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ONTOLOGY REPORT - ANNOTATIONS

Term:intracellular protein transmembrane transport
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Accession:GO:0065002 term browser browse the term
Definition:The directed movement of proteins in a cell, from one side of a membrane to another by means of some agent such as a transporter or pore.
Comment:Note that this term is not intended for use in annotating lateral movement within membranes.
Synonyms:exact_synonym: intracellular membrane translocation of a protein;   intracellular protein membrane transport;   intracellular protein transport across a membrane

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intracellular protein transmembrane transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcr BCR activator of RhoGEF and GTPase acts_upstream_of_or_within ISO (PMID:7889565) MGI PMID:7889565 NCBI chrNW_004624747:9,528,968...9,664,055
Ensembl chrNW_004624747:9,528,996...9,662,131 		JBrowse link
G C2cd5 C2 calcium dependent domain containing 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624752:16,261,819...16,365,161
Ensembl chrNW_004624752:16,261,775...16,365,320 		JBrowse link
G Rtn2 reticulon 2 acts_upstream_of_or_within ISO (PMID:19720795) MGI PMID:19720795 NCBI chrNW_004624907:2,345,223...2,350,844
Ensembl chrNW_004624907:2,344,134...2,352,199 		JBrowse link
post-translational protein targeting to membrane, translocation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Glp1r glucagon like peptide 1 receptor acts_upstream_of_or_within ISO (PMID:23542788) MGI PMID:23542788 NCBI chrNW_004624754:19,214,547...19,245,030
Ensembl chrNW_004624754:19,215,829...19,244,987 		JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 involved_in ISO (PMID:29719251) UniProt PMID:29719251 NCBI chrNW_004624760:9,986,529...9,991,261
Ensembl chrNW_004624760:9,986,656...9,995,252 		JBrowse link
G Sec61a1 SEC61 translocon subunit alpha 1 involved_in ISO (PMID:29719251) UniProt PMID:29719251 NCBI chrNW_004624961:466,234...477,880
Ensembl chrNW_004624961:467,656...477,884 		JBrowse link
G Sec61a2 SEC61 translocon subunit alpha 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624805:4,873,523...4,901,907
Ensembl chrNW_004624805:4,873,506...4,901,907 		JBrowse link
G Sec61b SEC61 translocon subunit beta involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624825:1,762,735...1,771,271
Ensembl chrNW_004624825:1,762,734...1,771,233 		JBrowse link
G Sec61g SEC61 translocon subunit gamma involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624740:881,339...886,686
Ensembl chrNW_004624740:881,416...886,594 		JBrowse link
G Sec62 SEC62 homolog, preprotein translocation factor involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624730:48,034,824...48,062,854 JBrowse link
G Sec63 SEC63 homolog, protein translocation regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624780:14,322,651...14,405,674
Ensembl chrNW_004624780:14,322,707...14,405,673 		JBrowse link
protein import into peroxisome matrix term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lonp2 lon peptidase 2, peroxisomal involved_in IEA UniProt GO_REF:0000104 NCBI chrNW_004624914:2,041,353...2,155,669
Ensembl chrNW_004624914:2,041,213...2,155,669 		JBrowse link
G Pex1 peroxisomal biogenesis factor 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624809:668,248...713,036
Ensembl chrNW_004624809:668,345...712,743 		JBrowse link
G Pex10 peroxisomal biogenesis factor 10 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624818:7,598,467...7,605,067
Ensembl chrNW_004624818:7,597,729...7,605,322 		JBrowse link
G Pex12 peroxisomal biogenesis factor 12 involved_in IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chrNW_004624875:3,081,581...3,085,441
Ensembl chrNW_004624875:3,082,505...3,085,540 		JBrowse link
G Pex14 peroxisomal biogenesis factor 14 involved_in ISO (PMID:15146459) UniProt PMID:15146459 NCBI chrNW_004624818:2,082,709...2,224,235
Ensembl chrNW_004624818:2,082,709...2,224,899 		JBrowse link
G Pex16 peroxisomal biogenesis factor 16 acts_upstream_of_or_within ISO (PMID:9922452) MGI PMID:9922452 NCBI chrNW_004624767:2,589,320...2,600,312
