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ONTOLOGY REPORT - ANNOTATIONS

Term:RNA polymerase II-specific DNA-binding transcription factor binding
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Accession:GO:0061629 term browser browse the term
Definition:Binding to a sequence-specific DNA binding RNA polymerase II transcription factor, any of the factors that interact selectively and non-covalently with a specific DNA sequence in order to modulate transcription.
Synonyms:exact_synonym: RNA polymerase II sequence-specific DNA binding transcription factor binding
 related_synonym: RNA polymerase II activating transcription factor binding;   RNA polymerase II repressing transcription factor binding;   RNA polymerase II transcription factor binding
 alt_id: GO:0001085;   GO:0001102;   GO:0001103


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RNA polymerase II-specific DNA-binding transcription factor binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADD1 adducin 1 enables ISO (PMID:16289097) BHF-UCL PMID:16289097 NCBI chr 3:61,356,643...61,443,851
Ensembl chr 3:61,358,162...61,474,830 		JBrowse link
G AHR aryl hydrocarbon receptor enables IEA Ensembl GO_REF:0000107 NCBI chr14:31,743,704...31,793,484
Ensembl chr14:31,686,170...31,791,444 		JBrowse link
G ANK3 ankyrin 3 enables IBA GO_Central GO_REF:0000033 NCBI chr 4:12,166,275...12,827,175
Ensembl chr 4:12,167,550...12,827,037 		JBrowse link
G ANKRD1 ankyrin repeat domain 1 enables IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr28:5,569,120...5,578,393
Ensembl chr28:5,569,501...5,601,956 		JBrowse link
G ANKRD2 ankyrin repeat domain 2 enables IBA GO_Central GO_REF:0000033 NCBI chr28:10,838,677...10,848,406
Ensembl chr28:10,834,411...10,848,406 		JBrowse link
G AR androgen receptor enables IEA Ensembl GO_REF:0000107 NCBI chr24:34,713,390...34,731,461
NCBI chr  X:51,969,785...52,167,450
Ensembl chr  X:51,969,785...52,151,912 		JBrowse link
G ARNT aryl hydrocarbon receptor nuclear translocator enables IEA Ensembl GO_REF:0000107 Ensembl chr17:59,941,353...60,010,867
Ensembl chr17:59,941,353...60,010,867 		JBrowse link
G ATF2 activating transcription factor 2 enables IEA Ensembl GO_REF:0000107 NCBI chr36:19,032,376...19,103,382
Ensembl chr36:19,010,717...19,103,292 		JBrowse link
G ATF4 activating transcription factor 4 enables IEA Ensembl GO_REF:0000107 NCBI chr10:25,528,880...25,531,018
Ensembl chr10:25,528,874...25,530,993 		JBrowse link
G BBS1 Bardet-Biedl syndrome 1 enables IEA Ensembl GO_REF:0000107 NCBI chr18:50,816,126...50,835,354 JBrowse link
G BBS10 Bardet-Biedl syndrome 10 enables IEA Ensembl GO_REF:0000107
G BBS2 Bardet-Biedl syndrome 2 enables IEA Ensembl GO_REF:0000107 NCBI chr 2:59,650,439...59,705,728
Ensembl chr 2:59,677,216...59,705,730 		JBrowse link
G BBS4 Bardet-Biedl syndrome 4 enables ISO (PMID:22302990) MGI PMID:22302990 NCBI chr30:36,058,932...36,109,206
Ensembl chr30:35,927,233...36,108,381 		JBrowse link
G BBS5 Bardet-Biedl syndrome 5 enables IEA Ensembl GO_REF:0000107 NCBI chr36:14,206,917...14,233,726
Ensembl chr36:14,207,014...14,233,633 		JBrowse link
G BBS7 Bardet-Biedl syndrome 7 enables IEA Ensembl GO_REF:0000107 NCBI chr19:18,280,487...18,319,128
Ensembl chr19:18,280,520...18,315,825 		JBrowse link
G BHLHE40 basic helix-loop-helix family member e40 enables IEA Ensembl GO_REF:0000107 NCBI chr20:12,641,872...12,647,519
Ensembl chr20:12,642,702...12,647,525 		JBrowse link
G BHLHE41 basic helix-loop-helix family member e41 enables IEA Ensembl GO_REF:0000107 NCBI chr27:21,464,302...21,469,119 JBrowse link
G CD34 CD34 molecule enables IEA Ensembl GO_REF:0000107 NCBI chr 7:6,734,363...6,747,991
Ensembl chr 7:6,734,363...6,748,581 		JBrowse link
G CDKN2A cyclin dependent kinase inhibitor 2A enables ISO (PMID:19057511) BHF-UCL PMID:19057511 NCBI chr11:41,223,316...41,226,056
Ensembl chr11:41,223,315...41,264,379 		JBrowse link
G CEBPA CCAAT enhancer binding protein alpha enables ISO (PMID:24429361) ARUK-UCL PMID:24429361 NCBI chr 1:118,846,252...118,851,045 JBrowse link
G CEBPB CCAAT enhancer binding protein beta enables ISO PMID:1547942 ParkinsonsUK-UCL PMID:1547942 RGD:10047202 NCBI chr24:36,661,294...36,663,162
Ensembl chr24:36,661,616...36,662,656 		JBrowse link
G CHD4 chromodomain helicase DNA binding protein 4 enables IEA Ensembl GO_REF:0000107 NCBI chr27:38,411,009...38,440,367
Ensembl chr27:38,411,075...38,439,958 		JBrowse link
G CIITA class II major histocompatibility complex transactivator enables ISO (PMID:19041327) BHF-UCL PMID:19041327 NCBI chr 6:31,774,486...31,837,025
Ensembl chr 6:31,774,609...31,836,820 		JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 enables IEA Ensembl GO_REF:0000107 NCBI chr 1:31,522,911...31,525,342
Ensembl chr 1:31,523,799...31,524,995 		JBrowse link
G CREB1 cAMP responsive element binding protein 1 enables IEA Ensembl GO_REF:0000107 NCBI chr37:15,921,214...15,978,492
Ensembl chr37:15,939,138...15,977,556 		JBrowse link
G CREBBP CREB binding protein enables IEA Ensembl GO_REF:0000107 NCBI chr 6:37,410,201...37,536,688
Ensembl chr 6:37,409,930...37,534,176 		JBrowse link
G CRKL CRK like proto-oncogene, adaptor protein enables IEA Ensembl GO_REF:0000107 NCBI chr26:30,542,276...30,582,479
Ensembl chr26:30,545,311...30,581,964 		JBrowse link
G CSNK2B casein kinase 2 beta enables IEA Ensembl GO_REF:0000107 NCBI chr12:1,149,467...1,154,417
Ensembl chr12:1,149,548...1,154,418 		JBrowse link
G CSRP3 cysteine and glycine rich protein 3 enables ISO PMID:9234731 MGI PMID:9234731 RGD:10047266 NCBI chr21:41,300,277...41,318,788
Ensembl chr21:41,300,425...41,318,738 		JBrowse link
G CTBP1 C-terminal binding protein 1 enables ISO (PMID:14701752) UniProt PMID:14701752 NCBI chr 3:91,385,733...91,400,252
Ensembl chr 3:91,379,049...91,400,656 		JBrowse link
G CTNNB1 catenin beta 1 enables ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr23:10,559,722...10,572,933
Ensembl chr23:10,559,718...10,572,927 		JBrowse link
G DACT1 dishevelled binding antagonist of beta catenin 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 8:33,950,016...33,959,671
Ensembl chr 8:33,949,926...33,958,449 		JBrowse link
