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ONTOLOGY REPORT - ANNOTATIONS


Term:selective autophagy
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Accession:GO:0061912 term browser browse the term
Definition:The macroautophagy process in which specific structures are targeted by the autophagy process.


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selective autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KLHL3 kelch like family member 3 involved_in TAS (PMID:26349538) ARUK-UCL PMID:26349538 NCBI chr 5:137,617,500...137,736,089
Ensembl chr 5:137,617,500...137,736,089
JBrowse link
G SQSTM1 sequestosome 1 involved_in IMP (PMID:22622177) UniProt PMID:22622177 NCBI chr 5:179,806,393...179,838,078
Ensembl chr 5:179,806,398...179,838,078
JBrowse link
aggrephagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACBD5 acyl-CoA binding domain containing 5 NOT|involved_in IMP (PMID:24535825) UniProt PMID:24535825 NCBI chr10:27,182,838...27,243,542
Ensembl chr10:27,168,135...27,243,046
JBrowse link
G ATG5 autophagy related 5 involved_in IMP (PMID:22982048) ParkinsonsUK-UCL PMID:22982048 NCBI chr 6:106,184,476...106,325,789
Ensembl chr 6:106,045,423...106,325,791
JBrowse link
G MAP1LC3C microtubule associated protein 1 light chain 3 gamma involved_in IMP (PMID:28404643) UniProt PMID:28404643 NCBI chr 1:241,995,194...242,001,393
Ensembl chr 1:241,995,490...241,999,098
JBrowse link
G SQSTM1 sequestosome 1 involved_in IBA
IPI
(PMID:21873635)
(PMID:28404643)
GO_Central
UniProt
PMID:21873635 PMID:28404643 NCBI chr 5:179,806,393...179,838,078
Ensembl chr 5:179,806,398...179,838,078
JBrowse link
G UBQLN1 ubiquilin 1 involved_in IDA (PMID:21143716) UniProt PMID:21143716 NCBI chr 9:83,659,968...83,707,979
Ensembl chr 9:83,659,968...83,707,958
JBrowse link
G WDFY3 WD repeat and FYVE domain containing 3 involved_in IMP (PMID:20168092), (PMID:20417604) UniProt PMID:20168092 PMID:20417604 NCBI chr 4:84,669,597...84,966,690
Ensembl chr 4:84,669,597...84,966,690
JBrowse link
G WDR81 WD repeat domain 81 involved_in IMP (PMID:28404643) UniProt PMID:28404643 NCBI chr17:1,716,523...1,738,585
Ensembl chr17:1,716,523...1,738,599
JBrowse link
glycophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RB1CC1 RB1 inducible coiled-coil 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 8:52,622,458...52,714,466
Ensembl chr 8:52,622,458...52,745,843
JBrowse link
G STBD1 starch binding domain 1 involved_in IMP (PMID:20810658) GO_Central PMID:20810658 NCBI chr 4:76,306,733...76,311,130
Ensembl chr 4:76,306,733...76,311,130
JBrowse link
lipophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AUP1 AUP1 lipid droplet regulating VLDL assembly factor involved_in IMP (PMID:29902443) UniProt PMID:29902443 NCBI chr 2:74,526,652...74,529,706
Ensembl chr 2:74,526,645...74,529,760
JBrowse link
G RAB7A RAB7A, member RAS oncogene family involved_in ISS GO_Central GO_REF:0000024 NCBI chr 3:128,726,183...128,814,798
Ensembl chr 3:128,693,669...128,825,942
JBrowse link
mitophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMBRA1 autophagy and beclin 1 regulator 1 involved_in IMP
IDA
(PMID:25215947)
(PMID:21753002)
ParkinsonsUK-UCL PMID:21753002 PMID:25215947 NCBI chr11:46,396,412...46,594,055
Ensembl chr11:46,396,414...46,594,125
JBrowse link
