,009,236...11,015,941
Ensembl chr12:5,901,586...5,978,565 Ensembl chr16:5,901,586...5,978,565
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G
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Thra
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thyroid hormone receptor alpha
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involved_in
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ISO IEA
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(PMID:8524305) GO_REF:0000107
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RGD Ensembl |
PMID:8524305 |
GO_REF:0000107 |
NCBI chr10:84,198,141...84,225,659
Ensembl chr10:83,700,755...83,729,936
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G
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Zfp827
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zinc finger protein 827
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involved_in
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ISO IEA
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(PMID:25150861) GO_REF:0000107
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RGD Ensembl |
PMID:25150861 |
GO_REF:0000107 |
NCBI chr19:28,720,568...28,887,381
Ensembl chr19:28,721,021...28,887,191
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G
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Anp32b
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acidic nuclear phosphoprotein 32 family member B
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involved_in
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ISO
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(PMID:20538007)
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RGD |
PMID:20538007 |
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NCBI chr 5:65,538,872...65,561,305
Ensembl chr 5:60,743,443...60,765,717
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G
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Asf1a
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anti-silencing function 1A histone chaperone
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acts_upstream_of_or_within involved_in
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ISO
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(PMID:11897662) (PMID:14718166)
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RGD |
PMID:11897662 PMID:14718166 |
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NCBI chr20:32,893,962...32,908,808
Ensembl chr20:32,893,573...32,908,808
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G
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Asf1b
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anti-silencing function 1B histone chaperone
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involved_in acts_upstream_of_or_within
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ISO IEA
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(PMID:14718166) GO_REF:0000107 (PMID:12842904)
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RGD Ensembl |
PMID:12842904 PMID:14718166 |
GO_REF:0000107 |
NCBI chr19:41,085,786...41,100,352
Ensembl chr19:24,181,028...24,195,549
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G
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Atad2
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ATPase family, AAA domain containing 2
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involved_in
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IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr 7:89,634,123...89,676,738
Ensembl chr 7:89,634,123...89,676,738
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G
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Atad2b
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ATPase family, AAA domain containing 2B
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involved_in
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IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr 6:27,914,546...28,070,103
Ensembl chr 6:27,912,862...28,067,047
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G
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Atrx
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ATRX, chromatin remodeler
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involved_in
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ISO IEA ISS
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(PMID:20651253) GO_REF:0000107 GO_REF:0000024
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RGD Ensembl UniProt |
PMID:20651253 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr X:74,916,548...75,062,880
Ensembl chr X:70,850,981...70,997,330
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G
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Baz1a
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bromodomain adjacent to zinc finger domain, 1A
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involved_in
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ISO IEA
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(PMID:14759371) GO_REF:0000107
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RGD Ensembl |
PMID:14759371 |
GO_REF:0000107 |
NCBI chr 6:72,389,701...72,512,516
Ensembl chr 6:72,389,703...72,512,459
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G
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Brd2
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bromodomain containing 2
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involved_in
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ISO IEA ISS
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(PMID:18406326) GO_REF:0000107 GO_REF:0000024
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RGD Ensembl UniProt |
PMID:18406326 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr20:4,728,282...4,737,286
Ensembl chr20:4,728,151...4,735,388
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G
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Cabin1
