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ONTOLOGY REPORT - ANNOTATIONS


Term:collagen-containing extracellular matrix
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Accession:GO:0062023 term browser browse the term
Definition:An extracellular matrix consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that provides not only essential physical scaffolding for the cellular constituents but can also initiate crucial biochemical and biomechanical cues required for tissue morphogenesis, differentiation and homeostasis. The components are secreted by cells in the vicinity and form a sheet underlying or overlying cells such as endothelial and epithelial cells.
Synonyms:exact_synonym: collagen-containing ECM
 only_in_taxon: NCBITaxon:33208 ! Metazoa



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collagen-containing extracellular matrix term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A1BG alpha-1-B glycoprotein located_in HDA (PMID:27559042) BHF-UCL PMID:27559042 NCBI chr19:58,345,183...58,353,492
Ensembl chr19:58,345,178...58,353,492
JBrowse link
G A2M alpha-2-macroglobulin located_in HDA (PMID:25037231), (PMID:28327460), (PMID:28675934) BHF-UCL PMID:25037231 PMID:28327460 PMID:28675934 NCBI chr12:9,067,708...9,116,229
Ensembl chr12:9,067,664...9,116,229
JBrowse link
G ABI3BP ABI family member 3 binding protein located_in
is_active_in
HDA
IBA
(PMID:20551380), (PMID:27559042), (PMID:28675934) BHF-UCL
GO_Central
PMID:20551380 PMID:27559042 PMID:28675934 GO_REF:0000033 NCBI chr 3:100,749,156...100,993,421
Ensembl chr 3:100,749,156...100,993,515
JBrowse link
G ACAN aggrecan located_in HDA (PMID:20551380), (PMID:27068509) BHF-UCL PMID:20551380 PMID:27068509 NCBI chr15:88,803,436...88,875,353
Ensembl chr15:88,803,436...88,875,353
JBrowse link
G ADAM11 ADAM metallopeptidase domain 11 located_in ISS (PMID:22261194) BHF-UCL PMID:22261194 NCBI chr17:44,758,988...44,781,846
Ensembl chr17:44,758,988...44,781,846
JBrowse link
G ADAM19 ADAM metallopeptidase domain 19 located_in HDA (PMID:28344315) BHF-UCL PMID:28344315 NCBI chr 5:157,477,304...157,575,775
Ensembl chr 5:157,395,534...157,575,775
JBrowse link
G ADAMDEC1 ADAM like decysin 1 located_in HDA (PMID:25037231) BHF-UCL PMID:25037231 NCBI chr 8:24,384,285...24,406,013
Ensembl chr 8:24,384,285...24,406,013
JBrowse link
G ADAMTS1 ADAM metallopeptidase with thrombospondin type 1 motif 1 located_in ISO
HDA
(PMID:28327460) RGD
BHF-UCL
PMID:15777654 PMID:28327460 RGD:9681749 NCBI chr21:26,835,755...26,845,409
Ensembl chr21:26,835,755...26,845,409
JBrowse link
G ADAMTS10 ADAM metallopeptidase with thrombospondin type 1 motif 10 located_in IDA (PMID:21402694) UniProt PMID:21402694 NCBI chr19:8,580,240...8,610,715
Ensembl chr19:8,580,240...8,610,735
JBrowse link
G ADAMTS20 ADAM metallopeptidase with thrombospondin type 1 motif 20 located_in TAS (PMID:22261194) BHF-UCL PMID:22261194 NCBI chr12:43,352,763...43,552,203
Ensembl chr12:43,353,866...43,552,203
JBrowse link
G ADAMTS3 ADAM metallopeptidase with thrombospondin type 1 motif 3 located_in TAS (PMID:22261194) BHF-UCL PMID:22261194 NCBI chr 4:72,280,969...72,569,221
Ensembl chr 4:72,280,969...72,569,221
JBrowse link
G ADAMTS4 ADAM metallopeptidase with thrombospondin type 1 motif 4 located_in HDA (PMID:23658023) UniProt PMID:23658023 NCBI chr 1:161,184,302...161,199,054
Ensembl chr 1:161,184,302...161,199,054
JBrowse link
G ADAMTS8 ADAM metallopeptidase with thrombospondin type 1 motif 8 located_in ISS (PMID:22261194) BHF-UCL PMID:22261194 NCBI chr11:130,404,923...130,428,609
Ensembl chr11:130,404,923...130,428,609
JBrowse link
G ADAMTS9 ADAM metallopeptidase with thrombospondin type 1 motif 9 located_in ISS (PMID:22261194) BHF-UCL PMID:22261194 NCBI chr 3:64,515,654...64,688,000
Ensembl chr 3:64,515,654...64,688,000
JBrowse link
G ADAMTSL4 ADAMTS like 4 located_in HDA (PMID:25037231), (PMID:28327460) BHF-UCL PMID:25037231 PMID:28327460 NCBI chr 1:150,549,408...150,560,937
Ensembl chr 1:150,549,369...150,560,937
JBrowse link
G ADIPOQ adiponectin, C1Q and collagen domain containing located_in HDA (PMID:28675934) BHF-UCL PMID:28675934 NCBI chr 3:186,842,710...186,858,463
Ensembl chr 3:186,842,704...186,858,463
JBrowse link
G AEBP1 AE binding protein 1 located_in HDA (PMID:20551380), (PMID:25037231), (PMID:28327460), (PMID:28675934) BHF-UCL PMID:20551380 PMID:25037231 PMID:28327460 PMID:28675934 NCBI chr 7:44,104,345...44,114,560
Ensembl chr 7:44,104,345...44,114,562
JBrowse link
G AGRN agrin located_in IDA
TAS
HDA
(PMID:17628813)
(PMID:22261194)
(PMID:20551380), (PMID:23658023), (PMID:27068509), (PMID:27559042), (PMID:28675934)
UniProt
BHF-UCL
PMID:17628813 PMID:20551380 PMID:22261194 PMID:23658023 PMID:27068509 More... NCBI chr 1:1,020,120...1,056,116
Ensembl chr 1:1,020,120...1,056,119
JBrowse link
G AGT angiotensinogen located_in HDA (PMID:25037231) BHF-UCL PMID:25037231 NCBI chr 1:230,702,523...230,745,583
Ensembl chr 1:230,690,776...230,745,576
JBrowse link
G AHSG alpha 2-HS glycoprotein located_in ISO
HDA
(PMID:27559042) RGD
BHF-UCL
PMID:7794128 PMID:27559042 RGD:1626075 NCBI chr 3:186,613,060...186,621,318
Ensembl chr 3:186,613,060...186,621,318
JBrowse link
G AMBP alpha-1-microglobulin/bikunin precursor located_in HDA (PMID:25037231), (PMID:27559042), (PMID:28675934) BHF-UCL PMID:25037231 PMID:27559042 PMID:28675934 NCBI chr 9:114,060,127...114,078,300
Ensembl chr 9:114,060,127...114,078,328
JBrowse link
G AMELX amelogenin X-linked located_in
is_active_in
IDA
IBA
(PMID:2509010) BHF-UCL
GO_Central
PMID:2509010 GO_REF:0000033 NCBI chr  X:11,293,413...11,309,588
Ensembl chr  X:11,293,413...11,300,761
JBrowse link
G AMELY amelogenin Y-linked located_in
is_active_in
IC
IBA
(PMID:1734713) BHF-UCL
GO_Central
PMID:1734713 GO_REF:0000033 NCBI chr  Y:6,865,918...6,911,752
Ensembl chr  Y:6,865,918...6,911,752
JBrowse link
G ANGPT1 angiopoietin 1 is_active_in IBA GO_Central GO_REF:0000033 NCBI chr 8:107,249,482...107,497,918
Ensembl chr 8:107,249,482...107,498,055
JBrowse link
G ANGPT2 angiopoietin 2 is_active_in IBA GO_Central GO_REF:0000033 NCBI chr 8:6,499,632...6,563,245
Ensembl chr 8:6,499,632...6,563,409
JBrowse link
G ANGPT4 angiopoietin 4 is_active_in IBA GO_Central GO_REF:0000033 NCBI chr20:869,900...916,334
Ensembl chr20:869,900...916,334
JBrowse link
G ANGPTL1 angiopoietin like 1 is_active_in IBA GO_Central GO_REF:0000033 NCBI chr 1:178,849,535...178,871,077
Ensembl chr 1:178,849,535...178,871,077
JBrowse link
G ANGPTL2 angiopoietin like 2 located_in
is_active_in
HDA
IBA
(PMID:28675934) BHF-UCL
GO_Central
PMID:28675934 GO_REF:0000033 NCBI chr 9:127,087,348...127,122,635
Ensembl chr 9:127,087,348...127,122,635
JBrowse link
G ANGPTL3 angiopoietin like 3 is_active_in IBA GO_Central GO_REF:0000033 NCBI chr 1:62,597,520...62,606,313
Ensembl chr 1:62,597,520...62,606,313
JBrowse link
G ANGPTL4 angiopoietin like 4 is_active_in IBA GO_Central GO_REF:0000033 NCBI chr19:8,364,155...8,374,370
Ensembl chr19:8,363,289...8,374,370
JBrowse link
G ANGPTL5 angiopoietin like 5 is_active_in IBA GO_Central GO_REF:0000033 NCBI chr11:101,890,674...101,916,522
Ensembl chr11:101,890,674...101,916,522
JBrowse link
G ANGPTL6 angiopoietin like 6 located_in
is_active_in
HDA
IBA
(PMID:25037231) BHF-UCL
GO_Central
PMID:25037231 GO_REF:0000033 NCBI chr19:10,092,338...10,106,190
Ensembl chr19:10,092,338...10,102,678
JBrowse link
G ANGPTL7 angiopoietin like 7 is_active_in IBA GO_Central GO_REF:0000033 NCBI chr 1:11,189,355...11,195,981
Ensembl chr 1:11,189,355...11,195,981
JBrowse link
G ANXA1 annexin A1 located_in HDA (PMID:25037231), (PMID:28344315), (PMID:28675934) BHF-UCL PMID:25037231 PMID:28344315 PMID:28675934 NCBI chr 9:73,151,865...73,170,393
Ensembl chr 9:73,151,865...73,170,629
JBrowse link
G ANXA11 annexin A11 located_in HDA (PMID:25037231), (PMID:28344315) BHF-UCL PMID:25037231 PMID:28344315 NCBI chr10:80,150,889...80,205,808
Ensembl chr10:80,150,889...80,205,572
JBrowse link
G ANXA2 annexin A2 located_in ISS
HDA
(PMID:22261194)
(PMID:25037231), (PMID:27559042), (PMID:28327460), (PMID:28675934)
BHF-UCL PMID:22261194 PMID:25037231 PMID:27559042 PMID:28327460 PMID:28675934 NCBI chr15:60,347,151...60,397,986
Ensembl chr15:60,347,134...60,402,883
JBrowse link
G ANXA4 annexin A4 located_in HDA (PMID:25037231), (PMID:28675934) BHF-UCL PMID:25037231 PMID:28675934 NCBI chr 2:69,643,808...69,827,112
Ensembl chr 2:69,644,425...69,827,112
JBrowse link
G ANXA5 annexin A5 located_in HDA (PMID:28327460), (PMID:28675934) BHF-UCL PMID:28327460 PMID:28675934 NCBI chr 4:121,667,946...121,696,980
Ensembl chr 4:121,667,946...121,696,995
JBrowse link
G ANXA6 annexin A6 located_in HDA (PMID:25037231), (PMID:28327460), (PMID:28344315), (PMID:28675934) BHF-UCL PMID:25037231 PMID:28327460 PMID:28344315 PMID:28675934 NCBI chr 5:151,100,706...151,157,779
Ensembl chr 5:151,100,706...151,157,815
JBrowse link
G ANXA7 annexin A7 located_in HDA (PMID:25037231) BHF-UCL PMID:25037231 NCBI chr10:73,375,101...73,414,058
Ensembl chr10:73,375,101...73,414,076
JBrowse link
G ANXA8 annexin A8 located_in HDA (PMID:28675934) BHF-UCL PMID:28675934 NCBI chr10:47,467,993...47,991,796
Ensembl chr10:47,460,162...47,484,158
JBrowse link
G ANXA8L1 annexin A8 like 1 located_in HDA (PMID:28675934) BHF-UCL PMID:28675934 NCBI chr10:46,375,776...46,391,778
Ensembl chr10:46,375,627...46,391,784
JBrowse link
G APCS amyloid P component, serum located_in HDA (PMID:20551380), (PMID:27559042) BHF-UCL PMID:20551380 PMID:27559042 NCBI chr 1:159,587,826...159,588,865
Ensembl chr 1:159,587,826...159,588,865
JBrowse link
G APOA1 apolipoprotein A1 located_in HDA (PMID:27559042) BHF-UCL PMID:27559042 NCBI chr11:116,835,751...116,837,622
Ensembl chr11:116,835,751...116,837,622
JBrowse link
G APOA4 apolipoprotein A4 located_in HDA (PMID:27559042) BHF-UCL PMID:27559042 NCBI chr11:116,820,700...116,823,304
Ensembl chr11:116,820,700...116,823,304
JBrowse link
G APOC3 apolipoprotein C3 located_in HDA (PMID:27068509), (PMID:27559042) BHF-UCL PMID:27068509 PMID:27559042 NCBI chr11:116,829,907...116,833,072
Ensembl chr11:116,829,706...116,833,072
JBrowse link
G APOE apolipoprotein E located_in HDA (PMID:23658023), (PMID:27559042) BHF-UCL PMID:23658023 PMID:27559042 NCBI chr19:44,905,796...44,909,393
Ensembl chr19:44,905,791...44,909,393
JBrowse link
G APOH apolipoprotein H located_in HDA (PMID:20551380), (PMID:27559042) BHF-UCL PMID:20551380 PMID:27559042 NCBI chr17:66,212,033...66,229,415
Ensembl chr17:66,212,033...66,256,525
JBrowse link
G ASPN asporin located_in HDA (PMID:20551380), (PMID:25037231), (PMID:27068509), (PMID:27559042), (PMID:28675934) BHF-UCL PMID:20551380 PMID:25037231 PMID:27068509 PMID:27559042 PMID:28675934 NCBI chr 9:92,456,205...92,482,506
Ensembl chr 9:92,456,205...92,482,506
JBrowse link
G AZGP1 alpha-2-glycoprotein 1, zinc-binding located_in HDA (PMID:27559042) BHF-UCL PMID:27559042 NCBI chr 7:99,966,730...99,976,031
Ensembl chr 7:99,966,720...99,976,042
JBrowse link
G BCAM basal cell adhesion molecule (Lutheran blood group) located_in HDA (PMID:27559042) BHF-UCL PMID:27559042 NCBI chr19:44,809,059...44,821,421
Ensembl chr19:44,809,071...44,821,421
JBrowse link
G BGLAP bone gamma-carboxyglutamate protein located_in ISO (PMID:8101026), (PMID:8218200) CAFA PMID:8101026 PMID:8218200 NCBI chr 1:156,242,184...156,243,317
Ensembl chr 1:156,242,184...156,243,317
JBrowse link
G BGN biglycan located_in ISS
HDA
(PMID:22261194)
(PMID:20551380), (PMID:25037231), (PMID:27559042), (PMID:28327460), (PMID:28675934)
BHF-UCL PMID:20551380 PMID:22261194 PMID:25037231 PMID:27559042 PMID:28327460 More... NCBI chr  X:153,494,980...153,509,546
Ensembl chr  X:153,494,980...153,509,546
JBrowse link
G BMP7 bone morphogenetic protein 7 ISO RGD PMID:9626398 RGD:2289041 NCBI chr20:57,168,753...57,266,641
Ensembl chr20:57,168,753...57,266,641
JBrowse link
G C17orf58 chromosome 17 open reading frame 58 located_in HDA (PMID:25037231) BHF-UCL PMID:25037231 NCBI chr17:67,991,099...67,996,469
Ensembl chr17:67,991,099...67,996,469
JBrowse link
G C1QA complement C1q A chain located_in HDA (PMID:28675934) BHF-UCL PMID:28675934 NCBI chr 1:22,636,463...22,639,678
Ensembl chr 1:22,635,077...22,639,678
JBrowse link
G C1QB complement C1q B chain located_in HDA (PMID:25037231), (PMID:28675934) BHF-UCL PMID:25037231 PMID:28675934 NCBI chr 1:22,653,236...22,661,637
Ensembl chr 1:22,652,762...22,661,637
JBrowse link
G C1QC complement C1q C chain located_in HDA (PMID:25037231), (PMID:28344315), (PMID:28675934) BHF-UCL PMID:25037231 PMID:28344315 PMID:28675934 NCBI chr 1:22,643,633...22,648,108
Ensembl chr 1:22,643,014...22,648,110
JBrowse link
G CALR calreticulin ISO RGD PMID:12782144 RGD:2326184 NCBI chr19:12,938,609...12,944,489
Ensembl chr19:12,938,578...12,944,489
JBrowse link
G CBLN1 cerebellin 1 precursor located_in HDA (PMID:25037231) BHF-UCL PMID:25037231 NCBI chr16:49,277,917...49,281,838
Ensembl chr16:49,277,917...49,281,838
JBrowse link
G CBLN4 cerebellin 4 precursor located_in HDA (PMID:25037231) BHF-UCL PMID:25037231 NCBI chr20:55,997,357...56,005,519
Ensembl chr20:55,997,357...56,005,519
JBrowse link
G CCN1 cellular communication network factor 1 located_in HDA (PMID:23658023), (PMID:28327460) BHF-UCL PMID:23658023 PMID:28327460 NCBI chr 1:85,580,761...85,583,950
Ensembl chr 1:85,580,761...85,584,589
JBrowse link
G CCN2 cellular communication network factor 2 located_in HDA (PMID:28327460) BHF-UCL PMID:28327460 NCBI chr 6:131,948,176...131,951,372
Ensembl chr 6:131,948,176...131,951,372
JBrowse link
G CCN3 cellular communication network factor 3 ISO RGD PMID:19286457 RGD:2306292 NCBI chr 8:119,416,446...119,424,434
Ensembl chr 8:119,416,446...119,424,434
JBrowse link
G CDH13 cadherin 13 located_in HDA (PMID:27559042) BHF-UCL PMID:27559042 NCBI chr16:82,626,969...83,800,640
Ensembl chr16:82,626,965...83,800,640
JBrowse link
G CDH2 cadherin 2 located_in HDA (PMID:27559042) BHF-UCL PMID:27559042 NCBI chr18:27,932,879...28,177,130
Ensembl chr18:27,932,879...28,177,946
JBrowse link
G CDON cell adhesion associated, oncogene regulated located_in TAS (PMID:22261194) BHF-UCL PMID:22261194 NCBI chr11:125,956,821...126,063,352
Ensembl chr11:125,955,796...126,063,335
JBrowse link
G CFP complement factor properdin located_in HDA (PMID:20551380) BHF-UCL PMID:20551380 NCBI chr  X:47,623,282...47,630,305
Ensembl chr  X:47,623,172...47,630,305
JBrowse link
G CHADL chondroadherin like located_in IDA (PMID:25451920) UniProt PMID:25451920 NCBI chr22:41,229,513...41,240,931
Ensembl chr22:41,229,510...41,240,931
JBrowse link
G CILP cartilage intermediate layer protein located_in
is_active_in
HDA
IBA
IDA
(PMID:27068509), (PMID:27559042)
(PMID:9722583)
BHF-UCL
GO_Central
PMID:9722583 PMID:27068509 PMID:27559042 GO_REF:0000033 NCBI chr15:65,194,760...65,211,473
Ensembl chr15:65,194,760...65,211,473
JBrowse link
G CLC Charcot-Leyden crystal galectin located_in HDA (PMID:28344315) BHF-UCL PMID:28344315 NCBI chr19:39,731,255...39,738,029
Ensembl chr19:39,731,255...39,738,029
JBrowse link
G CLEC14A C-type lectin domain containing 14A located_in HDA (PMID:23979707) BHF-UCL PMID:23979707 NCBI chr14:38,254,000...38,256,093
Ensembl chr14:38,254,000...38,256,093
JBrowse link
G CLEC3B C-type lectin domain family 3 member B located_in HDA
ISS
(PMID:28675934)
(PMID:22261194)
BHF-UCL PMID:22261194 PMID:28675934 NCBI chr 3:45,026,303...45,036,071
Ensembl chr 3:45,001,548...45,036,071
JBrowse link
G CLU clusterin located_in HDA (PMID:20551380), (PMID:23658023), (PMID:27559042) BHF-UCL PMID:20551380 PMID:23658023 PMID:27559042 NCBI chr 8:27,596,917...27,614,700
Ensembl chr 8:27,596,917...27,614,700
JBrowse link
G CMA1 chymase 1 located_in HDA (PMID:20551380), (PMID:27559042) BHF-UCL PMID:20551380 PMID:27559042 NCBI chr14:24,505,353...24,508,265
Ensembl chr14:24,505,353...24,508,265
JBrowse link
G COCH cochlin located_in
is_active_in
IDA
IBA
(PMID:22610276) UniProt
GO_Central
PMID:22610276 GO_REF:0000033 NCBI chr14:30,874,559...30,895,615
Ensembl chr14:30,874,514...30,895,065
JBrowse link
G COL10A1 collagen type X alpha 1 chain is_active_in
located_in
ISO
IBA
HDA
(PMID:25037231), (PMID:28344315) RGD
GO_Central
BHF-UCL
PMID:7649371 PMID:25037231 PMID:28344315 GO_REF:0000033 RGD:1298775 NCBI chr 6:116,118,909...116,217,144
Ensembl chr 6:116,118,909...116,158,747
JBrowse link
G COL11A1 collagen type XI alpha 1 chain is_active_in
located_in
ISO
IBA
HDA
(PMID:28327460), (PMID:28675934) RGD
GO_Central
BHF-UCL
PMID:17062562 PMID:28327460 PMID:28675934 GO_REF:0000033 RGD:1600882 NCBI chr 1:102,876,473...103,108,522
Ensembl chr 1:102,876,467...103,108,872
JBrowse link
G COL11A2 collagen type XI alpha 2 chain located_in
is_active_in
HDA
IBA
(PMID:28344315), (PMID:28675934) BHF-UCL
GO_Central
PMID:28344315 PMID:28675934 GO_REF:0000033 NCBI chr 6:33,162,694...33,193,519
Ensembl chr 6:33,162,681...33,192,499