G DAXX death domain associated protein enables ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr12:2,755,960...2,760,687
Ensembl chr12:2,755,960...2,761,340 		JBrowse link
G DDIT3 DNA damage inducible transcript 3 enables IEA Ensembl GO_REF:0000107 NCBI chr10:1,606,693...1,612,410
Ensembl chr10:1,606,693...1,611,303 		JBrowse link
G DHX9 DExH-box helicase 9 enables IEA Ensembl GO_REF:0000107 NCBI chr 7:16,233,763...16,292,576
Ensembl chr 7:16,233,814...16,292,618 		JBrowse link
G DMAP1 DNA methyltransferase 1 associated protein 1 enables IEA Ensembl GO_REF:0000107 NCBI chr15:16,077,164...16,085,666
Ensembl chr15:16,077,206...16,085,687 		JBrowse link
G DNAJA3 DnaJ heat shock protein family (Hsp40) member A3 enables ISO (PMID:16531398) UniProt PMID:16531398 NCBI chr 6:36,921,941...36,967,718
Ensembl chr 6:36,917,858...36,967,689 		JBrowse link
G DNMT3A DNA methyltransferase 3 alpha enables IEA Ensembl GO_REF:0000107 NCBI chr17:19,489,524...19,563,074
Ensembl chr17:19,492,193...19,563,902 		JBrowse link
G DOT1L DOT1 like histone lysine methyltransferase enables ISO (PMID:22002246) UniProt PMID:22002246 NCBI chr20:56,805,030...56,868,771
Ensembl chr20:56,803,242...56,852,539 		JBrowse link
G DUSP26 dual specificity phosphatase 26 enables IEA Ensembl GO_REF:0000107 NCBI chr16:31,115,317...31,122,767
Ensembl chr16:31,115,475...31,132,033 		JBrowse link
G E4F1 E4F transcription factor 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 6:38,743,346...38,752,427
Ensembl chr 6:38,743,355...38,752,403 		JBrowse link
G EGR2 early growth response 2 enables IEA Ensembl GO_REF:0000107 NCBI chr 4:14,705,384...14,810,130
Ensembl chr 4:14,706,600...14,709,497 		JBrowse link
G ELK1 ETS transcription factor ELK1 enables IEA Ensembl GO_REF:0000107 NCBI chr  X:41,256,205...41,270,656
Ensembl chr  X:41,257,482...41,270,776 		JBrowse link
G EOMES eomesodermin enables ISO (PMID:22164283) BHF-UCL PMID:22164283 NCBI chr23:16,476,498...16,512,406
Ensembl chr23:16,506,032...16,511,527 		JBrowse link
G EP300 E1A binding protein p300 enables IEA Ensembl GO_REF:0000107 NCBI chr10:24,076,538...24,156,708
Ensembl chr10:24,077,971...24,156,396 		JBrowse link
G EPAS1 endothelial PAS domain protein 1 enables IEA Ensembl GO_REF:0000107 NCBI chr10:48,550,836...48,636,776
Ensembl chr10:48,551,410...48,634,844 		JBrowse link
G ESRRB estrogen related receptor beta enables ISO (PMID:18662995) BHF-UCL PMID:18662995 NCBI chr 8:49,253,877...49,424,148
Ensembl chr 8:49,253,332...49,421,332 		JBrowse link
G ETS1 ETS proto-oncogene 1, transcription factor enables ISO (PMID:11909962) BHF-UCL PMID:11909962 NCBI chr 5:6,059,023...6,189,516
Ensembl chr 5:6,058,935...6,186,232 		JBrowse link
G ETS2 ETS proto-oncogene 2, transcription factor enables IEA Ensembl GO_REF:0000107 NCBI chr31:33,846,821...33,861,394
Ensembl chr31:33,839,010...33,860,330 		JBrowse link
G EXOSC9 exosome component 9 ISO RGD PMID:9148967 RGD:10755760 NCBI chr19:18,324,117...18,336,628
Ensembl chr19:18,324,119...18,336,602 		JBrowse link
G FBP1 fructose-bisphosphatase 1 enables ISO (PMID:25043030) CAFA PMID:25043030 NCBI chr 1:72,099,886...72,125,266
Ensembl chr 1:72,099,881...72,125,224 		JBrowse link
G FOS Fos proto-oncogene, AP-1 transcription factor subunit enables IEA Ensembl GO_REF:0000107 NCBI chr 8:48,330,856...48,334,273
Ensembl chr 8:48,331,026...48,333,467 		JBrowse link
G FOXA1 forkhead box A1 enables ISO PMID:17220277 ARUK-UCL PMID:17220277 RGD:8554147 NCBI chr 8:16,072,629...16,083,105
Ensembl chr 8:16,079,140...16,083,807 		JBrowse link
G FOXC1 forkhead box C1 enables IEA Ensembl GO_REF:0000107
G GATA1 GATA binding protein 1 enables IEA Ensembl GO_REF:0000107 NCBI chr  X:41,991,321...41,998,319
Ensembl chr  X:41,971,582...41,998,303 		JBrowse link
G GATA2 GATA binding protein 2 enables IEA Ensembl GO_REF:0000107 NCBI chr20:2,472,251...2,488,380
Ensembl chr20:2,473,912...2,480,991 		JBrowse link
G GATA3 GATA binding protein 3 enables IEA Ensembl GO_REF:0000107 NCBI chr 2:28,068,143...28,098,445
Ensembl chr 2:28,069,051...28,087,760 		JBrowse link
G GATA4 GATA binding protein 4 enables IEA Ensembl GO_REF:0000107 NCBI chr25:26,126,172...26,211,474
Ensembl chr25:26,127,853...26,182,989 		JBrowse link
G GATA6 GATA binding protein 6 enables IEA Ensembl GO_REF:0000107 NCBI chr 7:65,932,114...65,962,574 JBrowse link
G GBX2 gastrulation brain homeobox 2 enables IEA Ensembl GO_REF:0000107 NCBI chr25:47,005,509...47,008,367
Ensembl chr25:47,005,504...47,008,512 		JBrowse link
G GFI1B growth factor independent 1B transcriptional repressor enables IEA Ensembl GO_REF:0000107 NCBI chr 9:51,380,697...51,394,679
Ensembl chr 9:51,380,696...51,392,812 		JBrowse link
G GSC goosecoid homeobox enables IEA Ensembl GO_REF:0000107 NCBI chr 8:63,684,149...63,707,030
Ensembl chr 8:63,684,137...63,707,054 		JBrowse link
G GSK3B glycogen synthase kinase 3 beta enables IEA Ensembl GO_REF:0000107 NCBI chr33:23,458,369...23,659,878
Ensembl chr33:23,463,767...23,659,666 		JBrowse link
G GTF2A1 general transcription factor IIA subunit 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 8:53,520,740...53,568,888
Ensembl chr 8:53,524,787...53,568,705 		JBrowse link
G GTF2A2 general transcription factor IIA subunit 2 enables ISO (PMID:19235719) MGI PMID:19235719 NCBI chr30:24,502,825...24,522,248
Ensembl chr30:24,484,701...24,522,207 		JBrowse link
G GTF2I general transcription factor IIi enables IEA Ensembl GO_REF:0000107 NCBI chr 6:5,726,652...5,840,740
Ensembl chr 6:5,727,665...5,811,965 		JBrowse link
G HAND1 heart and neural crest derivatives expressed 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 4:55,231,061...55,234,640
Ensembl chr 4:55,231,481...55,234,265 		JBrowse link
G HAND2 heart and neural crest derivatives expressed 2 enables IEA Ensembl GO_REF:0000107 NCBI chr25:24,140,496...24,143,143
Ensembl chr25:24,141,243...24,152,958 		JBrowse link
G HCLS1 hematopoietic cell-specific Lyn substrate 1 enables IEA Ensembl GO_REF:0000107 NCBI chr33:24,901,023...24,925,710
Ensembl chr33:24,901,287...24,922,923 		JBrowse link
G HDAC1 histone deacetylase 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 2:68,901,339...68,936,473
Ensembl chr 2:68,901,651...68,936,186 		JBrowse link