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calcineurin binding protein 1
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involved_in
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ISO
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(PMID:14718166)
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RGD |
PMID:14718166 |
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NCBI chr20:12,893,314...13,015,357
Ensembl chr20:12,893,358...13,015,357
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G
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Chaf1a
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chromatin assembly factor 1 subunit A
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involved_in
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ISO IBA
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(PMID:14718166) GO_REF:0000033
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RGD GO_Central |
PMID:14718166 |
GO_REF:0000033 |
NCBI chr 9:961,225...987,825
Ensembl chr 9:874,051...900,654
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G
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Chaf1b
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chromatin assembly factor 1 subunit B
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involved_in
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ISO IEA IBA
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(PMID:14718166) GO_REF:0000107 GO_REF:0000033
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RGD Ensembl GO_Central |
PMID:14718166 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr11:33,200,894...33,221,076
Ensembl chr11:33,200,981...33,221,070
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G
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Chrac1
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chromatin accessibility complex subunit 1
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involved_in
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ISO
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(PMID:14759371)
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RGD |
PMID:14759371 |
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NCBI chr 7:105,013,047...105,016,435
Ensembl chr 7:105,013,015...105,017,136
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G
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Daxx
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death-domain associated protein
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involved_in
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ISO IBA IEA
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(PMID:20504901), (PMID:20651253) (PMID:20651253) GO_REF:0000033 GO_REF:0000107
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RGD GO_Central Ensembl |
PMID:20504901 PMID:20651253 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr20:4,971,973...4,978,062
Ensembl chr20:4,970,092...4,975,843
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G
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Dnajc9
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DnaJ heat shock protein family (Hsp40) member C9
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involved_in
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ISO
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(PMID:33857403)
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RGD |
PMID:33857403 |
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NCBI chr15:3,970,843...4,003,009
Ensembl chr15:3,923,268...3,928,118
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G
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Grwd1
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glutamate-rich WD repeat containing 1
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involved_in
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ISO ISS IEA
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(PMID:25990725), (PMID:27552915) GO_REF:0000024 GO_REF:0000107
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RGD UniProt Ensembl |
PMID:25990725 PMID:27552915 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 1:96,301,260...96,306,962
Ensembl chr 1:96,301,261...96,307,201
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G
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H1f0
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H1.0 linker histone
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involved_in
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IEA
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GO_REF:0000002
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InterPro |
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GO_REF:0000002 |
NCBI chr 7:112,473,280...112,475,140
Ensembl chr 7:110,592,208...110,594,694
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G
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H1f1
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H1.1 linker histone, cluster member
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involved_in
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IEA
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GO_REF:0000002
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InterPro |
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GO_REF:0000002 |
NCBI chr17:41,366,268...41,367,011
Ensembl chr17:41,366,268...41,367,011
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G
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H1f10
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H1.10 linker histone
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involved_in
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IEA
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GO_REF:0000002
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InterPro |
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GO_REF:0000002 |
NCBI chr 4:120,440,515...120,441,578