Ensembl chrNW_004624767:2,594,428...2,600,191 		JBrowse link
G Pex2 peroxisomal biogenesis factor 2 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624744:14,227,430...14,245,082
Ensembl chrNW_004624744:14,240,570...14,245,183 		JBrowse link
G Pex26 peroxisomal biogenesis factor 26 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624735:9,248,065...9,262,975
Ensembl chrNW_004624735:9,251,046...9,263,199 		JBrowse link
G Pex5 peroxisomal biogenesis factor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624860:3,771,949...3,790,982
Ensembl chrNW_004624860:3,771,963...3,790,985 		JBrowse link
G Pex6 peroxisomal biogenesis factor 6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624754:16,510,980...16,534,695
Ensembl chrNW_004624754:16,510,795...16,527,859 		JBrowse link
G Pex7 peroxisomal biogenesis factor 7 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:9090381) MGI
TreeGrafter
InterPro		 PMID:9090381 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624886:877,359...944,365
Ensembl chrNW_004624886:876,787...944,911 		JBrowse link
G Trim37 tripartite motif containing 37 acts_upstream_of
involved_in		 ISO
IEA		 (PMID:28724525) UniProt
Ensembl		 PMID:28724525 GO_REF:0000107 NCBI chrNW_004624871:899,931...1,049,583
Ensembl chrNW_004624871:912,140...1,021,354 		JBrowse link
protein import into peroxisome matrix, docking term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pex13 peroxisomal biogenesis factor 13 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12897163) InterPro
TreeGrafter
MGI		 PMID:12897163 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624833:914,621...940,661
Ensembl chrNW_004624833:913,337...940,611 		JBrowse link
G Pex14 peroxisomal biogenesis factor 14 involved_in IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chrNW_004624818:2,082,709...2,224,235
Ensembl chrNW_004624818:2,082,709...2,224,899 		JBrowse link
G Pex5 peroxisomal biogenesis factor 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624860:3,771,949...3,790,982
Ensembl chrNW_004624860:3,771,963...3,790,985 		JBrowse link
G Pex5l peroxisomal biogenesis factor 5 like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624730:57,504,554...57,763,423
Ensembl chrNW_004624730:57,504,302...57,762,999 		JBrowse link
protein import into peroxisome matrix, receptor recycling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pex1 peroxisomal biogenesis factor 1 involved_in ISO (PMID:16314507), (PMID:16854980), (PMID:19208625), (PMID:21362118), (PMID:29884772) UniProt PMID:16314507 PMID:16854980 PMID:19208625 PMID:21362118 PMID:29884772 NCBI chrNW_004624809:668,248...713,036
Ensembl chrNW_004624809:668,345...712,743 		JBrowse link
G Pex10 peroxisomal biogenesis factor 10 involved_in ISO (PMID:24662292) UniProt PMID:24662292 NCBI chrNW_004624818:7,598,467...7,605,067
Ensembl chrNW_004624818:7,597,729...7,605,322 		JBrowse link
G Pex12 peroxisomal biogenesis factor 12 involved_in ISO (PMID:24662292) UniProt PMID:24662292 NCBI chrNW_004624875:3,081,581...3,085,441
Ensembl chrNW_004624875:3,082,505...3,085,540 		JBrowse link
G Pex2 peroxisomal biogenesis factor 2 involved_in ISO (PMID:24662292) UniProt PMID:24662292 NCBI chrNW_004624744:14,227,430...14,245,082
Ensembl chrNW_004624744:14,240,570...14,245,183 		JBrowse link
G Pex5 peroxisomal biogenesis factor 5 involved_in ISO (PMID:11336669), (PMID:22371489), (PMID:29884772) UniProt PMID:11336669 PMID:22371489 PMID:29884772 NCBI chrNW_004624860:3,771,949...3,790,982
Ensembl chrNW_004624860:3,771,963...3,790,985 		JBrowse link
G Pex6 peroxisomal biogenesis factor 6 involved_in ISO (PMID:16314507), (PMID:16854980), (PMID:19208625), (PMID:21362118), (PMID:29884772) UniProt PMID:16314507 PMID:16854980 PMID:19208625 PMID:21362118 PMID:29884772 NCBI chrNW_004624754:16,510,980...16,534,695
Ensembl chrNW_004624754:16,510,795...16,527,859 		JBrowse link
G Usp9x ubiquitin specific peptidase 9 X-linked involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624762:14,403,361...14,527,854
Ensembl chrNW_004624762:14,405,560...14,527,639 		JBrowse link