G HDAC2 histone deacetylase 2 enables IEA Ensembl GO_REF:0000107 NCBI chr12:70,053,822...70,083,491
Ensembl chr12:70,053,297...70,103,578 		JBrowse link
G HDAC4 histone deacetylase 4 enables ISO (PMID:23867755)
(PMID:19071119)
(PMID:18850004)		 UniProt
BHF-UCL		 PMID:18850004 PMID:19071119 PMID:23867755 NCBI chr25:49,318,621...49,545,314
Ensembl chr25:49,317,349...49,453,478 		JBrowse link
G HDAC5 histone deacetylase 5 enables IEA Ensembl GO_REF:0000107 NCBI chr 9:19,261,075...19,297,669
Ensembl chr 9:19,260,893...19,297,623 		JBrowse link
G HDAC9 histone deacetylase 9 enables IEA Ensembl GO_REF:0000107 NCBI chr14:32,469,349...33,310,439
Ensembl chr14:32,588,414...33,304,387 		JBrowse link
G HES1 hes family bHLH transcription factor 1 enables IEA Ensembl GO_REF:0000107
G HES6 hes family bHLH transcription factor 6 enables IEA Ensembl GO_REF:0000107 NCBI chr25:48,710,694...48,713,392 JBrowse link
G HEY1 hes related family bHLH transcription factor with YRPW motif 1 enables IEA Ensembl GO_REF:0000107 NCBI chr29:27,185,191...27,188,121
Ensembl chr29:27,185,191...27,188,121 		JBrowse link
G HEY2 hes related family bHLH transcription factor with YRPW motif 2 enables IEA Ensembl GO_REF:0000107 NCBI chr 1:64,630,656...64,646,546 JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha enables IEA Ensembl GO_REF:0000107 NCBI chr 8:36,614,045...36,656,692
Ensembl chr 8:36,614,045...36,656,692 		JBrowse link
G HIF1AN hypoxia inducible factor 1 subunit alpha inhibitor enables ISO (PMID:19071119) BHF-UCL PMID:19071119 NCBI chr28:13,253,646...13,277,997
Ensembl chr28:13,258,765...13,267,608 		JBrowse link
G HIPK2 homeodomain interacting protein kinase 2 enables IEA Ensembl GO_REF:0000107 NCBI chr16:9,066,957...9,256,916
Ensembl chr16:9,066,970...9,244,526 		JBrowse link
G HIRA histone cell cycle regulator enables IEA Ensembl GO_REF:0000107 NCBI chr26:29,777,984...29,867,992
Ensembl chr26:29,778,086...29,867,559 		JBrowse link
G HMGA2 high mobility group AT-hook 2 enables IEA Ensembl GO_REF:0000107 NCBI chr10:8,348,101...8,491,435 JBrowse link
G HMGB1 high mobility group box 1 enables IEA Ensembl GO_REF:0000107 NCBI chr25:9,431,223...9,558,167
Ensembl chr25:9,431,218...9,558,165 		JBrowse link
G HNF4A hepatocyte nuclear factor 4 alpha enables IEA Ensembl GO_REF:0000107 NCBI chr24:31,847,864...31,908,337
Ensembl chr24:31,847,961...31,905,916 		JBrowse link
G HSPA4 heat shock protein family A (Hsp70) member 4 ISO RGD PMID:17473852 RGD:5688754 NCBI chr11:21,290,603...21,363,701
Ensembl chr11:21,290,621...21,505,122 		JBrowse link
G HSPB1 heat shock protein family B (small) member 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 6:7,487,164...7,488,576
Ensembl chr 6:7,487,250...7,488,576 		JBrowse link
G ID2 inhibitor of DNA binding 2 enables IEA Ensembl GO_REF:0000107 NCBI chr17:5,956,924...5,958,833 JBrowse link
G ID4 inhibitor of DNA binding 4, HLH protein enables IEA Ensembl GO_REF:0000107 NCBI chr35:18,358,518...18,360,767
Ensembl chr35:18,357,826...18,359,011
Ensembl chr35:18,357,826...18,359,011 		JBrowse link
G IFRD1 interferon related developmental regulator 1 enables ISO PMID:15743821 MGI PMID:15743821 RGD:10047350 NCBI chr14:52,053,423...52,078,419
Ensembl chr14:52,053,434...52,092,365 		JBrowse link
G ISL1 ISL LIM homeobox 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 4:63,638,009...63,648,492
Ensembl chr 4:63,637,443...63,648,183 		JBrowse link
G JUN Jun proto-oncogene, AP-1 transcription factor subunit enables IEA Ensembl GO_REF:0000107 NCBI chr 5:50,966,698...50,968,939 JBrowse link
G KAT8 lysine acetyltransferase 8 enables IEA Ensembl GO_REF:0000107 NCBI chr 6:17,114,528...17,125,287
Ensembl chr 6:17,114,528...17,125,203 		JBrowse link
G KDM1A lysine demethylase 1A enables ISO (PMID:20123967) BHF-UCL PMID:20123967 NCBI chr 2:76,313,742...76,375,716
Ensembl chr 2:76,156,434...76,375,632 		JBrowse link
G KDM5C lysine demethylase 5C enables ISO (PMID:18078810) MGI PMID:18078810 NCBI chr  X:44,921,271...44,953,338
Ensembl chr  X:44,921,816...44,952,616 		JBrowse link
G KEAP1 kelch like ECH associated protein 1 enables IEA Ensembl GO_REF:0000107 NCBI chr20:50,651,070...50,661,178
Ensembl chr20:50,650,711...50,658,496 		JBrowse link
G KLF4 KLF transcription factor 4 enables IEA Ensembl GO_REF:0000107 NCBI chr11:62,881,840...62,886,676
Ensembl chr11:62,882,767...62,928,251 		JBrowse link
G LDB1 LIM domain binding 1 enables IEA Ensembl GO_REF:0000107 NCBI chr28:14,646,409...14,658,324
Ensembl chr28:14,646,056...14,658,548 		JBrowse link
G LHX3 LIM homeobox 3 enables IEA Ensembl GO_REF:0000107 NCBI chr 9:49,248,555...49,254,128
Ensembl chr 9:49,248,621...49,254,118 		JBrowse link
G LMO2 LIM domain only 2 enables ISO (PMID:16314316) BHF-UCL PMID:16314316
G LOC100688777 Bardet-Biedl syndrome 10 enables IEA Ensembl GO_REF:0000107 NCBI chr15:19,302,988...19,334,763
Ensembl chr15:19,331,876...19,335,583 		JBrowse link
G LOC102151783 inhibitor of DNA binding 2 enables ISO (PMID:10652346) ARUK-UCL PMID:10652346 NCBI chr10:54,954,852...54,957,116 JBrowse link
G LOC119879221 zinc finger and BTB domain-containing protein 8A enables IEA Ensembl GO_REF:0000107
G LOC487079 homeobox protein Mohawk enables ISO (PMID:19235719) MGI PMID:19235719 NCBI chr 2:5,898,155...5,964,577 JBrowse link
G LPIN1 lipin 1 enables ISO (PMID:20385772) MGI PMID:20385772 NCBI chr17:8,348,860...8,480,447
Ensembl chr17:8,348,886...8,478,863 		JBrowse link
G MAD2L2 mitotic arrest deficient 2 like 2 enables IEA Ensembl GO_REF:0000107 NCBI chr 2:84,539,724...84,549,402
Ensembl chr 2:84,545,226...84,549,356 		JBrowse link
G MED1 mediator complex subunit 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 9:22,989,257...23,019,350
Ensembl chr 9:22,989,301...23,019,349 		JBrowse link
G MEF2A myocyte enhancer factor 2A enables IEA Ensembl GO_REF:0000107 NCBI chr 3:41,012,103...41,177,588
Ensembl chr 3:41,015,713...41,179,448 		JBrowse link
G MEF2C myocyte enhancer factor 2C enables IEA Ensembl GO_REF:0000107 NCBI chr 3:19,778,997...19,948,203
Ensembl chr 3:19,779,007...19,943,852 		JBrowse link
G MEF2D myocyte enhancer factor 2D enables IEA Ensembl GO_REF:0000107 NCBI chr 7:41,455,771...41,473,807
