Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:intracellular protein transmembrane transport
go back to main search page
Accession:GO:0065002 term browser browse the term
Definition:The directed movement of proteins in a cell, from one side of a membrane to another by means of some agent such as a transporter or pore.
Comment:Note that this term is not intended for use in annotating lateral movement within membranes.
Synonyms:exact_synonym: intracellular membrane translocation of a protein;   intracellular protein membrane transport;   intracellular protein transport across a membrane

GViewer not supported for the selected species.

show annotations for term's descendants           Sort by:
intracellular protein transmembrane transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCR BCR activator of RhoGEF and GTPase acts_upstream_of_or_within ISO (PMID:7889565) MGI PMID:7889565 NCBI chr19:2,569,841...2,703,703
Ensembl chr19:2,566,190...2,702,920 		JBrowse link
G C2CD5 C2 calcium dependent domain containing 5 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr11:22,267,508...22,362,927
Ensembl chr11:22,267,415...22,362,969 		JBrowse link
G RTN2 reticulon 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19720795) Ensembl
MGI		 PMID:19720795 GO_REF:0000107 NCBI chr 6:38,931,473...38,943,057
Ensembl chr 6:38,931,348...38,942,886 		JBrowse link
post-translational protein targeting to membrane, translocation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLP1R glucagon like peptide 1 receptor acts_upstream_of_or_within ISO (PMID:23542788) MGI PMID:23542788 NCBI chr17:33,053,442...33,092,806
Ensembl chr17:33,054,574...33,091,422 		JBrowse link
G HSPA5 heat shock protein family A (Hsp70) member 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:12,920,705...12,925,888
Ensembl chr12:12,920,710...12,927,431 		JBrowse link
G SEC61A1 SEC61 translocon subunit alpha 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr22:52,977,101...52,994,766
Ensembl chr22:52,976,872...52,992,039 		JBrowse link
G SEC61A2 SEC61 translocon subunit alpha 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:12,176,814...12,216,343
Ensembl chr 9:12,176,894...12,215,422 		JBrowse link
G SEC61B SEC61 translocon subunit beta involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:40,194,243...40,202,474
Ensembl chr12:40,194,301...40,202,441 		JBrowse link
G SEC61G SEC61 translocon subunit gamma involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr21:4,114,914...4,122,117
Ensembl chr21:4,114,916...4,122,123 		JBrowse link
G SEC62 SEC62 homolog, preprotein translocation factor involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr15:19,402,135...19,443,079
Ensembl chr15:19,403,526...19,431,747 		JBrowse link
G SEC63 SEC63 homolog, protein translocation regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:65,902,796...65,993,092
Ensembl chr13:65,902,956...65,996,514 		JBrowse link
protein import into peroxisome matrix term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LONP2 lon peptidase 2, peroxisomal involved_in IEA UniProt GO_REF:0000104 NCBI chr 5:34,050,284...34,160,363
Ensembl chr 5:34,050,446...34,160,165 		JBrowse link
G PEX1 peroxisomal biogenesis factor 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr21:56,493,424...56,535,565
Ensembl chr21:56,493,435...56,535,154 		JBrowse link
G PEX10 peroxisomal biogenesis factor 10 involved_in IEA Ensembl
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr20:129,145,587...129,155,687
Ensembl chr20:129,145,638...129,153,968 		JBrowse link
G PEX12 peroxisomal biogenesis factor 12 involved_in ISO (PMID:10562279), (PMID:9090384) UniProt PMID:9090384 PMID:10562279 NCBI chr16:29,049,206...29,054,718 JBrowse link
G PEX12 peroxisomal biogenesis factor 12 involved_in IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 Ensembl chr16:29,050,199...29,052,429 JBrowse link
G PEX14 peroxisomal biogenesis factor 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:121,152,514...121,309,888
Ensembl chr20:121,152,498...121,309,919 		JBrowse link
G PEX16 peroxisomal biogenesis factor 16 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:9922452) MGI
Ensembl		 PMID:9922452 GO_REF:0000107 NCBI chr 1:19,424,155...19,432,430
Ensembl chr 1:19,423,581...19,431,948 		JBrowse link
G PEX2 peroxisomal biogenesis factor 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 8:72,513,975...72,532,399
Ensembl chr 8:72,514,307...72,517,003 		JBrowse link
G PEX5 peroxisomal biogenesis factor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:7,255,078...7,286,500
Ensembl chr11:7,256,182...7,274,938 		JBrowse link
G PEX6 peroxisomal biogenesis factor 6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:29,180,427...29,198,747
Ensembl chr17:29,180,460...29,200,398 		JBrowse link
G PEX7 peroxisomal biogenesis factor 7 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:9090381) MGI
TreeGrafter
Ensembl
InterPro		 PMID:9090381 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr13:36,486,636...36,585,662
Ensembl chr13:36,485,513...36,585,736 		JBrowse link
G TRIM37 tripartite motif containing 37 acts_upstream_of ISO (PMID:28724525) UniProt PMID:28724525 NCBI chr16:34,310,090...34,446,887
Ensembl chr16:34,310,159...34,436,177 		JBrowse link
protein import into peroxisome matrix, docking term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PEX13 peroxisomal biogenesis factor 13 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12897163) Ensembl
TreeGrafter
MGI
InterPro		 PMID:12897163 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr14:45,939,181...45,973,049
Ensembl chr14:45,938,940...45,973,125 		JBrowse link
G PEX14 peroxisomal biogenesis factor 14 involved_in IEA InterPro
TreeGrafter
Ensembl
UniProt		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr20:121,152,514...121,309,888
