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ONTOLOGY REPORT - ANNOTATIONS

Term:intracellular protein transmembrane transport
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Accession:GO:0065002 term browser browse the term
Definition:The directed movement of proteins in a cell, from one side of a membrane to another by means of some agent such as a transporter or pore.
Comment:Note that this term is not intended for use in annotating lateral movement within membranes.
Synonyms:exact_synonym: intracellular membrane translocation of a protein;   intracellular protein membrane transport;   intracellular protein transport across a membrane


show annotations for term's descendants           Sort by:
intracellular protein transmembrane transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCR BCR activator of RhoGEF and GTPase acts_upstream_of_or_within ISO (PMID:7889565) MGI PMID:7889565
G C2CD5 C2 calcium dependent domain containing 5 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr12:63,769,552...63,865,681
Ensembl chr12:66,377,634...66,472,877 		JBrowse link
G RTN2 reticulon 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19720795) Ensembl
MGI		 PMID:19720795 GO_REF:0000107 NCBI chr19:42,434,085...42,446,862
Ensembl chr19:51,030,708...51,043,404 		JBrowse link
post-translational protein targeting to membrane, translocation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLP1R glucagon like peptide 1 receptor acts_upstream_of_or_within ISO (PMID:23542788) MGI PMID:23542788 NCBI chr 6:38,637,838...38,680,423
Ensembl chr 6:39,823,373...39,855,784 		JBrowse link
G HSPA5 heat shock protein family A (Hsp70) member 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:96,351,645...96,356,761
Ensembl chr 9:124,865,211...124,870,458 		JBrowse link
G LOC112441188 protein transport protein Sec61 subunit beta-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:47,865,321...47,865,800 JBrowse link
G SEC61A1 SEC61 translocon subunit alpha 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:125,091,916...125,111,238
Ensembl chr 3:132,457,005...132,476,935 		JBrowse link
G SEC61A2 SEC61 translocon subunit alpha 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:12,136,907...12,175,765
Ensembl chr10:12,102,536...12,161,092 		JBrowse link
G SEC61B SEC61 translocon subunit beta involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:70,312,061...70,320,448
Ensembl chr 9:98,431,059...98,438,914 		JBrowse link
G SEC61G SEC61 translocon subunit gamma involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:55,346,034...55,353,779
Ensembl chr 7:55,657,507...55,664,567 		JBrowse link
G SEC62 SEC62 homolog, preprotein translocation factor involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:166,980,212...167,010,455
Ensembl chr 3:175,034,739...175,064,902 		JBrowse link
G SEC63 SEC63 homolog, protein translocation regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:105,673,265...105,757,422
Ensembl chr 6:109,538,184...109,595,518 		JBrowse link
protein import into peroxisome matrix term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LONP2 lon peptidase 2, peroxisomal involved_in IEA UniProt GO_REF:0000104 NCBI chr16:28,513,060...28,628,181
Ensembl chr16:47,405,018...47,511,124 		JBrowse link
G PEX1 peroxisomal biogenesis factor 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:84,484,965...84,526,309
Ensembl chr 7:98,081,021...98,122,335 		JBrowse link
G PEX10 peroxisomal biogenesis factor 10 involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 Ensembl chr 1:2,270,698...2,278,401 JBrowse link
G PEX12 peroxisomal biogenesis factor 12 involved_in IEA Ensembl
TreeGrafter
UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr17:21,216,181...21,221,107
Ensembl chr17:21,510,286...21,514,310 		JBrowse link
G PEX14 peroxisomal biogenesis factor 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:9,234,928...9,391,086
Ensembl chr 1:10,459,884...10,614,187 		JBrowse link
G PEX16 peroxisomal biogenesis factor 16 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:9922452) MGI
Ensembl		 PMID:9922452 GO_REF:0000107 NCBI chr11:45,864,220...45,872,263
Ensembl chr11:46,355,950...46,364,543 		JBrowse link
G PEX2 peroxisomal biogenesis factor 2 involved_in IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chr 8:73,508,349...73,526,560
Ensembl chr 8:75,146,255...75,147,172 		JBrowse link
G PEX26 peroxisomal biogenesis factor 26 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr22:1,507,601...1,535,859
Ensembl chr22:16,936,405...16,989,730 		JBrowse link
G PEX5 peroxisomal biogenesis factor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:7,318,637...7,340,428
Ensembl chr12:7,235,049...7,255,815 		JBrowse link
G PEX6 peroxisomal biogenesis factor 6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:42,554,509...42,570,701
Ensembl chr 6:43,850,129...43,865,355 		JBrowse link
G PEX7 peroxisomal biogenesis factor 7 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:9090381) MGI
TreeGrafter
Ensembl
InterPro		 PMID:9090381 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:134,582,933...134,675,388
Ensembl chr 6:138,672,179...138,762,830 		JBrowse link
G TRIM37 tripartite motif containing 37 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:28724525) Ensembl
UniProt		 PMID:28724525 GO_REF:0000107 NCBI chr17:53,070,235...53,178,209
Ensembl chr17:57,904,813...58,027,100 		JBrowse link
G TUBA8 tubulin alpha 8 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr22:1,541,154...1,561,852
Ensembl chr22:16,936,405...16,989,730 		JBrowse link
protein import into peroxisome matrix, docking term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PEX13 peroxisomal biogenesis factor 13 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12897163) InterPro
TreeGrafter
MGI
Ensembl		 PMID:12897163 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr2A:61,108,970...61,143,615
Ensembl chr2A:62,250,887...62,285,151 		JBrowse link
