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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of programmed necrotic cell death
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Accession:GO:0062098 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of programmed necrotic cell death.



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regulation of programmed necrotic cell death term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asah1 N-acylsphingosine amidohydrolase 1 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:10974027)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:10974027 GO_REF:0000024 GO_REF:0000107 NCBI chr16:50,966,404...50,997,827
Ensembl chr16:50,966,229...51,008,233
JBrowse link
negative regulation of necroptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adprs ADP-ribosylserine hydrolase involved_in ISO (PMID:30830864) RGD PMID:30830864 NCBI chr 5:138,614,022...138,619,296
Ensembl chr 5:138,614,022...138,619,296
JBrowse link
G Arhgef2 Rho/Rac guanine nucleotide exchange factor 2 involved_in ISO (PMID:22711822) RGD PMID:22711822 NCBI chr 2:174,061,126...174,118,355
Ensembl chr 2:174,062,976...174,118,355
JBrowse link
G Birc2 baculoviral IAP repeat-containing 2 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:104798 (PMID:21052097)
GO_Central
RGD
PMID:21052097 GO_REF:0000033 NCBI chr 8:4,968,856...4,989,325
Ensembl chr 8:4,968,842...4,988,732
JBrowse link
G Birc3 baculoviral IAP repeat-containing 3 involved_in IBA
ISO
GO_REF:0000033
(PMID:21052097)
GO_Central
RGD
PMID:21052097 GO_REF:0000033 NCBI chr 8:5,000,844...5,028,470
Ensembl chr 8:5,000,845...5,015,802
JBrowse link
G Bok BCL2 family apoptosis regulator BOK involved_in ISO (PMID:27098698) RGD PMID:27098698 NCBI chr 9:94,223,493...94,234,476
Ensembl chr 9:94,223,389...94,234,476
JBrowse link
G Casp8 caspase 8 involved_in
acts_upstream_of_or_within
ISO
ISS
(PMID:31827280)
(PMID:31511692), (PMID:31748744), (PMID:31827281)
MGI:104798|MGI:1336166|MGI:1921506|MGI:2154952 (PMID:21368763), (PMID:21402742), (PMID:22037414), (PMID:22089168)
GO_REF:0000024
RGD
UniProt
PMID:21368763 PMID:21402742 PMID:22037414 PMID:22089168 PMID:31511692 More... GO_REF:0000024 NCBI chr 9:60,263,863...60,312,542
Ensembl chr 9:60,264,075...60,312,542
JBrowse link
G Cav1 caveolin 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:23049990)
Ensembl
RGD
PMID:23049990 GO_REF:0000107 NCBI chr 4:45,640,624...45,673,708
Ensembl chr 4:45,634,918...45,673,705
JBrowse link
G Cflar CASP8 and FADD-like apoptosis regulator acts_upstream_of_or_within ISO MGI:104798|MGI:1261423|MGI:2154952 (PMID:21368763), (PMID:22089168), (PMID:22675671) RGD PMID:21368763 PMID:22089168 PMID:22675671 NCBI chr 9:60,185,338...60,236,173
Ensembl chr 9:60,185,452...60,237,034
JBrowse link
G Fadd Fas associated via death domain acts_upstream_of_or_within ISO MGI:104798|MGI:2154952 (PMID:22089168), (PMID:22675671) RGD PMID:22089168 PMID:22675671 NCBI chr 1:199,743,200...199,745,746
Ensembl chr 1:199,739,994...199,745,653
JBrowse link
G Map3k7 mitogen activated protein kinase kinase kinase 7 involved_in ISO (PMID:21052097) RGD PMID:21052097 NCBI chr 5:46,356,973...46,415,597
Ensembl chr 5:46,357,931...46,415,597
JBrowse link
G Mir101-2 microRNA 101-2 involved_in ISO (PMID:25910754) RGD PMID:25910754 NCBI chr 1:226,860,371...226,860,467
Ensembl chr 1:226,860,371...226,860,467
JBrowse link
G Mir101a microRNA 101a involved_in ISO (PMID:25910754) RGD PMID:25910754 NCBI chr 5:115,966,332...115,966,406
Ensembl chr 5:115,966,328...115,966,410
JBrowse link
G Mir214 microRNA 214 involved_in ISO (PMID:25910754) RGD PMID:25910754 NCBI chr13:74,588,374...74,588,481
Ensembl chr13:74,588,372...74,588,481
JBrowse link
G Mir22 microRNA 22 involved_in ISO (PMID:25910754) RGD PMID:25910754 NCBI chr10:60,307,039...60,307,133
