Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:intracellular protein transmembrane transport
go back to main search page
Accession:GO:0065002 term browser browse the term
Definition:The directed movement of proteins in a cell, from one side of a membrane to another by means of some agent such as a transporter or pore.
Comment:Note that this term is not intended for use in annotating lateral movement within membranes.
Synonyms:exact_synonym: intracellular membrane translocation of a protein;   intracellular protein membrane transport;   intracellular protein transport across a membrane


show annotations for term's descendants           Sort by:
intracellular protein transmembrane transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcr BCR activator of RhoGEF and GTPase acts_upstream_of_or_within ISO MGI:2154396 (PMID:7889565) RGD PMID:7889565 NCBI chr20:13,469,325...13,596,942
Ensembl chr20:13,471,668...13,597,016 		JBrowse link
G C2cd5 C2 calcium-dependent domain containing 5 involved_in ISO
IBA		 (PMID:21907143)
GO_REF:0000033		 RGD
GO_Central		 PMID:21907143 GO_REF:0000033 NCBI chr 4:175,969,544...176,055,597
Ensembl chr 4:175,969,545...176,055,558 		JBrowse link
G Rtn2 reticulon 2 acts_upstream_of_or_within ISS
ISO		 GO_REF:0000024
MGI:3528884 (PMID:19720795)		 UniProt
RGD		 PMID:19720795 GO_REF:0000024 NCBI chr 1:78,935,056...78,948,069
Ensembl chr 1:78,935,104...78,948,069 		JBrowse link
post-translational protein targeting to membrane, translocation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Glp1r glucagon-like peptide 1 receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2150310 (PMID:23542788)		 Ensembl
RGD		 PMID:23542788 GO_REF:0000107 NCBI chr20:8,972,004...9,010,241
Ensembl chr20:8,972,004...9,010,241 		JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:29719251)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:29719251 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:18,055,507...18,059,969
Ensembl chr 3:18,055,405...18,059,891 		JBrowse link
G Sec61a1 SEC61 translocon subunit alpha 1 involved_in ISS
ISO
IEA
IBA		 GO_REF:0000024
(PMID:29719251)
GO_REF:0000107
GO_REF:0000033		 UniProt
RGD
Ensembl
GO_Central		 PMID:29719251 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:120,973,519...120,987,871
Ensembl chr 4:120,960,626...120,987,925 		JBrowse link
G Sec61a2 SEC61 translocon subunit alpha 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:72,407,574...72,445,630
Ensembl chr17:72,407,671...72,434,494 		JBrowse link
G Sec61b SEC61 translocon subunit beta involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:61,773,594...61,781,804
Ensembl chr 5:61,773,594...61,781,804 		JBrowse link
G Sec61g Sec61 translocon subunit gamma involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:90,899,766...90,906,143
Ensembl chr14:90,899,768...90,906,162 		JBrowse link
G Sec61g-ps4 Sec61 translocon subunit gamma, pseudogene 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:113,427,370...113,427,696
Ensembl chr  X:113,427,440...113,427,646 		JBrowse link
G Sec61gl2 Sec61 translocon subunit gamma like 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:75,638,449...75,638,655
Ensembl chr17:75,638,449...75,638,655 		JBrowse link
G Sec61gl4 SEC61 translocon subunit gamma like 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:41,302,673...41,303,608 JBrowse link
G Sec62 SEC62 homolog, preprotein translocation factor involved_in ISO
IBA		 (PMID:29719251)
GO_REF:0000033		 RGD
GO_Central		 PMID:29719251 GO_REF:0000033 NCBI chr 2:112,570,810...112,598,198
Ensembl chr 2:112,570,819...112,601,814 		JBrowse link