JBrowse link
G COL12A1 collagen type XII alpha 1 chain located_in HDA (PMID:20551380), (PMID:23658023), (PMID:23979707), (PMID:25037231), (PMID:28327460), (PMID:28675934) UniProt PMID:20551380 PMID:23658023 PMID:23979707 PMID:25037231 PMID:28327460 More... NCBI chr 6:75,084,326...75,206,053
Ensembl chr 6:75,084,326...75,206,267
JBrowse link
G COL13A1 collagen type XIII alpha 1 chain located_in HDA (PMID:25037231), (PMID:28675934) BHF-UCL PMID:25037231 PMID:28675934 NCBI chr10:69,801,906...69,959,144
Ensembl chr10:69,801,880...69,964,275
JBrowse link
G COL14A1 collagen type XIV alpha 1 chain located_in HDA
ISS
(PMID:20551380), (PMID:25037231), (PMID:28327460), (PMID:28675934)
(PMID:22261194)
BHF-UCL PMID:20551380 PMID:22261194 PMID:25037231 PMID:28327460 PMID:28675934 NCBI chr 8:120,124,454...120,373,573
Ensembl chr 8:120,059,780...120,373,573
JBrowse link
G COL15A1 collagen type XV alpha 1 chain located_in HDA
ISS
(PMID:20551380), (PMID:25037231), (PMID:27068509), (PMID:27559042), (PMID:28675934)
(PMID:22261194)
BHF-UCL PMID:20551380 PMID:22261194 PMID:25037231 PMID:27068509 PMID:27559042 More... NCBI chr 9:98,943,907...99,070,787
Ensembl chr 9:98,943,179...99,070,787
JBrowse link
G COL16A1 collagen type XVI alpha 1 chain located_in HDA (PMID:25037231), (PMID:27068509), (PMID:28327460), (PMID:28344315), (PMID:28675934) BHF-UCL PMID:25037231 PMID:27068509 PMID:28327460 PMID:28344315 PMID:28675934 NCBI chr 1:31,652,263...31,704,017
Ensembl chr 1:31,652,263...31,704,319
JBrowse link
G COL17A1 collagen type XVII alpha 1 chain located_in
is_active_in
HDA
IBA
(PMID:25037231), (PMID:28344315) BHF-UCL
GO_Central
PMID:25037231 PMID:28344315 GO_REF:0000033 NCBI chr10:104,031,286...104,085,880
Ensembl chr10:104,031,286...104,085,880
JBrowse link
G COL18A1 collagen type XVIII alpha 1 chain located_in
is_active_in
TAS
IBA
HDA
(PMID:22261194)
(PMID:20551380), (PMID:23658023), (PMID:23979707), (PMID:25037231), (PMID:27559042), (PMID:28675934)
BHF-UCL
GO_Central
PMID:20551380 PMID:22261194 PMID:23658023 PMID:23979707 PMID:25037231 More... GO_REF:0000033 NCBI chr21:45,405,165...45,513,720
Ensembl chr21:45,405,165...45,513,720
JBrowse link
G COL19A1 collagen type XIX alpha 1 chain located_in
is_active_in
HDA
IBA
(PMID:25037231) BHF-UCL
GO_Central
PMID:25037231 GO_REF:0000033 NCBI chr 6:69,866,556...70,212,468
Ensembl chr 6:69,866,556...70,212,468
JBrowse link
G COL1A1 collagen type I alpha 1 chain located_in ISS
HDA
(PMID:22261194)
(PMID:20551380), (PMID:23658023), (PMID:25037231), (PMID:27559042), (PMID:28327460), (PMID:28344315), (PMID:28675934)
BHF-UCL PMID:20551380 PMID:22261194 PMID:23658023 PMID:25037231 PMID:27559042 More... NCBI chr17:50,184,101...50,201,631
Ensembl chr17:50,184,101...50,201,632
JBrowse link
G COL1A2 collagen type I alpha 2 chain located_in
is_active_in
HDA
IBA
(PMID:20551380), (PMID:23658023), (PMID:25037231), (PMID:27559042), (PMID:28327460), (PMID:28344315), (PMID:28675934) BHF-UCL
GO_Central
PMID:20551380 PMID:23658023 PMID:25037231 PMID:27559042 PMID:28327460 More... GO_REF:0000033 NCBI chr 7:94,394,895...94,431,227
Ensembl chr 7:94,394,895...94,431,227
JBrowse link
G COL20A1 collagen type XX alpha 1 chain located_in TAS (PMID:22261194) BHF-UCL PMID:22261194 NCBI chr20:63,293,186...63,334,806
Ensembl chr20:63,293,186...63,334,851
JBrowse link
G COL21A1 collagen type XXI alpha 1 chain located_in
is_active_in
HDA
IBA
(PMID:20551380), (PMID:25037231), (PMID:28675934) BHF-UCL
GO_Central
PMID:20551380 PMID:25037231 PMID:28675934 GO_REF:0000033 NCBI chr 6:56,056,590...56,394,128
Ensembl chr 6:56,056,590...56,394,094
JBrowse link
G COL23A1 collagen type XXIII alpha 1 chain located_in
is_active_in
HDA
IBA
(PMID:25037231) BHF-UCL
GO_Central
PMID:25037231 GO_REF:0000033 NCBI chr 5:178,237,618...178,590,393
Ensembl chr 5:178,237,476...178,590,393
JBrowse link
G COL24A1 collagen type XXIV alpha 1 chain located_in HDA (PMID:25037231), (PMID:28675934) BHF-UCL PMID:25037231 PMID:28675934 NCBI chr 1:85,729,233...86,156,984
Ensembl chr 1:85,729,233...86,156,943
JBrowse link
G COL25A1 collagen type XXV alpha 1 chain located_in HDA (PMID:25037231) BHF-UCL PMID:25037231 NCBI chr 4:108,808,725...109,302,658
Ensembl chr 4:108,808,725...109,302,752
JBrowse link
G COL26A1 collagen type XXVI alpha 1 chain located_in HDA (PMID:23658023) UniProt PMID:23658023 NCBI chr 7:101,362,388...101,559,024
Ensembl chr 7:101,362,875...101,559,024
JBrowse link
G COL27A1 collagen type XXVII alpha 1 chain located_in
is_active_in
HDA
IBA
(PMID:28344315) BHF-UCL
GO_Central
PMID:28344315 GO_REF:0000033 NCBI chr 9:114,154,098...114,312,511
Ensembl chr 9:114,155,537...114,312,511
JBrowse link
G COL28A1 collagen type XXVIII alpha 1 chain located_in
is_active_in
HDA
IBA
(PMID:25037231), (PMID:27559042), (PMID:28675934) BHF-UCL
GO_Central
PMID:25037231 PMID:27559042 PMID:28675934 GO_REF:0000033 NCBI chr 7:7,338,194...7,543,870
Ensembl chr 7:7,356,203...7,535,873
JBrowse link
G COL2A1 collagen type II alpha 1 chain is_active_in
located_in
ISO
IBA
HDA
(PMID:23658023), (PMID:27559042), (PMID:28327460), (PMID:28344315), (PMID:28675934) RGD
GO_Central
BHF-UCL
PMID:7649371 PMID:23658023 PMID:27559042 PMID:28327460 PMID:28344315 More... GO_REF:0000033 RGD:1298775 NCBI chr12:47,972,967...48,006,212
Ensembl chr12:47,972,967...48,004,554
JBrowse link
G COL3A1 collagen type III alpha 1 chain is_active_in
located_in
ISO
IBA
TAS
HDA
IMP
(PMID:22261194)
(PMID:25037231), (PMID:27559042), (PMID:28327460), (PMID:28344315), (PMID:28675934)
(PMID:14970208), (PMID:7487954)
RGD
GO_Central
BHF-UCL
UniProt
PMID:7487954 PMID:14970208 PMID:20610530 PMID:22261194 PMID:25037231 More... GO_REF:0000033 RGD:7257557 NCBI chr 2:188,974,373...189,012,746
Ensembl chr 2:188,974,373...189,012,746
JBrowse link
G COL4A1 collagen type IV alpha 1 chain located_in
is_active_in
HDA
IBA
ISS
(PMID:23658023), (PMID:23979707), (PMID:25037231), (PMID:27068509), (PMID:27559042), (PMID:28327460), (PMID:28344315), (PMID:28675934)
(PMID:22261194)
BHF-UCL
GO_Central
PMID:22261194 PMID:23658023 PMID:23979707 PMID:25037231 PMID:27068509 More... GO_REF:0000033 NCBI chr13:110,148,963...110,307,157
Ensembl chr13:110,148,963...110,307,202
JBrowse link
G COL4A2 collagen type IV alpha 2 chain located_in
is_active_in
ISS
IBA
TAS
HDA
(PMID:22261194)
(PMID:20551380), (PMID:23658023), (PMID:23979707), (PMID:25037231), (PMID:27068509), (PMID:27559042), (PMID:28327460), (PMID:28344315), (PMID:28675934)
BHF-UCL
GO_Central
PMID:20551380 PMID:22261194 PMID:23658023 PMID:23979707 PMID:25037231 More... GO_REF:0000033 NCBI chr13:110,307,284...110,513,209
Ensembl chr13:110,305,812...110,513,209
JBrowse link
G COL4A3 collagen type IV alpha 3 chain located_in HDA (PMID:25037231), (PMID:28344315), (PMID:28675934) BHF-UCL PMID:25037231 PMID:28344315 PMID:28675934 NCBI chr 2:227,164,624...227,314,792
Ensembl chr 2:227,164,624...227,314,792
JBrowse link
G COL4A4 collagen type IV alpha 4 chain located_in
is_active_in
HDA
IBA
(PMID:25037231) BHF-UCL
GO_Central
PMID:25037231 GO_REF:0000033 NCBI chr 2:226,967,360...227,164,488
Ensembl chr 2:227,002,714...227,164,453
JBrowse link
G COL4A5 collagen type IV alpha 5 chain located_in
is_active_in
HDA
IBA
(PMID:28344315), (PMID:28675934) BHF-UCL
GO_Central
PMID:28344315 PMID:28675934 GO_REF:0000033 NCBI chr  X:108,439,838...108,697,545
Ensembl chr  X:108,439,838...108,697,545
JBrowse link
G COL4A6 collagen type IV alpha 6 chain located_in
is_active_in
HDA
IBA
(PMID:25037231), (PMID:28344315), (PMID:28675934) BHF-UCL
GO_Central
PMID:25037231 PMID:28344315 PMID:28675934 GO_REF:0000033 NCBI chr  X:108,155,614...108,439,458
Ensembl chr  X:108,155,607...108,439,497
JBrowse link
G COL5A1 collagen type V alpha 1 chain located_in
is_active_in
IMP
IBA
HDA
(PMID:14970208)
(PMID:20551380), (PMID:25037231), (PMID:27559042), (PMID:28327460), (PMID:28344315), (PMID:28675934)
UniProt
GO_Central
BHF-UCL
PMID:14970208 PMID:20551380 PMID:25037231 PMID:27559042 PMID:28327460 More... GO_REF:0000033 NCBI chr 9:134,641,803...134,844,843
Ensembl chr 9:134,641,803...134,844,843
JBrowse link
G COL5A2 collagen type V alpha 2 chain located_in
is_active_in
HDA
IBA
(PMID:25037231), (PMID:27068509), (PMID:27559042), (PMID:28327460), (PMID:28344315), (PMID:28675934) BHF-UCL
GO_Central
PMID:25037231 PMID:27068509 PMID:27559042 PMID:28327460 PMID:28344315 More... GO_REF:0000033 NCBI chr 2:189,031,898...189,441,111
Ensembl chr 2:189,031,898...189,225,312
JBrowse link
G COL5A3 collagen type V alpha 3 chain is_active_in
located_in
ISO
IBA
HDA
(PMID:27559042), (PMID:28344315), (PMID:28675934) RGD
GO_Central
BHF-UCL
PMID:15383532 PMID:27559042 PMID:28344315 PMID:28675934 GO_REF:0000033 RGD:5683638 NCBI chr19:9,959,561...10,010,504
Ensembl chr19:9,959,561...10,010,504
JBrowse link
G COL6A1 collagen type VI alpha 1 chain located_in
is_active_in
ISS
IBA
HDA
(PMID:22261194)
(PMID:20551380), (PMID:23658023), (PMID:25037231), (PMID:27559042), (PMID:28327460), (PMID:28675934)
BHF-UCL
GO_Central
PMID:20551380 PMID:22261194 PMID:23658023 PMID:25037231 PMID:27559042 More... GO_REF:0000033 NCBI chr21:45,981,770...46,005,048
Ensembl chr21:45,981,770...46,005,050
JBrowse link
G COL6A2 collagen type VI alpha 2 chain located_in
is_active_in
HDA
IBA
ISS
(PMID:20551380), (PMID:23658023), (PMID:25037231), (PMID:27559042), (PMID:28327460), (PMID:28344315), (PMID:28675934)
(PMID:22261194)
BHF-UCL
GO_Central
PMID:20551380 PMID:22261194 PMID:23658023 PMID:25037231 PMID:27559042 More... GO_REF:0000033 NCBI chr21:46,098,112...46,132,848
Ensembl chr21:46,098,112...46,132,848
JBrowse link
G COL6A3 collagen type VI alpha 3 chain located_in ISS
HDA
(PMID:22261194)
(PMID:20551380), (PMID:23658023), (PMID:25037231), (PMID:27559042), (PMID:28327460), (PMID:28675934)
BHF-UCL PMID:20551380 PMID:22261194 PMID:23658023 PMID:25037231 PMID:27559042 More... NCBI chr 2:237,324,018...237,414,164
Ensembl chr 2:237,324,003...237,414,328
JBrowse link
G COL6A5 collagen type VI alpha 5 chain located_in
is_active_in
HDA
IBA
ISS
(PMID:28344315), (PMID:28675934)
(PMID:22261194)
BHF-UCL
GO_Central
PMID:22261194 PMID:28344315 PMID:28675934 GO_REF:0000033 NCBI chr 3:130,345,672...130,484,846
Ensembl chr 3:130,345,516...130,484,846
JBrowse link
G COL6A6 collagen type VI alpha 6 chain located_in
is_active_in
HDA
IBA
(PMID:25037231), (PMID:27559042), (PMID:28675934) BHF-UCL
GO_Central
PMID:25037231 PMID:27559042 PMID:28675934 GO_REF:0000033 NCBI chr 3:130,516,720...130,677,042
Ensembl chr 3:130,517,177...130,677,044
JBrowse link
G COL7A1 collagen type VII alpha 1 chain located_in HDA
ISS
(PMID:25037231), (PMID:28344315), (PMID:28675934)
(PMID:22261194)
BHF-UCL PMID:22261194 PMID:25037231 PMID:28344315 PMID:28675934 NCBI chr 3:48,564,073...48,595,329
Ensembl chr 3:48,564,073...48,595,329
JBrowse link
G COL8A1 collagen type VIII alpha 1 chain located_in
is_active_in
HDA
IBA
(PMID:20551380), (PMID:23979707), (PMID:25037231), (PMID:27068509), (PMID:27559042), (PMID:28327460), (PMID:28675934) BHF-UCL
GO_Central
PMID:20551380 PMID:23979707 PMID:25037231 PMID:27068509 PMID:27559042 More... GO_REF:0000033 NCBI chr 3:99,638,594...99,799,217
Ensembl chr 3:99,638,475...99,799,226
JBrowse link
G COL8A2 collagen type VIII alpha 2 chain located_in
is_active_in
HDA
IBA
(PMID:20551380), (PMID:25037231), (PMID:28675934) BHF-UCL
GO_Central
PMID:20551380 PMID:25037231 PMID:28675934 GO_REF:0000033 NCBI chr 1:36,095,239...36,125,222
Ensembl chr 1:36,095,239...36,125,222
JBrowse link
G COL9A1 collagen type IX alpha 1 chain located_in
is_active_in
HDA
IBA
(PMID:25037231) BHF-UCL
GO_Central
PMID:25037231 GO_REF:0000033 NCBI chr 6:70,215,061...70,303,084
Ensembl chr 6:70,216,040...70,303,084
JBrowse link
G COL9A2 collagen type IX alpha 2 chain located_in
is_active_in
HDA
IBA
(PMID:25037231) BHF-UCL
GO_Central
PMID:25037231 GO_REF:0000033 NCBI chr 1:40,300,489...40,317,286
Ensembl chr 1:40,300,489...40,317,813
JBrowse link
G COL9A3 collagen type IX alpha 3 chain located_in HDA (PMID:25037231) BHF-UCL PMID:25037231 NCBI chr20:62,816,213...62,841,159
Ensembl chr20:62,816,244...62,841,159
JBrowse link
G COLEC12 collectin subfamily member 12 is_active_in IBA GO_Central GO_REF:0000033 NCBI chr18:316,737...500,701
Ensembl chr18:316,737...500,722
JBrowse link
G COLQ collagen like tail subunit of asymmetric acetylcholinesterase located_in
is_active_in
HDA
IBA
(PMID:25037231) BHF-UCL
GO_Central
PMID:25037231 GO_REF:0000033 NCBI chr 3:15,450,133...15,521,706
Ensembl chr 3:15,450,133...15,521,751
JBrowse link
G COMP cartilage oligomeric matrix protein is_active_in
located_in
ISO
IBA
HDA
(PMID:20551380) RGD
GO_Central
BHF-UCL
PMID:16778685 PMID:20551380 GO_REF:0000033 RGD:1600712 NCBI chr19:18,782,773...18,791,305
Ensembl chr19:18,782,773...18,791,305
JBrowse link
G CPA3 carboxypeptidase A3 located_in HDA (PMID:27559042) BHF-UCL PMID:27559042 NCBI chr 3:148,865,296...148,897,203
Ensembl chr 3:148,865,296...148,897,203
JBrowse link
G CRELD1 cysteine rich with EGF like domains 1 located_in HDA (PMID:28675934) BHF-UCL PMID:28675934 NCBI chr 3:9,933,834...9,945,406
Ensembl chr 3:9,933,793...9,945,413
JBrowse link
G CSPG4 chondroitin sulfate proteoglycan 4 located_in HDA (PMID:27068509), (PMID:28675934) BHF-UCL PMID:27068509 PMID:28675934 NCBI chr15:75,674,322...75,713,466
Ensembl chr15:75,674,322...75,712,848
JBrowse link
G CSTB cystatin B located_in HDA (PMID:25037231), (PMID:28675934) BHF-UCL PMID:25037231 PMID:28675934 NCBI chr21:43,773,950...43,776,308
Ensembl chr21:43,772,511...43,776,330
JBrowse link
G CTHRC1 collagen triple helix repeat containing 1 located_in HDA (PMID:28675934) BHF-UCL PMID:28675934 NCBI chr 8:103,371,538...103,382,989
Ensembl chr 8:103,371,538...103,382,989
JBrowse link
G CTSB cathepsin B located_in HDA (PMID:25037231), (PMID:28327460), (PMID:28344315), (PMID:28675934) BHF-UCL PMID:25037231 PMID:28327460 PMID:28344315 PMID:28675934 NCBI chr 8:11,842,524...11,868,087
Ensembl chr 8:11,842,524...11,869,533
JBrowse link
G CTSC cathepsin C located_in HDA (PMID:28344315) BHF-UCL PMID:28344315 NCBI chr11:88,293,592...88,337,736
Ensembl chr11:88,265,069...88,359,684
JBrowse link
G CTSD cathepsin D located_in HDA (PMID:20551380), (PMID:25037231), (PMID:28344315), (PMID:28675934) BHF-UCL PMID:20551380 PMID:25037231 PMID:28344315 PMID:28675934 NCBI chr11:1,752,755...1,763,927
Ensembl chr11:1,752,752...1,764,573
JBrowse link
G CTSF cathepsin F located_in HDA (PMID:25037231) BHF-UCL PMID:25037231 NCBI chr11:66,563,464...66,568,606
Ensembl chr11:66,563,464...66,568,879
JBrowse link
G CTSG cathepsin G located_in HDA (PMID:20551380), (PMID:25037231), (PMID:27559042), (PMID:28344315), (PMID:28675934) BHF-UCL PMID:20551380 PMID:25037231 PMID:27559042 PMID:28344315 PMID:28675934 NCBI chr14:24,573,518...24,576,250
Ensembl chr14:24,573,518...24,576,250
JBrowse link
G CTSH cathepsin H located_in HDA (PMID:25037231) BHF-UCL PMID:25037231 NCBI chr15:78,921,058...78,945,046
Ensembl chr15:78,921,058...78,949,574
JBrowse link
G CTSL cathepsin L located_in HDA (PMID:25037231) BHF-UCL PMID:25037231 NCBI chr 9:87,726,119...87,731,469
Ensembl chr 9:87,724,051...87,731,469
JBrowse link
G CTSS cathepsin S located_in HDA (PMID:25037231), (PMID:28344315) BHF-UCL PMID:25037231 PMID:28344315 NCBI chr 1:150,730,188...150,765,778
Ensembl chr 1:150,730,079...150,765,957
JBrowse link
G CTSZ cathepsin Z located_in HDA (PMID:25037231), (PMID:28344315) BHF-UCL PMID:25037231 PMID:28344315 NCBI chr20:58,995,185...59,007,254
Ensembl chr20:58,985,686...59,008,238
JBrowse link
G CXCL12 C-X-C motif chemokine ligand 12 located_in HDA (PMID:25037231) BHF-UCL PMID:25037231 NCBI chr10:44,370,165...44,385,097
Ensembl chr10:44,370,165...44,386,493
JBrowse link
G DAG1 dystroglycan 1 located_in HDA (PMID:27559042) BHF-UCL PMID:27559042 NCBI chr 3:49,468,948...49,535,615
Ensembl chr 3:49,468,713...49,535,618
JBrowse link
G DCN decorin located_in HDA
ISS
(PMID:20551380), (PMID:25037231), (PMID:27559042), (PMID:28327460), (PMID:28675934)
(PMID:22261194)
BHF-UCL PMID:20551380 PMID:22261194 PMID:25037231 PMID:27559042 PMID:28327460 More... NCBI chr12:91,140,484...91,182,817
Ensembl chr12:91,140,484...91,183,217
JBrowse link
G DEFA1 defensin alpha 1 located_in HDA (PMID:20551380), (PMID:27559042) BHF-UCL PMID:20551380 PMID:27559042 NCBI chr 8:6,977,649...6,980,092
Ensembl chr 8:6,977,649...6,980,092
JBrowse link
G DEFA1B defensin alpha 1B located_in HDA (PMID:20551380), (PMID:27559042) BHF-UCL PMID:20551380 PMID:27559042 NCBI chr 8:6,996,766...6,999,198
Ensembl chr 8:6,996,766...6,999,198
JBrowse link
G DMBT1 deleted in malignant brain tumors 1 ISO RGD PMID:11121438 RGD:1599784 NCBI chr10:122,560,754...122,643,736
Ensembl chr10:122,560,665...122,643,736
JBrowse link
G DPT dermatopontin located_in ISS
HDA
(PMID:22261194)
(PMID:20551380), (PMID:25037231), (PMID:27068509), (PMID:27559042), (PMID:28675934)
