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ONTOLOGY REPORT - ANNOTATIONS


Term:cytoskeleton-dependent cytokinesis
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Accession:GO:0061640 term browser browse the term
Definition:A cytokinesis that involves the function of a set of proteins that are part of the microfilament or microtubule cytoskeleton.


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cytoskeleton-dependent cytokinesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dctn3 dynactin subunit 3 involved_in IEA Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936524:2,696,096...2,704,162 JBrowse link
G LOC101977053 IST1 factor associated with ESCRT-III involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:21,890,011...21,908,256 JBrowse link
actomyosin contractile ring assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101964793 programmed cell death 6 interacting protein involved_in ISO (MGI:5819325|PMID:27336173) UniProt PMID:27336173 MGI:5819325 NCBI chrNW_004936473:24,010,942...24,086,836 JBrowse link
G Racgap1 Rac GTPase activating protein 1 involved_in ISO (PMID:16129829) UniProt PMID:16129829 NCBI chrNW_004936512:7,665,144...7,696,615 JBrowse link
actomyosin contractile ring assembly actin filament organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101957084 plectin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:8,194,124...8,252,139 JBrowse link
cleavage furrow formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aurkb aurora kinase B involved_in ISO
IEA
RGD
Ensembl
PMID:9450992 GO_REF:0000107 RGD:730040 NCBI chrNW_004936595:1,435,601...1,437,423 JBrowse link
G Rhoa ras homolog family member A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:1,000,050...1,045,655 JBrowse link
G Snx18 sorting nexin 18 involved_in ISO (PMID:22718350) UniProt PMID:22718350 NCBI chrNW_004936480:13,108,510...13,137,550 JBrowse link
G Snx33 sorting nexin 33 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:34,414,086...34,425,236 JBrowse link
G Snx9 sorting nexin 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936489:9,736,255...9,804,841 JBrowse link
G Spire1 spire type actin nucleation factor 1 involved_in ISO (MGI:5050782|PMID:21620703) UniProt PMID:21620703 MGI:5050782 NCBI chrNW_004936626:2,151,990...2,292,307 JBrowse link
G Spire2 spire type actin nucleation factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936641:236,135...246,004 JBrowse link
cleavage furrow ingression term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alkbh4 alkB homolog 4, lysine demethylase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936543:1,883,353...1,889,159 JBrowse link
meiotic cytokinesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actr2 actin related protein 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5006872|PMID:21494665) MGI
Ensembl
PMID:21494665 GO_REF:0000107 MGI:5006872 NCBI chrNW_004936491:9,980,228...10,021,417 JBrowse link
G Actr3 actin related protein 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5006872|PMID:21494665) MGI
Ensembl
PMID:21494665 GO_REF:0000107 MGI:5006872 NCBI chrNW_004936469:55,639,345...55,699,330 JBrowse link
midbody abscission term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cep55 centrosomal protein 55 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936601:1,455,641...1,474,045 JBrowse link
G Chmp1a charged multivesicular body protein 1A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936641:366,563...376,303 JBrowse link
G Chmp1b charged multivesicular body protein 1B involved_in ISO (PMID:20616062) UniProt PMID:20616062 NCBI chrNW_004936626:391,942...394,440 JBrowse link
G Chmp2a charged multivesicular body protein 2A involved_in ISO (PMID:20616062) UniProt PMID:20616062 NCBI chrNW_004937062:133,361...136,329 JBrowse link
G Chmp2b charged multivesicular body protein 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936610:2,282,925...2,320,554 JBrowse link
G Chmp3 charged multivesicular body protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936712:1,023,994...1,044,727 JBrowse link
G Chmp4a charged multivesicular body protein 4A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936722:341,066...344,928 JBrowse link
G Chmp4b charged multivesicular body protein 4B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936561:6,756,360...6,798,964 JBrowse link
G Chmp4c charged multivesicular body protein 4C involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936656:2,531,654...2,558,106 JBrowse link
G Chmp5 charged multivesicular body protein 5 involved_in ISO (PMID:20616062) UniProt PMID:20616062 NCBI chrNW_004936524:1,804,643...1,820,491 JBrowse link