Ensembl chr 7:41,458,514...41,470,197 		JBrowse link
G MIXL1 Mix paired-like homeobox enables ISO (PMID:22164283) BHF-UCL PMID:22164283 NCBI chr 7:38,651,481...38,652,560 JBrowse link
G MIXL1 Mix paired-like homeobox enables IEA Ensembl GO_REF:0000107
G MKKS MKKS centrosomal shuttling protein enables IEA Ensembl GO_REF:0000107 NCBI chr24:11,887,504...11,914,055
Ensembl chr24:11,898,236...11,913,740 		JBrowse link
G MLX MAX dimerization protein MLX enables ISO (PMID:11230181)
(PMID:18606808)		 BHF-UCL
MGI		 PMID:11230181 PMID:18606808 NCBI chr 9:20,391,762...20,395,792
Ensembl chr 9:20,391,762...20,395,735 		JBrowse link
G MLXIPL MLX interacting protein like enables IEA Ensembl GO_REF:0000107 NCBI chr 6:6,617,398...6,652,201
Ensembl chr 6:6,633,231...6,652,198 		JBrowse link
G MTA1 metastasis associated 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 8:72,752,894...72,772,236
Ensembl chr 8:72,753,178...72,772,762 		JBrowse link
G MTA2 metastasis associated 1 family member 2 enables IEA Ensembl GO_REF:0000107 NCBI chr18:54,038,073...54,046,376
Ensembl chr18:54,038,212...54,046,059 		JBrowse link
G MTDH metadherin enables ISO (PMID:18316612) UniProt PMID:18316612 NCBI chr29:41,675,601...41,732,389
Ensembl chr29:41,640,035...41,729,949 		JBrowse link
G MYOCD myocardin enables IEA Ensembl GO_REF:0000107 NCBI chr 5:36,674,476...36,774,435
Ensembl chr 5:36,674,300...36,769,327 		JBrowse link
G MYOD1 myogenic differentiation 1 enables IEA Ensembl GO_REF:0000107 NCBI chr21:40,257,792...40,260,461
Ensembl chr21:40,258,027...40,259,712 		JBrowse link
G NCOA2 nuclear receptor coactivator 2 enables IEA Ensembl GO_REF:0000107 NCBI chr29:19,253,849...19,471,640
Ensembl chr29:19,222,842...19,545,371 		JBrowse link
G NCOR1 nuclear receptor corepressor 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 5:39,687,530...39,837,003
Ensembl chr 5:39,687,543...39,836,464 		JBrowse link
G NEUROD1 neuronal differentiation 1 enables ISO (PMID:10545951)
(PMID:16321656), (PMID:19619559)		 BHF-UCL PMID:10545951 PMID:16321656 PMID:19619559 NCBI chr36:24,853,591...24,857,886 JBrowse link
G NFATC1 nuclear factor of activated T cells 1 enables ISO (PMID:15304486) BHF-UCL PMID:15304486 NCBI chr 1:1,027,021...1,121,362
Ensembl chr 1:1,028,695...1,121,588 		JBrowse link
G NFE2L2 NFE2 like bZIP transcription factor 2 enables IEA Ensembl GO_REF:0000107 NCBI chr36:20,989,205...21,087,044
Ensembl chr36:20,989,360...21,012,524 		JBrowse link
G NHLH2 nescient helix-loop-helix 2 enables ISO (PMID:18356286) UniProt PMID:18356286 NCBI chr17:53,359,275...53,363,753
Ensembl chr17:53,359,258...53,458,795 		JBrowse link
G NIF3L1 NGG1 interacting factor 3 like 1 enables IEA Ensembl GO_REF:0000107 NCBI chr37:10,082,823...10,136,647
Ensembl chr37:10,083,104...10,107,050 		JBrowse link
G NKX2-1 NK2 homeobox 1 enables IEA Ensembl GO_REF:0000107
G NKX2-5 NK2 homeobox 5 enables IEA Ensembl GO_REF:0000107 NCBI chr 4:39,240,755...39,254,585
Ensembl chr 4:39,244,286...39,247,592 		JBrowse link
G NOS1 nitric oxide synthase 1 ISO RGD PMID:26607632 RGD:597538583 NCBI chr26:13,787,341...13,895,176
Ensembl chr26:13,786,309...13,962,332 		JBrowse link
G NR0B1 nuclear receptor subfamily 0 group B member 1 enables ISO (PMID:19651776) BHF-UCL PMID:19651776 NCBI chr  X:25,396,527...25,401,587
Ensembl chr  X:25,396,527...25,401,715 		JBrowse link
G PARP1 poly(ADP-ribose) polymerase 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 7:38,503,072...38,542,556
Ensembl chr 7:38,503,067...38,542,127 		JBrowse link
G PDX1 pancreatic and duodenal homeobox 1 enables ISO PMID:21108535 BHF-UCL PMID:21108535 RGD:8553608 NCBI chr25:11,741,863...11,746,885
Ensembl chr25:11,741,863...11,746,885 		JBrowse link
G PIAS2 protein inhibitor of activated STAT 2 enables IEA Ensembl GO_REF:0000107 NCBI chr 7:44,436,100...44,583,657
Ensembl chr 7:44,454,095...44,583,657 		JBrowse link
G PITX1 paired like homeodomain 1 enables ISO (PMID:26612202) UniProt PMID:26612202 NCBI chr11:23,069,731...23,075,085
Ensembl chr11:23,069,716...23,080,941 		JBrowse link
G PITX2 paired like homeodomain 2 enables IEA Ensembl GO_REF:0000107 NCBI chr32:30,710,161...30,730,162
Ensembl chr32:30,710,685...30,730,273 		JBrowse link
G POU1F1 POU class 1 homeobox 1 enables IEA Ensembl GO_REF:0000107 NCBI chr31:769,454...788,761
Ensembl chr31:769,487...787,626 		JBrowse link
G POU4F1 POU class 4 homeobox 1 enables IEA Ensembl GO_REF:0000107 NCBI chr22:31,992,657...31,997,066 JBrowse link
G POU5F1 POU class 5 homeobox 1 enables ISO (PMID:19736317)
(PMID:18662995)		 BHF-UCL PMID:18662995 PMID:19736317
G PPARA peroxisome proliferator activated receptor alpha enables ISO (PMID:19955185) BHF-UCL PMID:19955185 NCBI chr10:19,934,020...20,006,096
Ensembl chr10:19,934,165...20,006,146 		JBrowse link
G PPARGC1A PPARG coactivator 1 alpha enables IEA Ensembl GO_REF:0000107 NCBI chr 3:85,645,942...86,284,570
Ensembl chr 3:86,016,140...86,281,269 		JBrowse link
G PRDM13 PR/SET domain 13 enables ISO (PMID:23639443) ARUK-UCL PMID:23639443 NCBI chr12:57,803,068...57,811,592 JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit enables IEA Ensembl GO_REF:0000107 NCBI chr29:24,904...243,926
Ensembl chr29:35,007...243,895 		JBrowse link
G PRRX1 paired related homeobox 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 7:28,065,570...28,138,734
Ensembl chr 7:28,068,711...28,138,787 		JBrowse link
G PSMD10 proteasome 26S subunit, non-ATPase 10 enables IBA GO_Central GO_REF:0000033 NCBI chr  X:81,625,288...81,632,175
Ensembl chr  X:81,625,141...81,632,129 		JBrowse link
G RAD23B RAD23 homolog B, nucleotide excision repair protein enables IEA Ensembl GO_REF:0000107 NCBI chr11:62,732,989...62,778,957
Ensembl chr11:62,732,984...62,775,978 		JBrowse link
G RB1 RB transcriptional corepressor 1 enables IEA Ensembl GO_REF:0000107 NCBI chr22:3,061,621...3,204,625
Ensembl chr22:3,063,239...3,257,726 		JBrowse link
G RBBP8 RB binding protein 8, endonuclease enables IEA Ensembl GO_REF:0000107 NCBI chr 7:65,218,288...65,319,696
Ensembl chr 7:65,218,297...65,297,099 		JBrowse link
G RBPJ recombination signal binding protein for immunoglobulin kappa J region enables IEA Ensembl GO_REF:0000107 NCBI chr 3:84,060,417...84,286,008