G PEX14 peroxisomal biogenesis factor 14 involved_in IEA UniProt
TreeGrafter
Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:9,234,928...9,391,086
Ensembl chr 1:10,459,884...10,614,187 		JBrowse link
G PEX5 peroxisomal biogenesis factor 5 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr12:7,318,637...7,340,428
Ensembl chr12:7,235,049...7,255,815 		JBrowse link
G PEX5L peroxisomal biogenesis factor 5 like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 3:176,823,918...177,065,528
Ensembl chr 3:184,999,947...185,237,645 		JBrowse link
protein import into peroxisome matrix, receptor recycling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PEX1 peroxisomal biogenesis factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:84,484,965...84,526,309
Ensembl chr 7:98,081,021...98,122,335 		JBrowse link
G PEX10 peroxisomal biogenesis factor 10 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 1:2,270,698...2,278,401 JBrowse link
G PEX12 peroxisomal biogenesis factor 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:21,216,181...21,221,107
Ensembl chr17:21,510,286...21,514,310 		JBrowse link
G PEX2 peroxisomal biogenesis factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:73,508,349...73,526,560
Ensembl chr 8:75,146,255...75,147,172 		JBrowse link
G PEX5 peroxisomal biogenesis factor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:7,318,637...7,340,428
Ensembl chr12:7,235,049...7,255,815 		JBrowse link
G PEX6 peroxisomal biogenesis factor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:42,554,509...42,570,701
Ensembl chr 6:43,850,129...43,865,355 		JBrowse link
G USP9X ubiquitin specific peptidase 9 X-linked involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:33,535,543...33,683,220
Ensembl chr  X:41,232,041...41,379,910 		JBrowse link
protein import into peroxisome matrix, substrate release term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PEX14 peroxisomal biogenesis factor 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:9,234,928...9,391,086
Ensembl chr 1:10,459,884...10,614,187 		JBrowse link
G PEX5 peroxisomal biogenesis factor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:7,318,637...7,340,428
Ensembl chr12:7,235,049...7,255,815 		JBrowse link
protein import into peroxisome matrix, translocation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PEX13 peroxisomal biogenesis factor 13 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:61,108,970...61,143,615
Ensembl chr2A:62,250,887...62,285,151 		JBrowse link
G PEX14 peroxisomal biogenesis factor 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:9,234,928...9,391,086
Ensembl chr 1:10,459,884...10,614,187 		JBrowse link
G PEX5 peroxisomal biogenesis factor 5 involved_in ISO (PMID:11336669), (PMID:7719337) UniProt PMID:7719337 PMID:11336669 NCBI chr12:7,318,637...7,340,428
Ensembl chr12:7,235,049...7,255,815 		JBrowse link
G PEX6 peroxisomal biogenesis factor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:42,554,509...42,570,701
Ensembl chr 6:43,850,129...43,865,355 		JBrowse link
SRP-dependent cotranslational protein targeting to membrane, translocation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100987236 signal recognition particle subunit SRP54 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:15,733,446...15,779,987
Ensembl chr14:33,920,287...34,017,151 		JBrowse link
G LOC112441188 protein transport protein Sec61 subunit beta-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:47,865,321...47,865,800 JBrowse link
G SEC61A1 SEC61 translocon subunit alpha 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 3:125,091,916...125,111,238
Ensembl chr 3:132,457,005...132,476,935 		JBrowse link
G SEC61A2 SEC61 translocon subunit alpha 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:12,136,907...12,175,765
Ensembl chr10:12,102,536...12,161,092 		JBrowse link
G SEC61B SEC61 translocon subunit beta involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:70,312,061...70,320,448
Ensembl chr 9:98,431,059...98,438,914 		JBrowse link
G TRAM1 translocation associated membrane protein 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 8:67,098,588...67,133,511
Ensembl chr 8:68,759,040...68,794,303 		JBrowse link
G TRAM2 translocation associated membrane protein 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:52,049,162...52,131,825
Ensembl chr 6:53,322,401...53,398,046 		JBrowse link
G ZFAND2B zinc finger AN1-type containing 2B acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:24160817) MGI
Ensembl		 PMID:24160817 GO_REF:0000107 NCBI chr2B:106,464,364...106,467,217
Ensembl chr2B:225,055,969...225,058,647 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16768
    cellular process 15760
      transmembrane transport 1605
        protein transmembrane transport 72
          intracellular protein transmembrane transport 32
            SRP-dependent cotranslational protein targeting to membrane, translocation 8
            post-translational protein targeting to membrane, translocation + 9
            protein import into peroxisome matrix + 16
            protein import into peroxisome matrix, translocation 4
Path 2
Term Annotations click to browse term
  biological_process 16768
    localization 5348
      macromolecule localization 2996
        cellular macromolecule localization 2563
          protein localization 2551
            establishment of protein localization 1600
              protein transport 1307
                protein transmembrane transport 72
                  intracellular protein transmembrane transport 32
                    SRP-dependent cotranslational protein targeting to membrane, translocation 8
                    post-translational protein targeting to membrane, translocation + 9
                    protein import into peroxisome matrix + 16
                    protein import into peroxisome matrix, translocation 4
paths to the root