protein import into peroxisome matrix, substrate release term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pex14 peroxisomal biogenesis factor 14 involved_in ISO (PMID:21976670) UniProt PMID:21976670 NCBI chrNW_004624818:2,082,709...2,224,235
Ensembl chrNW_004624818:2,082,709...2,224,899 		JBrowse link
G Pex5 peroxisomal biogenesis factor 5 involved_in ISO (PMID:26344566) UniProt PMID:26344566 NCBI chrNW_004624860:3,771,949...3,790,982
Ensembl chrNW_004624860:3,771,963...3,790,985 		JBrowse link
protein import into peroxisome matrix, translocation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pex13 peroxisomal biogenesis factor 13 involved_in ISO (PMID:28765278) UniProt PMID:28765278 NCBI chrNW_004624833:914,621...940,661
Ensembl chrNW_004624833:913,337...940,611 		JBrowse link
G Pex14 peroxisomal biogenesis factor 14 involved_in ISO (PMID:21525035), (PMID:28765278) UniProt PMID:21525035 PMID:28765278 NCBI chrNW_004624818:2,082,709...2,224,235
Ensembl chrNW_004624818:2,082,709...2,224,899 		JBrowse link
G Pex5 peroxisomal biogenesis factor 5 involved_in ISO (PMID:11336669), (PMID:7719337) UniProt PMID:7719337 PMID:11336669 NCBI chrNW_004624860:3,771,949...3,790,982
Ensembl chrNW_004624860:3,771,963...3,790,985 		JBrowse link
G Pex6 peroxisomal biogenesis factor 6 involved_in ISO (PMID:8670792) UniProt PMID:8670792 NCBI chrNW_004624754:16,510,980...16,534,695
Ensembl chrNW_004624754:16,510,795...16,527,859 		JBrowse link
SRP-dependent cotranslational protein targeting to membrane, translocation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sec61a2 SEC61 translocon subunit alpha 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624805:4,873,523...4,901,907
Ensembl chrNW_004624805:4,873,506...4,901,907 		JBrowse link
G Sec61b SEC61 translocon subunit beta involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624825:1,762,735...1,771,271
Ensembl chrNW_004624825:1,762,734...1,771,233 		JBrowse link
G Srp54 signal recognition particle 54 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624838:1,697,863...1,747,115
Ensembl chrNW_004624838:1,697,863...1,747,136 		JBrowse link
G Tram1 translocation associated membrane protein 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624744:20,618,963...20,653,285
Ensembl chrNW_004624744:20,619,043...20,653,438 		JBrowse link
G Tram1l1 translocation associated membrane protein 1 like 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624867:4,074,379...4,076,346
Ensembl chrNW_004624867:4,075,090...4,076,199 		JBrowse link
G Tram2 translocation associated membrane protein 2 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624855:3,526,391...3,606,640
Ensembl chrNW_004624855:3,526,458...3,601,541 		JBrowse link
G Zfand2b zinc finger AN1-type containing 2B acts_upstream_of_or_within ISO (PMID:24160817) MGI PMID:24160817 NCBI chrNW_004624823:5,805,147...5,808,500
Ensembl chrNW_004624823:5,805,147...5,808,485 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15225
    cellular process 14346
      transmembrane transport 1458
        protein transmembrane transport 66
          intracellular protein transmembrane transport 31
            SRP-dependent cotranslational protein targeting to membrane, translocation 7
            post-translational protein targeting to membrane, translocation + 8
            protein import into peroxisome matrix + 15
            protein import into peroxisome matrix, translocation 4
Path 2
Term Annotations click to browse term
  biological_process 15225
    localization 5008
      macromolecule localization 2805
        cellular macromolecule localization 2417
          protein localization 2405
            establishment of protein localization 1511
              protein transport 1236
                protein transmembrane transport 66
                  intracellular protein transmembrane transport 31
                    SRP-dependent cotranslational protein targeting to membrane, translocation 7
                    post-translational protein targeting to membrane, translocation + 8
                    protein import into peroxisome matrix + 15
                    protein import into peroxisome matrix, translocation 4
paths to the root