G ATG13 autophagy related 13 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:46,617,527...46,674,518
Ensembl chr11:46,617,527...46,674,818
JBrowse link
G ATG14 autophagy related 14 involved_in IMP
IBA
(PMID:23878393)
(PMID:21873635)
ParkinsonsUK-UCL
GO_Central
PMID:21873635 PMID:23878393 NCBI chr14:55,366,391...55,411,830
Ensembl chr14:55,366,391...55,411,830
JBrowse link
G BECN1 beclin 1 involved_in IMP (PMID:23878393) ParkinsonsUK-UCL PMID:23878393 NCBI chr17:42,810,132...42,824,282
Ensembl chr17:42,810,134...42,833,350
JBrowse link
G GBA glucosylceramidase beta acts_upstream_of_or_within ISO (MGI:5501380|PMID:23707074) MGI PMID:23707074 MGI:5501380 NCBI chr 1:155,234,452...155,244,627
Ensembl chr 1:155,234,452...155,244,699
JBrowse link
G MAP1LC3B microtubule associated protein 1 light chain 3 beta involved_in IDA (PMID:28017329) UniProt PMID:28017329 NCBI chr16:87,392,336...87,404,774
Ensembl chr16:87,383,953...87,404,779
JBrowse link
G PHB2 prohibitin 2 involved_in IDA (PMID:28017329) UniProt PMID:28017329 NCBI chr12:6,965,327...6,970,753
Ensembl chr12:6,965,327...6,970,780
JBrowse link
G PRKN parkin RBR E3 ubiquitin protein ligase involved_in
acts_upstream_of_or_within
IDA
ISO
(PMID:28017329)
(MGI:5603233|PMID:24949970)
UniProt
MGI
PMID:24949970 PMID:28017329 MGI:5603233 NCBI chr 6:161,347,417...162,727,802
Ensembl chr 6:161,347,417...162,727,775
JBrowse link
G RETREG1 reticulophagy regulator 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:6370289|PMID:31446166) MGI
Ensembl
PMID:31446166 GO_REF:0000107 MGI:6370289 NCBI chr 5:16,473,038...16,617,096
Ensembl chr 5:16,473,038...16,617,101
JBrowse link
G SQSTM1 sequestosome 1 involved_in IGI
IBA
(PMID:20457763)
(PMID:21873635)
ParkinsonsUK-UCL
GO_Central
PMID:20457763 PMID:21873635 NCBI chr 5:179,806,393...179,838,078
Ensembl chr 5:179,806,398...179,838,078
JBrowse link
G TAFAZZIN tafazzin, phospholipid-lysophospholipid transacylase involved_in IMP
ISS
(PMID:33096711) UniProt PMID:33096711 GO_REF:0000024 NCBI chr  X:154,411,539...154,421,726
Ensembl chr  X:154,411,524...154,421,726
JBrowse link
G ULK1 unc-51 like autophagy activating kinase 1 involved_in ISO (MGI:5607224|PMID:21855797) ParkinsonsUK-UCL PMID:21855797 MGI:5607224 NCBI chr12:131,894,622...131,923,150
Ensembl chr12:131,894,622...131,923,150
JBrowse link
negative regulation of mitophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLEC16A C-type lectin domain containing 16A acts_upstream_of_or_within ISO (MGI:5603233|PMID:24949970) MGI PMID:24949970 MGI:5603233 NCBI chr16:10,944,539...11,193,272
Ensembl chr16:10,944,564...11,182,186
JBrowse link
G RNF41 ring finger protein 41 acts_upstream_of_or_within ISO (MGI:5603233|PMID:24949970) MGI PMID:24949970 MGI:5603233 NCBI chr12:56,202,179...56,221,982
Ensembl chr12:56,202,179...56,221,933
JBrowse link
G TIGAR TP53 induced glycolysis regulatory phosphatase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5319065|PMID:22044588) Ensembl
MGI
PMID:22044588 GO_REF:0000107 MGI:5319065 NCBI chr12:4,321,213...4,360,028
Ensembl chr12:4,307,763...4,360,028
JBrowse link
G TP53 tumor protein p53 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5319065|PMID:22044588) Ensembl
MGI
PMID:22044588 GO_REF:0000107 MGI:5319065 NCBI chr17:7,668,421...7,687,490
Ensembl chr17:7,661,779...7,687,538
JBrowse link