Ensembl chr 4:120,440,870...120,441,448
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G
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H1f2
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H1.2 linker histone, cluster member
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involved_in
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IEA
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GO_REF:0000002
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InterPro |
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GO_REF:0000002 |
NCBI chr17:41,391,106...41,392,597
Ensembl chr17:41,388,477...41,392,635
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G
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H1f4
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H1.4 linker histone, cluster member
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involved_in
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IEA
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GO_REF:0000002
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InterPro |
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GO_REF:0000002 |
NCBI chr17:41,486,574...41,487,355
Ensembl chr17:41,486,560...41,487,403
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G
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H1f5
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H1.5 linker histone, cluster member
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involved_in
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IEA
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GO_REF:0000002
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InterPro |
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GO_REF:0000002 |
NCBI chr17:42,726,132...42,727,162
Ensembl chr17:42,726,127...42,769,160
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G
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H1f6
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H1.6 linker histone, cluster member
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involved_in
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IEA
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GO_REF:0000002
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InterPro |
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GO_REF:0000002 |
NCBI chr17:41,427,365...41,428,109
Ensembl chr17:41,427,323...41,428,119
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G
|
H1f8
|
H1.8 linker histone
|
involved_in
|
IEA
|
GO_REF:0000002
|
InterPro |
|
GO_REF:0000002 |
NCBI chr 4:148,993,133...148,998,254
Ensembl chr 4:148,993,133...148,998,254
|
|
G
|
H2ab3
|
H2A.B variant histone 3
|
involved_in
|
ISO
|
(PMID:22795134)
|
RGD |
PMID:22795134 |
|
NCBI chr X:82,362,531...82,363,105
Ensembl chr X:82,362,633...82,362,983
|
|
G
|
H2bc1
|
H2B clustered histone 1
|
involved_in acts_upstream_of_or_within
|
ISS IEA ISO
|
GO_REF:0000024 GO_REF:0000107 (PMID:23884607) (PMID:17261847) (PMID:24699735)
|
UniProt Ensembl RGD |
PMID:17261847 PMID:23884607 PMID:24699735 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr17:41,172,041...41,172,510
Ensembl chr17:41,171,903...41,176,782 Ensembl chr17:41,171,903...41,176,782
|
|
G
|
H3c1
|
H3 clustered histone 1
|
involved_in
|
ISO
|
(PMID:14718166), (PMID:20498094), (PMID:21636898), (PMID:24699735), (PMID:25615412)
|
RGD |
PMID:14718166 PMID:20498094 PMID:21636898 PMID:24699735 PMID:25615412 |
|
NCBI chr17:41,368,379...41,368,902
Ensembl chr17:41,368,386...41,368,856 Ensembl chr17:41,368,386...41,368,856 Ensembl chr17:41,368,386...41,368,856 Ensembl chr17:41,368,386...41,368,856
|
|
G
|
H3c13
|
H3 clustered histone 13
|
involved_in
|
ISO
|
(PMID:21636898), (PMID:25615412)
|
RGD |
PMID:21636898 PMID:25615412 |
|
NCBI chr17:41,531,502...41,531,971
Ensembl chr 2:183,795,504...183,809,469 Ensembl chr17:183,795,504...183,809,469 Ensembl chr 2:183,795,504...183,809,469 Ensembl chr17:183,795,504...183,809,469 Ensembl chr17:183,795,504...183,809,469 Ensembl chr 2:183,795,504...183,809,469
|
|
G
|
H3f3a
|
H3.3 histone A
|
involved_in
|
ISO
|
(PMID:21636898), (PMID:25615412)
|
RGD |
PMID:21636898 PMID:25615412 |
|
NCBI chr13:92,533,289...92,544,902
Ensembl chr13:92,533,298...92,544,908
|
|
G
|
H3f3b
|
H3.3 histone B
|
involved_in
|
ISO
|
(PMID:21636898), (PMID:25615412)
|
RGD |
PMID:21636898 PMID:25615412 |
|
NCBI chr10:101,256,484...101,258,716
Ensembl chr10:101,256,480...101,258,709 Ensembl chr13:101,256,480...101,258,709
|
|
G
|
H3f4
|
H3.4 histone, cluster member
|
involved_in
|
ISO
|
(PMID:20498094), (PMID:25615412)
|
RGD |
PMID:20498094 PMID:25615412 |
|
NCBI chr10:43,740,702...43,741,262
|
|
G
|
H4c14
|
H4 clustered histone 14
|
involved_in
|
ISO IBA
|
(PMID:14718166), (PMID:20498094), (PMID:21636898), (PMID:24699735), (PMID:25615412) GO_REF:0000033
|
RGD GO_Central |
PMID:14718166 PMID:20498094 PMID:21636898 PMID:24699735 PMID:25615412 |
GO_REF:0000033 |
NCBI chr 2:186,520,468...186,520,863
Ensembl chr 2:183,825,994...183,832,048
|
|
G
|
H4cl1
|
histone H4C like 1
|
involved_in
|
ISO
|
(PMID:14718166), (PMID:20498094), (PMID:21636898), (PMID:24699735), (PMID:25615412)
|
RGD |
PMID:14718166 PMID:20498094 PMID:21636898 PMID:24699735 PMID:25615412 |
|
NCBI chr17:41,796,600...41,860,389
|
|
G
|
H4f3
|
H1.3 linker histone, cluster member
|
involved_in
|
IEA
|
GO_REF:0000002
|
InterPro |
|
GO_REF:0000002 |
NCBI chr17:41,551,524...41,552,303
Ensembl chr17:41,529,667...41,552,334
|
|
G
|
Hat1
|
histone acetyltransferase 1
|
involved_in
|
ISO IEA
|
(PMID:14718166) GO_REF:0000107
|
RGD Ensembl |
PMID:14718166 |
GO_REF:0000107 |
NCBI chr 3:56,217,344...56,265,021
Ensembl chr 3:56,217,342...56,275,517
|
|
G
|
Hils1
|
histone linker H1 domain, spermatid-specific 1
|
involved_in
|
IEA
|
GO_REF:0000002
|
InterPro |
|
GO_REF:0000002 |
NCBI chr10:79,913,525...79,914,321
Ensembl chr10:79,913,480...79,914,321
|
|
G
|
Hira
|
histone cell cycle regulator
|
involved_in
|
ISO
|
(PMID:14718166)
|
RGD |
PMID:14718166 |