G Chmp6 charged multivesicular body protein 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936594:4,769,409...4,775,186 JBrowse link
G Chmp7 charged multivesicular body protein 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936555:6,730,284...6,757,816 JBrowse link
G Kif20a kinesin family member 20A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936531:7,361,928...7,371,397 JBrowse link
G LOC101964793 programmed cell death 6 interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:24,010,942...24,086,836 JBrowse link
G Mitd1 microtubule interacting and trafficking domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936661:1,619,703...1,632,558 JBrowse link
G Stx2 syntaxin 2 involved_in ISO PMID:12737809 CACAO PMID:12737809 RGD:1298908 NCBI chrNW_004936660:1,616,774...1,652,585 JBrowse link
G Vps4a vacuolar protein sorting 4 homolog A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:19,432,311...19,444,223 JBrowse link
G Vps4b vacuolar protein sorting 4 homolog B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936497:2,126,064...2,161,451 JBrowse link
mitotic cleavage furrow formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rhoa ras homolog family member A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:1,000,050...1,045,655 JBrowse link
mitotic cleavage furrow ingression term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arf1 ADP ribosylation factor 1 involved_in ISO (MGI:5883148|PMID:27535433) UniProt PMID:27535433 MGI:5883148 NCBI chrNW_004936864:117,510...119,612 JBrowse link
mitotic cytokinesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank3 ankyrin 3 involved_in ISO (PMID:14757759), (PMID:17620337) BHF-UCL PMID:14757759 PMID:17620337 NCBI chrNW_004936614:2,664,594...2,976,174 JBrowse link
G Anln anillin actin binding protein acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:10931866) MGI
Ensembl
PMID:10931866 GO_REF:0000107 NCBI chrNW_004936478:11,873,676...11,934,425 JBrowse link
G Apc APC regulator of WNT signaling pathway acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3789811|PMID:17893240)
(PMID:17570218)
(MGI:3759948|PMID:17570218)
MGI
Ensembl
InterPro
PMID:17570218 PMID:17893240 GO_REF:0000002 GO_REF:0000107 MGI:3759948 MGI:3789811 NCBI chrNW_004936531:6,899,580...7,019,016 JBrowse link
G Arl3 ADP ribosylation factor like GTPase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936600:3,190,212...3,229,831 JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:31,962,500...32,019,516 JBrowse link
G Birc5 baculoviral IAP repeat containing 5 involved_in ISO (PMID:12805209) UniProt PMID:12805209 NCBI chrNW_004936594:2,812,165...2,820,618 JBrowse link
G Cenpa centromere protein A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:5,715,274...5,720,816 JBrowse link
G Cep55 centrosomal protein 55 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:19638580) MGI
Ensembl
InterPro
PMID:19638580 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936601:1,455,641...1,474,045 JBrowse link
G Cfl1 cofilin 1 acts_upstream_of_or_within ISO (MGI:3575233|PMID:15548599) MGI PMID:15548599 MGI:3575233 NCBI chrNW_004936599:3,678,724...3,682,314 JBrowse link
G Chmp4b charged multivesicular body protein 4B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936561:6,756,360...6,798,964 JBrowse link
G Cit citron rho-interacting serine/threonine kinase involved_in IEA Ensembl
InterPro
UniProt
GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004936668:991,043...1,146,578 JBrowse link
G Ckap2 cytoskeleton associated protein 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:16061649) MGI
Ensembl
PMID:16061649 GO_REF:0000107 NCBI chrNW_004936565:4,872,142...4,896,449 JBrowse link
G Cul7 cullin 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:16,886,416...16,901,532 JBrowse link
G Daxx death domain associated protein acts_upstream_of_or_within ISO (MGI:3051070|PMID:15252119) MGI PMID:15252119 MGI:3051070 NCBI chrNW_004936476:25,546,091...25,550,390 JBrowse link
G Ect2 epithelial cell transforming 2 involved_in ISO (PMID:16236794) UniProt PMID:16236794 NCBI chrNW_004936703:5,744...45,636 JBrowse link
G Efhc1 EF-hand domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:8,347,907...8,401,224 JBrowse link
G Jtb jumping translocation breakpoint involved_in ISO (PMID:21225229) UniProt PMID:21225229 NCBI chrNW_004936580:3,720,252...3,722,375 JBrowse link
G Kif20a kinesin family member 20A involved_in IEA Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936531:7,361,928...7,371,397 JBrowse link