G TSC2 TSC complex subunit 2 involved_in NAS (PMID:26735435) ParkinsonsUK-UCL PMID:26735435 NCBI chr16:2,047,804...2,089,491
Ensembl chr16:2,047,967...2,089,491
JBrowse link
G USP30 ubiquitin specific peptidase 30 involved_in IEA
ISO
Ensembl
RGD
PMID:24896179 GO_REF:0000107 RGD:13208875 NCBI chr12:109,023,089...109,088,026
Ensembl chr12:109,023,089...109,088,023
JBrowse link
negative regulation of mitophagy in response to mitochondrial depolarization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HTRA2 HtrA serine peptidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:74,529,405...74,533,556
Ensembl chr 2:74,529,725...74,533,332
JBrowse link
negative regulation of parkin-mediated stimulation of mitophagy in response to mitochondrial depolarization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G VPS13C vacuolar protein sorting 13 homolog C involved_in IMP (PMID:26942284) ParkinsonsUK-UCL PMID:26942284 NCBI chr15:61,852,389...62,060,447
Ensembl chr15:61,852,389...62,060,473
JBrowse link
parkin-mediated stimulation of mitophagy in response to mitochondrial depolarization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HDAC6 histone deacetylase 6 involved_in IGI (PMID:20457763) ParkinsonsUK-UCL PMID:20457763 NCBI chr  X:48,801,398...48,824,982
Ensembl chr  X:48,801,377...48,824,982
JBrowse link
G MFN2 mitofusin 2 involved_in ISS ParkinsonsUK-UCL GO_REF:0000024 NCBI chr 1:11,980,215...12,013,508
Ensembl chr 1:11,980,181...12,015,211
JBrowse link
G OPTN optineurin involved_in IMP (PMID:25294927) ParkinsonsUK-UCL PMID:25294927 NCBI chr10:13,100,082...13,138,308
Ensembl chr10:13,099,449...13,138,308
JBrowse link
G PRKN parkin RBR E3 ubiquitin protein ligase involved_in IDA (PMID:19029340) ParkinsonsUK-UCL PMID:19029340 NCBI chr 6:161,347,417...162,727,802
Ensembl chr 6:161,347,417...162,727,775
JBrowse link
G SMURF1 SMAD specific E3 ubiquitin protein ligase 1 involved_in ISO (MGI:5298125|PMID:22020285) ParkinsonsUK-UCL PMID:22020285 MGI:5298125 NCBI chr 7:99,027,435...99,144,118
Ensembl chr 7:99,027,440...99,144,108
JBrowse link
pexophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PJVK pejvakin involved_in ISS UniProt GO_REF:0000024 NCBI chr 2:178,450,592...178,467,549
Ensembl chr 2:178,451,346...178,462,102
JBrowse link
G USP30 ubiquitin specific peptidase 30 involved_in TAS Reactome Reactome:R-HSA-9664873 NCBI chr12:109,023,089...109,088,026
Ensembl chr12:109,023,089...109,088,023
JBrowse link
positive regulation of aggrephagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BAG3 BAG cochaperone 3 involved_in IMP (PMID:18006506) ARUK-UCL PMID:18006506 NCBI chr10:119,651,380...119,677,819
Ensembl chr10:119,651,380...119,677,819
JBrowse link
G HSPB8 heat shock protein family B (small) member 8 involved_in IMP (PMID:18006506) ARUK-UCL PMID:18006506 NCBI chr12:119,178,931...119,194,746
Ensembl chr12:119,171,555...119,224,855
JBrowse link
G HTT huntingtin involved_in IMP (PMID:25686248) ParkinsonsUK-UCL PMID:25686248 NCBI chr 4:3,074,681...3,243,960
Ensembl chr 4:3,041,363...3,243,957
JBrowse link
positive regulation of lipophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADRB2 adrenoceptor beta 2 involved_in IDA (PMID:23708524) GO_Central PMID:23708524 NCBI chr 5:148,826,611...148,828,623
Ensembl chr 5:148,826,611...148,828,623
JBrowse link
G HTT huntingtin involved_in IMP (PMID:25686248) ParkinsonsUK-UCL PMID:25686248 NCBI chr 4:3,074,681...3,243,960