|
NCBI chr11:95,528,831...95,637,565
Ensembl chr11:82,024,469...82,133,529
|
|
G
|
Hist1h2ail1
|
histone cluster 1 H2a family member I like 1
|
involved_in
|
ISO
|
(PMID:14718166), (PMID:20498094), (PMID:21636898), (PMID:24699735), (PMID:25615412)
|
RGD |
PMID:14718166 PMID:20498094 PMID:21636898 PMID:24699735 PMID:25615412 |
|
NCBI chr17:41,568,181...41,569,093
Ensembl chr17:41,568,471...41,569,109
|
|
G
|
Hist1h2ao
|
histone cluster 1, H2ao
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr17:42,704,740...42,705,130
Ensembl chr17:42,698,025...42,698,958 Ensembl chr17:42,698,025...42,698,958 Ensembl chr17:42,698,025...42,698,958 Ensembl chr17:42,698,025...42,698,958 Ensembl chr17:42,698,025...42,698,958 Ensembl chr17:42,698,025...42,698,958 Ensembl chr17:42,698,025...42,698,958 Ensembl chr 2:42,698,025...42,698,958 Ensembl chr 4:42,698,025...42,698,958
|
|
G
|
Hist1h4b
|
histone cluster 1 H4 family member B
|
involved_in
|
ISO IBA
|
(PMID:14718166), (PMID:20498094), (PMID:21636898), (PMID:24699735), (PMID:25615412) GO_REF:0000033
|
RGD GO_Central |
PMID:14718166 PMID:20498094 PMID:21636898 PMID:24699735 PMID:25615412 |
GO_REF:0000033 |
NCBI chr17:47,176,246...47,180,690
Ensembl chr17:42,480,313...42,485,370
|
|
G
|
Hist1h4m
|
histone cluster 1, H4m
|
involved_in
|
ISO IBA
|
(PMID:14718166), (PMID:20498094), (PMID:21636898), (PMID:24699735), (PMID:25615412) GO_REF:0000033
|
RGD GO_Central |
PMID:14718166 PMID:20498094 PMID:21636898 PMID:24699735 PMID:25615412 |
GO_REF:0000033 |
NCBI chr17:47,393,764...47,394,168
Ensembl chr17:42,698,025...42,698,958
|
|
G
|
Hist2h3c2
|
histone cluster 2 H3 family member C2
|
involved_in
|
ISO
|
(PMID:21636898), (PMID:25615412)
|
RGD |
PMID:21636898 PMID:25615412 |
|
NCBI chr 2:183,837,296...183,837,721
Ensembl chr 2:183,837,303...183,837,752
|
|
G
|
Hmgb1
|
high mobility group box 1
|
involved_in
|
ISO
|
(PMID:2465778)
|
RGD |
PMID:2465778 |
|
NCBI chr12:11,009,236...11,015,941
Ensembl chr12:5,901,586...5,978,565 Ensembl chr16:5,901,586...5,978,565
|
|
G
|
Hmgb2
|
high mobility group box 2
|
involved_in
|
ISO
|
(PMID:2465778)
|
RGD |
PMID:2465778 |
|
NCBI chr16:32,710,651...32,713,230
Ensembl chr16:32,710,658...32,713,140 Ensembl chr 1:32,710,658...32,713,140
|
|
G
|
Hp1bp3
|
heterochromatin protein 1, binding protein 3
|
involved_in
|
IEA
|
GO_REF:0000002
|
InterPro |
|
GO_REF:0000002 |
NCBI chr 5:150,435,781...150,463,004
Ensembl chr 5:150,433,740...150,463,000
|
|
G
|
Kat6a
|
lysine acetyltransferase 6A
|
involved_in
|
IEA
|
GO_REF:0000002
|
InterPro |
|
GO_REF:0000002 |
NCBI chr16:75,787,411...75,868,584
Ensembl chr16:69,084,914...69,163,606
|
|
G
|
Kat6b
|
lysine acetyltransferase 6B
|
involved_in
|
IEA
|
GO_REF:0000002
|
InterPro |
|
GO_REF:0000002 |
NCBI chr15:2,688,535...2,861,443
Ensembl chr15:2,639,200...2,812,316
|
|
G
|
LOC125610325
|
histone H4
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
|
|
G
|
LOC317165
|
similar to Set alpha isoform
|
involved_in
|
IEA
|
GO_REF:0000002
|
InterPro |
|
GO_REF:0000002 |
Ensembl chr18:39,589,341...39,596,429
|
|
G
|
Macroh2a1
|
macroH2A.1 histone
|
involved_in
|
IEA
|
GO_REF:0000104 GO_REF:0000002
|
UniProt InterPro |
|
GO_REF:0000002 GO_REF:0000104 |
NCBI chr17:8,484,340...8,547,268
Ensembl chr17:8,479,372...8,542,072
|
|
G
|
Macroh2a2
|
macroH2A.2 histone
|
involved_in
|
IEA
|
GO_REF:0000104 GO_REF:0000002
|
UniProt InterPro |
|
GO_REF:0000002 GO_REF:0000104 |
NCBI chr20:29,678,194...29,727,867
Ensembl chr20:29,678,222...29,727,891
|
|
G
|
Mcm2
|
minichromosome maintenance complex component 2
|
acts_upstream_of_or_within
|
ISO IEA
|
(PMID:11568184) GO_REF:0000107
|
RGD Ensembl |
PMID:11568184 |
GO_REF:0000107 |
NCBI chr 4:122,903,679...122,918,205
Ensembl chr 4:121,346,434...121,360,847
|
|
G
|
Naa60
|
N(alpha)-acetyltransferase 60, NatF catalytic subunit
|
involved_in
|
ISS ISO
|
GO_REF:0000024 (PMID:21981917)
|
UniProt RGD |
PMID:21981917 |
GO_REF:0000024 |
NCBI chr10:11,622,554...11,653,078
Ensembl chr10:11,587,916...11,642,755
|
|
G
|
Nap1l1
|
nucleosome assembly protein 1-like 1
|
involved_in
|
IEA IBA
|
GO_REF:0000002 GO_REF:0000033
|
InterPro GO_Central |
|
GO_REF:0000002 GO_REF:0000033 |
NCBI chr 7:46,933,278...46,957,853
Ensembl chr 7:46,933,356...46,956,593
|
|
G
|
Nap1l2
|
nucleosome assembly protein 1-like 2
|
involved_in
|
IEA
|
GO_REF:0000002
|
InterPro |
|
GO_REF:0000002 |
NCBI chr X:68,174,051...68,176,449
Ensembl chr X:68,173,987...68,176,666
|
|
G
|
Nap1l3
|
nucleosome assembly protein 1-like 3
|
involved_in
|
IBA IEA
|
GO_REF:0000033 GO_REF:0000002
|
GO_Central InterPro |
|
GO_REF:0000002 GO_REF:0000033 |
NCBI chr X:88,347,595...88,350,393
Ensembl chr X:88,347,598...88,350,393
|
|
G
|
Nap1l4
|
nucleosome assembly protein 1-like 4
|
involved_in
|
ISO IBA IEA ISS
|
(PMID:9325046) GO_REF:0000033 (PMID:28366643) GO_REF:0000002 GO_REF:0000107 GO_REF:0000024
|
RGD GO_Central InterPro Ensembl UniProt |
PMID:9325046 PMID:28366643 |
GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 |
NCBI chr 1:198,709,697...198,746,093
Ensembl chr 1:198,709,701...198,746,020
|
|
G
|
Nap1l5
|
nucleosome assembly protein 1-like 5
|
involved_in
|
IEA
|
GO_REF:0000002
|
InterPro |
|
GO_REF:0000002 |
NCBI chr 4:88,022,670...88,024,988
Ensembl chr 4:88,022,569...88,024,654
|
|
G
|
Nap1l6
|
nucleosome assembly protein 1 like 6
|
involved_in
|
IBA IEA
|
GO_REF:0000033 GO_REF:0000002
|
GO_Central InterPro |
|
GO_REF:0000002 GO_REF:0000033 |
NCBI chr 7:118,084,674...118,085,850
Ensembl chr 7:118,084,696...118,085,850
|
|
G
|
Nasp
|
nuclear autoantigenic sperm protein
|
involved_in
|
ISO IEA
|
(PMID:25615412) GO_REF:0000107 (PMID:14718166)
|
RGD Ensembl |
PMID:14718166 PMID:25615412 |
GO_REF:0000107 |
NCBI chr 5:130,057,363...130,083,003
Ensembl chr 5:130,057,363...130,082,928
|
|
G
|
Npm1
|
nucleophosmin 1
|
involved_in
|
ISO
|
(PMID:11602260)
|
RGD |
PMID:11602260 |
|
NCBI chr10:18,245,739...18,255,913
Ensembl chr10:17,739,941...17,751,645 Ensembl chr X:17,739,941...17,751,645
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|