G Kif23 kinesin family member 23 involved_in ISO (PMID:15843429), (PMID:16236794) UniProt PMID:15843429 PMID:16236794 NCBI chrNW_004936471:29,154,618...29,177,865 JBrowse link
G Kif4a kinesin family member 4A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936762:1,062,570...1,194,192 JBrowse link
G LOC101958307 inner centromere protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936581:999,148...1,028,157 JBrowse link
G LOC101962200 STAM binding protein acts_upstream_of_or_within ISO (PMID:18388320) MGI PMID:18388320 NCBI chrNW_004936556:143,483...174,383 JBrowse link
G LOC101964793 programmed cell death 6 interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:24,010,942...24,086,836 JBrowse link
G Lzts2 leucine zipper tumor suppressor 2 involved_in IEA UniProt GO_REF:0000104 NCBI chrNW_004936600:4,678,788...4,688,825 JBrowse link
G Map9 microtubule associated protein 9 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936576:2,060,954...2,091,236 JBrowse link
G Mitd1 microtubule interacting and trafficking domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936661:1,619,703...1,632,558 JBrowse link
G Myh10 myosin heavy chain 10 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3052228|PMID:12893741)
(PMID:15774463)
MGI
Ensembl
PMID:12893741 PMID:15774463 GO_REF:0000107 MGI:3052228 NCBI chrNW_004936595:1,697,283...1,832,571 JBrowse link
G Nusap1 nucleolar and spindle associated protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:12963707) MGI
Ensembl
InterPro
PMID:12963707 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936471:4,705,757...4,732,446 JBrowse link
G Plk1 polo like kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:8,321,415...8,332,414 JBrowse link
G Rab35 RAB35, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936668:795,477...812,187 JBrowse link
G Racgap1 Rac GTPase activating protein 1 involved_in ISO (PMID:16236794), (PMID:23235882)
(PMID:11085985), (PMID:19468302)
UniProt PMID:11085985 PMID:16236794 PMID:19468302 PMID:23235882 NCBI chrNW_004936512:7,665,144...7,696,615 JBrowse link
G Rhob ras homolog family member B involved_in ISO (PMID:16236794) UniProt PMID:16236794 NCBI chrNW_004936493:10,987,801...10,990,207 JBrowse link
G Rhoc ras homolog family member C involved_in ISO (PMID:16236794) UniProt PMID:16236794 NCBI chrNW_004936690:1,255,126...1,258,288 JBrowse link
G Septin7 septin 7 acts_upstream_of_or_within ISO (MGI:5660256|PMID:25122120) MGI PMID:25122120 MGI:5660256 NCBI chrNW_004936478:11,419,334...11,528,954 JBrowse link
G Snx18 sorting nexin 18 involved_in ISO (PMID:22718350) UniProt PMID:22718350 NCBI chrNW_004936480:13,108,510...13,137,550 JBrowse link
G Snx33 sorting nexin 33 involved_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936471:34,414,086...34,425,236 JBrowse link
G Snx9 sorting nexin 9 involved_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936489:9,736,255...9,804,841 JBrowse link
G Son SON DNA and RNA binding protein acts_upstream_of
involved_in
ISO
IEA
(PMID:21504830) UniProt
Ensembl
PMID:21504830 GO_REF:0000107 NCBI chrNW_004936500:8,721,155...8,752,906 JBrowse link
G Spast spastin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:1,283,754...1,342,592 JBrowse link
G Sptbn1 spectrin beta, non-erythrocytic 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936491:920,830...1,108,374 JBrowse link
G Stmn1 stathmin 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5660256|PMID:25122120) MGI
Ensembl
PMID:25122120 GO_REF:0000107 MGI:5660256 NCBI chrNW_004936474:10,470,006...10,475,557 JBrowse link
G Stx2 syntaxin 2 involved_in ISO PMID:12737809 CACAO PMID:12737809 RGD:1298908 NCBI chrNW_004936660:1,616,774...1,652,585 JBrowse link
G Trim36 tripartite motif containing 36 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936742:317,095...352,509 JBrowse link
G Unc119 unc-119 lipid binding chaperone involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936538:4,772,236...4,778,149 JBrowse link
G Usp8 ubiquitin specific peptidase 8 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:18388320) MGI
Ensembl
PMID:18388320 GO_REF:0000107 NCBI chrNW_004936471:12,463,189...12,524,148 JBrowse link
G Zfyve26 zinc finger FYVE-type containing 26 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936495:11,132,025...11,191,446 JBrowse link
G Znf365 zinc finger protein 365 acts_upstream_of_or_within ISO (PMID:16617106) MGI PMID:16617106 NCBI chrNW_004936614:833,665...853,547 JBrowse link
mitotic cytokinetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cntrob centrobin, centriole duplication and spindle assembly protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936595:1,174,559...1,191,171 JBrowse link