Ensembl chr 4:3,041,363...3,243,957
JBrowse link
G SESN2 sestrin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5444071|PMID:22958918) Ensembl
MGI
PMID:22958918 GO_REF:0000107 MGI:5444071 NCBI chr 1:28,259,452...28,282,491
Ensembl chr 1:28,259,518...28,282,491
JBrowse link
G SPTLC1 serine palmitoyltransferase long chain base subunit 1 acts_upstream_of_or_within IDA (PMID:25332431) MGI PMID:25332431 NCBI chr 9:92,031,141...92,115,413
Ensembl chr 9:92,000,087...92,115,413
JBrowse link
G SPTLC2 serine palmitoyltransferase long chain base subunit 2 acts_upstream_of_or_within IDA (PMID:25332431) MGI PMID:25332431 NCBI chr14:77,505,997...77,616,663
Ensembl chr14:77,505,997...77,616,637
JBrowse link
positive regulation of mitophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CERS1 ceramide synthase 1 involved_in IDA (PMID:22922758) UniProt PMID:22922758 NCBI chr19:18,868,545...18,896,982
Ensembl chr19:18,868,545...18,896,727
JBrowse link
G PRKN parkin RBR E3 ubiquitin protein ligase ISO RGD PMID:28608965 RGD:13432560 NCBI chr 6:161,347,417...162,727,802
Ensembl chr 6:161,347,417...162,727,775
JBrowse link
G SLC25A4 solute carrier family 25 member 4 involved_in ISS UniProt GO_REF:0000024 NCBI chr 4:185,143,266...185,150,382
Ensembl chr 4:185,143,266...185,150,382
JBrowse link
G SLC25A5 solute carrier family 25 member 5 involved_in ISS UniProt GO_REF:0000024 NCBI chr  X:119,468,444...119,471,396
Ensembl chr  X:119,468,422...119,471,396
JBrowse link
G VDAC1 voltage dependent anion channel 1 involved_in IMP (PMID:32047033) UniProt PMID:32047033 NCBI chr 5:133,971,871...134,070,987
Ensembl chr 5:133,971,871...134,004,975
JBrowse link
G VPS13D vacuolar protein sorting 13 homolog D involved_in IMP (PMID:29307555) UniProt PMID:29307555 NCBI chr 1:12,230,030...12,512,047
Ensembl chr 1:12,230,030...12,512,047
JBrowse link
positive regulation of mitophagy in response to mitochondrial depolarization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDC37 cell division cycle 37, HSP90 cochaperone involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:10,391,128...10,403,568
Ensembl chr19:10,391,133...10,420,121
JBrowse link
G HDAC6 histone deacetylase 6 involved_in ISO (MGI:5616310|PMID:20457763) ParkinsonsUK-UCL PMID:20457763 MGI:5616310 NCBI chr  X:48,801,398...48,824,982
Ensembl chr  X:48,801,377...48,824,982
JBrowse link
G HUWE1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 involved_in IDA (PMID:30217973) CACAO PMID:30217973 NCBI chr  X:53,532,096...53,686,723
Ensembl chr  X:53,532,096...53,686,728
JBrowse link
G PINK1 PTEN induced kinase 1 involved_in IMP (PMID:20871098) ParkinsonsUK-UCL PMID:20871098 NCBI chr 1:20,633,458...20,651,511
Ensembl chr 1:20,633,458...20,651,511
JBrowse link
G PRKN parkin RBR E3 ubiquitin protein ligase involved_in IMP
IDA
(PMID:20871098), (PMID:23212910)
(PMID:20457763)
ParkinsonsUK-UCL PMID:20457763 PMID:20871098 PMID:23212910 NCBI chr 6:161,347,417...162,727,802
Ensembl chr 6:161,347,417...162,727,775
JBrowse link
G TOMM7 translocase of outer mitochondrial membrane 7 involved_in IMP (PMID:24270810) ParkinsonsUK-UCL PMID:24270810 NCBI chr 7:22,812,974...22,822,849
Ensembl chr 7:22,812,628...22,822,852
JBrowse link