G
|
Padi4
|
peptidyl arginine deiminase 4
|
involved_in
|
ISS ISO
|
GO_REF:0000024 (PMID:24463520)
|
UniProt RGD |
PMID:24463520 |
GO_REF:0000024 |
NCBI chr 5:153,041,351...153,074,412
Ensembl chr 5:153,041,352...153,074,362
|
|
G
|
Pkn3
|
protein kinase N3
|
involved_in
|
IEA
|
GO_REF:0000002
|
InterPro |
|
GO_REF:0000002 |
NCBI chr 3:33,747,610...33,761,405
Ensembl chr 3:13,335,041...13,363,567
|
|
G
|
Pole3
|
DNA polymerase epsilon 3, accessory subunit
|
involved_in
|
ISO
|
(PMID:14759371)
|
RGD |
PMID:14759371 |
|
NCBI chr 5:75,973,941...75,977,175
Ensembl chr 5:75,974,717...75,977,231 Ensembl chr 7:75,974,717...75,977,231
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|
G
|
Rbbp4
|
RB binding protein 4, chromatin remodeling factor
|
involved_in
|
ISO
|
(PMID:14718166)
|
RGD |
PMID:14718166 |
|
NCBI chr 5:146,940,207...146,959,501
Ensembl chr 5:141,638,421...141,675,284 Ensembl chr 2:141,638,421...141,675,284
|
|
G
|
Rsf1
|
remodeling and spacing factor 1
|
involved_in
|
ISO IEA
|
(PMID:11691835), (PMID:12972596) GO_REF:0000107
|
RGD Ensembl |
PMID:11691835 PMID:12972596 |
GO_REF:0000107 |
NCBI chr 1:151,892,055...152,015,089
Ensembl chr 1:151,892,434...152,009,051
|
|
G
|
Sart3
|
spliceosome associated factor 3, U4/U6 recycling protein
|
involved_in
|
ISO IEA
|
(PMID:24526689) GO_REF:0000107
|
RGD Ensembl |
PMID:24526689 |
GO_REF:0000107 |
NCBI chr12:42,859,026...42,887,041
Ensembl chr12:42,859,305...42,887,038
|
|
G
|
Set
|
Set nuclear proto-oncogene
|
involved_in
|
IEA
|
GO_REF:0000002
|
InterPro |
|
GO_REF:0000002 |
NCBI chr 3:13,334,564...13,345,598
Ensembl chr 3:13,335,041...13,363,567
|
|
G
|
Setl2
|
SET-like protein 2
|
involved_in
|
IEA
|
GO_REF:0000002
|
InterPro |
|
GO_REF:0000002 |
NCBI chr 1:86,449,482...86,450,302
Ensembl chr X:119,908,942...119,909,886 Ensembl chr 1:119,908,942...119,909,886
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|
G
|
Setsip
|
SET like protein
|
involved_in
|
IEA
|
GO_REF:0000002
|
InterPro |
|
GO_REF:0000002 |
NCBI chr19:53,561,262...53,562,780
Ensembl chr19:53,561,190...53,563,819
|
|
G
|
Shprh
|
SNF2 histone linker PHD RING helicase
|
involved_in
|
IEA
|
GO_REF:0000002
|
InterPro |
|
GO_REF:0000002 |
NCBI chr 1:5,528,827...5,602,537
Ensembl chr 1:5,528,888...5,602,527
|
|
G
|
Smarca5
|
SNF2 related chromatin remodeling ATPase 5
|
involved_in
|
ISO IEA
|
(PMID:11691835), (PMID:12972596), (PMID:14759371) GO_REF:0000107
|
RGD Ensembl |
PMID:11691835 PMID:12972596 PMID:14759371 |
GO_REF:0000107 |
NCBI chr19:27,271,918...27,304,594
Ensembl chr19:27,271,148...27,304,594
|
|
G
|
Smyd3
|
SET and MYND domain containing 3
|
acts_upstream_of_or_within
|
ISO IEA
|
(PMID:23752591) GO_REF:0000107
|
RGD Ensembl |
PMID:23752591 |
GO_REF:0000107 |
NCBI chr13:90,709,263...91,266,209
Ensembl chr13:90,709,270...91,266,253
|
|
G
|
Sox9
|
SRY-box transcription factor 9
|
involved_in
|
ISO IEA ISS
|
(PMID:20484372) GO_REF:0000107 GO_REF:0000024
|
RGD Ensembl UniProt |
PMID:20484372 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
|
|
G
|
Spty2d1
|
SPT2 chromatin protein domain containing 1
|
involved_in
|
ISO IEA IBA
|
(PMID:23378026) GO_REF:0000107 GO_REF:0000033
|
RGD Ensembl GO_Central |
PMID:23378026 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 1:97,531,495...97,549,616
Ensembl chr 1:97,531,508...97,549,581
|
|
G
|
Tspy1
|
testis specific protein, Y-linked 1
|
involved_in
|
IEA
|
GO_REF:0000002
|
InterPro |
|
GO_REF:0000002 |
|
|
G
|
Tspy26
|
testis specific protein, Y-linked 26
|
involved_in
|
IEA
|
GO_REF:0000002
|
InterPro |
|
GO_REF:0000002 |
NCBI chr 3:141,690,653...141,692,729
Ensembl chr 3:141,689,899...141,692,670
|
|
G
|
Tspyl2
|
TSPY-like 2
|
involved_in
|
IEA
|
GO_REF:0000002
|
InterPro |
|
GO_REF:0000002 |
NCBI chr X:21,439,478...21,445,208
Ensembl chr X:21,439,478...21,445,089
|
|
G
|
Tspyl4
|
TSPY-like 4
|
involved_in
|
IEA
|
GO_REF:0000002
|
InterPro |
|
GO_REF:0000002 |
NCBI chr20:38,098,756...38,100,752
Ensembl chr20:38,098,677...38,103,053
|
|
G
|
Tspyl5
|
TSPY-like 5
|
involved_in
|
IEA
|
GO_REF:0000002
|
InterPro |
|
GO_REF:0000002 |
NCBI chr 7:64,881,504...64,885,512
Ensembl chr 7:64,884,225...64,885,457
|
|
G
|
Ubn1
|
ubinuclein 1
|
involved_in
|
ISO IEA
|
(PMID:14718166) GO_REF:0000107
|
RGD Ensembl |
PMID:14718166 |
GO_REF:0000107 |
NCBI chr10:10,496,576...10,532,010
Ensembl chr10:10,496,576...10,532,010
|
|
|
G
|
Gtf2h5
|
general transcription factor IIH subunit 5
|
involved_in acts_upstream_of_or_within
|
IBA ISO
|
GO_REF:0000033 MGI:5514340 (PMID:23637614)
|
GO_Central RGD |
PMID:23637614 |
GO_REF:0000033 |
NCBI chr 1:46,656,804...46,663,512
Ensembl chr 1:46,656,859...46,664,939
|
|
G
|
LOC120103497
|
general transcription factor IIH subunit 5-like
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 6:27,109,209...27,114,478
Ensembl chr 6:27,111,331...27,111,546
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G
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Ahr
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aryl hydrocarbon receptor
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acts_upstream_of_or_within
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ISO
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(PMID:8215422)
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RGD |
PMID:8215422 |
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NCBI chr 6:57,961,423...57,998,901
Ensembl chr 6:52,234,089...52,271,568
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G
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Cand1
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cullin-associated and neddylation-dissociated 1
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involved_in
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IDA
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PMID:10567521
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UniProt |
PMID:10567521 |
RGD:8553447 |
NCBI chr 7:54,681,114...54,719,002
Ensembl chr 7:54,680,900...54,718,993