BHF-UCL PMID:20551380 PMID:22261194 PMID:25037231 PMID:27068509 PMID:27559042 More... NCBI chr 1:168,695,468...168,729,206
Ensembl chr 1:168,695,468...168,729,206
JBrowse link
G DSPP dentin sialophosphoprotein ISO RGD PMID:16776771 RGD:1599799 NCBI chr 4:87,608,529...87,616,873
Ensembl chr 4:87,608,529...87,616,873
JBrowse link
G ECM1 extracellular matrix protein 1 located_in
is_active_in
IDA
IBA
HDA
(PMID:20870722)
(PMID:25037231), (PMID:27068509)
UniProt
GO_Central
BHF-UCL
PMID:20870722 PMID:25037231 PMID:27068509 GO_REF:0000033 NCBI chr 1:150,508,109...150,513,789
Ensembl chr 1:150,508,062...150,513,789
JBrowse link
G EDIL3 EGF like repeats and discoidin domains 3 located_in HDA (PMID:23979707), (PMID:27068509), (PMID:28327460) BHF-UCL PMID:23979707 PMID:27068509 PMID:28327460 NCBI chr 5:83,940,554...84,384,880
Ensembl chr 5:83,940,554...84,384,880
JBrowse link
G EFEMP1 EGF containing fibulin extracellular matrix protein 1 located_in HDA (PMID:20551380), (PMID:25037231), (PMID:28675934) BHF-UCL PMID:20551380 PMID:25037231 PMID:28675934 NCBI chr 2:55,865,967...55,923,782
Ensembl chr 2:55,865,967...55,924,139
JBrowse link
G EFEMP2 EGF containing fibulin extracellular matrix protein 2 located_in HDA (PMID:28327460) BHF-UCL PMID:28327460 NCBI chr11:65,866,441...65,872,800
Ensembl chr11:65,866,441...65,873,592
JBrowse link
G EGFL7 EGF like domain multiple 7 located_in HDA (PMID:23658023), (PMID:25037231), (PMID:28675934) BHF-UCL PMID:23658023 PMID:25037231 PMID:28675934 NCBI chr 9:136,658,856...136,672,678
Ensembl chr 9:136,658,856...136,672,678
JBrowse link
G ELANE elastase, neutrophil expressed located_in HDA (PMID:25037231), (PMID:28344315) BHF-UCL PMID:25037231 PMID:28344315 NCBI chr19:852,303...856,243
Ensembl chr19:851,014...856,247
JBrowse link
G ELN elastin located_in HDA (PMID:25037231), (PMID:27559042), (PMID:28327460), (PMID:28675934) BHF-UCL PMID:25037231 PMID:27559042 PMID:28327460 PMID:28675934 NCBI chr 7:74,028,173...74,069,907
Ensembl chr 7:74,027,789...74,069,907
JBrowse link
G EMILIN1 elastin microfibril interfacer 1 located_in IMP
HDA
(PMID:26462740)
(PMID:20551380), (PMID:23658023), (PMID:23979707), (PMID:25037231), (PMID:27068509), (PMID:28327460), (PMID:28675934)
UniProt
BHF-UCL
PMID:20551380 PMID:23658023 PMID:23979707 PMID:25037231 PMID:26462740 More... NCBI chr 2:27,078,615...27,086,403
Ensembl chr 2:27,078,615...27,086,403
JBrowse link
G EMILIN2 elastin microfibril interfacer 2 located_in HDA (PMID:23658023), (PMID:25037231), (PMID:28327460), (PMID:28675934) UniProt PMID:23658023 PMID:25037231 PMID:28327460 PMID:28675934 NCBI chr18:2,846,232...2,916,003
Ensembl chr18:2,847,006...2,916,003
JBrowse link
G EMILIN3 elastin microfibril interfacer 3 located_in HDA
ISS
(PMID:25037231)
(PMID:22261194)
BHF-UCL PMID:22261194 PMID:25037231 NCBI chr20:41,359,962...41,366,818
Ensembl chr20:41,359,962...41,366,818
JBrowse link
G ESM1 endothelial cell specific molecule 1 is_active_in HDA (PMID:27068509) GO_Central PMID:27068509 NCBI chr 5:54,977,867...54,985,593
Ensembl chr 5:54,977,867...55,022,671
JBrowse link
G F12 coagulation factor XII located_in HDA (PMID:25037231) BHF-UCL PMID:25037231 NCBI chr 5:177,402,141...177,409,564
Ensembl chr 5:177,402,133...177,416,583
JBrowse link
G F13A1 coagulation factor XIII A chain located_in HDA (PMID:25037231), (PMID:28344315), (PMID:28675934) BHF-UCL PMID:25037231 PMID:28344315 PMID:28675934 NCBI chr 6:6,144,084...6,320,662
Ensembl chr 6:6,144,084...6,321,013
JBrowse link
G F2 coagulation factor II, thrombin is_active_in
located_in
ISO
IBA
HDA
(PMID:28327460) RGD
GO_Central
BHF-UCL
PMID:21191574 PMID:28327460 GO_REF:0000033 RGD:7387308 NCBI chr11:46,719,213...46,739,506
Ensembl chr11:46,719,196...46,739,506
JBrowse link
G F3 coagulation factor III, tissue factor located_in IDA (PMID:2704749) BHF-UCL PMID:2704749 NCBI chr 1:94,529,173...94,541,759
Ensembl chr 1:94,529,173...94,541,759
JBrowse link
G F7 coagulation factor VII located_in HDA (PMID:25037231) BHF-UCL PMID:25037231 NCBI chr13:113,105,788...113,120,685
Ensembl chr13:113,105,788...113,120,685
JBrowse link
G F9 coagulation factor IX located_in HDA (PMID:25037231) BHF-UCL PMID:25037231 NCBI chr  X:139,530,739...139,563,459
Ensembl chr  X:139,530,739...139,563,459
JBrowse link
G FBLN1 fibulin 1 located_in HDA (PMID:20551380), (PMID:25037231), (PMID:28327460), (PMID:28675934) BHF-UCL PMID:20551380 PMID:25037231 PMID:28327460 PMID:28675934 NCBI chr22:45,502,883...45,601,135
Ensembl chr22:45,502,238...45,601,135
JBrowse link
G FBLN2 fibulin 2 located_in HDA
ISS
(PMID:23658023), (PMID:25037231), (PMID:27559042), (PMID:28327460)
(PMID:22261194)
UniProt
BHF-UCL
PMID:22261194 PMID:23658023 PMID:25037231 PMID:27559042 PMID:28327460 NCBI chr 3:13,549,125...13,638,404
Ensembl chr 3:13,549,125...13,638,422
JBrowse link
G FBLN5 fibulin 5 located_in IDA
HDA
(PMID:17035250)
(PMID:20551380), (PMID:25037231), (PMID:28675934)
UniProt
BHF-UCL
PMID:17035250 PMID:20551380 PMID:25037231 PMID:28675934 NCBI chr14:91,869,411...91,947,694
Ensembl chr14:91,869,411...91,947,987
JBrowse link
G FBN1 fibrillin 1 located_in ISO
HDA
(PMID:20551380), (PMID:23658023), (PMID:23979707), (PMID:25037231), (PMID:27559042), (PMID:28327460), (PMID:28675934) RGD
BHF-UCL
PMID:15849235 PMID:20551380 PMID:23658023 PMID:23979707 PMID:25037231 More... RGD:1601147 NCBI chr15:48,408,313...48,645,709
Ensembl chr15:48,408,313...48,645,721
JBrowse link
G FBN2 fibrillin 2 located_in HDA (PMID:23658023), (PMID:28327460), (PMID:28675934) BHF-UCL PMID:23658023 PMID:28327460 PMID:28675934 NCBI chr 5:128,257,909...128,538,245
Ensembl chr 5:128,257,909...128,659,185
JBrowse link
G FCN1 ficolin 1 located_in
is_active_in
HDA
IBA
(PMID:28344315) BHF-UCL
GO_Central
PMID:28344315 GO_REF:0000033 NCBI chr 9:134,903,232...134,917,912
Ensembl chr 9:134,903,232...134,917,912
JBrowse link
G FCN2 ficolin 2 is_active_in IBA GO_Central GO_REF:0000033 NCBI chr 9:134,864,144...134,887,523
Ensembl chr 9:134,880,810...134,887,523
JBrowse link
G FCN3 ficolin 3 is_active_in IBA GO_Central GO_REF:0000033 NCBI chr 1:27,369,110...27,374,824
Ensembl chr 1:27,369,110...27,374,824
JBrowse link
G FDCSP follicular dendritic cell secreted protein is_active_in ISO (PMID:18806264) MGI PMID:18806264 NCBI chr 4:70,226,124...70,235,252
Ensembl chr 4:70,226,124...70,235,252
JBrowse link
G FGA fibrinogen alpha chain located_in HDA (PMID:25037231), (PMID:28344315), (PMID:28675934) BHF-UCL PMID:25037231 PMID:28344315 PMID:28675934 NCBI chr 4:154,583,126...154,590,742
Ensembl chr 4:154,583,126...154,590,742
JBrowse link
G FGB fibrinogen beta chain located_in
is_active_in
HDA
IBA
(PMID:25037231), (PMID:28327460), (PMID:28344315), (PMID:28675934) BHF-UCL
GO_Central
PMID:25037231 PMID:28327460 PMID:28344315 PMID:28675934 GO_REF:0000033 NCBI chr 4:154,562,980...154,572,807
Ensembl chr 4:154,563,011...154,572,807
JBrowse link
G FGF10 fibroblast growth factor 10 located_in IDA (PMID:17959718) UniProt PMID:17959718 NCBI chr 5:44,300,247...44,389,420
Ensembl chr 5:44,300,247...44,389,706
JBrowse link
G FGFBP3 fibroblast growth factor binding protein 3 located_in HDA (PMID:23658023) UniProt PMID:23658023 NCBI chr10:91,906,584...91,909,486
Ensembl chr10:91,906,584...91,909,486
JBrowse link
G FGFR2 fibroblast growth factor receptor 2 located_in IDA (PMID:17959718) UniProt PMID:17959718 NCBI chr10:121,478,330...121,598,458
Ensembl chr10:121,478,332...121,598,458
JBrowse link
G FGG fibrinogen gamma chain located_in
is_active_in
HDA
IBA
(PMID:25037231), (PMID:28327460), (PMID:28344315), (PMID:28675934) BHF-UCL
GO_Central
PMID:25037231 PMID:28327460 PMID:28344315 PMID:28675934 GO_REF:0000033 NCBI chr 4:154,604,136...154,612,656
Ensembl chr 4:154,604,134...154,612,967
JBrowse link
G FGL1 fibrinogen like 1 is_active_in IBA GO_Central GO_REF:0000033 NCBI chr 8:17,864,389...17,895,538
Ensembl chr 8:17,864,380...17,910,365
JBrowse link
G FGL2 fibrinogen like 2 located_in
is_active_in
HDA
IBA
(PMID:28327460) BHF-UCL
GO_Central
PMID:28327460 GO_REF:0000033 NCBI chr 7:77,193,369...77,199,819
Ensembl chr 7:77,193,369...77,199,848
JBrowse link
G FIBCD1 fibrinogen C domain containing 1 is_active_in IBA GO_Central GO_REF:0000033 NCBI chr 9:130,902,440...130,940,709
Ensembl chr 9:130,902,438...130,939,286
JBrowse link
G FLG filaggrin located_in HDA (PMID:28344315) BHF-UCL PMID:28344315 NCBI chr 1:152,302,165...152,325,239
Ensembl chr 1:152,302,165...152,325,239
JBrowse link
G FMOD fibromodulin located_in ISO
HDA
(PMID:20551380), (PMID:27559042) RGD
BHF-UCL
PMID:12941075 PMID:20551380 PMID:27559042 RGD:2315082 NCBI chr 1:203,340,628...203,351,122
Ensembl chr 1:203,340,628...203,351,758
JBrowse link
G FN1 fibronectin 1 located_in IDA
HDA
ISS
(PMID:16157329), (PMID:1632457)
(PMID:20551380), (PMID:23658023), (PMID:23979707), (PMID:25037231), (PMID:27559042), (PMID:28327460), (PMID:28344315), (PMID:28675934)
(PMID:22261194)
UniProt
BHF-UCL
PMID:1632457 PMID:16157329 PMID:20551380 PMID:22261194 PMID:23658023 More... NCBI chr 2:215,360,865...215,436,068
Ensembl chr 2:215,360,440...215,436,073
JBrowse link
G FRAS1 Fraser extracellular matrix complex subunit 1 is_active_in
located_in
IBA
ISS
GO_Central
ARUK-UCL
GO_REF:0000024 GO_REF:0000033 NCBI chr 4:78,057,323...78,544,269
Ensembl chr 4:78,057,323...78,544,269
JBrowse link
G FREM1 FRAS1 related extracellular matrix 1 is_active_in IBA GO_Central GO_REF:0000033 NCBI chr 9:14,737,152...14,910,995
Ensembl chr 9:14,737,152...14,910,995
JBrowse link
G FREM2 FRAS1 related extracellular matrix 2 is_active_in IBA GO_Central GO_REF:0000033 NCBI chr13:38,687,077...38,887,131
Ensembl chr13:38,687,077...38,887,131
JBrowse link
G FREM3 FRAS1 related extracellular matrix 3 located_in
is_active_in
TAS
IBA
(PMID:22261194) BHF-UCL
GO_Central
PMID:22261194 GO_REF:0000033 NCBI chr 4:143,577,302...143,700,675
Ensembl chr 4:143,577,302...143,700,675
JBrowse link
G GDF10 growth differentiation factor 10 located_in HDA (PMID:27068509) BHF-UCL PMID:27068509 NCBI chr10:47,300,197...47,313,577
Ensembl chr10:47,300,197...47,313,577
JBrowse link
G GDF15 growth differentiation factor 15 located_in HDA (PMID:28327460) BHF-UCL PMID:28327460 NCBI chr19:18,386,158...18,389,176
Ensembl chr19:18,374,731...18,389,176
JBrowse link
G GH1 growth hormone 1 located_in ISO
HDA
(PMID:28327460) RGD
BHF-UCL
PMID:9255605 PMID:28327460 RGD:12904880 NCBI chr17:63,917,203...63,918,839
Ensembl chr17:63,917,200...63,918,839
JBrowse link
G GPC1 glypican 1 located_in HDA (PMID:27559042) BHF-UCL PMID:27559042 NCBI chr 2:240,435,663...240,468,076
Ensembl chr 2:240,435,663...240,468,076
JBrowse link
G GREM1 gremlin 1, DAN family BMP antagonist located_in HDA (PMID:25037231), (PMID:28327460) BHF-UCL PMID:25037231 PMID:28327460 NCBI chr15:32,718,004...32,745,106
Ensembl chr15:32,718,004...32,745,106
JBrowse link
G HAPLN1 hyaluronan and proteoglycan link protein 1 located_in HDA (PMID:20551380), (PMID:23979707), (PMID:27068509), (PMID:28327460) BHF-UCL PMID:20551380 PMID:23979707 PMID:27068509 PMID:28327460 NCBI chr 5:83,637,805...83,720,855
Ensembl chr 5:83,637,805...83,720,855
JBrowse link
G HDGF heparin binding growth factor located_in HDA (PMID:27559042) BHF-UCL PMID:27559042 NCBI chr 1:156,742,107...156,767,366
Ensembl chr 1:156,742,109...156,766,925
JBrowse link
G HMCN1 hemicentin 1 located_in
is_active_in
HDA
IBA
TAS
(PMID:28344315)
(PMID:22261194)
BHF-UCL
GO_Central
PMID:22261194 PMID:28344315 GO_REF:0000033 NCBI chr 1:185,734,391...186,190,949
Ensembl chr 1:185,734,391...186,190,949
JBrowse link
G HMCN2 hemicentin 2 located_in HDA (PMID:27068509) BHF-UCL PMID:27068509 NCBI chr 9:130,265,760...130,434,123
Ensembl chr 9:130,265,760...130,434,123
JBrowse link
G HNRNPM heterogeneous nuclear ribonucleoprotein M located_in HDA (PMID:23658023) UniProt PMID:23658023 NCBI chr19:8,444,975...8,489,114
Ensembl chr19:8,444,767...8,489,114
JBrowse link
G HPX hemopexin located_in HDA (PMID:28675934) BHF-UCL PMID:28675934 NCBI chr11:6,431,049...6,440,987
Ensembl chr11:6,431,049...6,442,617
JBrowse link
G HRG histidine rich glycoprotein located_in HDA (PMID:25037231), (PMID:28344315), (PMID:28675934) BHF-UCL PMID:25037231 PMID:28344315 PMID:28675934 NCBI chr 3:186,666,014...186,678,234
Ensembl chr 3:186,660,216...186,678,234
JBrowse link
G HRNR hornerin located_in HDA (PMID:28344315) BHF-UCL PMID:28344315 NCBI chr 1:152,212,076...152,224,193
Ensembl chr 1:152,212,076...152,224,193
JBrowse link
G HSP90AA1 heat shock protein 90 alpha family class A member 1 ISO RGD PMID:15497505 RGD:2316936 NCBI chr14:102,080,742...102,139,749
Ensembl chr14:102,080,742...102,139,699
JBrowse link
G HSP90B1 heat shock protein 90 beta family member 1 located_in HDA (PMID:23658023) UniProt PMID:23658023 NCBI chr12:103,930,410...103,947,926
Ensembl chr12:103,930,107...103,953,931
JBrowse link
G HSPG2 heparan sulfate proteoglycan 2 located_in ISO
ISS
HDA
(PMID:20551380), (PMID:23658023), (PMID:23979707), (PMID:25037231), (PMID:27559042), (PMID:28327460), (PMID:28675934) RGD
BHF-UCL
PMID:15928048 PMID:20551380 PMID:23658023 PMID:23979707 PMID:25037231 More... GO_REF:0000024 RGD:1624263 NCBI chr 1:21,822,244...21,937,310
Ensembl chr 1:21,822,244...21,937,310
JBrowse link
G HTRA1 HtrA serine peptidase 1 is_active_in
located_in
ISO
IBA
HDA
dentin matrix
(PMID:20551380), (PMID:23979707), (PMID:27068509), (PMID:28327460)
RGD
GO_Central
BHF-UCL
PMID:20551380 PMID:22595117 PMID:23979707 PMID:27068509 PMID:28327460 GO_REF:0000033 RGD:7394756 NCBI chr10:122,461,553...122,514,907
Ensembl chr10:122,458,551...122,514,907
JBrowse link
G ICAM1 intercellular adhesion molecule 1 located_in HDA (PMID:27559042) BHF-UCL PMID:27559042 NCBI chr19:10,271,120...10,286,615
Ensembl chr19:10,271,093...10,286,615
JBrowse link
G IFNA2 interferon alpha 2 located_in HDA (PMID:28327460), (PMID:28675934) BHF-UCL PMID:28327460 PMID:28675934 NCBI chr 9:21,384,255...21,385,398
Ensembl chr 9:21,384,255...21,385,398
JBrowse link
G IGFBP7 insulin like growth factor binding protein 7 located_in
is_active_in
HDA
IBA
(PMID:20551380), (PMID:25037231), (PMID:27559042) BHF-UCL
GO_Central
PMID:20551380 PMID:25037231 PMID:27559042 GO_REF:0000033 NCBI chr 4:57,030,773...57,110,385
Ensembl chr 4:57,030,773...57,110,385
JBrowse link
G IGFBPL1 insulin like growth factor binding protein like 1 is_active_in IBA GO_Central GO_REF:0000033 NCBI chr 9:38,406,528...38,424,454
Ensembl chr 9:38,406,528...38,424,454
JBrowse link
G IL7 interleukin 7 located_in HDA (PMID:28675934) BHF-UCL PMID:28675934 NCBI chr 8:78,675,044...78,805,463
Ensembl chr 8:78,675,743...78,805,523
JBrowse link
G INHBE inhibin subunit beta E located_in HDA (PMID:25037231) BHF-UCL PMID:25037231 NCBI chr12:57,455,307...57,458,025
Ensembl chr12:57,452,323...57,459,280
JBrowse link
G ITIH1 inter-alpha-trypsin inhibitor heavy chain 1 located_in HDA (PMID:25037231), (PMID:28675934) BHF-UCL PMID:25037231 PMID:28675934 NCBI chr 3:52,777,599...52,792,068
Ensembl chr 3:52,777,595...52,792,068
JBrowse link
G ITIH2 inter-alpha-trypsin inhibitor heavy chain 2 located_in HDA (PMID:25037231), (PMID:28327460), (PMID:28675934) BHF-UCL PMID:25037231 PMID:28327460 PMID:28675934 NCBI chr10:7,703,316...7,749,520
Ensembl chr10:7,703,316...7,749,520
JBrowse link
G ITIH4 inter-alpha-trypsin inhibitor heavy chain 4 located_in HDA (PMID:25037231), (PMID:28675934) BHF-UCL PMID:25037231 PMID:28675934 NCBI chr 3:52,812,962...52,830,672
Ensembl chr 3:52,812,962...52,830,688
JBrowse link
G ITIH5 inter-alpha-trypsin inhibitor heavy chain 5 located_in HDA (PMID:25037231), (PMID:28675934) BHF-UCL PMID:25037231 PMID:28675934 NCBI chr10:7,559,270...7,666,966
Ensembl chr10:7,559,270...7,666,998
JBrowse link
G KNG1 kininogen 1 located_in HDA (PMID:25037231), (PMID:27559042), (PMID:28675934) BHF-UCL PMID:25037231 PMID:27559042 PMID:28675934 NCBI chr 3:186,717,359...186,744,410
Ensembl chr 3:186,717,348...186,744,410
JBrowse link
G KRT1 keratin 1 located_in HDA (PMID:23658023) UniProt PMID:23658023 NCBI chr12:52,674,736...52,680,407
Ensembl chr12:52,674,736...52,680,407
JBrowse link
G L1CAM L1 cell adhesion molecule located_in HDA (PMID:27559042) BHF-UCL PMID:27559042 NCBI chr  X:153,861,514...153,886,173
Ensembl chr  X:153,861,514...153,886,173
JBrowse link
G LAMA1 laminin subunit alpha 1 located_in HDA
TAS
(PMID:23658023)
(PMID:22261194)
UniProt
BHF-UCL
PMID:22261194 PMID:23658023 NCBI chr18:6,941,742...7,117,797
Ensembl chr18:6,941,742...7,117,797
JBrowse link
G LAMA2 laminin subunit alpha 2 located_in HDA (PMID:25037231), (PMID:27068509), (PMID:27559042), (PMID:28675934) BHF-UCL PMID:25037231 PMID:27068509 PMID:27559042 PMID:28675934 NCBI chr 6:128,883,138...129,516,566
Ensembl chr 6:128,883,138...129,516,566
JBrowse link
G LAMA3 laminin subunit alpha 3 located_in HDA (PMID:27068509) BHF-UCL PMID:27068509 NCBI chr18:23,689,453...23,955,066
Ensembl chr18:23,689,453...23,956,222
JBrowse link
