Send us a Message



 Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Projects (beta) QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap)  (beta) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer) Overgo Probe Designer
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:microtubule organizing center localization
go back to main search page
Accession:GO:0061842 term browser browse the term
Definition:Any process in which the microtubule organizing center is transported to, and/or maintained in, a specific location within the cell.
Synonyms:exact_synonym: MTOC localization
 narrow_synonym: MTOC polarity;   microtubule organizing center polarity


show annotations for term's descendants           Sort by:
microtubule organizing center localization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arpc5 actin related protein 2/3 complex, subunit 5 IMP RGD PMID:21281821 RGD:11049483 NCBI chr13:64,904,504...64,913,413
Ensembl chr13:64,887,136...64,913,410 		JBrowse link
centrosome localization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aurka aurora kinase A acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5488573|PMID:22832491)
GO_REF:0000107		 RGD
Ensembl		 PMID:22832491 GO_REF:0000107 MGI:5488573 NCBI chr 3:161,128,309...161,144,524
Ensembl chr 3:161,128,313...161,144,390 		JBrowse link
G Bicd2 BICD cargo adaptor 2 involved_in ISO (PMID:20386726) RGD PMID:20386726 NCBI chr17:15,259,773...15,304,889
Ensembl chr17:15,259,773...15,304,889 		JBrowse link
G Ccdc141 coiled-coil domain containing 141 acts_upstream_of_or_within ISO (MGI:4868565|PMID:20956536) RGD PMID:20956536 MGI:4868565 NCBI chr 3:61,948,614...62,109,968
Ensembl chr 3:61,948,646...62,110,079 		JBrowse link
G Dlgap5 DLG associated protein 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:20,633,964...20,664,569
Ensembl chr15:20,633,966...20,664,518 		JBrowse link
G Dync1li2 dynein, cytoplasmic 1 light intermediate chain 2 acts_upstream_of_or_within ISO (MGI:4359132|PMID:19540120) RGD PMID:19540120 MGI:4359132 NCBI chr19:531,783...554,670
Ensembl chr19:531,812...554,670 		JBrowse link
G Ift20 intraflagellar transport 20 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:3817268 (MGI:3815342|PMID:18981227), (MGI:5311823|PMID:22282595)		 RGD PMID:18981227 PMID:22282595 PMID:21873635 MGI:3815342 MGI:5311823, RGD:13792537 NCBI chr10:63,432,597...63,438,125
Ensembl chr10:63,432,633...63,438,124 		JBrowse link
G Ints13 integrator complex subunit 13 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
(PMID:23097494)		 RGD PMID:23097494 PMID:21873635 RGD:13792537 NCBI chr 4:179,459,740...179,491,541
Ensembl chr 4:179,459,740...179,491,541 		JBrowse link
G Kif5b kinesin family member 5B involved_in ISS
ISO		 GO_REF:0000024
(PMID:20386726)		 UniProt
RGD		 PMID:20386726 GO_REF:0000024 NCBI chr17:51,489,904...51,527,508
Ensembl chr17:51,489,944...51,527,508 		JBrowse link
G Nde1 nudE neurodevelopment protein 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:839,788...883,946
Ensembl chr10:839,788...883,869 		JBrowse link
G Ndel1 nudE neurodevelopment protein 1-like 1 involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 PMID:21873635
GO_REF:0000107
(MGI:3778569|PMID:18331715)		 Ensembl