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G
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Creb1
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cAMP responsive element binding protein 1
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IMP
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RGD |
PMID:16891311 |
RGD:1625706 |
NCBI chr 9:73,397,333...73,466,339
Ensembl chr 9:65,903,547...65,970,816
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G
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Ikzf1
|
IKAROS family zinc finger 1
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acts_upstream_of_or_within
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ISO
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MGI:2158690 (PMID:21245044)
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RGD |
PMID:21245044 |
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NCBI chr14:90,468,696...90,556,522
Ensembl chr14:86,255,065...86,342,416
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G
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Tp53
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tumor protein p53
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involved_in
|
ISO IEA
|
(PMID:24289924) GO_REF:0000107
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RGD Ensembl |
PMID:24289924 |
GO_REF:0000107 |
NCBI chr10:54,798,871...54,810,300
Ensembl chr10:54,300,048...54,311,524
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G
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Wnt10b
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Wnt family member 10B
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acts_upstream_of_or_within
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ISO IEA
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(PMID:19056892) GO_REF:0000107
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RGD Ensembl |
PMID:19056892 |
GO_REF:0000107 |
NCBI chr 7:131,801,046...131,806,850
Ensembl chr 7:129,922,088...129,927,892
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G
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Terf1
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telomeric repeat binding factor 1
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involved_in
|
ISO IEA
|
(PMID:24270157) GO_REF:0000107
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RGD Ensembl |
PMID:24270157 |
GO_REF:0000107 |
NCBI chr 5:8,226,345...8,255,614
Ensembl chr 5:3,443,106...3,472,340
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G
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Kntc1
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kinetochore associated 1
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involved_in
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IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr12:38,429,925...38,500,564
Ensembl chr12:32,769,020...32,839,561
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G
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H3f3b
|
H3.3 histone B
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acts_upstream_of_or_within
|
ISO
|
MGI:5474462 (PMID:23570311)
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RGD |
PMID:23570311 |
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NCBI chr10:101,256,484...101,258,716
Ensembl chr10:101,256,480...101,258,709 Ensembl chr13:101,256,480...101,258,709
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G
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Rnf4
|
ring finger protein 4
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involved_in
|
ISO ISS IEA
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(PMID:20212317) GO_REF:0000024 GO_REF:0000107
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RGD UniProt Ensembl |
PMID:20212317 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr14:80,625,864...80,647,138
Ensembl chr14:76,401,299...76,422,566
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G
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Senp6
|
SUMO specific peptidase 6
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involved_in
|
ISO IBA IEA
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(PMID:20212317) GO_REF:0000033 GO_REF:0000107
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RGD GO_Central Ensembl |
PMID:20212317 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 8:80,988,675...81,071,606
Ensembl chr 8:80,989,052...81,067,170
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G
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Trappc12
|
trafficking protein particle complex subunit 12
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involved_in
|
ISO IEA
|
(PMID:25918224) GO_REF:0000107
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RGD Ensembl |
PMID:25918224 |
GO_REF:0000107 |
NCBI chr 6:45,321,496...45,386,967
Ensembl chr 6:45,321,497...45,386,952
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G
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Baz2a
|
bromodomain adjacent to zinc finger domain, 2A
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involved_in
|
IEA
|
GO_REF:0000108
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GOC |
|
GO_REF:0000108 |
NCBI chr 7:523,204...560,911
Ensembl chr 7:523,265...560,659
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G
|
Polr1e
|
RNA polymerase I subunit E
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involved_in acts_upstream_of_or_within
|
IBA IEA ISO
|
GO_REF:0000033 GO_REF:0000107 (PMID:8641287)
|
GO_Central Ensembl RGD |
PMID:8641287 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 5:64,075,123...64,090,900
Ensembl chr 5:59,279,460...59,295,369
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G
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Rrn3
|
RRN3 homolog, RNA polymerase I transcription factor
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involved_in
|
IEA
|
GO_REF:0000108
|
GOC |