Ensembl chr 3:84,064,440...84,286,360 		JBrowse link
G RBX1 ring-box 1 enables IEA Ensembl GO_REF:0000107 NCBI chr10:24,265,733...24,280,253
Ensembl chr10:24,266,408...24,280,235 		JBrowse link
G REST RE1 silencing transcription factor enables ISO (PMID:17130167) UniProt PMID:17130167 RGD:8553999 NCBI chr13:49,041,082...49,062,596
Ensembl chr13:49,041,047...49,059,388 		JBrowse link
G SALL1 spalt like transcription factor 1 enables ISO (PMID:21062744) BHF-UCL PMID:21062744 NCBI chr 2:64,242,742...64,260,021
Ensembl chr 2:64,243,987...64,259,521 		JBrowse link
G SDR16C5 short chain dehydrogenase/reductase family 16C member 5 enables IEA Ensembl GO_REF:0000107 NCBI chr29:7,660,882...7,679,705
Ensembl chr29:7,661,633...7,679,622 		JBrowse link
G SETD1A SET domain containing 1A, histone lysine methyltransferase enables IEA Ensembl GO_REF:0000107 NCBI chr 6:17,224,107...17,246,527
Ensembl chr 6:17,224,694...17,245,870 		JBrowse link
G SETD3 SET domain containing 3, actin N3(tau)-histidine methyltransferase enables IEA Ensembl GO_REF:0000107 NCBI chr 8:67,821,394...67,899,814
Ensembl chr 8:67,821,968...67,886,557 		JBrowse link
G SIN3A SIN3 transcription regulator family member A enables IEA Ensembl GO_REF:0000107 NCBI chr30:38,231,844...38,306,665
Ensembl chr30:38,232,680...38,382,635 		JBrowse link
G SMAD2 SMAD family member 2 enables ISO (PMID:11937490) UniProt PMID:11937490 NCBI chr 7:43,696,883...43,778,063
Ensembl chr 7:43,700,445...43,769,983 		JBrowse link
G SMAD3 SMAD family member 3 enables IEA Ensembl GO_REF:0000107 NCBI chr30:31,246,313...31,360,098
Ensembl chr30:31,245,657...31,363,337 		JBrowse link
G SMAD4 SMAD family member 4 enables IEA Ensembl GO_REF:0000107 NCBI chr 1:23,875,989...23,930,027
Ensembl chr 1:23,882,139...23,969,405 		JBrowse link
G SMARCA1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 enables ISO (PMID:27141965) ParkinsonsUK-UCL PMID:27141965 NCBI chr  X:100,678,457...100,749,216
Ensembl chr  X:100,679,942...100,749,651 		JBrowse link
G SOX17 SRY-box transcription factor 17 enables IEA Ensembl GO_REF:0000107 NCBI chr29:5,979,092...5,981,504
Ensembl chr29:5,979,261...5,981,124 		JBrowse link
G SOX2 SRY-box transcription factor 2 enables ISO (PMID:25901318) MGI PMID:25901318 NCBI chr34:14,853,000...14,855,153 JBrowse link
G SP1 Sp1 transcription factor enables ISO (PMID:12657651) BHF-UCL PMID:12657651 NCBI chr27:1,802,587...1,861,187
Ensembl chr27:1,805,184...1,847,226 		JBrowse link
G SP100 SP100 nuclear antigen enables ISO (PMID:11909962) BHF-UCL PMID:11909962 NCBI chr25:42,538,428...42,635,825
Ensembl chr25:42,538,571...42,635,649 		JBrowse link
G SP3 Sp3 transcription factor enables IEA Ensembl GO_REF:0000107 NCBI chr36:18,023,750...18,086,995
Ensembl chr36:18,024,627...18,077,587 		JBrowse link
G SPEN spen family transcriptional repressor enables IEA Ensembl GO_REF:0000107 NCBI chr 2:81,683,824...81,775,904 JBrowse link
G SPI1 Spi-1 proto-oncogene enables IEA Ensembl GO_REF:0000107 NCBI chr18:42,253,849...42,269,497
Ensembl chr18:42,253,811...42,269,727 		JBrowse link
G SPOP speckle type BTB/POZ protein enables ISO (PMID:19684112) MGI PMID:19684112 NCBI chr 9:25,685,723...25,752,953
Ensembl chr 9:25,686,439...25,752,900 		JBrowse link
G SRF serum response factor enables IEA Ensembl GO_REF:0000107 NCBI chr12:11,664,441...11,673,846
Ensembl chr12:11,664,527...11,671,533 		JBrowse link
G STAT3 signal transducer and activator of transcription 3 enables IEA Ensembl GO_REF:0000107 NCBI chr 9:20,539,660...20,614,631
Ensembl chr 9:20,539,697...20,612,672 		JBrowse link
G STING1 stimulator of interferon response cGAMP interactor 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 2:34,783,947...34,792,204
Ensembl chr 2:34,784,232...34,789,072 		JBrowse link
G STK4 serine/threonine kinase 4 enables IEA Ensembl GO_REF:0000107 NCBI chr24:32,375,630...32,463,848
Ensembl chr24:32,375,189...32,521,042 		JBrowse link
G TAF1 TATA-box binding protein associated factor 1 enables ISO (PMID:24289924) ParkinsonsUK-UCL PMID:24289924 NCBI chr  X:55,693,091...55,764,268
Ensembl chr  X:55,693,194...55,763,683 		JBrowse link
G TAL1 TAL bHLH transcription factor 1, erythroid differentiation factor enables IEA Ensembl GO_REF:0000107 NCBI chr15:13,446,752...13,462,038
Ensembl chr15:13,449,481...13,462,047 		JBrowse link
G TBK1 TANK binding kinase 1 enables IEA Ensembl GO_REF:0000107 NCBI chr10:7,169,664...7,208,890
Ensembl chr10:7,168,007...7,208,899 		JBrowse link
G TBP TATA-box binding protein enables IEA Ensembl GO_REF:0000107 NCBI chr12:72,458,959...72,479,271
Ensembl chr12:72,459,041...72,479,124 		JBrowse link
G TBX18 T-box transcription factor 18 enables ISO (PMID:17584735) BHF-UCL PMID:17584735 NCBI chr12:44,901,076...44,929,730
Ensembl chr12:44,873,119...44,929,205 		JBrowse link
G TBX20 T-box transcription factor 20 enables IEA Ensembl GO_REF:0000107 NCBI chr14:46,891,706...46,946,899
Ensembl chr14:46,896,228...46,947,507 		JBrowse link
G TBX3 T-box transcription factor 3 enables IEA Ensembl GO_REF:0000107 NCBI chr26:11,694,885...11,709,594
Ensembl chr26:11,696,565...11,708,918 		JBrowse link
G TBX5 T-box transcription factor 5 enables IEA Ensembl GO_REF:0000107 NCBI chr26:11,462,541...11,549,699
Ensembl chr26:11,463,653...11,506,446 		JBrowse link
G TBX6 T-box transcription factor 6 enables IEA Ensembl GO_REF:0000107 NCBI chr 6:18,093,201...18,098,592
Ensembl chr 6:18,093,189...18,097,636 		JBrowse link
G TBXT T-box transcription factor T enables IEA Ensembl GO_REF:0000107 NCBI chr 1:54,183,495...54,192,331
Ensembl chr 1:54,183,153...54,192,352 		JBrowse link
G TCERG1 transcription elongation regulator 1 enables ISO (PMID:20956529) BHF-UCL PMID:20956529 NCBI chr 2:40,855,973...40,920,242
Ensembl chr 2:40,856,045...40,919,571 		JBrowse link
G TCF23 transcription factor 23 enables IEA Ensembl GO_REF:0000107 NCBI chr17:21,139,408...21,145,014
Ensembl chr17:21,140,794...21,144,053 		JBrowse link
G TCF3 transcription factor 3 enables IEA Ensembl GO_REF:0000107 NCBI chr20:57,255,091...57,284,223
Ensembl chr20:57,254,384...57,283,981 		JBrowse link
G TCF7L2 transcription factor 7 like 2 enables IEA Ensembl GO_REF:0000107 NCBI chr28:23,966,079...24,162,775