G LAMA4 laminin subunit alpha 4 located_in HDA
ISS
(PMID:25037231), (PMID:27068509), (PMID:27559042), (PMID:28675934)
(PMID:22261194)
BHF-UCL PMID:22261194 PMID:25037231 PMID:27068509 PMID:27559042 PMID:28675934 NCBI chr 6:112,107,931...112,254,985
Ensembl chr 6:112,107,931...112,254,939
JBrowse link
G LAMA5 laminin subunit alpha 5 located_in HDA (PMID:20551380), (PMID:23658023), (PMID:25037231), (PMID:27068509), (PMID:27559042), (PMID:28675934) BHF-UCL PMID:20551380 PMID:23658023 PMID:25037231 PMID:27068509 PMID:27559042 More... NCBI chr20:62,309,065...62,367,312
Ensembl chr20:62,307,955...62,367,312
JBrowse link
G LAMB1 laminin subunit beta 1 located_in ISO
ISS
HDA
(PMID:22261194)
(PMID:23658023), (PMID:25037231), (PMID:27068509), (PMID:27559042), (PMID:28675934)
RGD
BHF-UCL
PMID:15928048 PMID:22261194 PMID:23658023 PMID:25037231 PMID:27068509 More... RGD:1624263 NCBI chr 7:107,923,799...108,003,161
Ensembl chr 7:107,923,799...108,003,213
JBrowse link
G LAMB2 laminin subunit beta 2 located_in HDA
ISS
(PMID:20551380), (PMID:25037231), (PMID:27068509), (PMID:27559042), (PMID:28675934)
(PMID:22261194)
BHF-UCL PMID:20551380 PMID:22261194 PMID:25037231 PMID:27068509 PMID:27559042 More... NCBI chr 3:49,121,114...49,133,050
Ensembl chr 3:49,121,114...49,133,118
JBrowse link
G LAMB3 laminin subunit beta 3 located_in HDA (PMID:25037231) BHF-UCL PMID:25037231 NCBI chr 1:209,614,870...209,652,425
Ensembl chr 1:209,614,870...209,652,425
JBrowse link
G LAMC1 laminin subunit gamma 1 located_in ISO
HDA
ISS
(PMID:20551380), (PMID:23658023), (PMID:25037231), (PMID:27068509), (PMID:27559042), (PMID:28675934)
(PMID:22261194)
RGD
BHF-UCL
PMID:15928048 PMID:20551380 PMID:22261194 PMID:23658023 PMID:25037231 More... RGD:1624263 NCBI chr 1:183,023,420...183,145,592
Ensembl chr 1:183,023,420...183,145,592
JBrowse link
G LAMC2 laminin subunit gamma 2 located_in HDA (PMID:25037231), (PMID:28675934) BHF-UCL PMID:25037231 PMID:28675934 NCBI chr 1:183,186,264...183,258,968
Ensembl chr 1:183,186,238...183,245,127
JBrowse link
G LEFTY2 left-right determination factor 2 located_in HDA (PMID:23658023) UniProt PMID:23658023 NCBI chr 1:225,936,603...225,941,220
Ensembl chr 1:225,936,598...225,941,383
JBrowse link
G LGALS1 galectin 1 located_in HDA
ISS
(PMID:20551380), (PMID:23979707), (PMID:25037231), (PMID:27559042), (PMID:28327460), (PMID:28675934)
(PMID:22261194)
BHF-UCL PMID:20551380 PMID:22261194 PMID:23979707 PMID:25037231 PMID:27559042 More... NCBI chr22:37,675,636...37,679,802
Ensembl chr22:37,675,636...37,679,802
JBrowse link
G LGALS3 galectin 3 located_in HDA (PMID:20551380), (PMID:25037231), (PMID:27559042), (PMID:28327460), (PMID:28675934) BHF-UCL PMID:20551380 PMID:25037231 PMID:27559042 PMID:28327460 PMID:28675934 NCBI chr14:55,129,252...55,145,430
Ensembl chr14:55,124,110...55,145,423
JBrowse link
G LGALS3BP galectin 3 binding protein located_in HDA (PMID:20551380), (PMID:27559042) BHF-UCL PMID:20551380 PMID:27559042 NCBI chr17:78,971,255...78,979,923
Ensembl chr17:78,971,238...78,979,947
JBrowse link
G LGALS4 galectin 4 located_in HDA (PMID:25037231) BHF-UCL PMID:25037231 NCBI chr19:38,801,674...38,812,945
Ensembl chr19:38,801,671...38,812,945
JBrowse link
G LGALS9 galectin 9 located_in HDA (PMID:25037231) BHF-UCL PMID:25037231 NCBI chr17:27,631,188...27,649,560
Ensembl chr17:27,629,798...27,649,560
JBrowse link
G LMAN1 lectin, mannose binding 1 located_in HDA (PMID:25037231), (PMID:28675934) BHF-UCL PMID:25037231 PMID:28675934 NCBI chr18:59,327,823...59,359,265
Ensembl chr18:59,327,823...59,359,265
JBrowse link
G LMAN1L lectin, mannose binding 1 like located_in HDA (PMID:28675934) BHF-UCL PMID:28675934 NCBI chr15:74,812,835...74,825,754
Ensembl chr15:74,812,716...74,825,757
JBrowse link
G LOX lysyl oxidase is_active_in IBA GO_Central GO_REF:0000033 NCBI chr 5:122,063,195...122,078,259
Ensembl chr 5:122,063,195...122,078,413
JBrowse link
G LOXL1 lysyl oxidase like 1 located_in
is_active_in
HDA
IBA
(PMID:20551380), (PMID:27068509), (PMID:28327460), (PMID:28675934) BHF-UCL
GO_Central
PMID:20551380 PMID:27068509 PMID:28327460 PMID:28675934 GO_REF:0000033 NCBI chr15:73,926,462...73,952,136
Ensembl chr15:73,925,989...73,952,137
JBrowse link
G LOXL2 lysyl oxidase like 2 located_in
is_active_in
HDA
IBA
(PMID:23979707), (PMID:28327460) BHF-UCL
GO_Central
PMID:23979707 PMID:28327460 GO_REF:0000033 NCBI chr 8:23,296,897...23,404,120
Ensembl chr 8:23,296,897...23,425,328
JBrowse link
G LOXL3 lysyl oxidase like 3 is_active_in IBA GO_Central GO_REF:0000033 NCBI chr 2:74,532,258...74,555,702
Ensembl chr 2:74,532,258...74,555,690
JBrowse link
G LOXL4 lysyl oxidase like 4 is_active_in IBA GO_Central GO_REF:0000033 NCBI chr10:98,247,690...98,268,194
Ensembl chr10:98,247,690...98,268,194
JBrowse link
G LRRC15 leucine rich repeat containing 15 located_in IDA (PMID:16098915) UniProt PMID:16098915 NCBI chr 3:194,355,249...194,369,743
Ensembl chr 3:194,355,249...194,369,743
JBrowse link
G LTBP1 latent transforming growth factor beta binding protein 1 located_in ISO
HDA
IDA
(PMID:20551380), (PMID:23979707), (PMID:25037231), (PMID:28327460), (PMID:28675934)
(PMID:16157329)
RGD
BHF-UCL
UniProt
PMID:9766531 PMID:16157329 PMID:20551380 PMID:23979707 PMID:25037231 More... RGD:10412061 NCBI chr 2:32,946,953...33,399,509
Ensembl chr 2:32,946,953...33,399,509
JBrowse link
G LTBP2 latent transforming growth factor beta binding protein 2 located_in HDA (PMID:20551380), (PMID:27559042), (PMID:28327460) BHF-UCL PMID:20551380 PMID:27559042 PMID:28327460 NCBI chr14:74,498,183...74,612,237
Ensembl chr14:74,498,183...74,612,378
JBrowse link
G LTBP3 latent transforming growth factor beta binding protein 3 located_in IDA (PMID:16157329) UniProt PMID:16157329 NCBI chr11:65,538,559...65,558,359
Ensembl chr11:65,538,559...65,558,930
JBrowse link
G LTBP4 latent transforming growth factor beta binding protein 4 located_in IDA
HDA
(PMID:16157329)
(PMID:20551380), (PMID:25037231), (PMID:27559042), (PMID:28675934)
UniProt
BHF-UCL
PMID:16157329 PMID:20551380 PMID:25037231 PMID:27559042 PMID:28675934 NCBI chr19:40,593,166...40,629,820
Ensembl chr19:40,592,883...40,629,818
JBrowse link
G LUM lumican located_in HDA
ISS
(PMID:20551380), (PMID:25037231), (PMID:27559042), (PMID:28675934)
(PMID:22261194)
BHF-UCL PMID:20551380 PMID:22261194 PMID:25037231 PMID:27559042 PMID:28675934 NCBI chr12:91,102,629...91,111,494
Ensembl chr12:91,102,629...91,111,494
JBrowse link
G MARCO macrophage receptor with collagenous structure is_active_in IBA GO_Central GO_REF:0000033 NCBI chr 2:118,942,194...118,994,660
Ensembl chr 2:118,942,194...118,994,660
JBrowse link
G MATN1 matrilin 1 is_active_in IBA GO_Central GO_REF:0000033 NCBI chr 1:30,711,277...30,723,585
Ensembl chr 1:30,711,277...30,723,585
JBrowse link
G MATN2 matrilin 2 located_in
is_active_in
ISS
IBA
HDA
(PMID:22261194)
(PMID:20551380), (PMID:23979707), (PMID:25037231), (PMID:27068509), (PMID:28675934)
BHF-UCL
GO_Central
PMID:20551380 PMID:22261194 PMID:23979707 PMID:25037231 PMID:27068509 More... GO_REF:0000033 NCBI chr 8:97,869,064...98,036,724
Ensembl chr 8:97,868,840...98,036,724
JBrowse link
G MATN3 matrilin 3 is_active_in
located_in
IBA
ISO
(PMID:10660556) GO_Central
ComplexPortal
PMID:10660556 GO_REF:0000033 NCBI chr 2:19,992,052...20,012,668
Ensembl chr 2:19,992,052...20,012,668
JBrowse link
G MATN4 matrilin 4 is_active_in
located_in
IBA
ISO
(PMID:11279097) GO_Central
ComplexPortal
PMID:11279097 GO_REF:0000033 NCBI chr20:45,293,450...45,308,684
Ensembl chr20:45,293,445...45,308,529
JBrowse link
G MDK midkine located_in HDA (PMID:28327460) BHF-UCL PMID:28327460 NCBI chr11:46,380,784...46,383,837
Ensembl chr11:46,380,756...46,383,837
JBrowse link
G MFAP2 microfibril associated protein 2 located_in HDA (PMID:25037231), (PMID:28327460), (PMID:28675934) BHF-UCL PMID:25037231 PMID:28327460 PMID:28675934 NCBI chr 1:16,974,502...16,981,583
Ensembl chr 1:16,974,502...16,980,632
JBrowse link
G MFAP4 microfibril associated protein 4 located_in
is_active_in
IDA
IBA
HDA
(PMID:26601954)
(PMID:20551380), (PMID:25037231), (PMID:28675934)
UniProt
GO_Central
BHF-UCL
PMID:20551380 PMID:25037231 PMID:26601954 PMID:28675934 GO_REF:0000033 NCBI chr17:19,383,445...19,387,190
Ensembl chr17:19,383,442...19,387,190
JBrowse link
G MFAP5 microfibril associated protein 5 located_in HDA (PMID:25037231), (PMID:27068509), (PMID:28327460), (PMID:28675934) BHF-UCL PMID:25037231 PMID:27068509 PMID:28327460 PMID:28675934 NCBI chr12:8,645,943...8,662,826
Ensembl chr12:8,637,346...8,662,888
JBrowse link
G MFGE8 milk fat globule EGF and factor V/VIII domain containing located_in HDA (PMID:20551380), (PMID:27068509), (PMID:27559042), (PMID:28327460) BHF-UCL PMID:20551380 PMID:27068509 PMID:27559042 PMID:28327460 NCBI chr15:88,898,683...88,913,379
Ensembl chr15:88,898,683...88,913,468
JBrowse link
G MGP matrix Gla protein located_in ISO
HDA
(PMID:20551380), (PMID:23979707), (PMID:27068509), (PMID:27559042) RGD
BHF-UCL
PMID:11716499 PMID:20551380 PMID:23979707 PMID:27068509 PMID:27559042 RGD:2293597 NCBI chr12:14,880,864...14,885,854
Ensembl chr12:14,880,864...14,885,857
JBrowse link
G MMP2 matrix metallopeptidase 2 located_in HDA (PMID:23979707), (PMID:28327460) BHF-UCL PMID:23979707 PMID:28327460 NCBI chr16:55,478,830...55,506,691
Ensembl chr16:55,389,700...55,506,691
JBrowse link
G MMP23B matrix metallopeptidase 23B located_in HDA (PMID:28344315) BHF-UCL PMID:28344315 NCBI chr 1:1,632,173...1,634,654
Ensembl chr 1:1,632,163...1,635,263
JBrowse link
G MMP28 matrix metallopeptidase 28 located_in HDA (PMID:27068509) BHF-UCL PMID:27068509 NCBI chr17:35,756,249...35,795,641
Ensembl chr17:35,756,249...35,795,707
JBrowse link
G MMP8 matrix metallopeptidase 8 located_in HDA (PMID:28344315) BHF-UCL PMID:28344315 NCBI chr11:102,711,796...102,724,954
Ensembl chr11:102,711,796...102,727,050
JBrowse link
G MMP9 matrix metallopeptidase 9 located_in HDA (PMID:28344315) BHF-UCL PMID:28344315 NCBI chr20:46,008,908...46,016,561
Ensembl chr20:46,008,908...46,016,561
JBrowse link
G MMRN2 multimerin 2 located_in HDA (PMID:23979707), (PMID:28675934) BHF-UCL PMID:23979707 PMID:28675934 NCBI chr10:86,935,540...86,957,615
Ensembl chr10:86,935,540...86,969,481
JBrowse link
G MST1 macrophage stimulating 1 located_in HDA (PMID:25037231) BHF-UCL PMID:25037231 NCBI chr 3:49,683,947...49,689,474
Ensembl chr 3:49,683,947...49,689,501
JBrowse link
G MUC17 mucin 17, cell surface associated located_in HDA (PMID:28344315) BHF-UCL PMID:28344315 NCBI chr 7:101,020,081...101,058,859
Ensembl chr 7:101,020,072...101,058,859
JBrowse link
G MUC2 mucin 2, oligomeric mucus/gel-forming located_in HDA (PMID:25037231) BHF-UCL PMID:25037231 NCBI chr11:1,074,874...1,110,508
Ensembl chr11:1,074,875...1,110,511
JBrowse link
G MXRA5 matrix remodeling associated 5 located_in HDA (PMID:28327460), (PMID:28344315) BHF-UCL PMID:28327460 PMID:28344315 NCBI chr  X:3,308,565...3,346,652
Ensembl chr  X:3,308,565...3,346,652
JBrowse link
G MXRA7 matrix remodeling associated 7 located_in HDA (PMID:27559042) BHF-UCL PMID:27559042 NCBI chr17:76,672,551...76,710,965
Ensembl chr17:76,672,551...76,711,004
JBrowse link
G MYOC myocilin located_in IDA (PMID:11773026) UniProt PMID:11773026 NCBI chr 1:171,635,417...171,652,688
Ensembl chr 1:171,635,417...171,652,688
JBrowse link
G NCAM1 neural cell adhesion molecule 1 located_in HDA (PMID:27559042) BHF-UCL PMID:27559042 NCBI chr11:112,961,420...113,278,436
Ensembl chr11:112,961,275...113,278,436
JBrowse link
G NDP norrin cystine knot growth factor NDP located_in
is_active_in
IDA
IBA
(PMID:15035989) BHF-UCL
GO_Central
PMID:15035989 GO_REF:0000033 NCBI chr  X:43,948,776...43,973,390
Ensembl chr  X:43,948,776...43,973,395
JBrowse link
G NID1 nidogen 1 located_in ISS
HDA
(PMID:22261194)
(PMID:20551380), (PMID:23658023), (PMID:25037231), (PMID:27068509), (PMID:27559042), (PMID:28675934)
BHF-UCL PMID:20551380 PMID:22261194 PMID:23658023 PMID:25037231 PMID:27068509 More... NCBI chr 1:235,975,830...236,065,090
Ensembl chr 1:235,975,830...236,065,109
JBrowse link
G NID2 nidogen 2 located_in HDA (PMID:20551380), (PMID:23658023), (PMID:27068509), (PMID:27559042), (PMID:28327460), (PMID:28675934) BHF-UCL PMID:20551380 PMID:23658023 PMID:27068509 PMID:27559042 PMID:28327460 More... NCBI chr14:52,004,809...52,069,059
Ensembl chr14:52,004,809...52,069,059
JBrowse link
G NPNT nephronectin located_in ISS
HDA
(PMID:25037231), (PMID:28675934) BHF-UCL PMID:25037231 PMID:28675934 GO_REF:0000024 NCBI chr 4:105,895,471...105,971,671
Ensembl chr 4:105,894,775...106,004,027
JBrowse link
G NPPA natriuretic peptide A located_in HDA (PMID:27559042) BHF-UCL PMID:27559042 NCBI chr 1:11,845,709...11,847,783
Ensembl chr 1:11,845,709...11,848,345
JBrowse link
G OGN osteoglycin located_in HDA (PMID:20551380), (PMID:25037231), (PMID:27559042), (PMID:28675934) BHF-UCL PMID:20551380 PMID:25037231 PMID:27559042 PMID:28675934 NCBI chr 9:92,383,268...92,404,699
Ensembl chr 9:92,383,268...92,404,696
JBrowse link
G ORM1 orosomucoid 1 located_in HDA (PMID:27559042) BHF-UCL PMID:27559042 NCBI chr 9:114,323,098...114,326,479
Ensembl chr 9:114,323,098...114,326,479
JBrowse link
G ORM2 orosomucoid 2 located_in HDA (PMID:27559042) BHF-UCL PMID:27559042 NCBI chr 9:114,329,869...114,333,251
Ensembl chr 9:114,329,869...114,333,251
JBrowse link
G OTOL1 otolin 1 is_active_in IBA GO_Central GO_REF:0000033 NCBI chr 3:161,496,808...161,503,942
Ensembl chr 3:161,496,808...161,503,942
JBrowse link
G P3H1 prolyl 3-hydroxylase 1 located_in HDA (PMID:28327460) BHF-UCL PMID:28327460 NCBI chr 1:42,746,374...42,767,028
Ensembl chr 1:42,746,335...42,767,084
JBrowse link
G PCOLCE procollagen C-endopeptidase enhancer located_in HDA (PMID:20551380) BHF-UCL PMID:20551380 NCBI chr 7:100,602,363...100,608,175
Ensembl chr 7:100,602,363...100,608,175
JBrowse link
G PCSK6 proprotein convertase subtilisin/kexin type 6 located_in
is_active_in
IDA
IBA
(PMID:12535616) BHF-UCL
GO_Central
PMID:12535616 GO_REF:0000033 NCBI chr15:101,303,933...101,489,707
Ensembl chr15:101,289,784...101,525,202
JBrowse link
G PDGFB platelet derived growth factor subunit B located_in HDA (PMID:23979707) BHF-UCL PMID:23979707 NCBI chr22:39,223,359...39,244,982
Ensembl chr22:39,223,359...39,244,982
JBrowse link
G PF4 platelet factor 4 located_in HDA (PMID:28344315) BHF-UCL PMID:28344315 NCBI chr 4:73,980,811...73,982,124
Ensembl chr 4:73,980,811...73,982,027
JBrowse link
G PKM pyruvate kinase M1/2 located_in HDA (PMID:23658023) UniProt PMID:23658023 NCBI chr15:72,199,029...72,231,591
Ensembl chr15:72,199,029...72,231,819
JBrowse link
G PLAT plasminogen activator, tissue type NOT|located_in IDA (PMID:1632457) BHF-UCL PMID:1632457 NCBI chr 8:42,174,718...42,207,565
Ensembl chr 8:42,174,718...42,207,709
JBrowse link
G PLG plasminogen located_in HDA (PMID:25037231), (PMID:28675934) BHF-UCL PMID:25037231 PMID:28675934 NCBI chr 6:160,702,193...160,754,097
Ensembl chr 6:160,702,194...160,754,097
JBrowse link
G PLOD1 procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 is_active_in IBA GO_Central GO_REF:0000033 NCBI chr 1:11,934,717...11,975,537
Ensembl chr 1:11,934,205...11,975,538
JBrowse link
G PLOD2 procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 is_active_in IBA GO_Central GO_REF:0000033 NCBI chr 3:146,069,440...146,161,184
Ensembl chr 3:146,035,139...146,163,725
JBrowse link
G PLOD3 procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 is_active_in
located_in
IBA
ISO
(PMID:27435297) GO_Central
MGI
PMID:27435297 GO_REF:0000033 NCBI chr 7:101,205,984...101,217,581
Ensembl chr 7:101,205,977...101,218,420
JBrowse link
G PLSCR1 phospholipid scramblase 1 located_in IDA (PMID:20870722) UniProt PMID:20870722 NCBI chr 3:146,515,180...146,544,607
Ensembl chr 3:146,515,180...146,544,856
JBrowse link
G PODN podocan located_in HDA (PMID:27068509) BHF-UCL PMID:27068509 NCBI chr 1:53,062,213...53,085,494
Ensembl chr 1:53,062,052...53,085,501
JBrowse link
G PODNL1 podocan like 1 is_active_in
located_in
HDA
ISO
(PMID:26998606), (PMID:27068509)
(PMID:21672516)
GO_Central
UniProt
PMID:21672516 PMID:26998606 PMID:27068509 NCBI chr19:13,931,187...13,953,383
Ensembl chr19:13,931,187...13,953,392
JBrowse link
G POSTN periostin located_in IDA
HDA
(PMID:18450759)
(PMID:20551380), (PMID:25037231), (PMID:27068509), (PMID:27559042), (PMID:28327460), (PMID:28675934)
UniProt
BHF-UCL
PMID:18450759 PMID:20551380 PMID:25037231 PMID:27068509 PMID:27559042 More... NCBI chr13:37,562,585...37,598,768
Ensembl chr13:37,562,583...37,598,844
JBrowse link
G PRELP proline and arginine rich end leucine rich repeat protein located_in HDA
ISS
(PMID:20551380), (PMID:25037231), (PMID:27559042), (PMID:28675934)
(PMID:22261194)
BHF-UCL PMID:20551380 PMID:22261194 PMID:25037231 PMID:27559042 PMID:28675934 NCBI chr 1:203,475,806...203,491,352
Ensembl chr 1:203,475,806...203,491,352