|
GO_REF:0000108 |
NCBI chr10:2,129,949...2,165,381
Ensembl chr10:2,129,978...2,165,663
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G
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Smarca4
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SWI/SNF related BAF chromatin remodeling complex subunit ATPase 4
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involved_in
|
IEA
|
GO_REF:0000108
|
GOC |
|
GO_REF:0000108 |
NCBI chr 8:20,167,717...20,258,975
Ensembl chr 8:20,167,717...20,258,975
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G
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Smarcb1
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SWI/SNF related BAF chromatin remodeling complex subunit B1
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involved_in
|
IEA
|
GO_REF:0000108
|
GOC |
|
GO_REF:0000108 |
NCBI chr20:12,741,164...12,763,616
Ensembl chr20:12,741,477...12,763,620
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|
G
|
Taf1b
|
TATA-box binding protein associated factor, RNA polymerase I subunit B
|
involved_in
|
ISO IEA ISS
|
(PMID:21921199) GO_REF:0000002 GO_REF:0000107 GO_REF:0000024
|
RGD InterPro Ensembl UniProt |
PMID:21921199 |
GO_REF:0000002 GO_REF:0000024 GO_REF:0000107 |
NCBI chr 6:41,116,980...41,194,593
Ensembl chr 6:41,117,420...41,194,593
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|
G
|
Taf1c
|
TATA-box binding protein associated factor, RNA polymerase 1 subunit C
|
involved_in
|
IEA
|
GO_REF:0000108
|
GOC |
|
GO_REF:0000108 |
NCBI chr19:47,652,451...47,658,971
Ensembl chr19:47,652,452...47,658,971
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G
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Tbp
|
TATA box binding protein
|
involved_in
|
IEA
|
GO_REF:0000108
|
GOC |
|
GO_REF:0000108 |
NCBI chr 1:56,463,330...56,480,430
Ensembl chr 1:56,463,618...56,510,016
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G
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Ubtf
|
upstream binding transcription factor
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involved_in
|
IEA
|
GO_REF:0000108
|
GOC |
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GO_REF:0000108 |
NCBI chr10:87,258,217...87,274,291
Ensembl chr10:87,258,217...87,272,969
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G
|
Ubtfl2
|
upstream binding transcription factor like 2
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involved_in
|
IEA
|
GO_REF:0000108
|
GOC |
|
GO_REF:0000108 |
NCBI chr 8:16,073,983...16,075,170
Ensembl chr 8:16,073,983...16,075,170
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G
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Dr1
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down-regulator of transcription 1
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involved_in
|
IBA
|
GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr14:1,458,223...1,469,578
Ensembl chr14:1,458,223...1,469,638
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G
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ENSRNOG00000064241
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involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
Ensembl chr 5:97,975,779...97,977,813
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G
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Esr1
|
estrogen receptor 1
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involved_in
|
IEA ISO
|
GO_REF:0000107 (PMID:9841876)
|
Ensembl RGD |
PMID:9841876 |
GO_REF:0000107 |
NCBI chr 1:43,511,685...43,904,454
Ensembl chr 1:41,210,475...41,495,002
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G
|
Gtf2a2
|
general transcription factor 2A subunit 2
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involved_in
|
ISO IBA
|
(PMID:7958899), (PMID:8626665) GO_REF:0000033
|
RGD GO_Central |
PMID:7958899 PMID:8626665 |
GO_REF:0000033 |
NCBI chr 8:70,662,447...70,675,576
Ensembl chr 8:70,662,428...70,675,569
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|
G
|
Gtf2b
|
general transcription factor IIB
|
involved_in
|
IEA IBA ISS ISO
|
GO_REF:0000107 GO_REF:0000033 GO_REF:0000024 (PMID:3029109), (PMID:8413225), (PMID:9841876)
|
Ensembl GO_Central UniProt RGD |
PMID:3029109 PMID:8413225 PMID:9841876 |
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 |
NCBI chr 2:231,767,317...231,785,626
Ensembl chr 2:231,767,238...231,785,651
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G
|
Gtf2f2
|
general transcription factor IIF subunit 2
|
|
IDA
|
|
RGD |
PMID:7929273 |
RGD:9681417 |
NCBI chr15:51,206,027...51,327,166
Ensembl chr15:51,206,031...51,327,253
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G
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Slc25a2
|
solute carrier family 25 member 2
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involved_in
|
IEA
|
GO_REF:0000107
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr18:29,452,943...29,456,324
Ensembl chr18:29,453,582...29,460,383
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G
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Taf1
|
TATA-box binding protein associated factor 1
|
involved_in
|
ISO IBA
|
(PMID:27007846) GO_REF:0000033
|
RGD GO_Central |
PMID:27007846 |
GO_REF:0000033 |
NCBI chr X:70,680,901...70,756,535
Ensembl chr X:66,640,982...66,716,543
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|
G
|
Taf10
|
TATA-box binding protein associated factor 10
|
involved_in
|
ISO IEA
|
(PMID:27007846) GO_REF:0000107 MGI:3606185 (PMID:28893950)
|
RGD Ensembl |
PMID:27007846 PMID:28893950 |
GO_REF:0000107 |
NCBI chr 1:160,095,108...160,096,401
Ensembl chr 1:160,095,108...160,096,376
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|
G
|
Taf11
|
TATA-box binding protein associated factor 11
|
involved_in
|
ISO IBA IEA
|
(PMID:27007846) GO_REF:0000033 GO_REF:0000002
|
RGD GO_Central InterPro |
PMID:27007846 |
GO_REF:0000002 GO_REF:0000033 |
NCBI chr20:5,955,774...5,963,593
Ensembl chr20:5,955,777...5,961,905