Ensembl chr28:23,966,073...24,163,737 		JBrowse link
G TEAD3 TEA domain transcription factor 3 enables IEA Ensembl GO_REF:0000107 NCBI chr12:4,610,663...4,627,817
Ensembl chr12:4,611,144...4,632,888 		JBrowse link
G TEDC1 tubulin epsilon and delta complex 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 8:72,787,754...72,795,593
Ensembl chr 8:72,788,592...72,795,326 		JBrowse link
G TOX2 TOX high mobility group box family member 2 ISO RGD PMID:14764631 RGD:1302820 NCBI chr24:31,523,323...31,656,361
Ensembl chr24:31,522,798...31,656,373 		JBrowse link
G TP53 tumor protein p53 enables IEA Ensembl GO_REF:0000107 NCBI chr 5:32,561,406...32,565,149
Ensembl chr 5:32,560,598...32,574,109 		JBrowse link
G TP53BP1 tumor protein p53 binding protein 1 enables IEA Ensembl GO_REF:0000107 NCBI chr30:10,263,650...10,362,646
Ensembl chr30:10,263,650...10,336,134 		JBrowse link
G TP73 tumor protein p73 enables ISO (PMID:18421303) ARUK-UCL PMID:18421303 NCBI chr 5:58,194,385...58,241,159
Ensembl chr 5:58,187,826...58,240,839 		JBrowse link
G TRIB1 tribbles pseudokinase 1 enables ISO (PMID:17724128) BHF-UCL PMID:17724128 NCBI chr13:23,337,788...23,346,304
Ensembl chr13:23,337,788...23,346,304 		JBrowse link
G TRIB2 tribbles pseudokinase 2 enables IEA Ensembl GO_REF:0000107 NCBI chr17:9,225,598...9,251,826
Ensembl chr17:9,226,017...9,249,821 		JBrowse link
G TTC8 tetratricopeptide repeat domain 8 enables IEA Ensembl GO_REF:0000107 NCBI chr 8:60,061,670...60,115,464
Ensembl chr 8:60,061,732...60,115,075 		JBrowse link
G UBXN7 UBX domain protein 7 enables ISO (PMID:18775313) BHF-UCL PMID:18775313 NCBI chr33:29,454,233...29,511,753
Ensembl chr33:29,457,337...29,511,703 		JBrowse link
G UHRF2 ubiquitin like with PHD and ring finger domains 2 enables IEA Ensembl GO_REF:0000107 NCBI chr11:27,406,275...27,474,971
Ensembl chr11:27,405,977...27,623,005 		JBrowse link
G WWP2 WW domain containing E3 ubiquitin protein ligase 2 enables IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:79,806,424...79,926,846
Ensembl chr 5:79,806,425...79,957,830 		JBrowse link
G XPC XPC complex subunit, DNA damage recognition and repair factor enables IEA Ensembl GO_REF:0000107 NCBI chr20:4,299,644...4,328,826
Ensembl chr20:4,300,386...4,328,768 		JBrowse link
G ZBTB8A zinc finger and BTB domain containing 8A enables IEA Ensembl GO_REF:0000107 NCBI chr 2:68,694,874...68,762,548
Ensembl chr 2:68,698,642...68,761,466 		JBrowse link
G ZC3H7B zinc finger CCCH-type containing 7B enables ISO PMID:10362258
(PMID:18605988)		 ARUK-UCL
MGI		 PMID:10362258 PMID:18605988 RGD:13506263 NCBI chr10:23,882,379...23,944,850
Ensembl chr10:23,884,981...23,920,131 		JBrowse link
G ZFPM1 zinc finger protein, FOG family member 1 enables IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr 5:64,812,353...64,863,278 JBrowse link
G ZFPM2 zinc finger protein, FOG family member 2 enables IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr13:6,435,368...6,796,903
Ensembl chr13:6,336,794...6,796,322 		JBrowse link
aryl hydrocarbon receptor binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AHR aryl hydrocarbon receptor enables ISO (PMID:24001774) UniProt PMID:24001774 NCBI chr14:31,743,704...31,793,484
Ensembl chr14:31,686,170...31,791,444 		JBrowse link
G AIP aryl hydrocarbon receptor interacting protein enables IEA Ensembl GO_REF:0000107 NCBI chr18:49,986,582...49,992,756
Ensembl chr18:49,986,587...49,992,676 		JBrowse link
G ARNT aryl hydrocarbon receptor nuclear translocator enables IEA Ensembl GO_REF:0000107 Ensembl chr17:59,941,353...60,010,867
Ensembl chr17:59,941,353...60,010,867 		JBrowse link
G ARNT2 aryl hydrocarbon receptor nuclear translocator 2 enables IEA Ensembl GO_REF:0000107 NCBI chr 3:57,005,106...57,139,585
Ensembl chr 3:57,008,570...57,159,713 		JBrowse link
G ARNTL aryl hydrocarbon receptor nuclear translocator like enables IEA Ensembl GO_REF:0000107 NCBI chr21:36,254,235...36,323,915
Ensembl chr21:36,290,070...36,323,622 		JBrowse link
G NCOA2 nuclear receptor coactivator 2 enables IEA Ensembl GO_REF:0000107 NCBI chr29:19,253,849...19,471,640
Ensembl chr29:19,222,842...19,545,371 		JBrowse link
G TAF4 TATA-box binding protein associated factor 4 enables IEA Ensembl GO_REF:0000107 NCBI chr24:46,076,744...46,107,371
Ensembl chr24:46,077,578...46,143,828 		JBrowse link
G TAF6 TATA-box binding protein associated factor 6 enables IEA Ensembl GO_REF:0000107 NCBI chr 6:9,475,132...9,488,611
Ensembl chr 6:9,479,884...9,488,561 		JBrowse link
G TBP TATA-box binding protein enables IEA Ensembl GO_REF:0000107 NCBI chr12:72,458,959...72,479,271
Ensembl chr12:72,459,041...72,479,124 		JBrowse link
NF-kappaB binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKAP8 A-kinase anchoring protein 8 enables IEA Ensembl GO_REF:0000107 NCBI chr20:46,800,917...46,817,397
Ensembl chr20:46,800,872...46,817,397 		JBrowse link
G ANKRD42 ankyrin repeat domain 42 enables IBA GO_Central GO_REF:0000033 NCBI chr21:15,920,322...15,998,439
Ensembl chr21:15,920,661...15,997,611 		JBrowse link
G ANXA4 annexin A4 enables IEA Ensembl GO_REF:0000107 NCBI chr10:68,418,678...68,466,181
Ensembl chr10:68,431,056...68,466,174 		JBrowse link
G APEX1 apurinic/apyrimidinic endodeoxyribonuclease 1 ISO RGD PMID:17602955 RGD:2315672 NCBI chr15:17,786,808...17,789,422
Ensembl chr15:17,786,357...17,789,422 		JBrowse link
G BCL10 BCL10 immune signaling adaptor enables IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:62,712,937...62,723,852
Ensembl chr 6:62,712,971...62,722,368 		JBrowse link
G BRMS1 BRMS1 transcriptional repressor and anoikis regulator enables ISO (PMID:17000776) UniProt PMID:17000776 NCBI chr18:50,967,175...50,974,816
Ensembl chr18:50,967,270...50,974,321 		JBrowse link
G CDK5RAP3 CDK5 regulatory subunit associated protein 3 enables IEA Ensembl GO_REF:0000107 NCBI chr 9:24,276,660...24,286,273
Ensembl chr 9:24,276,768...24,286,272 		JBrowse link
G CDKN2A cyclin dependent kinase inhibitor 2A enables ISO (PMID:10353611) BHF-UCL PMID:10353611 NCBI chr11:41,223,316...41,226,056
Ensembl chr11:41,223,315...41,264,379 		JBrowse link
G COMMD6 COMM domain containing 6 enables IBA GO_Central GO_REF:0000033 NCBI chr22:29,318,216...29,336,032