JBrowse link
G PRG2 proteoglycan 2, pro eosinophil major basic protein located_in HDA (PMID:25037231), (PMID:28344315) BHF-UCL PMID:25037231 PMID:28344315 NCBI chr11:57,386,780...57,390,650
Ensembl chr11:57,386,780...57,390,650
JBrowse link
G PRG3 proteoglycan 3, pro eosinophil major basic protein 2 located_in HDA (PMID:25037231), (PMID:28344315) BHF-UCL PMID:25037231 PMID:28344315 NCBI chr11:57,376,769...57,381,150
Ensembl chr11:57,376,769...57,381,150
JBrowse link
G PRG4 proteoglycan 4 located_in
is_active_in
HDA
IBA
(PMID:25037231), (PMID:27559042) BHF-UCL
GO_Central
PMID:25037231 PMID:27559042 GO_REF:0000033 NCBI chr 1:186,296,273...186,314,567
Ensembl chr 1:186,296,279...186,314,567
JBrowse link
G PRSS1 serine protease 1 located_in HDA (PMID:28675934) BHF-UCL PMID:28675934 NCBI chr 7:142,749,472...142,753,072
Ensembl chr 7:142,749,468...142,753,072
JBrowse link
G PRTN3 proteinase 3 located_in HDA (PMID:20551380) BHF-UCL PMID:20551380 NCBI chr19:840,999...848,175
Ensembl chr19:840,999...848,175
JBrowse link
G PSAP prosaposin located_in HDA (PMID:27559042) BHF-UCL PMID:27559042 NCBI chr10:71,816,298...71,851,251
Ensembl chr10:71,816,298...71,851,251
JBrowse link
G PXDN peroxidasin located_in IDA
HDA
(PMID:19590037)
(PMID:23979707), (PMID:28327460)
UniProt
BHF-UCL
PMID:19590037 PMID:23979707 PMID:28327460 NCBI chr 2:1,631,887...1,744,901
Ensembl chr 2:1,631,887...1,744,852
JBrowse link
G PZP PZP alpha-2-macroglobulin like located_in HDA (PMID:28327460) BHF-UCL PMID:28327460 NCBI chr12:9,136,472...9,208,395
Ensembl chr12:9,148,840...9,208,395
JBrowse link
G RARRES2 retinoic acid receptor responder 2 located_in IDA (PMID:19443732) GO_Central PMID:19443732 NCBI chr 7:150,338,329...150,341,629
Ensembl chr 7:150,338,317...150,341,662
JBrowse link
G RPSA ribosomal protein SA ISO RGD PMID:11553521 RGD:2299067 NCBI chr 3:39,406,720...39,412,542
Ensembl chr 3:39,406,716...39,426,255
JBrowse link
G S100A10 S100 calcium binding protein A10 located_in HDA (PMID:28675934) BHF-UCL PMID:28675934 NCBI chr 1:151,982,915...151,993,859
Ensembl chr 1:151,982,915...151,993,859
JBrowse link
G S100A4 S100 calcium binding protein A4 located_in HDA (PMID:25037231) BHF-UCL PMID:25037231 NCBI chr 1:153,543,621...153,545,806
Ensembl chr 1:153,543,613...153,550,136
JBrowse link
G S100A6 S100 calcium binding protein A6 located_in HDA (PMID:25037231), (PMID:28675934) BHF-UCL PMID:25037231 PMID:28675934 NCBI chr 1:153,534,599...153,535,991
Ensembl chr 1:153,534,599...153,536,244
JBrowse link
G S100A7 S100 calcium binding protein A7 located_in HDA (PMID:27068509) BHF-UCL PMID:27068509 NCBI chr 1:153,457,744...153,460,651
Ensembl chr 1:153,457,744...153,460,651
JBrowse link
G S100A8 S100 calcium binding protein A8 located_in HDA (PMID:25037231), (PMID:28344315), (PMID:28675934) BHF-UCL PMID:25037231 PMID:28344315 PMID:28675934 NCBI chr 1:153,390,032...153,422,583
Ensembl chr 1:153,390,032...153,391,073
JBrowse link
G S100A9 S100 calcium binding protein A9 located_in HDA (PMID:23979707), (PMID:25037231), (PMID:28344315), (PMID:28675934) BHF-UCL PMID:23979707 PMID:25037231 PMID:28344315 PMID:28675934 NCBI chr 1:153,357,854...153,361,023
Ensembl chr 1:153,357,854...153,361,023
JBrowse link
G SBSPON somatomedin B and thrombospondin type 1 domain containing located_in HDA (PMID:20551380), (PMID:25037231), (PMID:27068509), (PMID:27559042) BHF-UCL PMID:20551380 PMID:25037231 PMID:27068509 PMID:27559042 NCBI chr 8:73,064,543...73,093,172
Ensembl chr 8:73,064,543...73,124,088
JBrowse link
G SDC2 syndecan 2 located_in HDA (PMID:27068509) BHF-UCL PMID:27068509 NCBI chr 8:96,493,813...96,611,790
Ensembl chr 8:96,493,813...96,611,790
JBrowse link
G SDC3 syndecan 3 located_in HDA (PMID:27068509) BHF-UCL PMID:27068509 NCBI chr 1:30,869,466...30,909,735
Ensembl chr 1:30,869,466...30,908,758
JBrowse link
G SEMA3B semaphorin 3B located_in HDA (PMID:25037231) BHF-UCL PMID:25037231 NCBI chr 3:50,267,652...50,277,546
Ensembl chr 3:50,267,558...50,277,546
JBrowse link
G SEMA7A semaphorin 7A (JohnMiltonHagen blood group) located_in HDA (PMID:28327460) BHF-UCL PMID:28327460 NCBI chr15:74,409,289...74,433,958
Ensembl chr15:74,409,289...74,433,958
JBrowse link
G SERPINA1 serpin family A member 1 located_in HDA (PMID:25037231), (PMID:28344315), (PMID:28675934) BHF-UCL PMID:25037231 PMID:28344315 PMID:28675934 NCBI chr14:94,376,747...94,390,635
Ensembl chr14:94,376,747...94,390,693
JBrowse link
G SERPINA3 serpin family A member 3 located_in HDA (PMID:28344315), (PMID:28675934) BHF-UCL PMID:28344315 PMID:28675934 NCBI chr14:94,612,391...94,624,053
Ensembl chr14:94,612,384...94,624,055
JBrowse link
G SERPINA5 serpin family A member 5 located_in HDA (PMID:28327460) BHF-UCL PMID:28327460 NCBI chr14:94,581,426...94,593,118
Ensembl chr14:94,561,442...94,593,118
JBrowse link
G SERPINB1 serpin family B member 1 located_in HDA (PMID:27559042), (PMID:28344315) BHF-UCL PMID:27559042 PMID:28344315 NCBI chr 6:2,832,332...2,841,863
Ensembl chr 6:2,832,332...2,841,959
JBrowse link
G SERPINB12 serpin family B member 12 located_in HDA (PMID:25037231) BHF-UCL PMID:25037231 NCBI chr18:63,519,110...63,569,329
Ensembl chr18:63,542,369...63,569,329
JBrowse link
G SERPINB6 serpin family B member 6 located_in HDA (PMID:28344315), (PMID:28675934) BHF-UCL PMID:28344315 PMID:28675934 NCBI chr 6:2,948,159...2,971,793
Ensembl chr 6:2,948,159...2,972,165
JBrowse link
G SERPINB8 serpin family B member 8 located_in HDA (PMID:28344315) BHF-UCL PMID:28344315 NCBI chr18:63,970,081...64,019,779
Ensembl chr18:63,970,029...64,019,779
JBrowse link
G SERPINB9 serpin family B member 9 located_in HDA (PMID:28344315) BHF-UCL PMID:28344315 NCBI chr 6:2,887,270...2,903,309
Ensembl chr 6:2,887,173...2,903,309
JBrowse link
G SERPINC1 serpin family C member 1 located_in HDA (PMID:25037231), (PMID:28675934) BHF-UCL PMID:25037231 PMID:28675934 NCBI chr 1:173,903,800...173,917,327
Ensembl chr 1:173,903,800...173,917,327
JBrowse link
G SERPINE1 serpin family E member 1 located_in IDA
HDA
(PMID:1632457)
(PMID:23979707), (PMID:28327460)
BHF-UCL PMID:1632457 PMID:23979707 PMID:28327460 NCBI chr 7:101,127,104...101,139,247
Ensembl chr 7:101,127,104...101,139,247
JBrowse link
G SERPINE2 serpin family E member 2 located_in IDA
HDA
(PMID:3279057)
(PMID:28327460)
BHF-UCL PMID:3279057 PMID:28327460 NCBI chr 2:223,975,045...224,039,286
Ensembl chr 2:223,975,045...224,039,318
JBrowse link
G SERPINF1 serpin family F member 1 located_in HDA (PMID:20551380), (PMID:28675934) BHF-UCL PMID:20551380 PMID:28675934 NCBI chr17:1,762,060...1,777,565
Ensembl chr17:1,762,029...1,777,565
JBrowse link
G SERPINF2 serpin family F member 2 located_in HDA (PMID:28675934) BHF-UCL PMID:28675934 NCBI chr17:1,742,871...1,755,265
Ensembl chr17:1,742,836...1,755,265
JBrowse link
G SERPING1 serpin family G member 1 located_in HDA (PMID:25037231), (PMID:28675934) BHF-UCL PMID:25037231 PMID:28675934 NCBI chr11:57,597,685...57,614,848
Ensembl chr11:57,597,387...57,619,171
JBrowse link
G SERPINH1 serpin family H member 1 located_in HDA (PMID:25037231), (PMID:28327460), (PMID:28675934) BHF-UCL PMID:25037231 PMID:28327460 PMID:28675934 NCBI chr11:75,562,253...75,572,783
Ensembl chr11:75,562,056...75,572,783
JBrowse link
G SFRP1 secreted frizzled related protein 1 located_in IDA
HDA
(PMID:10347172), (PMID:9192640)
(PMID:20551380), (PMID:27559042)
BHF-UCL PMID:9192640 PMID:10347172 PMID:20551380 PMID:27559042 NCBI chr 8:41,261,962...41,309,473
Ensembl chr 8:41,261,962...41,309,473
JBrowse link
G SFRP2 secreted frizzled related protein 2 located_in ISS BHF-UCL GO_REF:0000024 NCBI chr 4:153,780,591...153,789,083
Ensembl chr 4:153,780,591...153,789,083
JBrowse link
G SHH sonic hedgehog signaling molecule located_in HDA (PMID:28344315) BHF-UCL PMID:28344315 NCBI chr 7:155,799,980...155,812,463
Ensembl chr 7:155,799,980...155,812,463
JBrowse link
G SLPI secretory leukocyte peptidase inhibitor located_in HDA (PMID:20551380), (PMID:28675934) BHF-UCL PMID:20551380 PMID:28675934 NCBI chr20:45,252,239...45,254,564
Ensembl chr20:45,252,239...45,254,564
JBrowse link
G SNORC secondary ossification center associated regulator of chondrocyte maturation located_in ISO (PMID:28323137) UniProt PMID:28323137 NCBI chr 2:232,866,451...232,878,700
Ensembl chr 2:232,857,270...232,878,708
JBrowse link
G SOD3 superoxide dismutase 3 located_in ISO
HDA
IDA
(PMID:20551380), (PMID:27559042)
(PMID:9699963)
RGD
BHF-UCL
UniProt
PMID:9699963 PMID:16372329 PMID:20551380 PMID:27559042 RGD:1581086 NCBI chr 4:24,795,573...24,800,842
Ensembl chr 4:24,789,912...24,800,842
JBrowse link
G SOST sclerostin located_in HDA (PMID:20551380) BHF-UCL PMID:20551380 NCBI chr17:43,753,738...43,758,791
Ensembl chr17:43,753,738...43,758,791
JBrowse link
G SPARC secreted protein acidic and cysteine rich located_in HDA (PMID:28327460) BHF-UCL PMID:28327460 NCBI chr 5:151,661,096...151,686,915
Ensembl chr 5:151,661,096...151,686,975
JBrowse link
G SPOCK1 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 is_active_in HDA (PMID:27068509) GO_Central PMID:27068509 NCBI chr 5:136,975,298...137,499,326
Ensembl chr 5:136,975,298...137,598,379
JBrowse link
G SPON1 spondin 1 located_in HDA (PMID:20551380) BHF-UCL PMID:20551380 NCBI chr11:13,962,723...14,268,133
Ensembl chr11:13,962,723...14,268,133
JBrowse link
G SPP2 secreted phosphoprotein 2 located_in HDA (PMID:27559042) BHF-UCL PMID:27559042 NCBI chr 2:234,050,702...234,077,134
Ensembl chr 2:234,050,679...234,077,134
JBrowse link
G SRPX sushi repeat containing protein X-linked located_in HDA (PMID:25037231) BHF-UCL PMID:25037231 NCBI chr  X:38,149,339...38,220,871
Ensembl chr  X:38,149,336...38,220,924
JBrowse link
G SRPX2 sushi repeat containing protein X-linked 2 located_in HDA (PMID:25037231) BHF-UCL PMID:25037231 NCBI chr  X:100,644,199...100,675,788
Ensembl chr  X:100,644,195...100,675,788
JBrowse link
G SSC5D scavenger receptor cysteine rich family member with 5 domains located_in ISS UniProt GO_REF:0000024 NCBI chr19:55,488,436...55,519,099
Ensembl chr19:55,488,404...55,519,099
JBrowse link
G SULF1 sulfatase 1 located_in HDA (PMID:28327460) BHF-UCL PMID:28327460 NCBI chr 8:69,466,781...69,660,912
Ensembl chr 8:69,466,624...69,660,915
JBrowse link
G TGFB1 transforming growth factor beta 1 located_in ISO
HDA
(PMID:23979707) RGD
BHF-UCL
PMID:23979707 PMID:24224514 RGD:11073670 NCBI chr19:41,330,323...41,353,922
Ensembl chr19:41,301,587...41,353,922
JBrowse link
G TGFB1I1 transforming growth factor beta 1 induced transcript 1 located_in HDA (PMID:20551380) BHF-UCL PMID:20551380 NCBI chr16:31,472,152...31,477,960
Ensembl chr16:31,471,585...31,477,960
JBrowse link
G TGFB2 transforming growth factor beta 2 located_in IDA (PMID:18049952) BHF-UCL PMID:18049952 NCBI chr 1:218,345,336...218,444,619
Ensembl chr 1:218,345,336...218,444,619
JBrowse link
G TGFB3 transforming growth factor beta 3 located_in IDA (PMID:18049952) BHF-UCL PMID:18049952 NCBI chr14:75,958,097...75,983,011
Ensembl chr14:75,958,097...75,983,011
JBrowse link
G TGFBI transforming growth factor beta induced located_in ISS
HDA
(PMID:22261194)
(PMID:20551380), (PMID:23979707), (PMID:25037231), (PMID:27559042), (PMID:28327460), (PMID:28675934)
BHF-UCL PMID:20551380 PMID:22261194 PMID:23979707 PMID:25037231 PMID:27559042 More... NCBI chr 5:136,028,988...136,063,818
Ensembl chr 5:136,028,988...136,063,818
JBrowse link
G TGM2 transglutaminase 2 located_in HDA (PMID:23979707), (PMID:25037231), (PMID:28327460), (PMID:28675934) BHF-UCL PMID:23979707 PMID:25037231 PMID:28327460 PMID:28675934 NCBI chr20:38,127,385...38,168,475
Ensembl chr20:38,127,385...38,166,578
JBrowse link
G TGM4 transglutaminase 4 located_in
is_active_in
IDA
IBA
(PMID:20596668) UniProt
GO_Central
PMID:20596668 GO_REF:0000033 NCBI chr 3:44,874,608...44,914,990
Ensembl chr 3:44,874,608...44,914,990
JBrowse link
G THBS1 thrombospondin 1 located_in
is_active_in
TAS
IBA
ISS
HDA
(PMID:9304800)
(PMID:22261194)
(PMID:20551380), (PMID:23658023), (PMID:23979707), (PMID:28327460), (PMID:28344315)
BHF-UCL
GO_Central
PMID:9304800 PMID:20551380 PMID:22261194 PMID:23658023 PMID:23979707 More... GO_REF:0000033 NCBI chr15:39,581,079...39,599,466
Ensembl chr15:39,581,079...39,599,466
JBrowse link
G THBS2 thrombospondin 2 located_in
is_active_in
HDA
IBA
(PMID:28327460), (PMID:28675934) BHF-UCL
GO_Central
PMID:28327460 PMID:28675934 GO_REF:0000033 NCBI chr 6:169,215,785...169,253,846
Ensembl chr 6:169,215,780...169,254,050
JBrowse link
G THBS3 thrombospondin 3 located_in
is_active_in
HDA
IBA
(PMID:28327460) BHF-UCL
GO_Central
PMID:28327460 GO_REF:0000033 NCBI chr 1:155,195,588...155,209,178
Ensembl chr 1:155,195,588...155,209,051
JBrowse link
G THBS4 thrombospondin 4 located_in
is_active_in
ISS
IBA
UniProt
GO_Central
GO_REF:0000024 GO_REF:0000033 NCBI chr 5:79,991,332...80,083,287
Ensembl chr 5:79,991,311...80,083,287
JBrowse link
G THSD4 thrombospondin type 1 domain containing 4 located_in HDA (PMID:23979707), (PMID:25037231) BHF-UCL PMID:23979707 PMID:25037231 NCBI chr15:71,096,894...71,783,383
Ensembl chr15:71,096,952...71,783,383
JBrowse link
G TIMP2 TIMP metallopeptidase inhibitor 2 located_in HDA (PMID:23979707) BHF-UCL PMID:23979707 NCBI chr17:78,852,977...78,925,387
Ensembl chr17:78,852,977...78,925,387
JBrowse link
G TIMP3 TIMP metallopeptidase inhibitor 3 located_in HDA (PMID:20551380), (PMID:25037231), (PMID:27068509), (PMID:27559042), (PMID:28675934) BHF-UCL PMID:20551380 PMID:25037231 PMID:27068509 PMID:27559042 PMID:28675934 NCBI chr22:32,801,705...32,863,041
Ensembl chr22:32,801,705...32,863,041
JBrowse link
G TINAGL1 tubulointerstitial nephritis antigen like 1 located_in HDA (PMID:20551380), (PMID:23979707), (PMID:25037231), (PMID:27068509), (PMID:27559042), (PMID:28675934) BHF-UCL PMID:20551380 PMID:23979707 PMID:25037231 PMID:27068509 PMID:27559042 More... NCBI chr 1:31,576,515...31,587,686
Ensembl chr 1:31,576,485...31,587,686
JBrowse link
G TNC tenascin C located_in HDA
ISS
(PMID:20551380), (PMID:23658023), (PMID:25037231), (PMID:27559042), (PMID:28327460), (PMID:28675934)
(PMID:22261194)
UniProt
BHF-UCL
PMID:20551380 PMID:22261194 PMID:23658023 PMID:25037231 PMID:27559042 More... NCBI chr 9:115,019,575...115,118,157
Ensembl chr 9:115,019,575...115,118,207
JBrowse link
G TNN tenascin N is_active_in
located_in
IBA
ISO
(PMID:14709716) GO_Central
ComplexPortal
PMID:14709716 GO_REF:0000033 NCBI chr 1:175,067,833...175,148,075
Ensembl chr 1:175,067,833...175,148,075
JBrowse link
G TNR tenascin R is_active_in
located_in
IBA
ISO
(PMID:8244531) GO_Central
ComplexPortal
PMID:8244531 GO_REF:0000033 NCBI chr 1:175,315,194...175,743,595
Ensembl chr 1:175,315,194...175,743,595
JBrowse link
G TNXB tenascin XB located_in
is_active_in
HDA
IBA
ISS
(PMID:20551380), (PMID:25037231), (PMID:27559042), (PMID:28327460), (PMID:28675934)
(PMID:22261194)
BHF-UCL
GO_Central
PMID:20551380 PMID:22261194 PMID:25037231 PMID:27559042 PMID:28327460 More... GO_REF:0000033 NCBI chr 6:32,041,153...32,109,338
Ensembl chr 6:32,041,153...32,115,334
JBrowse link
G TPSAB1 tryptase alpha/beta 1 located_in HDA (PMID:20551380) BHF-UCL PMID:20551380 NCBI chr16:1,240,705...1,242,554
Ensembl chr16:1,239,266...1,242,554
JBrowse link
G TPSB2 tryptase beta 2 located_in HDA (PMID:27559042) BHF-UCL PMID:27559042 NCBI chr16:1,228,336...1,230,184
Ensembl chr16:1,227,272...1,232,757
JBrowse link
G VCAN versican located_in ISO
ISS
HDA
(PMID:22261194)
(PMID:20551380), (PMID:23658023), (PMID:25037231), (PMID:27559042), (PMID:28327460), (PMID:28675934)
RGD
BHF-UCL
PMID:12586779 PMID:20551380 PMID:22261194 PMID:23658023 PMID:25037231 More... RGD:1299255 NCBI chr 5:83,471,744...83,582,302
Ensembl chr 5:83,471,618...83,582,303
JBrowse link
G VTN vitronectin is_active_in
located_in
ISO
IBA
HDA
ISS
IDA
(PMID:20551380), (PMID:25037231), (PMID:27559042), (PMID:28327460), (PMID:28675934)
(PMID:22261194)
(PMID:1632457)
RGD
GO_Central
BHF-UCL
PMID:1632457 PMID:2426279 PMID:20551380 PMID:22261194 PMID:25037231 More... GO_REF:0000033 RGD:10003088 NCBI chr17:28,367,284...28,370,307
Ensembl chr17:28,367,284...28,373,091
JBrowse link
G VWA1 von Willebrand factor A domain containing 1 located_in
is_active_in
HDA
IBA
(PMID:25037231), (PMID:27068509), (PMID:28327460) BHF-UCL
GO_Central
PMID:25037231 PMID:27068509 PMID:28327460 GO_REF:0000033 NCBI chr 1:1,435,690...1,442,882
Ensembl chr 1:1,434,861...1,442,882
JBrowse link
G VWF von Willebrand factor located_in ISO
HDA
IDA
(PMID:23979707), (PMID:25037231), (PMID:28675934)
(PMID:6754744)
RGD
BHF-UCL
UniProt
PMID:6754744 PMID:14762664 PMID:23979707 PMID:25037231 PMID:28675934 RGD:1599021 NCBI chr12:5,948,877...6,124,670
Ensembl chr12:5,948,877...6,124,770
JBrowse link
G WNT2 Wnt family member 2 located_in IDA (PMID:15507471) UniProt PMID:15507471 NCBI chr 7:117,275,451...117,323,058
Ensembl chr 7:117,275,451...117,323,152
JBrowse link