G Sec63 SEC63 homolog, protein translocation regulator involved_in ISO (PMID:29719251) RGD PMID:29719251 NCBI chr20:46,245,101...46,314,055
Ensembl chr20:46,245,101...46,314,055 		JBrowse link
protein import into peroxisome matrix term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lonp2 lon peptidase 2, peroxisomal involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr19:20,407,475...20,498,985
Ensembl chr19:20,407,477...20,499,014 		JBrowse link
G Pex1 peroxisomal biogenesis factor 1 involved_in ISO
IBA		 (PMID:9398847)
GO_REF:0000033		 RGD
GO_Central		 PMID:9398847 GO_REF:0000033 NCBI chr 4:30,519,950...30,558,953
Ensembl chr 4:30,519,955...30,558,921 		JBrowse link
G Pex10 peroxisomal biogenesis factor 10 involved_in ISO
IBA		 (PMID:9683594)
GO_REF:0000033
(PMID:10862081)		 RGD
GO_Central		 PMID:9683594 PMID:10862081 GO_REF:0000033 NCBI chr 5:165,627,799...165,632,965
Ensembl chr 5:165,627,799...165,632,965 		JBrowse link
G Pex12 peroxisomal biogenesis factor 12 involved_in ISO
IBA		 (PMID:10562279), (PMID:9090384)
GO_REF:0000033		 RGD
GO_Central		 PMID:9090384 PMID:10562279 GO_REF:0000033 NCBI chr10:68,095,776...68,103,812
Ensembl chr10:68,095,776...68,099,428 		JBrowse link
G Pex14 peroxisomal biogenesis factor 14 involved_in ISO (PMID:15146459) RGD PMID:15146459 NCBI chr 5:159,399,776...159,536,260
Ensembl chr 5:159,399,776...159,536,272 		JBrowse link
G Pex16 peroxisomal biogenesis factor 16 acts_upstream_of_or_within ISO (PMID:9922452) RGD PMID:9922452 NCBI chr 3:78,347,212...78,352,603
Ensembl chr 3:78,343,164...78,353,207 		JBrowse link
G Pex2 peroxisomal biogenesis factor 2 involved_in ISO (PMID:10528859) RGD PMID:10528859 NCBI chr 2:96,050,380...96,072,928
Ensembl chr 2:96,045,958...96,073,404 		JBrowse link
G Pex26 peroxisomal biogenesis factor 26 involved_in ISO
IBA		 (PMID:12717447), (PMID:15858711), (PMID:16257970)
GO_REF:0000033		 RGD
GO_Central		 PMID:12717447 PMID:15858711 PMID:16257970 GO_REF:0000033 NCBI chr 4:154,414,332...154,426,954
Ensembl chr 4:154,414,849...154,426,952 		JBrowse link
G Pex5 peroxisomal biogenesis factor 5 involved_in ISO
ISS		 (MGI:5442515|PMID:11463335)
UniProtKB:O09012 (PMID:11463335), (PMID:16314507), (PMID:17157249), (PMID:18346465), (PMID:21976670), (PMID:24235149), (PMID:24662292), (PMID:26344566), (PMID:33389129)
(PMID:25538232)
UniProtKB:O09012 (PMID:11546814), (PMID:11931631)
GO_REF:0000024		 RGD
UniProt		 PMID:11463335 PMID:11546814 PMID:11931631 PMID:16314507 PMID:17157249 More... GO_REF:0000024 MGI:5442515 NCBI chr 4:157,270,671...157,296,432
Ensembl chr 4:157,270,672...157,296,431 		JBrowse link
G Pex6 peroxisomal biogenesis factor 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:14,258,145...14,270,335
Ensembl chr 9:14,258,145...14,270,303 		JBrowse link
G Pex7 peroxisomal biogenesis factor 7 acts_upstream_of_or_within
involved_in		 ISO
IBA		 (PMID:9090381)
GO_REF:0000033
(MGI:3052413|PMID:12915479)
(PMID:11546814), (PMID:12522768), (PMID:22057399), (PMID:25538232)		 RGD
GO_Central		 PMID:9090381 PMID:11546814 PMID:12522768 PMID:12915479 PMID:22057399 More... GO_REF:0000033 MGI:3052413 NCBI chr 1:14,582,698...14,646,686
Ensembl chr 1:14,582,699...14,646,748 		JBrowse link
G Trim37 tripartite motif-containing 37 acts_upstream_of ISO (PMID:28724525) RGD PMID:28724525 NCBI chr10:71,943,384...72,075,563
Ensembl chr10:71,943,375...72,075,558 		JBrowse link
protein import into peroxisome matrix, docking term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pex13 peroxisomal biogenesis factor 13 involved_in
acts_upstream_of_or_within		 ISS
ISO
IBA
IEA		 GO_REF:0000024
