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ONTOLOGY REPORT - ANNOTATIONS

Term:intracellular protein transmembrane transport
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Accession:GO:0065002 term browser browse the term
Definition:The directed movement of proteins in a cell, from one side of a membrane to another by means of some agent such as a transporter or pore.
Comment:Note that this term is not intended for use in annotating lateral movement within membranes.
Synonyms:exact_synonym: intracellular membrane translocation of a protein;   intracellular protein membrane transport;   intracellular protein transport across a membrane


show annotations for term's descendants           Sort by:
intracellular protein transmembrane transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCR BCR activator of RhoGEF and GTPase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7889565) Ensembl
MGI		 PMID:7889565 GO_REF:0000107 NCBI chr14:49,208,662...49,322,109
Ensembl chr14:49,208,762...49,322,103 		JBrowse link
G C2CD5 C2 calcium dependent domain containing 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:51,040,519...51,132,287
Ensembl chr 5:51,040,514...51,132,288 		JBrowse link
G RTN2 reticulon 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19720795) Ensembl
MGI		 PMID:19720795 GO_REF:0000107 NCBI chr 6:51,855,844...51,864,753
Ensembl chr 6:51,854,998...51,875,169 		JBrowse link
post-translational protein targeting to membrane, translocation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLP1R glucagon like peptide 1 receptor acts_upstream_of_or_within ISO (PMID:23542788) MGI PMID:23542788 NCBI chr 7:34,497,779...34,534,356
Ensembl chr 7:34,497,759...34,534,627 		JBrowse link
G HSPA5 heat shock protein family A (Hsp70) member 5 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:265,930,044...265,934,959
Ensembl chr 1:265,930,045...265,934,894 		JBrowse link
G SEC61A1 SEC61 translocon subunit alpha 1 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr13:72,254,462...72,276,484
Ensembl chr13:72,254,464...72,269,914 		JBrowse link
G SEC61A2 SEC61 translocon subunit alpha 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:59,790,073...59,817,039
Ensembl chr10:59,773,852...59,817,010 		JBrowse link
G SEC61B SEC61 translocon subunit beta involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:240,985,173...240,991,820
Ensembl chr 1:240,985,162...240,992,976 		JBrowse link
G SEC61G SEC61 translocon subunit gamma involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:139,128,287...139,135,831
Ensembl chr 9:139,128,296...139,135,727 		JBrowse link
G SEC62 SEC62 homolog, preprotein translocation factor involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr13:108,660,486...108,688,307
Ensembl chr13:108,660,450...108,691,595 		JBrowse link
G SEC63 SEC63 homolog, protein translocation regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:74,003,428...74,078,605
Ensembl chr 1:74,000,688...74,078,582 		JBrowse link
protein import into peroxisome matrix term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LONP2 lon peptidase 2, peroxisomal involved_in IEA UniProt GO_REF:0000104 NCBI chr 6:36,372,596...36,466,185
Ensembl chr 6:36,372,599...36,466,190 		JBrowse link
G PEX1 peroxisomal biogenesis factor 1 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:72,385,755...72,444,718
Ensembl chr 9:72,385,475...72,444,582 		JBrowse link
G PEX10 peroxisomal biogenesis factor 10 involved_in IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 6:64,311,743...64,317,693 JBrowse link
G PEX12 peroxisomal biogenesis factor 12 involved_in IEA
IBA		 Ensembl
GO_Central
UniProt
InterPro		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 NCBI chr12:39,931,680...39,936,632
Ensembl chr12:39,932,010...39,936,268 		JBrowse link
G PEX14 peroxisomal biogenesis factor 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:70,737,871...70,872,074
Ensembl chr 6:70,737,905...70,872,072 		JBrowse link
G PEX16 peroxisomal biogenesis factor 16 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:9922452) MGI
Ensembl		 PMID:9922452 GO_REF:0000107 NCBI chr 2:16,555,045...16,560,777
Ensembl chr 2:16,555,051...16,561,685 		JBrowse link
G PEX2 peroxisomal biogenesis factor 2 involved_in IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chr 4:59,252,330...59,270,117
Ensembl chr 4:59,252,337...59,270,116 		JBrowse link
G PEX26 peroxisomal biogenesis factor 26 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:70,133,024...70,142,515
Ensembl chr 5:70,133,024...70,142,503 		JBrowse link
G PEX5 peroxisomal biogenesis factor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:63,542,422...63,562,762
Ensembl chr 5:63,542,431...63,562,849 		JBrowse link
G PEX7 peroxisomal biogenesis factor 7 acts_upstream_of_or_within
involved_in		 ISO
IBA
IEA		 (PMID:9090381) MGI
GO_Central
Ensembl
InterPro		 PMID:9090381 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:27,257,872...27,346,529
Ensembl chr 1:27,257,011...27,346,515 		JBrowse link
G TRIM37 tripartite motif containing 37 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:28724525) Ensembl
UniProt		 PMID:28724525 GO_REF:0000107 NCBI chr12:35,259,292...35,393,464
Ensembl chr12:35,260,154...35,393,430 		JBrowse link
G TUBA8 tubulin alpha 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:70,154,251...70,174,001
Ensembl chr 5:70,153,922...70,179,970 		JBrowse link
protein import into peroxisome matrix, docking term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PEX13 peroxisomal biogenesis factor 13 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12897163) InterPro
MGI		 PMID:12897163 GO_REF:0000002 NCBI chr 3:80,757,470...80,791,107
Ensembl chr 3:80,753,908...80,791,056 		JBrowse link
G PEX14 peroxisomal biogenesis factor 14 involved_in IEA
IBA		 InterPro
GO_Central
Ensembl