G WNT2B Wnt family member 2B located_in HDA (PMID:25037231) BHF-UCL PMID:25037231 NCBI chr 1:112,466,541...112,530,165
Ensembl chr 1:112,466,541...112,530,165
JBrowse link
G WNT5A Wnt family member 5A located_in HDA (PMID:28327460) BHF-UCL PMID:28327460 NCBI chr 3:55,465,715...55,505,263
Ensembl chr 3:55,465,715...55,490,539
JBrowse link
G WNT5B Wnt family member 5B located_in HDA (PMID:28327460) BHF-UCL PMID:28327460 NCBI chr12:1,617,056...1,647,212
Ensembl chr12:1,529,891...1,647,212
JBrowse link
G WNT8A Wnt family member 8A located_in ISS BHF-UCL GO_REF:0000024 NCBI chr 5:138,077,367...138,092,365
Ensembl chr 5:138,083,990...138,092,365
JBrowse link
G ZG16 zymogen granule protein 16 located_in IDA (PMID:17307141) UniProt PMID:17307141 NCBI chr16:29,778,256...29,782,973
Ensembl chr16:29,778,256...29,782,973
JBrowse link
G ZP1 zona pellucida glycoprotein 1 is_active_in
located_in
IBA
ISO
(PMID:11906903) GO_Central
UniProt
PMID:11906903 GO_REF:0000033 NCBI chr11:60,867,542...60,875,687
Ensembl chr11:60,867,542...60,875,693
JBrowse link
G ZP2 zona pellucida glycoprotein 2 located_in
is_active_in
ISS
IBA
UniProt
GO_Central
GO_REF:0000024 GO_REF:0000033 NCBI chr16:21,197,450...21,214,510
Ensembl chr16:21,197,450...21,214,510
JBrowse link
G ZP3 zona pellucida glycoprotein 3 located_in IDA
HDA
(PMID:19246320)
(PMID:28344315)
UniProt
BHF-UCL
PMID:19246320 PMID:28344315 NCBI chr 7:76,397,522...76,442,069
Ensembl chr 7:76,397,518...76,442,071
JBrowse link
G ZP4 zona pellucida glycoprotein 4 is_active_in IBA GO_Central GO_REF:0000033 NCBI chr 1:237,882,404...237,890,922
Ensembl chr 1:237,877,864...237,890,922
JBrowse link
basement membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAN aggrecan located_in ISO (PMID:16061471) MGI PMID:16061471 NCBI chr15:88,803,436...88,875,353
Ensembl chr15:88,803,436...88,875,353
JBrowse link
G ACHE acetylcholinesterase (Yt blood group) located_in NAS
IEA
(PMID:16289501) HGNC-UCL
Ensembl
PMID:16289501 GO_REF:0000107 NCBI chr 7:100,889,994...100,896,994
Ensembl chr 7:100,889,994...100,896,974
JBrowse link
G ACTA2 actin alpha 2, smooth muscle located_in ISO
IEA
MMO:0000538 RGD
Ensembl
PMID:30476341 GO_REF:0000107 RGD:151893502 NCBI chr10:88,935,074...88,991,337
Ensembl chr10:88,934,822...88,991,339
JBrowse link
G ADAMTS1 ADAM metallopeptidase with thrombospondin type 1 motif 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr21:26,835,755...26,845,409
Ensembl chr21:26,835,755...26,845,409
JBrowse link
G AGRN agrin located_in ISO
IEA
TAS
IDA
(PMID:1326608)
(PMID:9405491)
RGD
Ensembl
UniProt
PMID:1326608 PMID:9405491 PMID:11470186 PMID:15711988 GO_REF:0000107 GO_REF:0000117 RGD:11556219 RGD:1578369 (All species) (All species) NCBI chr 1:1,020,120...1,056,116
Ensembl chr 1:1,020,120...1,056,119
JBrowse link
G ALB albumin ISO RGD PMID:1723977 RGD:1625719 NCBI chr 4:73,404,287...73,421,482
Ensembl chr 4:73,397,114...73,421,482
JBrowse link
G AMELX amelogenin X-linked located_in IEA Ensembl GO_REF:0000107 NCBI chr  X:11,293,413...11,309,588
Ensembl chr  X:11,293,413...11,300,761
JBrowse link
G AMTN amelotin located_in
is_active_in
ISS
IBA
IEA
(PMID:16787391) HGNC-UCL
GO_Central
Ensembl
PMID:16787391 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:70,518,569...70,532,743
Ensembl chr 4:70,518,569...70,532,743
JBrowse link
G ANG angiogenin located_in IDA (PMID:15166501) UniProt PMID:15166501 NCBI chr14:20,684,177...20,694,186
Ensembl chr14:20,684,177...20,698,971
JBrowse link
G ANXA2 annexin A2 located_in IEA UniProt GO_REF:0000043 GO_REF:0000044 NCBI chr15:60,347,151...60,397,986
Ensembl chr15:60,347,134...60,402,883
JBrowse link
G ANXA2P2 annexin A2 pseudogene 2 located_in IEA UniProt GO_REF:0000043 GO_REF:0000044 NCBI chr 9:33,624,225...33,625,534
Ensembl chr 9:33,624,274...33,625,293
JBrowse link
G APLP1 amyloid beta precursor like protein 1 located_in TAS (PMID:9521588) PINC PMID:9521588 NCBI chr19:35,868,574...35,879,792
Ensembl chr19:35,867,899...35,879,803
JBrowse link
G CASK calcium/calmodulin dependent serine protein kinase part_of
located_in
IDA
IEA
(PMID:18664494) CACAO
Ensembl
BHF-UCL
PMID:18664494 GO_REF:0000107 NCBI chr  X:41,514,934...41,923,554
Ensembl chr  X:41,514,934...41,923,554
JBrowse link
G CCDC80 coiled-coil domain containing 80 located_in
is_active_in
IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr 3:112,596,797...112,641,143
Ensembl chr 3:112,596,797...112,649,530
JBrowse link
G CD151 CD151 molecule (Raph blood group) part_of IDA (PMID:23302890) CACAO PMID:23302890 NCBI chr11:832,952...838,831
Ensembl chr11:832,887...839,831
JBrowse link
G COL13A1 collagen type XIII alpha 1 chain is_active_in IBA GO_Central GO_REF:0000033 NCBI chr10:69,801,906...69,959,144
Ensembl chr10:69,801,880...69,964,275
JBrowse link
G COL15A1 collagen type XV alpha 1 chain located_in
is_active_in
IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr 9:98,943,907...99,070,787
Ensembl chr 9:98,943,179...99,070,787
JBrowse link
G COL16A1 collagen type XVI alpha 1 chain is_active_in IBA GO_Central GO_REF:0000033 NCBI chr 1:31,652,263...31,704,017
Ensembl chr 1:31,652,263...31,704,319
JBrowse link
G COL17A1 collagen type XVII alpha 1 chain located_in IEA UniProt GO_REF:0000043 GO_REF:0000044 NCBI chr10:104,031,286...104,085,880
Ensembl chr10:104,031,286...104,085,880
JBrowse link
G COL18A1 collagen type XVIII alpha 1 chain located_in IEA UniProt GO_REF:0000043 GO_REF:0000044 NCBI chr21:45,405,165...45,513,720
Ensembl chr21:45,405,165...45,513,720
JBrowse link
G COL22A1 collagen type XXII alpha 1 chain is_active_in IBA GO_Central GO_REF:0000033 NCBI chr 8:138,588,235...138,914,041
Ensembl chr 8:138,588,235...138,914,041
JBrowse link
G COL24A1 collagen type XXIV alpha 1 chain is_active_in IBA GO_Central GO_REF:0000033 NCBI chr 1:85,729,233...86,156,984
Ensembl chr 1:85,729,233...86,156,943
JBrowse link
G COL28A1 collagen type XXVIII alpha 1 chain located_in IEA Ensembl
UniProt
GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 NCBI chr 7:7,338,194...7,543,870
Ensembl chr 7:7,356,203...7,535,873
JBrowse link
G COL2A1 collagen type II alpha 1 chain located_in IEA Ensembl GO_REF:0000107 NCBI chr12:47,972,967...48,006,212
Ensembl chr12:47,972,967...48,004,554
JBrowse link
G COL4A1 collagen type IV alpha 1 chain located_in IEA
IC
(PMID:23065703) UniProt
Ensembl
BHF-UCL
PMID:23065703 GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 NCBI chr13:110,148,963...110,307,157
Ensembl chr13:110,148,963...110,307,202
JBrowse link
G COL4A2 collagen type IV alpha 2 chain located_in IEA
ISO
Ensembl
RGD
UniProt
PMID:11470186 GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 RGD:11556219 (All species) (All species) NCBI chr13:110,307,284...110,513,209
Ensembl chr13:110,305,812...110,513,209
JBrowse link
G COL4A3 collagen type IV alpha 3 chain located_in
is_active_in
IEA
IBA
IDA
(PMID:10766752) Ensembl
GO_Central
UniProt
PMID:10766752 GO_REF:0000033 GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 NCBI chr 2:227,164,624...227,314,792
Ensembl chr 2:227,164,624...227,314,792
JBrowse link
G COL4A4 collagen type IV alpha 4 chain located_in IEA
IDA
(PMID:2211832) UniProt
Ensembl
PMID:2211832 GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 NCBI chr 2:226,967,360...227,164,488
Ensembl chr 2:227,002,714...227,164,453
JBrowse link
G COL4A5 collagen type IV alpha 5 chain located_in IEA Ensembl
UniProt
GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 NCBI chr  X:108,439,838...108,697,545
Ensembl chr  X:108,439,838...108,697,545
JBrowse link
G COL4A6 collagen type IV alpha 6 chain located_in IEA Ensembl
UniProt
GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 NCBI chr  X:108,155,614...108,439,458
Ensembl chr  X:108,155,607...108,439,497
JBrowse link
G COL5A1 collagen type V alpha 1 chain located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:134,641,803...134,844,843
Ensembl chr 9:134,641,803...134,844,843
JBrowse link
G COL6A1 collagen type VI alpha 1 chain is_active_in IEA Ensembl GO_REF:0000107 NCBI chr21:45,981,770...46,005,048
Ensembl chr21:45,981,770...46,005,050
JBrowse link
G COL7A1 collagen type VII alpha 1 chain located_in
is_active_in
IEA
IBA
TAS
(PMID:9375848) UniProt
GO_Central
PINC
PMID:9375848 GO_REF:0000033 GO_REF:0000043 GO_REF:0000044 NCBI chr 3:48,564,073...48,595,329
Ensembl chr 3:48,564,073...48,595,329
JBrowse link
G COL8A1 collagen type VIII alpha 1 chain located_in IEA UniProt GO_REF:0000043 GO_REF:0000044 NCBI chr 3:99,638,594...99,799,217
Ensembl chr 3:99,638,475...99,799,226
JBrowse link
G COL8A2 collagen type VIII alpha 2 chain located_in IEA
NAS
(PMID:2019595) UniProt PMID:2019595 GO_REF:0000043 GO_REF:0000044 NCBI chr 1:36,095,239...36,125,222
Ensembl chr 1:36,095,239...36,125,222
JBrowse link
G COL9A3 collagen type IX alpha 3 chain is_active_in IBA GO_Central GO_REF:0000033 NCBI chr20:62,816,213...62,841,159
Ensembl chr20:62,816,244...62,841,159
JBrowse link
G COLQ collagen like tail subunit of asymmetric acetylcholinesterase located_in TAS (PMID:9689136) PINC PMID:9689136 NCBI chr 3:15,450,133...15,521,706
Ensembl chr 3:15,450,133...15,521,751
JBrowse link
G CST3 cystatin C ISO RGD PMID:15872057 RGD:2306505 NCBI chr20:23,626,706...23,637,955
Ensembl chr20:23,626,706...23,638,473
JBrowse link
G DAG1 dystroglycan 1 located_in
is_active_in
IDA
IBA
IEA
(PMID:19348877) UniProt
GO_Central
Ensembl
PMID:19348877 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:49,468,948...49,535,615
Ensembl chr 3:49,468,713...49,535,618
JBrowse link
G DLG1 discs large MAGUK scaffold protein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:197,042,560...197,299,321
Ensembl chr 3:197,042,560...197,299,330
JBrowse link
G DST dystonin located_in TAS (PMID:2461961) PINC PMID:2461961 NCBI chr 6:56,457,996...56,954,830
Ensembl chr 6:56,457,987...56,954,830
JBrowse link
G EFEMP1 EGF containing fibulin extracellular matrix protein 1 ISO RGD PMID:18803302 RGD:10401659 NCBI chr 2:55,865,967...55,923,782
Ensembl chr 2:55,865,967...55,924,139
JBrowse link
G EFEMP2 EGF containing fibulin extracellular matrix protein 2 located_in ISS
IEA
TAS
(PMID:10601734) UniProt
Ensembl
PINC
PMID:10601734 GO_REF:0000024 GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 NCBI chr11:65,866,441...65,872,800
Ensembl chr11:65,866,441...65,873,592
JBrowse link
G EFNA5 ephrin A5 located_in IEA Ensembl GO_REF:0000107 NCBI chr 5:107,376,894...107,670,937
Ensembl chr 5:107,376,894...107,670,937
JBrowse link
G EGFL6 EGF like domain multiple 6 located_in IEA UniProt
Ensembl
GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 NCBI chr  X:13,569,601...13,633,575
Ensembl chr  X:13,569,601...13,633,575
JBrowse link
G EGFLAM EGF like, fibronectin type III and laminin G domains located_in IEA Ensembl
UniProt
GO_REF:0000107 GO_REF:0000117 NCBI chr 5:38,258,559...38,465,480
Ensembl chr 5:38,258,409...38,465,480
JBrowse link
G ENTPD1 ectonucleoside triphosphate diphosphohydrolase 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr10:95,694,186...95,877,266
Ensembl chr10:95,711,779...95,877,266
JBrowse link
G ENTPD2 ectonucleoside triphosphate diphosphohydrolase 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:137,048,107...137,054,061
Ensembl chr 9:137,048,107...137,054,061
JBrowse link
G ERBIN erbb2 interacting protein located_in TAS (PMID:10878805) PINC PMID:10878805 NCBI chr 5:65,926,575...66,082,546
Ensembl chr 5:65,883,128...66,082,546
JBrowse link
G FAT2 FAT atypical cadherin 2 located_in IEA UniProt GO_REF:0000117 NCBI chr 5:151,504,092...151,594,819
Ensembl chr 5:151,504,092...151,591,331
JBrowse link
G FAT4 FAT atypical cadherin 4 located_in IEA UniProt GO_REF:0000117 NCBI chr 4:125,314,955...125,492,932
Ensembl chr 4:125,314,918...125,492,932
JBrowse link
G FBLN1 fibulin 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr22:45,502,883...45,601,135
Ensembl chr22:45,502,238...45,601,135
JBrowse link
G FBN1 fibrillin 1 located_in IDA (PMID:3536967) UniProt PMID:3536967 NCBI chr15:48,408,313...48,645,709
Ensembl chr15:48,408,313...48,645,721
JBrowse link
G FGF9 fibroblast growth factor 9 ISO ovarian granulosa cells and follicles; seminiferous tubules RGD PMID:17494997 RGD:2289861 NCBI chr13:21,671,073...21,704,498
Ensembl chr13:21,671,073...21,704,498
JBrowse link
G FN1 fibronectin 1 located_in ISO
IEA
RGD
Ensembl
PMID:14656002 GO_REF:0000107 RGD:1578551 NCBI chr 2:215,360,865...215,436,068
Ensembl chr 2:215,360,440...215,436,073
JBrowse link
G FRAS1 Fraser extracellular matrix complex subunit 1 located_in ISS
IEA
BHF-UCL
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 4:78,057,323...78,544,269
Ensembl chr 4:78,057,323...78,544,269
JBrowse link
G FREM1 FRAS1 related extracellular matrix 1 located_in IEA UniProt
Ensembl
GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 NCBI chr 9:14,737,152...14,910,995
Ensembl chr 9:14,737,152...14,910,995
JBrowse link
G FREM2 FRAS1 related extracellular matrix 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr13:38,687,077...38,887,131
Ensembl chr13:38,687,077...38,887,131
JBrowse link
G FREM3 FRAS1 related extracellular matrix 3 located_in ISS BHF-UCL GO_REF:0000024 NCBI chr 4:143,577,302...143,700,675
Ensembl chr 4:143,577,302...143,700,675
JBrowse link
G GSTO1 glutathione S-transferase omega 1 ISO RGD PMID:11311527 RGD:5490519 NCBI chr10:104,254,173...104,267,455
Ensembl chr10:104,235,356...104,267,459
JBrowse link
G HMCN1 hemicentin 1 located_in IEA
ISS
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 NCBI chr 1:185,734,391...186,190,949
Ensembl chr 1:185,734,391...186,190,949
JBrowse link
G HMCN2 hemicentin 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:130,265,760...130,434,123
Ensembl chr 9:130,265,760...130,434,123
JBrowse link
G HSPG2 heparan sulfate proteoglycan 2 located_in IEA
ISO
TAS
(PMID:21126803), (PMID:8621634) UniProt
RGD
ARUK-UCL
PMID:8621634 PMID:11470186 PMID:21126803 GO_REF:0000043 GO_REF:0000044 GO_REF:0000117 RGD:11556219 (All species) (All species) NCBI chr 1:21,822,244...21,937,310
Ensembl chr 1:21,822,244...21,937,310
JBrowse link
G ITGA6 integrin subunit alpha 6 located_in ISO (PMID:9524190) MGI PMID:9524190 NCBI chr 2:172,427,336...172,506,459
Ensembl chr 2:172,234,216...172,506,459
JBrowse link
G ITGB1 integrin subunit beta 1 ISO RGD PMID:9202984 PMID:18596883 RGD:1581320 RGD:2325689 NCBI chr10:32,900,318...32,958,230
Ensembl chr10:32,887,273...33,005,792
JBrowse link
G ITGB4 integrin subunit beta 4 located_in IEA Ensembl GO_REF:0000107 NCBI chr17:75,721,459...75,757,818
Ensembl chr17:75,721,328...75,757,818
JBrowse link
G LAD1 ladinin 1 located_in IEA UniProt GO_REF:0000043 GO_REF:0000044 GO_REF:0000104 NCBI chr 1:201,380,833...201,399,324
Ensembl chr 1:201,380,833...201,399,915
JBrowse link
G LAMA1 laminin subunit alpha 1 located_in IEA
NAS
IDA
(PMID:1678389)
(PMID:10964500), (PMID:2099832)
Ensembl
ComplexPortal
UniProt
PMID:1678389 PMID:2099832 PMID:10964500 GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 GO_REF:0000117 NCBI chr18:6,941,742...7,117,797
Ensembl chr18:6,941,742...7,117,797
JBrowse link
G LAMA2 laminin subunit alpha 2 located_in ISO
NAS
IEA
TAS
IDA
(PMID:1678389)
(PMID:2185464)
(PMID:14557481), (PMID:2099832)
RGD
ComplexPortal
UniProt
Ensembl
PINC
PMID:1678389 PMID:2099832 PMID:2185464 PMID:11271373 PMID:14557481 GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 GO_REF:0000117 RGD:1600203 NCBI chr 6:128,883,138...129,516,566
Ensembl chr 6:128,883,138...129,516,566
JBrowse link
G LAMA3 laminin subunit alpha 3 located_in TAS
IEA
(PMID:8586427) PINC
UniProt
Ensembl
PMID:8586427 GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 GO_REF:0000117 NCBI chr18:23,689,453...23,955,066
Ensembl chr18:23,689,453...23,956,222
JBrowse link
G LAMA4 laminin subunit alpha 4 located_in TAS
IEA
IDA
(PMID:7959779)
(PMID:14557481)
PINC
UniProt
PMID:7959779 PMID:14557481 GO_REF:0000043 GO_REF:0000044 GO_REF:0000117 NCBI chr 6:112,107,931...112,254,985
Ensembl chr 6:112,107,931...112,254,939
JBrowse link
G LAMA5 laminin subunit alpha 5 located_in
is_active_in
IDA
ISO
IEA
NAS
(PMID:14557481)
(PMID:10651091)
(PMID:11821406)
UniProt
MGI
Ensembl
PMID:10651091 PMID:11821406 PMID:14557481 GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 GO_REF:0000117 NCBI chr20:62,309,065...62,367,312
Ensembl chr20:62,307,955...62,367,312
JBrowse link
G LAMB1 laminin subunit beta 1 located_in TAS
IEA
NAS
IDA
(PMID:3493487)
(PMID:1678389)
(PMID:14557481), (PMID:2099832)
UniProt
Ensembl
ComplexPortal
PMID:1678389 PMID:2099832 PMID:3493487 PMID:14557481 GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 NCBI chr 7:107,923,799...108,003,161
Ensembl chr 7:107,923,799...108,003,213
JBrowse link
G LAMB2 laminin subunit beta 2 located_in IEA
NAS
IDA
TAS
(PMID:1678389)
(PMID:10964500), (PMID:14557481), (PMID:2099832)
(PMID:7698745)
Ensembl
ComplexPortal
UniProt
PINC