Ensembl chr20:121,152,498...121,309,919 		JBrowse link
G PEX5 peroxisomal biogenesis factor 5 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr11:7,255,078...7,286,500
Ensembl chr11:7,256,182...7,274,938 		JBrowse link
G PEX5L peroxisomal biogenesis factor 5 like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr15:9,373,826...9,613,276 JBrowse link
protein import into peroxisome matrix, receptor recycling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PEX1 peroxisomal biogenesis factor 1 involved_in ISO (PMID:16314507), (PMID:16854980), (PMID:19208625), (PMID:21362118), (PMID:29884772) UniProt PMID:16314507 PMID:16854980 PMID:19208625 PMID:21362118 PMID:29884772 NCBI chr21:56,493,424...56,535,565
Ensembl chr21:56,493,435...56,535,154 		JBrowse link
G PEX10 peroxisomal biogenesis factor 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:129,145,587...129,155,687
Ensembl chr20:129,145,638...129,153,968 		JBrowse link
G PEX12 peroxisomal biogenesis factor 12 involved_in ISO (PMID:24662292) UniProt PMID:24662292 NCBI chr16:29,049,206...29,054,718 JBrowse link
G PEX2 peroxisomal biogenesis factor 2 involved_in ISO (PMID:24662292) UniProt PMID:24662292 NCBI chr 8:72,513,975...72,532,399
Ensembl chr 8:72,514,307...72,517,003 		JBrowse link
G PEX5 peroxisomal biogenesis factor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:7,255,078...7,286,500
Ensembl chr11:7,256,182...7,274,938 		JBrowse link
G PEX6 peroxisomal biogenesis factor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:29,180,427...29,198,747
Ensembl chr17:29,180,460...29,200,398 		JBrowse link
G USP9X ubiquitin specific peptidase 9 X-linked involved_in ISO (PMID:22371489) UniProt PMID:22371489 NCBI chr  X:38,255,414...38,402,855
Ensembl chr  X:38,256,008...38,403,323
Ensembl chr  Y:38,256,008...38,403,323 		JBrowse link
protein import into peroxisome matrix, substrate release term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PEX14 peroxisomal biogenesis factor 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:121,152,514...121,309,888
Ensembl chr20:121,152,498...121,309,919 		JBrowse link
G PEX5 peroxisomal biogenesis factor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:7,255,078...7,286,500
Ensembl chr11:7,256,182...7,274,938 		JBrowse link
protein import into peroxisome matrix, translocation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PEX13 peroxisomal biogenesis factor 13 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:45,939,181...45,973,049
Ensembl chr14:45,938,940...45,973,125 		JBrowse link
G PEX14 peroxisomal biogenesis factor 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:121,152,514...121,309,888
Ensembl chr20:121,152,498...121,309,919 		JBrowse link
G PEX5 peroxisomal biogenesis factor 5 involved_in ISO (PMID:11336669), (PMID:7719337) UniProt PMID:7719337 PMID:11336669 NCBI chr11:7,255,078...7,286,500
Ensembl chr11:7,256,182...7,274,938 		JBrowse link
G PEX6 peroxisomal biogenesis factor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:29,180,427...29,198,747
Ensembl chr17:29,180,460...29,200,398 		JBrowse link
SRP-dependent cotranslational protein targeting to membrane, translocation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SEC61A1 SEC61 translocon subunit alpha 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr22:52,977,101...52,994,766
Ensembl chr22:52,976,872...52,992,039 		JBrowse link
G SEC61A2 SEC61 translocon subunit alpha 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:12,176,814...12,216,343
Ensembl chr 9:12,176,894...12,215,422 		JBrowse link
G SEC61B SEC61 translocon subunit beta involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:40,194,243...40,202,474
Ensembl chr12:40,194,301...40,202,441 		JBrowse link
G SRP54 signal recognition particle 54 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr24:11,802,671...11,846,534
Ensembl chr24:11,812,672...11,846,675 		JBrowse link
G TRAM1 translocation associated membrane protein 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 8:66,312,103...66,344,738
Ensembl chr 8:66,311,614...66,344,840 		JBrowse link
G TRAM2 translocation associated membrane protein 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr17:19,926,550...20,000,968
Ensembl chr17:19,926,619...20,000,097 		JBrowse link
G ZFAND2B zinc finger AN1-type containing 2B acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:24160817) MGI
Ensembl		 PMID:24160817 GO_REF:0000107 NCBI chr10:105,110,419...105,113,614
Ensembl chr10:105,110,542...105,115,481 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17080
    cellular process 15997
      transmembrane transport 1618
        protein transmembrane transport 72
          intracellular protein transmembrane transport 30
            SRP-dependent cotranslational protein targeting to membrane, translocation 7
            post-translational protein targeting to membrane, translocation + 8
            protein import into peroxisome matrix + 15
            protein import into peroxisome matrix, translocation 4
Path 2
Term Annotations click to browse term
  biological_process 17080
    localization 5434
      macromolecule localization 3021
        cellular macromolecule localization 2581
          protein localization 2569
            establishment of protein localization 1603
              protein transport 1306
                protein transmembrane transport 72
                  intracellular protein transmembrane transport 30
                    SRP-dependent cotranslational protein targeting to membrane, translocation 7
                    post-translational protein targeting to membrane, translocation + 8
                    protein import into peroxisome matrix + 15
                    protein import into peroxisome matrix, translocation 4
paths to the root