Ensembl chr22:29,318,231...29,336,062 		JBrowse link
G COMMD7 COMM domain containing 7 enables IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr24:22,035,590...22,057,799
Ensembl chr24:22,035,990...22,079,583 		JBrowse link
G COMMD8 COMM domain containing 8 enables IBA GO_Central GO_REF:0000033 NCBI chr13:43,368,541...43,383,174
Ensembl chr13:43,369,173...43,383,094 		JBrowse link
G CPNE1 copine 1 enables ISO (PMID:18212740) UniProt PMID:18212740 NCBI chr24:24,554,636...24,589,748
Ensembl chr24:24,554,636...24,589,731 		JBrowse link
G DNAJA3 DnaJ heat shock protein family (Hsp40) member A3 enables ISO (PMID:15601829) UniProt PMID:15601829 NCBI chr 6:36,921,941...36,967,718
Ensembl chr 6:36,917,858...36,967,689 		JBrowse link
G EP300 E1A binding protein p300 enables IEA Ensembl GO_REF:0000107 NCBI chr10:24,076,538...24,156,708
Ensembl chr10:24,077,971...24,156,396 		JBrowse link
G FAF1 Fas associated factor 1 enables IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr15:10,232,520...10,691,106
Ensembl chr15:10,232,614...10,690,741 		JBrowse link
G GSK3B glycogen synthase kinase 3 beta enables IEA Ensembl GO_REF:0000107 NCBI chr33:23,458,369...23,659,878
Ensembl chr33:23,463,767...23,659,666 		JBrowse link
G HDAC1 histone deacetylase 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 2:68,901,339...68,936,473
Ensembl chr 2:68,901,651...68,936,186 		JBrowse link
G HDAC2 histone deacetylase 2 enables IEA Ensembl GO_REF:0000107 NCBI chr12:70,053,822...70,083,491
Ensembl chr12:70,053,297...70,103,578 		JBrowse link
G HDAC3 histone deacetylase 3 enables IEA Ensembl GO_REF:0000107 NCBI chr 2:36,583,283...36,598,121
Ensembl chr 2:36,583,283...36,597,682 		JBrowse link
G HIF1AN hypoxia inducible factor 1 subunit alpha inhibitor enables IEA Ensembl GO_REF:0000107 NCBI chr28:13,253,646...13,277,997
Ensembl chr28:13,258,765...13,267,608 		JBrowse link
G HSP70 heat shock protein 70 ISO RGD PMID:16135962 RGD:1598788 NCBI chr12:1,285,282...1,287,670 JBrowse link
G MTDH metadherin enables IBA GO_Central GO_REF:0000033 NCBI chr29:41,675,601...41,732,389
Ensembl chr29:41,640,035...41,729,949 		JBrowse link
G NFKBIA NFKB inhibitor alpha enables ISO
IBA
IEA		 RGD
GO_Central
Ensembl		 PMID:16135962 GO_REF:0000033 GO_REF:0000107 RGD:1598788 NCBI chr 8:14,100,203...14,103,453
Ensembl chr 8:14,100,671...14,103,433 		JBrowse link
G NFKBID NFKB inhibitor delta enables ISO (PMID:11931770) MGI PMID:11931770 NCBI chr 1:116,763,371...116,770,683
Ensembl chr 1:116,757,289...116,772,325 		JBrowse link
G NOTCH2 notch receptor 2 enables IEA Ensembl GO_REF:0000107 NCBI chr17:56,854,825...57,020,157
Ensembl chr17:56,860,429...57,020,857 		JBrowse link
G NPM1 nucleophosmin 1 enables ISO (PMID:15087454) UniProt PMID:15087454 NCBI chr 4:40,756,464...40,770,174
Ensembl chr 4:40,756,465...40,770,175 		JBrowse link
G PDCD11 programmed cell death 11 enables IEA Ensembl GO_REF:0000107 NCBI chr28:15,767,936...15,812,285
Ensembl chr28:15,769,845...15,812,279 		JBrowse link
G PIAS3 protein inhibitor of activated STAT 3 enables ISO (PMID:15140884) UniProt PMID:15140884 NCBI chr17:58,650,791...58,660,755
Ensembl chr17:58,571,694...58,660,663 		JBrowse link
G PPARD peroxisome proliferator activated receptor delta ISO RGD PMID:15728586 RGD:1580656 NCBI chr12:4,492,867...4,579,340
Ensembl chr12:4,492,672...4,579,340 		JBrowse link
G PSMA6 proteasome 20S subunit alpha 6 enables IEA Ensembl GO_REF:0000107 NCBI chr 8:14,010,899...14,038,141
Ensembl chr 8:14,010,939...14,038,134 		JBrowse link
G RELA RELA proto-oncogene, NF-kB subunit enables IEA Ensembl GO_REF:0000107 NCBI chr18:51,550,003...51,558,861
Ensembl chr18:51,550,040...51,558,875 		JBrowse link
G RNF25 ring finger protein 25 enables IEA Ensembl GO_REF:0000107 NCBI chr37:25,266,945...25,273,269
Ensembl chr37:25,266,947...25,273,131 		JBrowse link
G SETD6 SET domain containing 6, protein lysine methyltransferase enables IEA Ensembl GO_REF:0000107 NCBI chr 2:58,138,739...58,142,909
Ensembl chr 2:58,139,100...58,143,147 		JBrowse link
G TAF4B TATA-box binding protein associated factor 4b enables IEA Ensembl GO_REF:0000107 NCBI chr 7:62,276,885...62,402,838
Ensembl chr 7:62,278,061...62,402,375 		JBrowse link
G TP53BP2 tumor protein p53 binding protein 2 enables IEA Ensembl GO_REF:0000107 NCBI chr 7:40,296,278...40,329,818
Ensembl chr 7:40,252,697...40,329,828 		JBrowse link
G ZC3H7B zinc finger CCCH-type containing 7B ISO RGD PMID:17252537 RGD:2312270 NCBI chr10:23,882,379...23,944,850
Ensembl chr10:23,884,981...23,920,131 		JBrowse link
NFAT protein binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXP3 forkhead box P3 enables IEA Ensembl GO_REF:0000107 NCBI chr  X:42,331,229...42,362,841
Ensembl chr  X:42,344,108...42,350,758 		JBrowse link
G GATA4 GATA binding protein 4 ISO RGD PMID:22198280 RGD:5687133 NCBI chr25:26,126,172...26,211,474
Ensembl chr25:26,127,853...26,182,989 		JBrowse link
G GATA6 GATA binding protein 6 enables IEA Ensembl GO_REF:0000107 NCBI chr 7:65,932,114...65,962,574 JBrowse link
G MAPK14 mitogen-activated protein kinase 14 enables IEA Ensembl GO_REF:0000107 NCBI chr12:5,145,647...5,221,558
Ensembl chr12:5,146,037...5,220,603 		JBrowse link
G PPARA peroxisome proliferator activated receptor alpha ISO RGD PMID:22198280 RGD:5687133 NCBI chr10:19,934,020...20,006,096
Ensembl chr10:19,934,165...20,006,146 		JBrowse link
G SPI1 Spi-1 proto-oncogene enables IEA Ensembl GO_REF:0000107 NCBI chr18:42,253,849...42,269,497
Ensembl chr18:42,253,811...42,269,727 		JBrowse link
nuclear androgen receptor binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AR androgen receptor ISO RGD PMID:9710597 RGD:69969 NCBI chr24:34,713,390...34,731,461
NCBI chr  X:51,969,785...52,167,450
Ensembl chr  X:51,969,785...52,151,912 		JBrowse link
G ARID5A AT-rich interaction domain 5A enables ISO (PMID:15941852) UniProt PMID:15941852 NCBI chr17:34,320,791...34,333,660
Ensembl chr17:34,321,177...34,333,621 		JBrowse link
G CALR calreticulin enables IEA Ensembl GO_REF:0000107 NCBI chr20:49,251,390...49,255,291
Ensembl chr20:49,251,777...49,255,245 		JBrowse link
G DAXX death domain associated protein enables ISO