PMID:1678389 PMID:2099832 PMID:7698745 PMID:10964500 PMID:14557481 GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 NCBI chr 3:49,121,114...49,133,050
Ensembl chr 3:49,121,114...49,133,118
JBrowse link
G LAMB3 laminin subunit beta 3 located_in IEA UniProt
Ensembl
GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 NCBI chr 1:209,614,870...209,652,425
Ensembl chr 1:209,614,870...209,652,425
JBrowse link
G LAMB4 laminin subunit beta 4 located_in IEA UniProt GO_REF:0000043 GO_REF:0000044 NCBI chr 7:108,011,662...108,130,361
Ensembl chr 7:108,023,548...108,130,361
JBrowse link
G LAMC1 laminin subunit gamma 1 located_in TAS
NAS
IEA
IDA
(PMID:9885251)
(PMID:1678389)
(PMID:14557481), (PMID:15159456), (PMID:22952693)
PINC
ComplexPortal
UniProt
BHF-UCL
PMID:1678389 PMID:9885251 PMID:14557481 PMID:15159456 PMID:22952693 GO_REF:0000043 GO_REF:0000044 NCBI chr 1:183,023,420...183,145,592
Ensembl chr 1:183,023,420...183,145,592
JBrowse link
G LAMC2 laminin subunit gamma 2 located_in IEA UniProt GO_REF:0000043 GO_REF:0000044 NCBI chr 1:183,186,264...183,258,968
Ensembl chr 1:183,186,238...183,245,127
JBrowse link
G LAMC3 laminin subunit gamma 3 located_in IEA UniProt
Ensembl
GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 NCBI chr 9:131,009,174...131,094,473
Ensembl chr 9:131,009,174...131,094,473
JBrowse link
G LOXL1 lysyl oxidase like 1 located_in ISO
IEA
RGD
Ensembl
PMID:22382377 GO_REF:0000107 RGD:7394733 NCBI chr15:73,926,462...73,952,136
Ensembl chr15:73,925,989...73,952,137
JBrowse link
G LOXL2 lysyl oxidase like 2 located_in IEA
ISS
UniProt GO_REF:0000024 GO_REF:0000043 GO_REF:0000044 NCBI chr 8:23,296,897...23,404,120
Ensembl chr 8:23,296,897...23,425,328
JBrowse link
G MATN2 matrilin 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr 8:97,869,064...98,036,724
Ensembl chr 8:97,868,840...98,036,724
JBrowse link
G MEGF9 multiple EGF like domains 9 located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:120,600,811...120,714,470
Ensembl chr 9:120,600,811...120,714,470
JBrowse link
G MMRN2 multimerin 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr10:86,935,540...86,957,615
Ensembl chr10:86,935,540...86,969,481
JBrowse link
G NID1 nidogen 1 located_in IDA
NAS
IEA
(PMID:22952693)
(PMID:1678389)
BHF-UCL
ComplexPortal
UniProt
Ensembl
PMID:1678389 PMID:22952693 GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 NCBI chr 1:235,975,830...236,065,090
Ensembl chr 1:235,975,830...236,065,109
JBrowse link
G NID2 nidogen 2 located_in
is_active_in
IEA
IBA
IDA
TAS
(PMID:22952693)
(PMID:9733643)
UniProt
GO_Central
BHF-UCL
Ensembl
PINC
PMID:9733643 PMID:22952693 GO_REF:0000033 GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 NCBI chr14:52,004,809...52,069,059
Ensembl chr14:52,004,809...52,069,059
JBrowse link
G NPHS1 NPHS1 adhesion molecule, nephrin ISO MMO:0000686 RGD PMID:21876538 RGD:38599163 NCBI chr19:35,862,915...35,869,357
Ensembl chr19:35,825,964...35,869,287
JBrowse link
G NPNT nephronectin located_in IEA Ensembl GO_REF:0000107 NCBI chr 4:105,895,471...105,971,671
Ensembl chr 4:105,894,775...106,004,027
JBrowse link
G NTN1 netrin 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr17:9,003,087...9,244,000
Ensembl chr17:9,021,510...9,244,000
JBrowse link
G NTN4 netrin 4 located_in IEA UniProt
Ensembl
GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 NCBI chr12:95,657,807...95,791,155
Ensembl chr12:95,657,807...95,791,189
JBrowse link
G P3H1 prolyl 3-hydroxylase 1 located_in ISO PMID:10455179 MGI PMID:10455179 RGD:633221 NCBI chr 1:42,746,374...42,767,028
Ensembl chr 1:42,746,335...42,767,084
JBrowse link
G P3H2 prolyl 3-hydroxylase 2 located_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 3:189,956,728...190,122,278
Ensembl chr 3:189,956,728...190,122,437
JBrowse link
G PAPLN papilin, proteoglycan like sulfated glycoprotein located_in ISO (PMID:18757743) MGI PMID:18757743 NCBI chr14:73,235,805...73,274,623
Ensembl chr14:73,237,497...73,274,640
JBrowse link
G PTN pleiotrophin ISO RGD PMID:9990431 RGD:10044215 NCBI chr 7:137,227,341...137,343,733
Ensembl chr 7:137,227,341...137,343,774
JBrowse link
G PXDN peroxidasin located_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 NCBI chr 2:1,631,887...1,744,901
Ensembl chr 2:1,631,887...1,744,852
JBrowse link
G RELL2 RELT like 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr 5:141,636,997...141,641,064
Ensembl chr 5:141,636,950...141,641,064
JBrowse link
G RPSA ribosomal protein SA ISO RGD PMID:11553521 RGD:2299067 NCBI chr 3:39,406,720...39,412,542
Ensembl chr 3:39,406,716...39,426,255
JBrowse link
G RUNX1 RUNX family transcription factor 1 located_in ISO (PMID:17011173) MGI PMID:17011173 NCBI chr21:34,787,801...35,049,302
Ensembl chr21:34,787,801...36,004,667
JBrowse link
G SERPINF1 serpin family F member 1 located_in ISO
IEA
RGD
Ensembl
PMID:15616035 GO_REF:0000107 RGD:1359799 NCBI chr17:1,762,060...1,777,565
Ensembl chr17:1,762,029...1,777,565
JBrowse link
G SMC3 structural maintenance of chromosomes 3 ISO RGD PMID:9015313 RGD:61563 NCBI chr10:110,567,695...110,606,048
Ensembl chr10:110,567,684...110,606,048
JBrowse link
G SMOC1 SPARC related modular calcium binding 1 located_in
is_active_in
IEA
IBA
UniProt
GO_Central
GO_REF:0000033 GO_REF:0000043 GO_REF:0000044 NCBI chr14:69,879,416...70,032,366
Ensembl chr14:69,854,131...70,032,366
JBrowse link
G SMOC2 SPARC related modular calcium binding 2 located_in
is_active_in
IEA
IBA
UniProt
GO_Central
GO_REF:0000033 GO_REF:0000043 GO_REF:0000044 NCBI chr 6:168,441,184...168,667,992
Ensembl chr 6:168,441,151...168,673,445
JBrowse link
G SPARC secreted protein acidic and cysteine rich located_in IEA UniProt GO_REF:0000043 GO_REF:0000044 NCBI chr 5:151,661,096...151,686,915
Ensembl chr 5:151,661,096...151,686,975
JBrowse link
G SPN sialophorin located_in IEA Ensembl GO_REF:0000107 NCBI chr16:29,662,963...29,670,876
Ensembl chr16:29,662,979...29,670,876
JBrowse link
G TF transferrin ISO RGD PMID:1723977 RGD:1625719 NCBI chr 3:133,661,998...133,796,641
Ensembl chr 3:133,746,040...133,796,641
JBrowse link
G TGFB2 transforming growth factor beta 2 ISO RGD PMID:16479080 RGD:2302094 NCBI chr 1:218,345,336...218,444,619
Ensembl chr 1:218,345,336...218,444,619
JBrowse link
G TGFBI transforming growth factor beta induced located_in ISO
IEA
RGD
Ensembl
PMID:12911551 GO_REF:0000107 RGD:1304421 NCBI chr 5:136,028,988...136,063,818
Ensembl chr 5:136,028,988...136,063,818
JBrowse link
G THBS2 thrombospondin 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr 6:169,215,785...169,253,846
Ensembl chr 6:169,215,780...169,254,050
JBrowse link
G THBS4 thrombospondin 4 located_in IDA (PMID:17927980) UniProt PMID:17927980 NCBI chr 5:79,991,332...80,083,287
Ensembl chr 5:79,991,311...80,083,287
JBrowse link
G TIMP1 TIMP metallopeptidase inhibitor 1 located_in ISO
IEA
RGD
Ensembl
PMID:9579471 GO_REF:0000107 RGD:2290365 NCBI chr  X:47,582,436...47,586,789
Ensembl chr  X:47,582,408...47,586,789
JBrowse link
G TIMP2 TIMP metallopeptidase inhibitor 2 located_in ISO (PMID:12950084) MGI PMID:12950084 NCBI chr17:78,852,977...78,925,387
Ensembl chr17:78,852,977...78,925,387
JBrowse link
G TIMP3 TIMP metallopeptidase inhibitor 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr22:32,801,705...32,863,041
Ensembl chr22:32,801,705...32,863,041
JBrowse link
G TINAG tubulointerstitial nephritis antigen located_in IEA
IDA
(PMID:1762287) UniProt PMID:1762287 GO_REF:0000043 GO_REF:0000044 NCBI chr 6:54,307,862...54,390,142
Ensembl chr 6:54,307,859...54,390,142
JBrowse link
G TNC tenascin C located_in IEA
ISO
Ensembl
ComplexPortal
GO_REF:0000107 GO_REF:0000114 NCBI chr 9:115,019,575...115,118,157
Ensembl chr 9:115,019,575...115,118,207
JBrowse link
G USH2A usherin located_in IEA
IDA
(PMID:12433396) Ensembl
HGNC-UCL
PMID:12433396 GO_REF:0000107 NCBI chr 1:215,622,891...216,423,448
Ensembl chr 1:215,622,891...216,423,448
JBrowse link
G VEGFA vascular endothelial growth factor A ISO RGD PMID:11940521 RGD:628330 NCBI chr 6:43,770,211...43,786,487
Ensembl chr 6:43,770,184...43,786,487
JBrowse link
G VTN vitronectin located_in ISO
IEA
RGD
Ensembl
PMID:11728964 GO_REF:0000107 RGD:10003096 NCBI chr17:28,367,284...28,370,307
Ensembl chr17:28,367,284...28,373,091
JBrowse link
G VWA1 von Willebrand factor A domain containing 1 located_in IEA UniProt
Ensembl
GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 NCBI chr 1:1,435,690...1,442,882
Ensembl chr 1:1,434,861...1,442,882
JBrowse link
G VWA2 von Willebrand factor A domain containing 2 located_in
is_active_in
IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr10:114,239,254...114,294,500
Ensembl chr10:114,239,254...114,294,489
JBrowse link
G VWC2 von Willebrand factor C domain containing 2 located_in IEA UniProt
Ensembl
GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 NCBI chr 7:49,773,638...49,922,205
Ensembl chr 7:49,773,638...49,921,950
JBrowse link
collagen type I trimer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COL1A1 collagen type I alpha 1 chain part_of IMP
IPI
IEA
NAS
IDA
(PMID:14976317), (PMID:17576241)
(PMID:26848503), (PMID:28281531)
(PMID:1939261)
(PMID:19932771)
UniProt
ComplexPortal
Ensembl
CAFA
PMID:1939261 PMID:14976317 PMID:17576241 PMID:19932771 PMID:26848503 More... GO_REF:0000107 NCBI chr17:50,184,101...50,201,631
Ensembl chr17:50,184,101...50,201,632
JBrowse link
G COL1A2 collagen type I alpha 2 chain part_of TAS
IPI
IBA
IEA
IDA
IMP
(PMID:6267597)
(PMID:26848503)
(PMID:18375391), (PMID:19932771)
(PMID:17955022)
UniProt
ComplexPortal
GO_Central
Ensembl
PMID:6267597 PMID:17955022 PMID:18375391 PMID:19932771 PMID:26848503 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:94,394,895...94,431,227
Ensembl chr 7:94,394,895...94,431,227
JBrowse link
collagen type II trimer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COL2A1 collagen type II alpha 1 chain part_of IEA
IBA
IDA
(PMID:8660302) Ensembl
GO_Central
BHF-UCL
PMID:8660302 GO_REF:0000033 GO_REF:0000107 NCBI chr12:47,972,967...48,006,212
Ensembl chr12:47,972,967...48,004,554
JBrowse link
collagen type III trimer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COL3A1 collagen type III alpha 1 chain part_of IEA
IPI
NAS
IDA
IMP
(PMID:18805790)
(PMID:1672129)
(PMID:19932771)
(PMID:17576241), (PMID:7487954)
Ensembl
ComplexPortal
UniProt
CAFA
PMID:1672129 PMID:7487954 PMID:17576241 PMID:18805790 PMID:19932771 GO_REF:0000107 NCBI chr 2:188,974,373...189,012,746
Ensembl chr 2:188,974,373...189,012,746
JBrowse link
collagen type IV trimer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COL4A1 collagen type IV alpha 1 chain part_of IMP
IEA
(PMID:16107487) BHF-UCL
Ensembl
PMID:16107487 GO_REF:0000107 NCBI chr13:110,148,963...110,307,157
Ensembl chr13:110,148,963...110,307,202
JBrowse link
G COL4A2 collagen type IV alpha 2 chain part_of IEA
IBA
TAS
(PMID:2846280), (PMID:3345760) Ensembl
GO_Central
UniProt
PMID:2846280 PMID:3345760 GO_REF:0000033 GO_REF:0000107 NCBI chr13:110,307,284...110,513,209
Ensembl chr13:110,305,812...110,513,209
JBrowse link
G COL4A3 collagen type IV alpha 3 chain part_of IDA
IEA
(PMID:10766752) UniProt
Ensembl
PMID:10766752 GO_REF:0000107 NCBI chr 2:227,164,624...227,314,792
Ensembl chr 2:227,164,624...227,314,792
JBrowse link
G COL4A4 collagen type IV alpha 4 chain part_of IDA
IBA
IEA
(PMID:7523402) UniProt
GO_Central
Ensembl
PMID:7523402 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:226,967,360...227,164,488
Ensembl chr 2:227,002,714...227,164,453
JBrowse link
G COL4A5 collagen type IV alpha 5 chain part_of IEA
TAS
(PMID:2349482) Ensembl
PINC
PMID:2349482 GO_REF:0000107 NCBI chr  X:108,439,838...108,697,545
Ensembl chr  X:108,439,838...108,697,545
JBrowse link
G COL4A6 collagen type IV alpha 6 chain part_of NAS
IBA
IEA
(PMID:8125972) UniProt
GO_Central
Ensembl
PMID:8125972 GO_REF:0000033 GO_REF:0000107 NCBI chr  X:108,155,614...108,439,458
Ensembl chr  X:108,155,607...108,439,497
JBrowse link
collagen type V trimer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COL5A1 collagen type V alpha 1 chain part_of IMP
IBA
NAS
TAS
(PMID:9683580)
(PMID:37158802)
(PMID:9042913)
UniProt
GO_Central
ComplexPortal
PINC
PMID:9042913 PMID:9683580 PMID:37158802 GO_REF:0000033 NCBI chr 9:134,641,803...134,844,843
Ensembl chr 9:134,641,803...134,844,843
JBrowse link
G COL5A2 collagen type V alpha 2 chain part_of IMP
NAS
IBA
(PMID:9425231), (PMID:9783710)
(PMID:37158802)
UniProt
ComplexPortal
GO_Central
PMID:9425231 PMID:9783710 PMID:37158802 GO_REF:0000033 NCBI chr 2:189,031,898...189,441,111
Ensembl chr 2:189,031,898...189,225,312
JBrowse link
G COL5A3 collagen type V alpha 3 chain part_of IEA
NAS
(PMID:10722718), (PMID:1571108), (PMID:37158802) Ensembl
UniProt
PMID:1571108 PMID:10722718 PMID:37158802 GO_REF:0000107 NCBI chr19:9,959,561...10,010,504
Ensembl chr19:9,959,561...10,010,504
JBrowse link
collagen type VII trimer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COL7A1 collagen type VII alpha 1 chain part_of TAS (PMID:9375848) PINC PMID:9375848 NCBI chr 3:48,564,073...48,595,329
Ensembl chr 3:48,564,073...48,595,329
JBrowse link
collagen type VIII trimer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COL8A1 collagen type VIII alpha 1 chain part_of TAS (PMID:2029894), (PMID:9438378) PINC PMID:2029894 PMID:9438378 NCBI chr 3:99,638,594...99,799,217
Ensembl chr 3:99,638,475...99,799,226
JBrowse link
G COL8A2 collagen type VIII alpha 2 chain part_of TAS (PMID:9438378) GO_Central PMID:9438378 NCBI chr 1:36,095,239...36,125,222
Ensembl chr 1:36,095,239...36,125,222
JBrowse link
collagen type X trimer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COL10A1 collagen type X alpha 1 chain part_of IPI (PMID:11839302) ComplexPortal PMID:11839302 NCBI chr 6:116,118,909...116,217,144
Ensembl chr 6:116,118,909...116,158,747
JBrowse link
collagen type XI trimer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COL11A1 collagen type XI alpha 1 chain part_of IDA
NAS
IBA
(PMID:3182841)
(PMID:10486316), (PMID:17876790)
UniProt
ComplexPortal
GO_Central
PMID:3182841 PMID:10486316 PMID:17876790 GO_REF:0000033 NCBI chr 1:102,876,473...103,108,522
Ensembl chr 1:102,876,467...103,108,872
JBrowse link
G COL11A2 collagen type XI alpha 2 chain part_of NAS (PMID:17876790), (PMID:7859284), (PMID:8838804) ComplexPortal PMID:7859284 PMID:8838804 PMID:17876790 NCBI chr 6:33,162,694...33,193,519
Ensembl chr 6:33,162,681...33,192,499
JBrowse link
G COL28A1 collagen type XXVIII alpha 1 chain part_of IBA GO_Central GO_REF:0000033 NCBI chr 7:7,338,194...7,543,870
Ensembl chr 7:7,356,203...7,535,873
JBrowse link
G COL2A1 collagen type II alpha 1 chain part_of NAS (PMID:17876790) ComplexPortal PMID:17876790 NCBI chr12:47,972,967...48,006,212
Ensembl chr12:47,972,967...48,004,554
JBrowse link
G COL5A1 collagen type V alpha 1 chain part_of TAS (PMID:20705069) GO_Central PMID:20705069 NCBI chr 9:134,641,803...134,844,843
Ensembl chr 9:134,641,803...134,844,843
JBrowse link
G COL5A2 collagen type V alpha 2 chain part_of NAS (PMID:17876790) ComplexPortal PMID:17876790 NCBI chr 2:189,031,898...189,441,111
Ensembl chr 2:189,031,898...189,225,312
JBrowse link
collagen type XV trimer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COL15A1 collagen type XV alpha 1 chain part_of TAS (PMID:9651385) UniProt PMID:9651385 NCBI chr 9:98,943,907...99,070,787
Ensembl chr 9:98,943,179...99,070,787
JBrowse link
collagen type XXVI trimer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COL26A1 collagen type XXVI alpha 1 chain part_of NAS (PMID:1916105) ComplexPortal PMID:1916105 NCBI chr 7:101,362,388...101,559,024
Ensembl chr 7:101,362,875...101,559,024
JBrowse link
cone matrix sheath term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RBP3 retinol binding protein 3 is_active_in
located_in
IBA
ISO
(PMID:21935947) GO_Central
AgBase
PMID:21935947 GO_REF:0000033 NCBI chr10:47,348,363...47,357,881
Ensembl chr10:47,348,363...47,357,881
JBrowse link
EMILIN complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EMILIN1 elastin microfibril interfacer 1 part_of IMP
IPI
(PMID:18463100)
(PMID:10821830)
CAFA
ComplexPortal
PMID:10821830 PMID:18463100 NCBI chr 2:27,078,615...27,086,403
Ensembl chr 2:27,078,615...27,086,403
JBrowse link
G EMILIN2 elastin microfibril interfacer 2 part_of ISS ComplexPortal GO_REF:0000114 NCBI chr18:2,846,232...2,916,003
Ensembl chr18:2,847,006...2,916,003
JBrowse link
extracellular matrix of synaptic cleft term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LAMA5 laminin subunit alpha 5 is_active_in IEA Ensembl GO_REF:0000107 NCBI chr20:62,309,065...62,367,312
Ensembl chr20:62,307,955...62,367,312
JBrowse link
G MMP9 matrix metallopeptidase 9 is_active_in ISO PMID:18332222 SynGO PMID:18332222 RGD:405650358 NCBI chr20:46,008,908...46,016,561
Ensembl chr20:46,008,908...46,016,561
JBrowse link