positive regulation of xenophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRSAM1 leucine rich repeat and sterile alpha motif containing 1 involved_in IMP (PMID:23245322) GO_Central PMID:23245322 NCBI chr 9:127,451,486...127,503,501
Ensembl chr 9:127,451,489...127,503,499
JBrowse link
G MAPK3 mitogen-activated protein kinase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5299952|PMID:22033934) Ensembl
MGI
PMID:22033934 GO_REF:0000107 MGI:5299952 NCBI chr16:30,114,105...30,123,309
Ensembl chr16:30,114,105...30,123,506
JBrowse link
G NOD1 nucleotide binding oligomerization domain containing 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5299952|PMID:22033934) Ensembl
MGI
PMID:22033934 GO_REF:0000107 MGI:5299952 NCBI chr 7:30,424,527...30,478,840
Ensembl chr 7:30,424,527...30,478,784
JBrowse link
G NOD2 nucleotide binding oligomerization domain containing 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5299952|PMID:22033934) Ensembl
MGI
PMID:22033934 GO_REF:0000107 MGI:5299952 NCBI chr16:50,693,587...50,733,077
Ensembl chr16:50,693,588...50,734,041
JBrowse link
G OPTN optineurin involved_in IMP (PMID:21617041) ParkinsonsUK-UCL PMID:21617041 NCBI chr10:13,100,082...13,138,308
Ensembl chr10:13,099,449...13,138,308
JBrowse link
G RIPK2 receptor interacting serine/threonine kinase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5299952|PMID:22033934) Ensembl
MGI
PMID:22033934 GO_REF:0000107 MGI:5299952 NCBI chr 8:89,757,816...89,791,064
Ensembl chr 8:89,757,806...89,791,064
JBrowse link
G TBK1 TANK binding kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:64,452,105...64,502,114
Ensembl chr12:64,452,090...64,502,114
JBrowse link
G TLR2 toll like receptor 2 acts_upstream_of_or_within ISO (MGI:5299952|PMID:22033934) MGI PMID:22033934 MGI:5299952 NCBI chr 4:153,684,080...153,710,643
Ensembl chr 4:153,684,070...153,706,260
JBrowse link
reticulophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATG2A autophagy related 2A involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:64,894,546...64,917,241
Ensembl chr11:64,894,546...64,917,211
JBrowse link
G ATG2B autophagy related 2B involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:96,279,195...96,363,341
Ensembl chr14:96,279,195...96,363,341
JBrowse link
G DDRGK1 DDRGK domain containing 1 involved_in IDA (PMID:32160526) UniProt PMID:32160526 NCBI chr20:3,190,350...3,204,682
Ensembl chr20:3,190,350...3,204,685
JBrowse link
G RB1CC1 RB1 inducible coiled-coil 1 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:6323456|PMID:31006538)
GO_Central
MGI
PMID:21873635 PMID:31006538 MGI:6323456 NCBI chr 8:52,622,458...52,714,466
Ensembl chr 8:52,622,458...52,745,843
JBrowse link
G RETREG1 reticulophagy regulator 1 involved_in IEA
IBA
IMP
(PMID:21873635)
(PMID:26040720)
InterPro
GO_Central
PMID:21873635 PMID:26040720 GO_REF:0000002 NCBI chr 5:16,473,038...16,617,096
Ensembl chr 5:16,473,038...16,617,101
JBrowse link
G RETREG3 reticulophagy regulator family member 3 involved_in IEA InterPro GO_REF:0000002 NCBI chr17:42,579,508...42,609,427
Ensembl chr17:42,579,513...42,610,623
JBrowse link
G STING1 stimulator of interferon response cGAMP interactor 1 involved_in ISS
IBA
(PMID:21873635) UniProt
GO_Central
PMID:21873635 GO_REF:0000024 NCBI chr 5:139,475,533...139,482,758
Ensembl chr 5:139,475,533...139,482,935
JBrowse link
G TEX264 testis expressed 264, ER-phagy receptor involved_in
acts_upstream_of_or_within