RGD		 PMID:18331715 PMID:21873635 GO_REF:0000107 MGI:3778569, RGD:13792537 NCBI chr10:53,505,628...53,582,025
Ensembl chr10:53,516,491...53,570,907 		JBrowse link
G Nin ninein involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
(MGI:4367149|PMID:19829375)		 RGD PMID:19829375 PMID:21873635 MGI:4367149, RGD:13792537 NCBI chr 6:88,525,405...88,627,710
Ensembl chr 6:88,525,742...88,627,639 		JBrowse link
G Nubp1 NUBP iron-sulfur cluster assembly factor 1 acts_upstream_of_or_within ISO (MGI:5463135|PMID:23028652) RGD PMID:23028652 MGI:5463135 NCBI chr10:5,259,328...5,270,848 JBrowse link
G Pard3 par-3 family cell polarity regulator acts_upstream_of_or_within ISO (MGI:4359132|PMID:19540120) RGD PMID:19540120 MGI:4359132 NCBI chr19:55,080,282...55,630,111
Ensembl chr19:55,080,282...55,629,778 		JBrowse link
G Plxna2 plexin A2 acts_upstream_of_or_within ISO MGI:3793763 (MGI:3793563|PMID:18327254) RGD PMID:18327254 MGI:3793563 NCBI chr13:106,163,103...106,358,979
Ensembl chr13:106,163,103...106,358,979 		JBrowse link
G Ranbp2 RAN binding protein 2 involved_in ISO (PMID:20386726) RGD PMID:20386726 NCBI chr20:26,442,156...26,493,481
Ensembl chr20:26,442,217...26,493,481 		JBrowse link
G Sema6a semaphorin 6A acts_upstream_of_or_within ISO MGI:2156202 (MGI:3793563|PMID:18327254) RGD PMID:18327254 MGI:3793563 NCBI chr18:40,050,623...40,171,954
Ensembl chr18:40,050,624...40,171,954 		JBrowse link
G Sun1 Sad1 and UNC84 domain containing 1 involved_in ISO (MGI:4412315|PMID:19874786) RGD PMID:19874786 MGI:4412315 NCBI chr12:15,396,378...15,441,277
Ensembl chr12:15,396,381...15,441,571 		JBrowse link
G Sun2 Sad1 and UNC84 domain containing 2 involved_in ISO (MGI:4412315|PMID:19874786), (MGI:4888085|PMID:20724637) RGD PMID:19874786 PMID:20724637 MGI:4412315 MGI:4888085 NCBI chr 7:111,275,374...111,292,565
Ensembl chr 7:111,275,380...111,292,553 		JBrowse link
G Syne1 spectrin repeat containing nuclear envelope protein 1 involved_in ISO (MGI:4361957|PMID:19596800) RGD PMID:19596800 MGI:4361957 NCBI chr 1:41,512,146...41,983,382
Ensembl chr 1:41,512,030...41,983,322 		JBrowse link
G Syne2 spectrin repeat containing nuclear envelope protein 2 involved_in ISO (PMID:20724637)
(MGI:4361957|PMID:19596800), (MGI:4412315|PMID:19874786), (MGI:4888085|PMID:20724637)		 RGD PMID:19596800 PMID:19874786 PMID:20724637 MGI:4361957 MGI:4412315 MGI:4888085 NCBI chr 6:94,537,088...94,848,085
Ensembl chr 6:94,537,088...94,848,064 		JBrowse link
G Tmem201 transmembrane protein 201 involved_in ISO (PMID:19494128) RGD PMID:19494128 NCBI chr 5:160,166,240...160,188,874
Ensembl chr 5:160,166,427...160,188,843 		JBrowse link
establishment of centrosome localization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cep83 centrosomal protein 83 acts_upstream_of_or_within
involved_in		 ISO
IBA		 (MGI:5525917|PMID:23348840)
PMID:21873635		 RGD PMID:23348840 PMID:21873635 MGI:5525917, RGD:13792537 NCBI chr 7:29,280,358...29,389,574
Ensembl chr 7:29,280,419...29,389,574 		JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 involved_in ISO
IEA		 (PMID:20551903)
GO_REF:0000107		 RGD
Ensembl		 PMID:20551903 GO_REF:0000107 NCBI chr11:68,911,883...69,103,230
Ensembl chr11:68,911,883...69,102,689 		JBrowse link