G SPARCL1 SPARC like 1 is_active_in ISO PMID:17151913 SynGO PMID:17151913 RGD:13702411 NCBI chr 4:87,473,335...87,529,376
Ensembl chr 4:87,473,335...87,531,061
JBrowse link
G TNC tenascin C is_active_in IEA Ensembl GO_REF:0000107 NCBI chr 9:115,019,575...115,118,157
Ensembl chr 9:115,019,575...115,118,207
JBrowse link
fibrillar collagen trimer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COL27A1 collagen type XXVII alpha 1 chain part_of IEA Ensembl GO_REF:0000107 NCBI chr 9:114,154,098...114,312,511
Ensembl chr 9:114,155,537...114,312,511
JBrowse link
G LUM lumican part_of IDA (PMID:10734230) UniProt PMID:10734230 NCBI chr12:91,102,629...91,111,494
Ensembl chr12:91,102,629...91,111,494
JBrowse link
interphotoreceptor matrix term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EYS eyes shut homolog located_in IEA UniProt GO_REF:0000044 NCBI chr 6:63,719,980...65,707,226
Ensembl chr 6:63,719,980...65,707,226
JBrowse link
G IMPG1 interphotoreceptor matrix proteoglycan 1 located_in IEA UniProt
Ensembl
GO_REF:0000044 GO_REF:0000107 NCBI chr 6:75,921,114...76,072,662
Ensembl chr 6:75,921,114...76,072,678
JBrowse link
G IMPG2 interphotoreceptor matrix proteoglycan 2 located_in IEA Ensembl
UniProt
GO_REF:0000044 GO_REF:0000107 NCBI chr 3:101,222,546...101,320,575
Ensembl chr 3:101,222,546...101,320,575
JBrowse link
G RBP3 retinol binding protein 3 located_in ISO
IEA
RGD
Ensembl
UniProt
PMID:8282025 GO_REF:0000044 GO_REF:0000107 RGD:6893658 NCBI chr10:47,348,363...47,357,881
Ensembl chr10:47,348,363...47,357,881
JBrowse link
G RTBDN retbindin located_in IEA UniProt
Ensembl
GO_REF:0000044 GO_REF:0000107 NCBI chr19:12,825,482...12,835,428
Ensembl chr19:12,825,478...12,835,428
JBrowse link
G VCAN versican located_in IEA UniProt GO_REF:0000044 NCBI chr 5:83,471,744...83,582,302
Ensembl chr 5:83,471,618...83,582,303
JBrowse link
interstitial matrix term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABI3BP ABI family member 3 binding protein located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:100,749,156...100,993,421
Ensembl chr 3:100,749,156...100,993,515
JBrowse link
G ADAMTSL4 ADAMTS like 4 located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:150,549,408...150,560,937
Ensembl chr 1:150,549,369...150,560,937
JBrowse link
G C6orf15 chromosome 6 open reading frame 15 located_in ISO (PMID:18757743) MGI PMID:18757743 NCBI chr 6:31,111,223...31,112,575
Ensembl chr 6:31,111,223...31,112,575
JBrowse link
G CCDC80 coiled-coil domain containing 80 located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:112,596,797...112,641,143
Ensembl chr 3:112,596,797...112,649,530
JBrowse link
G COL14A1 collagen type XIV alpha 1 chain located_in
is_active_in
IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr 8:120,124,454...120,373,573
Ensembl chr 8:120,059,780...120,373,573
JBrowse link
G ECM2 extracellular matrix protein 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:92,493,547...92,559,106
Ensembl chr 9:92,493,554...92,536,655
JBrowse link
G EGFLAM EGF like, fibronectin type III and laminin G domains located_in IEA Ensembl GO_REF:0000107 NCBI chr 5:38,258,559...38,465,480
Ensembl chr 5:38,258,409...38,465,480
JBrowse link
G IGF1 insulin like growth factor 1 ISO RGD PMID:15544842 RGD:1580475 NCBI chr12:102,395,874...102,481,839
Ensembl chr12:102,395,874...102,481,744
JBrowse link
G KAZALD1 Kazal type serine peptidase inhibitor domain 1 located_in
is_active_in
IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr10:101,061,989...101,068,131
Ensembl chr10:101,061,989...101,068,131
JBrowse link
G MAMDC2 MAM domain containing 2 located_in ISO (PMID:18757743) MGI PMID:18757743 NCBI chr 9:70,043,581...70,226,972
Ensembl chr 9:70,043,848...70,226,972
JBrowse link
G NAV2 neuron navigator 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr11:19,345,236...20,121,601
Ensembl chr11:19,350,724...20,121,601
JBrowse link
G NEPNP nephrocan, pseudogene located_in ISO (PMID:18757743) MGI PMID:18757743 NCBI chr 6:117,602,928...117,645,087
Ensembl chr 6:117,633,706...117,645,087
JBrowse link
G SMOC2 SPARC related modular calcium binding 2 located_in ISO (PMID:18757743) MGI PMID:18757743 NCBI chr 6:168,441,184...168,667,992
Ensembl chr 6:168,441,151...168,673,445
JBrowse link
G TNC tenascin C located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:115,019,575...115,118,157
Ensembl chr 9:115,019,575...115,118,207
JBrowse link
G VIT vitrin located_in
is_active_in
IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr 2:36,696,707...36,814,794
Ensembl chr 2:36,696,690...36,814,794
JBrowse link
G VWA1 von Willebrand factor A domain containing 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:1,435,690...1,442,882
Ensembl chr 1:1,434,861...1,442,882
JBrowse link
G VWC2 von Willebrand factor C domain containing 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr 7:49,773,638...49,922,205
Ensembl chr 7:49,773,638...49,921,950
JBrowse link
laminin complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LAMA1 laminin subunit alpha 1 part_of IEA Ensembl GO_REF:0000107 NCBI chr18:6,941,742...7,117,797
Ensembl chr18:6,941,742...7,117,797
JBrowse link
G LAMB1 laminin subunit beta 1 part_of IEA Ensembl GO_REF:0000107 NCBI chr 7:107,923,799...108,003,161
Ensembl chr 7:107,923,799...108,003,213
JBrowse link
G LAMB2 laminin subunit beta 2 part_of IEA Ensembl GO_REF:0000107 NCBI chr 3:49,121,114...49,133,050
Ensembl chr 3:49,121,114...49,133,118
JBrowse link
G NTN4 netrin 4 part_of IBA GO_Central GO_REF:0000033 NCBI chr12:95,657,807...95,791,155
Ensembl chr12:95,657,807...95,791,189
JBrowse link
G PMP22 peripheral myelin protein 22 part_of ISO (PMID:16436605) MGI PMID:16436605 NCBI chr17:15,229,779...15,265,326
Ensembl chr17:15,229,773...15,272,292
JBrowse link
laminin-1 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LAMA1 laminin subunit alpha 1 part_of IPI
IDA
IEA
(PMID:10964500)
(PMID:8601594)
UniProt
Ensembl
PMID:8601594 PMID:10964500 GO_REF:0000107 NCBI chr18:6,941,742...7,117,797
Ensembl chr18:6,941,742...7,117,797
JBrowse link
G LAMB1 laminin subunit beta 1 part_of TAS
IEA
IDA
IPI
(PMID:14557481)
(PMID:16289578)
(PMID:10964500)
HGNC-UCL
Ensembl
UniProt
PMID:10964500 PMID:14557481 PMID:16289578 GO_REF:0000107 NCBI chr 7:107,923,799...108,003,161
Ensembl chr 7:107,923,799...108,003,213
JBrowse link
G LAMC1 laminin subunit gamma 1 part_of ISO
IEA
NAS
TAS
(PMID:10964500)
(PMID:14557481)
RGD
Ensembl
UniProt
HGNC-UCL
PMID:8648916 PMID:10964500 PMID:14557481 GO_REF:0000107 RGD:633159 NCBI chr 1:183,023,420...183,145,592
Ensembl chr 1:183,023,420...183,145,592
JBrowse link
laminin-10 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LAMA5 laminin subunit alpha 5 part_of TAS
IEA
IDA
(PMID:16236823)
(PMID:10964500)
BHF-UCL
Ensembl
UniProt
PMID:10964500 PMID:16236823 GO_REF:0000107 NCBI chr20:62,309,065...62,367,312
Ensembl chr20:62,307,955...62,367,312
JBrowse link
G LAMB1 laminin subunit beta 1 part_of IDA
IEA
(PMID:10964500), (PMID:16289578) UniProt
Ensembl
PMID:10964500 PMID:16289578 GO_REF:0000107 NCBI chr 7:107,923,799...108,003,161
Ensembl chr 7:107,923,799...108,003,213
JBrowse link
G LAMC1 laminin subunit gamma 1 part_of TAS (PMID:16236823) BHF-UCL PMID:16236823 NCBI chr 1:183,023,420...183,145,592
Ensembl chr 1:183,023,420...183,145,592
JBrowse link
laminin-11 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LAMA5 laminin subunit alpha 5 part_of TAS (PMID:16236823) BHF-UCL PMID:16236823 NCBI chr20:62,309,065...62,367,312
Ensembl chr20:62,307,955...62,367,312
JBrowse link
G LAMB2 laminin subunit beta 2 part_of TAS (PMID:16236823) BHF-UCL PMID:16236823 NCBI chr 3:49,121,114...49,133,050
Ensembl chr 3:49,121,114...49,133,118
JBrowse link
G LAMC1 laminin subunit gamma 1 part_of TAS (PMID:16236823) BHF-UCL PMID:16236823 NCBI chr 1:183,023,420...183,145,592
Ensembl chr 1:183,023,420...183,145,592
JBrowse link
laminin-2 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LAMB1 laminin subunit beta 1 part_of TAS
IDA
(PMID:15894315)
(PMID:16289578)
UniProt PMID:15894315 PMID:16289578 NCBI chr 7:107,923,799...108,003,161
Ensembl chr 7:107,923,799...108,003,213
JBrowse link
G LAMC2 laminin subunit gamma 2 part_of ISO
IEA
RGD
Ensembl
PMID:9417868 GO_REF:0000107 RGD:633095 NCBI chr 1:183,186,264...183,258,968
Ensembl chr 1:183,186,238...183,245,127
JBrowse link
laminin-3 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LAMA1 laminin subunit alpha 1 part_of IPI (PMID:10964500) UniProt PMID:10964500 NCBI chr18:6,941,742...7,117,797
Ensembl chr18:6,941,742...7,117,797
JBrowse link
G LAMA3 laminin subunit alpha 3 part_of ISO
IEA
RGD
Ensembl
PMID:8923212 GO_REF:0000107 RGD:633107 NCBI chr18:23,689,453...23,955,066
Ensembl chr18:23,689,453...23,956,222
JBrowse link
G LAMB2 laminin subunit beta 2 part_of IPI
IEA
(PMID:10964500) UniProt
Ensembl
PMID:10964500 GO_REF:0000107 NCBI chr 3:49,121,114...49,133,050
Ensembl chr 3:49,121,114...49,133,118
JBrowse link
laminin-5 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LAMA3 laminin subunit alpha 3 part_of IEA Ensembl GO_REF:0000107 NCBI chr18:23,689,453...23,955,066
Ensembl chr18:23,689,453...23,956,222
JBrowse link
G LAMA5 laminin subunit alpha 5 part_of ISO
IEA
RGD
Ensembl
PMID:9417868 GO_REF:0000107 RGD:633095 NCBI chr20:62,309,065...62,367,312
Ensembl chr20:62,307,955...62,367,312
JBrowse link
G LAMB3 laminin subunit beta 3 part_of IEA Ensembl GO_REF:0000107 NCBI chr 1:209,614,870...209,652,425
Ensembl chr 1:209,614,870...209,652,425
JBrowse link
G LAMC2 laminin subunit gamma 2 part_of ISO (PMID:9264260) MGI PMID:9264260 NCBI chr 1:183,186,264...183,258,968
Ensembl chr 1:183,186,238...183,245,127
JBrowse link
laminin-8 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LAMB1 laminin subunit beta 1 part_of IDA
TAS
(PMID:16289578)
(PMID:15894315)
UniProt PMID:15894315 PMID:16289578 NCBI chr 7:107,923,799...108,003,161
Ensembl chr 7:107,923,799...108,003,213
JBrowse link
matrilin complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MATN1 matrilin 1 part_of ISO ComplexPortal GO_REF:0000114 NCBI chr 1:30,711,277...30,723,585
Ensembl chr 1:30,711,277...30,723,585
JBrowse link
G MATN2 matrilin 2 part_of IEA
ISO
Ensembl
ComplexPortal
GO_REF:0000107 GO_REF:0000114 NCBI chr 8:97,869,064...98,036,724
Ensembl chr 8:97,868,840...98,036,724
JBrowse link
G MATN3 matrilin 3 part_of IEA
ISO
Ensembl
ComplexPortal
GO_REF:0000107 GO_REF:0000114 NCBI chr 2:19,992,052...20,012,668
Ensembl chr 2:19,992,052...20,012,668
JBrowse link
G MATN4 matrilin 4 part_of ISO ComplexPortal GO_REF:0000114 NCBI chr20:45,293,450...45,308,684
Ensembl chr20:45,293,445...45,308,529
JBrowse link
multimerin complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MMRN1 multimerin 1 part_of IPI (PMID:9454761) ComplexPortal PMID:9454761 NCBI chr 4:89,879,511...89,954,614
Ensembl chr 4:89,879,532...89,954,629
JBrowse link
G MMRN2 multimerin 2 part_of ISS ComplexPortal GO_REF:0000114 NCBI chr10:86,935,540...86,957,615
Ensembl chr10:86,935,540...86,969,481
JBrowse link
perineuronal net term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAN aggrecan is_active_in ISO
IBA
RGD
GO_Central
PMID:18364019 GO_REF:0000033 RGD:2315810 NCBI chr15:88,803,436...88,875,353
Ensembl chr15:88,803,436...88,875,353
JBrowse link
G BCAN brevican is_active_in
located_in
ISO
IBA
IEA
MMO:0000669 RGD
GO_Central
Ensembl
PMID:16644727 GO_REF:0000033 GO_REF:0000107 RGD:9589827 NCBI chr 1:156,642,117...156,659,528
Ensembl chr 1:156,641,390...156,659,532
JBrowse link
G HAPLN1 hyaluronan and proteoglycan link protein 1 is_active_in IBA GO_Central GO_REF:0000033 NCBI chr 5:83,637,805...83,720,855
Ensembl chr 5:83,637,805...83,720,855
JBrowse link
G HAPLN2 hyaluronan and proteoglycan link protein 2 is_active_in IBA GO_Central GO_REF:0000033 NCBI chr 1:156,601,504...156,625,725
Ensembl chr 1:156,619,331...156,625,725
JBrowse link
G HAPLN3 hyaluronan and proteoglycan link protein 3 is_active_in IBA GO_Central GO_REF:0000033 NCBI chr15:88,877,294...88,895,544
Ensembl chr15:88,877,294...88,895,597
JBrowse link
G HAPLN4 hyaluronan and proteoglycan link protein 4 located_in
is_active_in
ISS
IBA
IEA
UniProt
GO_Central
Ensembl
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr19:19,254,756...19,262,804
Ensembl chr19:19,254,756...19,262,804
JBrowse link
G NCAN neurocan is_active_in ISO
IBA
MMO:0000669,MMO:0000662 RGD
GO_Central
PMID:16644727 GO_REF:0000033 RGD:9589827 NCBI chr19:19,211,958...19,252,233
Ensembl chr19:19,211,958...19,252,233
JBrowse link
G PTPRZ1 protein tyrosine phosphatase receptor type Z1 located_in ISO
IEA
RGD
Ensembl
PMID:16644727 GO_REF:0000107 RGD:9589827 NCBI chr 7:121,873,161...122,062,036
Ensembl chr 7:121,873,089...122,062,036
JBrowse link
G TNR tenascin R located_in IEA
ISO
Ensembl
ComplexPortal
GO_REF:0000107 GO_REF:0000114 NCBI chr 1:175,315,194...175,743,595
Ensembl chr 1:175,315,194...175,743,595
JBrowse link
G VCAN versican is_active_in ISO
IBA
MMO:0000669,MMO:0000662 RGD
GO_Central
PMID:16644727 GO_REF:0000033 RGD:9589827 NCBI chr 5:83,471,744...83,582,302
Ensembl chr 5:83,471,618...83,582,303
JBrowse link
perisynaptic extracellular matrix term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAN aggrecan is_active_in ISO (PMID:27615741) SynGO PMID:27615741 NCBI chr15:88,803,436...88,875,353
Ensembl chr15:88,803,436...88,875,353
JBrowse link
G BCAN brevican is_active_in ISO PMID:10414531
PMID:16503162
SynGO PMID:10414531 PMID:16503162 RGD:13702202 RGD:13702210 NCBI chr 1:156,642,117...156,659,528
Ensembl chr 1:156,641,390...156,659,532
JBrowse link
G NCAN neurocan is_active_in ISO (PMID:29670169), (PMID:30356641) SynGO PMID:29670169 PMID:30356641 NCBI chr19:19,211,958...19,252,233
Ensembl chr19:19,211,958...19,252,233
JBrowse link
G SLIT2 slit guidance ligand 2 is_active_in ISO PMID:34686348 SynGO PMID:34686348 RGD:405650259 NCBI chr 4:20,251,905...20,620,561
Ensembl chr 4:20,251,905...20,620,561
JBrowse link
G TNC tenascin C is_active_in IBA
IEA
GO_Central
Ensembl
GO_REF:0000033 GO_REF:0000107 NCBI chr 9:115,019,575...115,118,157
Ensembl chr 9:115,019,575...115,118,207
JBrowse link
G TNR tenascin R is_active_in ISO PMID:11598921 SynGO PMID:11598921 RGD:13702357 NCBI chr 1:175,315,194...175,743,595
Ensembl chr 1:175,315,194...175,743,595
JBrowse link
tenascin complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TNC tenascin C part_of IEA
ISO
Ensembl
ComplexPortal
GO_REF:0000107 GO_REF:0000114 NCBI chr 9:115,019,575...115,118,157
Ensembl chr 9:115,019,575...115,118,207
JBrowse link
G TNN tenascin N part_of IEA
IPI
(PMID:17909022) Ensembl
ComplexPortal
PMID:17909022 GO_REF:0000107 NCBI chr 1:175,067,833...175,148,075
Ensembl chr 1:175,067,833...175,148,075
JBrowse link
G TNR tenascin R part_of IEA
ISO
Ensembl
ComplexPortal
GO_REF:0000107 GO_REF:0000114 NCBI chr 1:175,315,194...175,743,595
Ensembl chr 1:175,315,194...175,743,595
JBrowse link
G TNXB tenascin XB part_of ISO ComplexPortal GO_REF:0000114 NCBI chr 6:32,041,153...32,109,338
Ensembl chr 6:32,041,153...32,115,334
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 21539
    cellular anatomical structure 21187
      external encapsulating structure 592
        extracellular matrix 590
          collagen-containing extracellular matrix 453
            EMILIN complex 2
            basement membrane + 121
            collagen type XXVI trimer 1
            collagen type XXVIII trimer 0
            complex of collagen trimers + 22
            cuticular extracellular matrix + 0
            extracellular matrix of synaptic cleft 4
            hyaline layer + 0
            interphotoreceptor matrix + 6
            interstitial matrix 17
            matrilin complex 4
            multimerin complex 2
            perisynaptic extracellular matrix + 12
            synapse-associated extracellular matrix + 15
            tenascin complex 4
            transforming growth factor beta complex 0
Path 2
Term Annotations click to browse term
  cellular_component 21539
    cellular anatomical structure 21187
      cell periphery 6736
        external encapsulating structure 592
          extracellular matrix 590
            collagen-containing extracellular matrix 453
              EMILIN complex 2
              basement membrane + 121
              collagen type XXVI trimer 1
              collagen type XXVIII trimer 0
              complex of collagen trimers + 22
              cuticular extracellular matrix + 0
              extracellular matrix of synaptic cleft 4
              hyaline layer + 0
              interphotoreceptor matrix + 6
              interstitial matrix 17
              matrilin complex 4
              multimerin complex 2
              perisynaptic extracellular matrix + 12
              synapse-associated extracellular matrix + 15
              tenascin complex 4
              transforming growth factor beta complex 0
paths to the root