Ensembl chr10:60,307,039...60,307,133
JBrowse link
G Mir221 microRNA 221 involved_in ISO (PMID:25910754) RGD PMID:25910754 NCBI chr  X:3,429,465...3,429,573
Ensembl chr  X:3,429,465...3,429,573
JBrowse link
G Mutyh mutY DNA glycosylase involved_in IEA
ISO
GO_REF:0000107
(PMID:28059467)
Ensembl
RGD
PMID:28059467 GO_REF:0000107 NCBI chr 5:130,274,034...130,286,149
Ensembl chr 5:130,274,122...130,286,146
JBrowse link
G Peli1 pellino E3 ubiquitin protein ligase 1 involved_in ISO (PMID:29883609) RGD PMID:29883609 NCBI chr14:95,254,274...95,309,168
Ensembl chr14:95,254,589...95,308,285
Ensembl chr 1:95,254,589...95,308,285
JBrowse link
G Rbck1 RANBP2-type and C3HC4-type zinc finger containing 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:104798 (PMID:22089168)
Ensembl
RGD
PMID:22089168 GO_REF:0000107 NCBI chr 3:140,789,079...140,806,017
Ensembl chr 3:140,789,080...140,806,005
JBrowse link
G Ripk1 receptor interacting serine/threonine kinase 1 involved_in ISO (PMID:24813849), (PMID:24813850), (PMID:27819681), (PMID:27819682) RGD PMID:24813849 PMID:24813850 PMID:27819681 PMID:27819682 NCBI chr17:30,839,639...30,871,824
Ensembl chr17:30,839,650...30,871,824
JBrowse link
G Rnf31 ring finger protein 31 acts_upstream_of_or_within ISO MGI:104798 (PMID:22089168) RGD PMID:22089168 NCBI chr15:29,083,047...29,095,328
Ensembl chr15:29,083,631...29,101,915
JBrowse link
G Slc25a4 solute carrier family 25 member 4 involved_in IEA
ISO
GO_REF:0000107
(PMID:16507998)
Ensembl
RGD
PMID:16507998 GO_REF:0000107 NCBI chr16:46,072,935...46,076,730
Ensembl chr16:46,072,939...46,076,733
JBrowse link
G Ybx3 Y box binding protein 3 involved_in IEA
ISO
GO_REF:0000107
(PMID:22711822)
Ensembl
RGD
PMID:22711822 GO_REF:0000107 NCBI chr 4:165,129,747...165,153,101
Ensembl chr 4:165,129,758...165,153,161
JBrowse link
negative regulation of programmed necrotic cell death term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg7 autophagy related 7 IMP RGD PMID:30144448 RGD:407571674 NCBI chr 4:147,718,663...147,925,656
Ensembl chr 4:147,718,752...147,925,593
JBrowse link
G Nol3 nucleolar protein 3 involved_in IEA
ISO
GO_REF:0000107
(PMID:24440909)
Ensembl
RGD
PMID:24440909 GO_REF:0000107 NCBI chr19:33,154,061...33,158,250
Ensembl chr19:33,154,062...33,158,250
JBrowse link
G Nupr1 nuclear protein 1, transcriptional regulator involved_in ISO
ISS
(PMID:30451898)
GO_REF:0000024
RGD
UniProt
PMID:30451898 GO_REF:0000024 NCBI chr 1:181,213,292...181,215,327
Ensembl chr 1:181,213,368...181,215,281
JBrowse link
positive regulation of necroptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aifm1 apoptosis inducing factor, mitochondria associated 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:12114629), (PMID:21467298)
UniProt
RGD
PMID:12114629 PMID:21467298 GO_REF:0000024 NCBI chr  X:127,650,223...127,689,356
Ensembl chr  X:127,650,226...127,689,256
JBrowse link
G Casp6 caspase 6 involved_in ISO
IEA
ISS
(PMID:32298652)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:32298652 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:218,466,063...218,478,503
Ensembl chr 2:218,466,076...218,478,502
JBrowse link
G Gzmb granzyme B IMP RGD PMID:19895873 RGD:2325193 NCBI chr15:30,343,352...30,346,814
Ensembl chr15:30,173,603...30,346,814
JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:12114629), (PMID:17116882)
UniProt
RGD
PMID:12114629 PMID:17116882 GO_REF:0000024 NCBI chr13:92,307,593...92,339,406
Ensembl chr13:92,307,586...92,339,404
JBrowse link
G Ripk1 receptor interacting serine/threonine kinase 1 involved_in IMP
ISO
(PMID:22028622), (PMID:22274400), (PMID:22817896) RGD PMID:22028622 PMID:22274400 PMID:22817896 PMID:23386613 PMID:22372834 RGD:7777171, RGD:7777172 NCBI chr17:30,839,639...30,871,824
Ensembl chr17:30,839,650...30,871,824
JBrowse link
G Ripk3 receptor-interacting serine-threonine kinase 3 involved_in ISO