MGI:2384515 (PMID:12897163)
GO_REF:0000033
GO_REF:0000002
(PMID:28765278), (PMID:8858165)		 UniProt
RGD
GO_Central
InterPro		 PMID:8858165 PMID:12897163 PMID:28765278 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 NCBI chr14:97,602,829...97,621,233
Ensembl chr14:97,603,539...97,621,262 		JBrowse link
G Pex14 peroxisomal biogenesis factor 14 involved_in IEA
IBA
ISO
IDA		 GO_REF:0000104
GO_REF:0000033
(PMID:11438541), (PMID:25538232), (PMID:28765278)
PMID:19122147		 UniProt
GO_Central
RGD		 PMID:11438541 PMID:25538232 PMID:28765278 PMID:19122147 GO_REF:0000033 GO_REF:0000104, RGD:155230698 NCBI chr 5:159,399,776...159,536,260
Ensembl chr 5:159,399,776...159,536,272 		JBrowse link
G Pex5 peroxisomal biogenesis factor 5 involved_in ISO
IBA		 (PMID:21976670)
GO_REF:0000033		 RGD
GO_Central		 PMID:21976670 GO_REF:0000033 NCBI chr 4:157,270,671...157,296,432
Ensembl chr 4:157,270,672...157,296,431 		JBrowse link
G Pex5l peroxisomal biogenesis factor 5-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:115,694,868...115,908,365
Ensembl chr 2:115,700,972...115,913,628 		JBrowse link
protein import into peroxisome matrix, receptor recycling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pex1 peroxisomal biogenesis factor 1 involved_in ISO (PMID:16314507), (PMID:16854980), (PMID:19208625), (PMID:21362118), (PMID:29884772) RGD PMID:16314507 PMID:16854980 PMID:19208625 PMID:21362118 PMID:29884772 NCBI chr 4:30,519,950...30,558,953
Ensembl chr 4:30,519,955...30,558,921 		JBrowse link
G Pex10 peroxisomal biogenesis factor 10 involved_in ISO (PMID:24662292) RGD PMID:24662292 NCBI chr 5:165,627,799...165,632,965
Ensembl chr 5:165,627,799...165,632,965 		JBrowse link
G Pex12 peroxisomal biogenesis factor 12 involved_in ISO (PMID:24662292) RGD PMID:24662292 NCBI chr10:68,095,776...68,103,812
Ensembl chr10:68,095,776...68,099,428 		JBrowse link
G Pex2 peroxisomal biogenesis factor 2 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:24662292)		 UniProt
Ensembl
RGD		 PMID:24662292 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:96,050,380...96,072,928
Ensembl chr 2:96,045,958...96,073,404 		JBrowse link
G Pex5 peroxisomal biogenesis factor 5 involved_in ISS
ISO		 GO_REF:0000024
(PMID:11336669), (PMID:22371489), (PMID:29884772)		 UniProt
RGD		 PMID:11336669 PMID:22371489 PMID:29884772 GO_REF:0000024 NCBI chr 4:157,270,671...157,296,432
Ensembl chr 4:157,270,672...157,296,431 		JBrowse link
G Pex6 peroxisomal biogenesis factor 6 involved_in ISS
ISO		 GO_REF:0000024
(PMID:16314507), (PMID:16854980), (PMID:19208625), (PMID:21362118), (PMID:29884772)		 UniProt
RGD		 PMID:16314507 PMID:16854980 PMID:19208625 PMID:21362118 PMID:29884772 GO_REF:0000024 NCBI chr 9:14,258,145...14,270,335
Ensembl chr 9:14,258,145...14,270,303 		JBrowse link
G Usp9x ubiquitin specific peptidase 9, X-linked involved_in ISO (PMID:22371489) RGD PMID:22371489 NCBI chr  X:9,588,825...9,726,993
Ensembl chr  X:9,588,825...9,696,711 		JBrowse link
protein import into peroxisome matrix, substrate release term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pex14 peroxisomal biogenesis factor 14 involved_in ISO
IEA		 (PMID:21976670)
GO_REF:0000107		 RGD
Ensembl		 PMID:21976670 GO_REF:0000107 NCBI chr 5:159,399,776...159,536,260
Ensembl chr 5:159,399,776...159,536,272 		JBrowse link
G Pex5 peroxisomal biogenesis factor 5 involved_in ISS
ISO		 GO_REF:0000024
(PMID:26344566)		 UniProt
RGD		 PMID:26344566 GO_REF:0000024 NCBI chr 4:157,270,671...157,296,432
Ensembl chr 4:157,270,672...157,296,431 		JBrowse link