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G
|
Taf11l1
|
TATA-box binding protein associated factor 11 like 1
|
involved_in
|
IBA IEA
|
GO_REF:0000033 GO_REF:0000002
|
GO_Central InterPro |
|
GO_REF:0000002 GO_REF:0000033 |
NCBI chr10:73,781,281...73,783,163
Ensembl chr10:73,781,269...73,782,563
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|
G
|
Taf12
|
TATA-box binding protein associated factor 12
|
involved_in
|
ISO IEA IBA
|
(PMID:27007846) GO_REF:0000107 GO_REF:0000033
|
RGD Ensembl GO_Central |
PMID:27007846 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 5:144,472,816...144,490,299
Ensembl chr 5:144,472,841...144,488,849
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|
G
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Taf13
|
TATA-box binding protein associated factor 13
|
involved_in
|
ISO
|
(PMID:27007846)
|
RGD |
PMID:27007846 |
|
NCBI chr 2:196,205,219...196,215,882
Ensembl chr 2:196,205,243...196,215,878
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|
G
|
Taf2
|
TATA-box binding protein associated factor 2
|
involved_in
|
ISO IEA
|
(PMID:27007846) GO_REF:0000107
|
RGD Ensembl |
PMID:27007846 |
GO_REF:0000107 |
NCBI chr 7:86,422,613...86,479,616
Ensembl chr 7:86,422,613...86,479,616
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|
G
|
Taf3
|
TATA-box binding protein associated factor 3
|
involved_in
|
ISO
|
(PMID:27007846)
|
RGD |
PMID:27007846 |
|
NCBI chr17:68,455,389...68,608,367
Ensembl chr17:68,423,909...68,608,367
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|
G
|
Taf4
|
TATA-box binding protein associated factor 4
|
involved_in
|
ISO IEA
|
(PMID:27007846) GO_REF:0000107
|
RGD Ensembl |
PMID:27007846 |
GO_REF:0000107 |
NCBI chr 3:167,017,992...167,083,413
Ensembl chr 3:167,017,993...167,083,356
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|
G
|
Taf5
|
TATA-box binding protein associated factor 5
|
involved_in
|
ISO IEA
|
(PMID:27007846) GO_REF:0000107
|
RGD Ensembl |
PMID:27007846 |
GO_REF:0000107 |
NCBI chr 1:245,958,428...245,973,914
Ensembl chr 1:245,958,428...245,973,914
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|
G
|
Taf6
|
TATA-box binding protein associated factor 6
|
involved_in
|
ISO IBA IEA
|
(PMID:27007846) GO_REF:0000033 GO_REF:0000107
|
RGD GO_Central Ensembl |
PMID:27007846 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr12:17,055,864...17,064,244
Ensembl chr12:17,055,873...17,064,247
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|
G
|
Taf6l
|
TATA-box binding protein associated factor 6 like
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 1:205,672,147...205,684,721
Ensembl chr 1:205,672,149...205,684,655
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|
G
|
Taf7
|
TATA-box binding protein associated factor 7
|
involved_in
|
ISO IBA
|
(PMID:27007846) GO_REF:0000033
|
RGD GO_Central |
PMID:27007846 |
GO_REF:0000033 |
NCBI chr18:29,459,937...29,462,086
Ensembl chr18:29,452,943...29,462,134
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|
G
|
Taf7l
|
TATA-box binding protein associated factor 7-like
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr X:97,660,222...97,675,241
Ensembl chr X:97,660,222...97,675,023
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|
G
|
Taf7l-ps1
|
TAF7-like RNA polymerase II, TATA box binding protein (TBP)-associated factor, pseudogene 1
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involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 7:51,763,259...51,764,401
Ensembl chr 7:51,763,259...51,764,401
|
|
G
|
Taf8
|
TATA-box binding protein associated factor 8
|
involved_in
|
ISO IEA
|
(PMID:27007846) GO_REF:0000107
|
RGD Ensembl |
PMID:27007846 |
GO_REF:0000107 |
NCBI chr 9:13,491,892...13,511,713
Ensembl chr 9:13,491,937...13,511,717
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|
G
|
Taf8l1
|
TATA-box binding protein associated factor 8 like 1
|
involved_in
|
IEA
|
GO_REF:0000107
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 6:99,293,907...99,295,840
Ensembl chr 6:99,294,126...99,295,052
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|
G
|
Taf9
|
TATA-box binding protein associated factor 9
|
involved_in
|
ISO IBA
|
(PMID:27007846) GO_REF:0000033
|
RGD GO_Central |
PMID:27007846 |
GO_REF:0000033 |
NCBI chr 2:31,794,316...31,798,324
Ensembl chr 2:31,794,142...31,798,769
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G
|
Tbp
|
TATA box binding protein
|
involved_in
|
ISO IEA
|
(PMID:27007846), (PMID:9841876) GO_REF:0000107
|
RGD Ensembl |
PMID:9841876 PMID:27007846 |
GO_REF:0000107 |
NCBI chr 1:56,463,330...56,480,430
Ensembl chr 1:56,463,618...56,510,016
|
|
|
G
|
Bdp1
|
BDP1 general transcription factor IIIB subunit
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 2:31,378,407...31,470,140
Ensembl chr 2:31,378,924...31,470,119
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|
|
G
|
Hmbox1
|
homeobox containing 1
|
involved_in
|
ISO IEA
|
(PMID:23685356) GO_REF:0000107
|
RGD Ensembl |
PMID:23685356 |
GO_REF:0000107 |
NCBI chr15:39,067,805...39,200,633
Ensembl chr15:39,067,804...39,200,323
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|
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G
|
Brf1
|
BRF1 general transcription factor IIIB subunit
|
involved_in
|
IEA
|
GO_REF:0000002
|
InterPro |
|
GO_REF:0000002 |
NCBI chr 6:137,854,055...137,902,629
Ensembl chr 6:132,037,272...132,081,278
|
|
G
|
Brf2
|
BRF2 general transcription factor 3B subunit
|
involved_in
|
IEA
|
GO_REF:0000002
|
InterPro |
|
GO_REF:0000002 |
NCBI chr16:64,928,334...64,933,057
Ensembl chr16:64,928,300...64,933,059
|
|
G
|
Gtf2b
|
general transcription factor IIB
|
involved_in
|
IEA
|
GO_REF:0000002
|
InterPro |
|
GO_REF:0000002 |
NCBI chr 2:231,767,317...231,785,626
Ensembl chr 2:231,767,238...231,785,651
|
|
G
|
Nfkbiz
|
NFKB inhibitor zeta
|
involved_in
|
ISO
|
MGI:3046930 (PMID:18319258)
|
RGD |
PMID:18319258 |
|
NCBI chr11:58,251,720...58,279,767
Ensembl chr11:44,782,676...44,810,723
|
|
Term paths to the root
|