IMP
IBA
IDA
(PMID:31006537), (PMID:31006538)
(PMID:21873635)
(PMID:31006538)
GO_Central
MGI
PMID:21873635 PMID:31006537 PMID:31006538 NCBI chr 3:51,671,252...51,704,323
Ensembl chr 3:51,662,693...51,704,323
JBrowse link
G UBA5 ubiquitin like modifier activating enzyme 5 involved_in IMP (PMID:32160526) UniProt PMID:32160526 NCBI chr 3:132,654,430...132,679,794
Ensembl chr 3:132,654,446...132,679,794
JBrowse link
G UFC1 ubiquitin-fold modifier conjugating enzyme 1 involved_in IMP (PMID:32160526) UniProt PMID:32160526 NCBI chr 1:161,132,703...161,158,856
Ensembl chr 1:161,152,776...161,158,856
JBrowse link
G UFL1 UFM1 specific ligase 1 involved_in IDA (PMID:32160526) UniProt PMID:32160526 NCBI chr 6:96,521,806...96,555,276
Ensembl chr 6:96,521,595...96,555,276
JBrowse link
G UFM1 ubiquitin fold modifier 1 involved_in IMP (PMID:32160526) UniProt PMID:32160526 NCBI chr13:38,349,851...38,363,619
Ensembl chr13:38,349,849...38,363,619
JBrowse link
G ULK1 unc-51 like autophagy activating kinase 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:131,894,622...131,923,150
Ensembl chr12:131,894,622...131,923,150
JBrowse link
G ULK2 unc-51 like autophagy activating kinase 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:19,770,828...19,867,936
Ensembl chr17:19,770,829...19,867,936
JBrowse link
xenophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATG16L1 autophagy related 16 like 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5605433|PMID:24954904) Ensembl
MGI
PMID:24954904 GO_REF:0000107 MGI:5605433 NCBI chr 2:233,251,647...233,295,674
Ensembl chr 2:233,210,051...233,295,674
JBrowse link
G CALCOCO2 calcium binding and coiled-coil domain 2 involved_in IBA
IMP
(PMID:21873635)
(PMID:25771791)
GO_Central PMID:21873635 PMID:25771791 NCBI chr17:48,831,035...48,865,245
Ensembl chr17:48,831,018...48,866,522
JBrowse link
G LGALS8 galectin 8 involved_in IMP (PMID:22246324), (PMID:28077878) GO_Central PMID:22246324 PMID:28077878 NCBI chr 1:236,518,214...236,552,981
Ensembl chr 1:236,518,000...236,552,981
JBrowse link
G WIPI2 WD repeat domain, phosphoinositide interacting 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5605433|PMID:24954904) Ensembl
MGI
PMID:24954904 GO_REF:0000107 MGI:5605433 NCBI chr 7:5,190,233...5,233,855
Ensembl chr 7:5,190,196...5,233,840
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18532
    cellular process 17456
      process utilizing autophagic mechanism 555
        autophagy 555
          macroautophagy 307
            selective autophagy 74
              aggrephagy + 10
              glycophagy 2
              lipophagy + 7
              lysophagy 0
              mitophagy + 33
              pexophagy 2
              reticulophagy + 14
              ribophagy 0
              xenophagy + 12
Path 2
Term Annotations click to browse term
  biological_process 18532
    metabolic process 11860
      catabolic process 2681
        cellular catabolic process 2316
          autophagy 555
            macroautophagy 307
              selective autophagy 74
                aggrephagy + 10
                glycophagy 2
                lipophagy + 7
                lysophagy 0
                mitophagy + 33
                pexophagy 2
                reticulophagy + 14
                ribophagy 0
                xenophagy + 12
paths to the root