protein import into peroxisome matrix, translocation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pex13 peroxisomal biogenesis factor 13 involved_in ISO (PMID:28765278) RGD PMID:28765278 NCBI chr14:97,602,829...97,621,233
Ensembl chr14:97,603,539...97,621,262 		JBrowse link
G Pex14 peroxisomal biogenesis factor 14 involved_in ISO
IEA		 (PMID:21525035), (PMID:28765278)
GO_REF:0000107		 RGD
Ensembl		 PMID:21525035 PMID:28765278 GO_REF:0000107 NCBI chr 5:159,399,776...159,536,260
Ensembl chr 5:159,399,776...159,536,272 		JBrowse link
G Pex5 peroxisomal biogenesis factor 5 involved_in ISO (PMID:11336669), (PMID:7719337) RGD PMID:7719337 PMID:11336669 NCBI chr 4:157,270,671...157,296,432
Ensembl chr 4:157,270,672...157,296,431 		JBrowse link
G Pex6 peroxisomal biogenesis factor 6 involved_in ISO (PMID:8670792) RGD PMID:8670792 NCBI chr 9:14,258,145...14,270,335
Ensembl chr 9:14,258,145...14,270,303 		JBrowse link
SRP-dependent cotranslational protein targeting to membrane, translocation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sec61a1 SEC61 translocon subunit alpha 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:120,973,519...120,987,871
Ensembl chr 4:120,960,626...120,987,925 		JBrowse link
G Sec61a2 SEC61 translocon subunit alpha 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:72,407,574...72,445,630
Ensembl chr17:72,407,671...72,434,494 		JBrowse link
G Sec61b SEC61 translocon subunit beta involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:61,773,594...61,781,804
Ensembl chr 5:61,773,594...61,781,804 		JBrowse link
G Srp54a signal recognition particle 54A involved_in ISO
IBA		 (PMID:8521805)
GO_REF:0000033		 RGD
GO_Central		 PMID:8521805 GO_REF:0000033 NCBI chr 6:72,587,584...72,626,878
Ensembl chr 6:72,587,605...72,625,189 		JBrowse link
G Tram1 translocation associated membrane protein 1 involved_in IEA
ISO		 GO_REF:0000002
(PMID:8698819)		 InterPro
RGD		 PMID:8698819 GO_REF:0000002 NCBI chr 5:5,642,579...5,667,666
Ensembl chr 5:5,642,546...5,686,971 		JBrowse link
G Tram2 translocation associated membrane protein 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:23,419,204...23,498,745
Ensembl chr 9:23,424,232...23,498,689 		JBrowse link
G Zfand2b zinc finger AN1-type containing 2B acts_upstream_of_or_within ISO (PMID:24160817) RGD PMID:24160817 NCBI chr 9:76,665,466...76,668,447
Ensembl chr 9:76,665,546...76,668,445 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20115
    cellular process 18524
      transmembrane transport 1704
        protein transmembrane transport 83
          intracellular protein transmembrane transport 33
            SRP-dependent cotranslational protein targeting to membrane, translocation 7
            post-translational protein targeting to membrane, translocation + 11
            protein import into peroxisome matrix + 15
            protein import into peroxisome matrix, translocation 4
Path 2
Term Annotations click to browse term
  biological_process 20115
    localization 5683
      macromolecule localization 3201
        cellular macromolecule localization 2712
          protein localization 2700
            establishment of protein localization 1768
              protein transport 1464
                protein transmembrane transport 83
                  intracellular protein transmembrane transport 33
                    SRP-dependent cotranslational protein targeting to membrane, translocation 7
                    post-translational protein targeting to membrane, translocation + 11
                    protein import into peroxisome matrix + 15
                    protein import into peroxisome matrix, translocation 4
paths to the root