IEA
ISS
(PMID:22265414), (PMID:22817896)
(PMID:21052097), (PMID:22265414), (PMID:22423968), (PMID:24813849), (PMID:24813850), (PMID:27321907), (PMID:32200799), (PMID:32296175)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:21052097 PMID:22265414 PMID:22423968 PMID:22817896 PMID:24813849 More... GO_REF:0000024 GO_REF:0000107 NCBI chr15:29,283,153...29,292,107
Ensembl chr15:29,283,145...29,292,121
JBrowse link
G Zbp1 Z-DNA binding protein 1 involved_in ISO
ISS
(PMID:32200799)
(PMID:22423968), (PMID:27746097), (PMID:27819681), (PMID:27819682), (PMID:27917412), (PMID:29073079), (PMID:30050136), (PMID:32200799), (PMID:32296175), (PMID:32350114), (PMID:33109609)
GO_REF:0000024
RGD
UniProt
PMID:22423968 PMID:27746097 PMID:27819681 PMID:27819682 PMID:27917412 More... GO_REF:0000024 NCBI chr 3:161,993,351...162,009,297
Ensembl chr 3:161,993,351...162,003,870
JBrowse link
positive regulation of programmed necrotic cell death term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ripk1 receptor interacting serine/threonine kinase 1 involved_in ISO (PMID:20550618) RGD PMID:20550618 NCBI chr17:30,839,639...30,871,824
Ensembl chr17:30,839,650...30,871,824
JBrowse link
G Tp53 tumor protein p53 involved_in IEA
ISO
GO_REF:0000107
(PMID:27258785)
Ensembl
RGD
PMID:27258785 GO_REF:0000107 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
JBrowse link
G Tspo translocator protein IMP RGD PMID:15284300 RGD:2317153 NCBI chr 7:114,720,188...114,730,450
Ensembl chr 7:114,720,188...114,730,450
JBrowse link
regulation of necroptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Birc2 baculoviral IAP repeat-containing 2 involved_in ISO (PMID:21737330) RGD PMID:21737330 NCBI chr 8:4,968,856...4,989,325
Ensembl chr 8:4,968,842...4,988,732
JBrowse link
G Birc3 baculoviral IAP repeat-containing 3 involved_in ISO (PMID:21737330) RGD PMID:21737330 NCBI chr 8:5,000,844...5,028,470
Ensembl chr 8:5,000,845...5,015,802
JBrowse link
G Cflar CASP8 and FADD-like apoptosis regulator involved_in ISO (PMID:21737330) RGD PMID:21737330 NCBI chr 9:60,185,338...60,236,173
Ensembl chr 9:60,185,452...60,237,034
JBrowse link
G Cyld CYLD lysine 63 deubiquitinase involved_in ISO (PMID:27458237)
(PMID:28701375)
RGD PMID:27458237 PMID:28701375 NCBI chr19:18,310,632...18,373,696
Ensembl chr19:18,314,019...18,373,658
JBrowse link
G Fadd Fas associated via death domain IMP RGD PMID:26038570 RGD:11341801 NCBI chr 1:199,743,200...199,745,746
Ensembl chr 1:199,739,994...199,745,653
JBrowse link
G Spata2 spermatogenesis associated 2 involved_in ISS
ISO
IBA
GO_REF:0000024
(PMID:28701375)
GO_REF:0000033
(PMID:27307491), (PMID:27458237), (PMID:27545878)
UniProt
RGD
GO_Central
PMID:27307491 PMID:27458237 PMID:27545878 PMID:28701375 GO_REF:0000024 GO_REF:0000033 NCBI chr 3:156,202,962...156,213,283
Ensembl chr 3:156,202,967...156,211,705
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20536
    regulation of biological process 13376
      regulation of cellular process 13014
        regulation of programmed cell death 1755
          regulation of programmed necrotic cell death 36
            negative regulation of programmed necrotic cell death + 25
            positive regulation of programmed necrotic cell death + 9
            regulation of necroptotic process + 30
Path 2
Term Annotations click to browse term
  biological_process 20536
    biological regulation 13822
      regulation of biological process 13376
        regulation of cellular process 13014
          regulation of programmed cell death 1755
            regulation of programmed necrotic cell death 36
              negative regulation of programmed necrotic cell death + 25
              positive regulation of programmed necrotic cell death + 9
              regulation of necroptotic process + 30
paths to the root