UniProt		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 NCBI chr 6:70,737,871...70,872,074
Ensembl chr 6:70,737,905...70,872,072 		JBrowse link
G PEX5 peroxisomal biogenesis factor 5 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:63,542,422...63,562,762
Ensembl chr 5:63,542,431...63,562,849 		JBrowse link
G PEX5L peroxisomal biogenesis factor 5 like involved_in IBA GO_Central GO_REF:0000033 NCBI chr13:117,832,199...118,088,383
Ensembl chr13:117,833,705...118,088,277 		JBrowse link
protein import into peroxisome matrix, receptor recycling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PEX1 peroxisomal biogenesis factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:72,385,755...72,444,718
Ensembl chr 9:72,385,475...72,444,582 		JBrowse link
G PEX10 peroxisomal biogenesis factor 10 involved_in ISO (PMID:24662292) UniProt PMID:24662292 NCBI chr 6:64,311,743...64,317,693 JBrowse link
G PEX12 peroxisomal biogenesis factor 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:39,931,680...39,936,632
Ensembl chr12:39,932,010...39,936,268 		JBrowse link
G PEX2 peroxisomal biogenesis factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:59,252,330...59,270,117
Ensembl chr 4:59,252,337...59,270,116 		JBrowse link
G PEX5 peroxisomal biogenesis factor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:63,542,422...63,562,762
Ensembl chr 5:63,542,431...63,562,849 		JBrowse link
G PEX6 peroxisomal biogenesis factor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:38,039,852...38,052,384
Ensembl chr 7:38,039,862...38,052,369 		JBrowse link
G USP9X ubiquitin specific peptidase 9 X-linked involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:36,736,049...36,888,702
Ensembl chr  X:36,760,865...36,885,250 		JBrowse link
protein import into peroxisome matrix, substrate release term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PEX14 peroxisomal biogenesis factor 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:70,737,871...70,872,074
Ensembl chr 6:70,737,905...70,872,072 		JBrowse link
G PEX5 peroxisomal biogenesis factor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:63,542,422...63,562,762
Ensembl chr 5:63,542,431...63,562,849 		JBrowse link
protein import into peroxisome matrix, translocation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PEX13 peroxisomal biogenesis factor 13 involved_in ISO (PMID:28765278) UniProt PMID:28765278 NCBI chr 3:80,757,470...80,791,107
Ensembl chr 3:80,753,908...80,791,056 		JBrowse link
G PEX14 peroxisomal biogenesis factor 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:70,737,871...70,872,074
Ensembl chr 6:70,737,905...70,872,072 		JBrowse link
G PEX5 peroxisomal biogenesis factor 5 involved_in ISO (PMID:11336669), (PMID:7719337) UniProt PMID:7719337 PMID:11336669 NCBI chr 5:63,542,422...63,562,762
Ensembl chr 5:63,542,431...63,562,849 		JBrowse link
G PEX6 peroxisomal biogenesis factor 6 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:38,039,852...38,052,384
Ensembl chr 7:38,039,862...38,052,369 		JBrowse link
SRP-dependent cotranslational protein targeting to membrane, translocation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SEC61A1 SEC61 translocon subunit alpha 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr13:72,254,462...72,276,484
Ensembl chr13:72,254,464...72,269,914 		JBrowse link
G SEC61A2 SEC61 translocon subunit alpha 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:59,790,073...59,817,039
Ensembl chr10:59,773,852...59,817,010 		JBrowse link
G SEC61B SEC61 translocon subunit beta involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:240,985,173...240,991,820
Ensembl chr 1:240,985,162...240,992,976 		JBrowse link
G SRP54 signal recognition particle 54 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:64,829,625...64,877,574
Ensembl chr 7:64,829,228...64,877,195 		JBrowse link
G TRAM1 translocation associated membrane protein 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 4:64,768,600...64,800,513
Ensembl chr 4:64,768,698...64,800,508 		JBrowse link
G TRAM1L1 translocation associated membrane protein 1 like 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 8:106,283,197...106,291,187
Ensembl chr 8:106,283,243...106,289,490 		JBrowse link
G TRAM2 translocation associated membrane protein 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 7:46,323,073...46,406,983
Ensembl chr 7:46,323,077...46,361,305 		JBrowse link
G ZFAND2B zinc finger AN1-type containing 2B acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:24160817) MGI
Ensembl		 PMID:24160817 GO_REF:0000107 NCBI chr15:121,243,116...121,246,075
Ensembl chr15:121,243,116...121,246,068 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17634
    cellular process 16614
      transmembrane transport 1627
        protein transmembrane transport 68
          intracellular protein transmembrane transport 32
            SRP-dependent cotranslational protein targeting to membrane, translocation 8
            post-translational protein targeting to membrane, translocation + 8
            protein import into peroxisome matrix + 16
            protein import into peroxisome matrix, translocation 4
Path 2
Term Annotations click to browse term
  biological_process 17634
    localization 5331
      macromolecule localization 2992
        cellular macromolecule localization 2540
          protein localization 2527
            establishment of protein localization 1602
              protein transport 1319
                protein transmembrane transport 68
                  intracellular protein transmembrane transport 32
                    SRP-dependent cotranslational protein targeting to membrane, translocation 8
                    post-translational protein targeting to membrane, translocation + 8
                    protein import into peroxisome matrix + 16
                    protein import into peroxisome matrix, translocation 4
paths to the root