G Ezr ezrin involved_in ISO
IEA		 (PMID:20551903)
GO_REF:0000107		 RGD
Ensembl		 PMID:20551903 GO_REF:0000107 NCBI chr 1:46,967,961...47,011,505
Ensembl chr 1:46,967,658...47,011,505 		JBrowse link
G Fhod1 formin homology 2 domain containing 1 acts_upstream_of_or_within ISO (MGI:5620590|PMID:24880667) RGD PMID:24880667 MGI:5620590 NCBI chr19:33,206,492...33,225,448
Ensembl chr19:33,206,492...33,225,356 		JBrowse link
G Mad2l1 mitotic arrest deficient 2 like 1 involved_in ISO (PMID:23509069) RGD PMID:23509069 NCBI chr 4:95,906,692...95,918,885
Ensembl chr 4:95,906,817...95,913,470 		JBrowse link
G Misp mitotic spindle positioning involved_in ISO (PMID:23509069), (PMID:23574715) RGD PMID:23509069 PMID:23574715 NCBI chr 7:9,870,390...9,886,541
Ensembl chr 7:9,870,444...9,886,541 		JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 IMP RGD PMID:17618279 RGD:4107031 NCBI chr10:59,533,042...59,591,808
Ensembl chr10:59,534,117...59,591,808 		JBrowse link
G Pard3 par-3 family cell polarity regulator involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:55,080,282...55,630,111
Ensembl chr19:55,080,282...55,629,778 		JBrowse link
G Pard3b par-3 family cell polarity regulator beta involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:63,038,435...64,067,178
Ensembl chr 9:63,038,436...64,068,053 		JBrowse link
G Pkhd1 PKHD1 ciliary IPT domain containing fibrocystin/polyductin involved_in ISO (PMID:32698519) RGD PMID:32698519 NCBI chr 9:22,547,396...23,037,443
Ensembl chr 9:22,549,513...23,037,381 		JBrowse link
maintenance of centrosome location term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap9 A-kinase anchoring protein 9 involved_in IBA
ISO		 PMID:21873635
(PMID:25657325)		 RGD PMID:25657325 PMID:21873635 RGD:13792537 NCBI chr 4:30,056,738...30,192,716
Ensembl chr 4:30,056,738...30,192,606 		JBrowse link
G Aspm assembly factor for spindle microtubules acts_upstream_of_or_within ISO (MGI:3654739|PMID:16798874) RGD PMID:16798874 MGI:3654739 NCBI chr13:51,074,849...51,123,755
Ensembl chr13:51,074,849...51,123,755 		JBrowse link
G Gpsm2 G-protein signaling modulator 2 involved_in ISO (PMID:21816348) RGD PMID:21816348 NCBI chr 2:196,327,149...196,375,322
Ensembl chr 2:196,327,149...196,375,154 		JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 acts_upstream_of_or_within ISO MGI:2384060 (MGI:5477842|PMID:23533177) RGD PMID:23533177 MGI:5477842 NCBI chr10:59,533,042...59,591,808
Ensembl chr10:59,534,117...59,591,808 		JBrowse link
G Spout1 SPOUT domain containing methyltransferase 1 involved_in ISO
IBA		 (PMID:25657325)
PMID:21873635		 RGD PMID:25657325 PMID:21873635 RGD:13792537 NCBI chr 3:13,451,191...13,458,918
Ensembl chr 3:13,451,202...13,493,355 		JBrowse link
G Tbccd1 TBCC domain containing 1 involved_in ISS
ISO
IBA		 GO_REF:0000024
(PMID:20168327)
PMID:21873635		 UniProt
RGD		 PMID:20168327 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr11:78,168,386...78,205,314
Ensembl chr11:78,168,388...78,205,523 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19574
    localization 5545
      microtubule organizing center localization 36
        centrosome localization + 35
        spindle pole body localization + 0
paths to the root