G Klhdc8b kelch domain containing 8B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:863,052...872,067 JBrowse link
polar body extrusion after meiotic divisions term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fmn2 formin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936526:9,832,790...10,169,488 JBrowse link
G Kif20a kinesin family member 20A involved_in ISO (PMID:25036038) AgBase PMID:25036038 NCBI chrNW_004936531:7,361,928...7,371,397 JBrowse link
G Mei1 meiotic double-stranded break formation protein 1 acts_upstream_of_or_within ISO (MGI:6272222|PMID:30388401) MGI PMID:30388401 MGI:6272222 NCBI chrNW_004936492:196,829...277,052 JBrowse link
G Ndc80 NDC80 kinetochore complex component involved_in ISO (PMID:24752407) AgBase PMID:24752407 NCBI chrNW_004936672:1,872,205...1,910,956 JBrowse link
G Plk1 polo like kinase 1 ISO RGD PMID:12784254 RGD:1304387 NCBI chrNW_004936501:8,321,415...8,332,414 JBrowse link
G Rhoa ras homolog family member A involved_in ISO (PMID:25485583) AgBase PMID:25485583 NCBI chrNW_004936529:1,000,050...1,045,655 JBrowse link
G Spire1 spire type actin nucleation factor 1 involved_in ISO (MGI:5050782|PMID:21620703) UniProt PMID:21620703 MGI:5050782 NCBI chrNW_004936626:2,151,990...2,292,307 JBrowse link
G Spire2 spire type actin nucleation factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936641:236,135...246,004 JBrowse link
G Washc1 WASH complex subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936606:209,289...228,986 JBrowse link
G Washc5 WASH complex subunit 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:22,667,354...22,725,538 JBrowse link
positive regulation of mitotic cytokinesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Poldip2 DNA polymerase delta interacting protein 2 ISO RGD PMID:30726115 RGD:124713559 NCBI chrNW_004936538:4,504,039...4,512,785 JBrowse link
positive regulation of mitotic cytokinetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kif20b kinesin family member 20B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936601:4,457,142...4,517,693 JBrowse link
G Nup62 nucleoporin 62 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936664:3,690,728...3,713,819 JBrowse link
regulation of cytokinesis, actomyosin contractile ring assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ect2 epithelial cell transforming 2 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936703:5,744...45,636 JBrowse link
regulation of mitotic cytokinesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankrd53 ankyrin repeat domain 53 involved_in ISO (PMID:26820536) UniProt PMID:26820536 NCBI chrNW_004936491:15,149,146...15,153,961 JBrowse link
G Dcdc1 doublecortin domain containing 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936533:6,559,484...6,827,979 JBrowse link
G LOC101958307 inner centromere protein involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936581:999,148...1,028,157 JBrowse link
G Map9 microtubule associated protein 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936576:2,060,954...2,091,236 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 14983
    cellular process 13972
      cell cycle process 1039
        cytokinesis 141
          cytoskeleton-dependent cytokinesis 82
            actomyosin contractile ring organization + 4
            assembly of actomyosin apparatus involved in cytokinesis + 4
            cell plate formation involved in plant-type cell wall biogenesis 0
            cleavage furrow formation + 7
            cleavage furrow ingression + 2
            contractile ring contraction + 0
            contractile ring localization + 0
            contractile ring maintenance + 0
            meiotic cytokinesis + 12
            mitotic cytokinesis + 68
Path 2
Term Annotations click to browse term
  biological_process 14983
    cellular process 13972
      cell cycle 1346
        cell cycle process 1039
          cytokinesis 141
            cytoskeleton-dependent cytokinesis 82
              actomyosin contractile ring organization + 4
              assembly of actomyosin apparatus involved in cytokinesis + 4
              cell plate formation involved in plant-type cell wall biogenesis 0
              cleavage furrow formation + 7
              cleavage furrow ingression + 2
              contractile ring contraction + 0
              contractile ring localization + 0
              contractile ring maintenance + 0
              meiotic cytokinesis + 12
              mitotic cytokinesis + 68
paths to the root