IEA
IBA		 RGD
Ensembl
GO_Central		 PMID:15350595 GO_REF:0000033 GO_REF:0000107 RGD:1358129 NCBI chr12:2,755,960...2,760,687
Ensembl chr12:2,755,960...2,761,340 		JBrowse link
G DDX5 DEAD-box helicase 5 enables IEA Ensembl GO_REF:0000107 NCBI chr 9:12,300,706...12,307,931
Ensembl chr 9:12,300,708...12,307,663 		JBrowse link
G EP300 E1A binding protein p300 enables IEA Ensembl GO_REF:0000107 NCBI chr10:24,076,538...24,156,708
Ensembl chr10:24,077,971...24,156,396 		JBrowse link
G FOXH1 forkhead box H1 enables IEA Ensembl GO_REF:0000107 NCBI chr13:37,883,554...37,887,324
Ensembl chr13:37,882,687...37,885,319 		JBrowse link
G FOXP1 forkhead box P1 enables IEA Ensembl GO_REF:0000107 NCBI chr20:20,438,631...21,020,516
Ensembl chr20:20,788,433...21,016,397 		JBrowse link
G FOXP2 forkhead box P2 ISO RGD PMID:25247470 RGD:11536003 NCBI chr14:53,311,214...53,864,056
Ensembl chr14:53,312,045...53,862,655 		JBrowse link
G KDM1A lysine demethylase 1A enables IEA Ensembl GO_REF:0000107 NCBI chr 2:76,313,742...76,375,716
Ensembl chr 2:76,156,434...76,375,632 		JBrowse link
G KDM3A lysine demethylase 3A enables IEA Ensembl GO_REF:0000107 NCBI chr17:38,690,962...38,744,507
Ensembl chr17:38,690,979...38,743,739 		JBrowse link
G KDM4C lysine demethylase 4C enables IEA Ensembl GO_REF:0000107 NCBI chr11:27,662,764...28,101,432
Ensembl chr11:27,693,536...28,101,801 		JBrowse link
G NCOA3 nuclear receptor coactivator 3 ISO RGD PMID:17223690 RGD:5688284 Ensembl chr24:34,585,305...34,728,674
Ensembl chr24:34,585,305...34,728,674 		JBrowse link
G NSD1 nuclear receptor binding SET domain protein 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 4:36,058,351...36,214,254
Ensembl chr 4:36,063,134...36,210,999 		JBrowse link
G PARK7 Parkinsonism associated deglycase enables ISO (PMID:17510388) ParkinsonsUK-UCL PMID:17510388 NCBI chr 5:61,576,219...61,592,325
Ensembl chr 5:61,576,069...61,592,303 		JBrowse link
G PIAS2 protein inhibitor of activated STAT 2 enables ISO PMID:9920921 RGD
MGI		 PMID:9920921 PMID:11117529 RGD:2303126 RGD:70792 NCBI chr 7:44,436,100...44,583,657
Ensembl chr 7:44,454,095...44,583,657 		JBrowse link
G PKN1 protein kinase N1 enables IEA Ensembl GO_REF:0000107 NCBI chr20:48,160,480...48,184,346
Ensembl chr20:48,160,529...48,184,751 		JBrowse link
G PRKCB protein kinase C beta enables IEA Ensembl GO_REF:0000107 NCBI chr 6:21,742,970...22,064,360
Ensembl chr 6:21,742,973...22,065,185 		JBrowse link
G PRMT2 protein arginine methyltransferase 2 enables ISO (PMID:17587566) UniProt PMID:17587566 NCBI chr31:39,806,086...39,838,959
Ensembl chr31:39,807,593...39,838,972 		JBrowse link
G RNF14 ring finger protein 14 enables IEA Ensembl GO_REF:0000107 NCBI chr 2:36,908,617...36,934,896
Ensembl chr 2:36,911,612...36,929,172 		JBrowse link
G RNF4 ring finger protein 4 ISO RGD PMID:9710597 RGD:69969 NCBI chr 3:61,721,752...61,759,797
Ensembl chr 3:61,723,124...61,759,730 		JBrowse link
G RNF6 ring finger protein 6 enables IEA Ensembl GO_REF:0000107 NCBI chr25:13,199,201...13,240,347
Ensembl chr25:13,199,397...13,207,497 		JBrowse link
G SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 enables IEA Ensembl GO_REF:0000107 NCBI chr20:50,175,489...50,268,865
Ensembl chr20:50,175,687...50,268,836 		JBrowse link
G SNW1 SNW domain containing 1 enables ISO (PMID:23566155) CAFA PMID:23566155 NCBI chr 8:50,478,924...50,512,360
Ensembl chr 8:50,479,338...50,512,243 		JBrowse link
G SRA1 steroid receptor RNA activator 1 ISO RGD PMID:12350225 RGD:628587 NCBI chr 2:35,745,518...35,752,497
Ensembl chr 2:35,745,877...35,752,502 		JBrowse link
G TCF21 transcription factor 21 enables IEA Ensembl GO_REF:0000107 NCBI chr 1:26,856,281...26,859,654
Ensembl chr 1:26,856,587...26,859,647 		JBrowse link
G TGFB1I1 transforming growth factor beta 1 induced transcript 1 enables ISO (PMID:10075738) UniProt PMID:10075738 NCBI chr 6:16,775,438...16,781,695
Ensembl chr 6:16,775,836...16,780,935 		JBrowse link
G TMF1 TATA element modulatory factor 1 enables IEA Ensembl GO_REF:0000107 NCBI chr20:22,684,150...22,716,107
Ensembl chr20:22,684,159...22,714,432 		JBrowse link
G TRIM68 tripartite motif containing 68 enables IEA Ensembl GO_REF:0000107 NCBI chr21:26,982,173...26,992,162
Ensembl chr21:26,982,876...26,989,144 		JBrowse link
G WIPI1 WD repeat domain, phosphoinositide interacting 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 9:15,115,098...15,147,893
Ensembl chr 9:15,115,315...15,149,147 		JBrowse link
G ZBTB7A zinc finger and BTB domain containing 7A enables IEA Ensembl GO_REF:0000107 NCBI chr20:55,517,531...55,527,071
Ensembl chr20:55,505,916...55,523,736 		JBrowse link
nuclear estrogen receptor binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARID5A AT-rich interaction domain 5A enables ISO (PMID:15941852) UniProt PMID:15941852 NCBI chr17:34,320,791...34,333,660
Ensembl chr17:34,321,177...34,333,621 		JBrowse link
G ARRB1 arrestin beta 1 ISO RGD PMID:19339617 RGD:5509970 NCBI chr21:23,261,020...23,304,448
Ensembl chr21:23,235,711...23,297,786 		JBrowse link
G CCDC62 coiled-coil domain containing 62 enables IEA Ensembl GO_REF:0000107 NCBI chr26:6,655,819...6,697,283
Ensembl chr26:6,655,700...6,697,115 		JBrowse link
G CNOT1 CCR4-NOT transcription complex subunit 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 2:58,038,456...58,138,364
Ensembl chr 2:58,038,483...58,137,622 		JBrowse link
G CTNNB1 catenin beta 1 enables IEA Ensembl GO_REF:0000107 NCBI chr23:10,559,722...10,572,933
Ensembl chr23:10,559,718...10,572,927 		JBrowse link
G DCAF1 DDB1 and CUL4 associated factor 1 enables IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr20:38,109,974...38,187,621
Ensembl chr20:38,125,078...38,187,107 		JBrowse link
G DCAF13 DDB1 and CUL4 associated factor 13 enables IEA Ensembl GO_REF:0000107 NCBI chr13:4,835,147...4,860,706
Ensembl chr13:4,834,958...4,860,247 		JBrowse link
G DDX54 DEAD-box helicase 54 enables IEA Ensembl GO_REF:0000107 NCBI chr26:10,562,773...10,568,631
Ensembl chr26:10,550,019...10,568,763 		JBrowse link
G DNAAF4 dynein axonemal assembly factor 4 enables IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr30:20,778,497...20,871,304
Ensembl chr30:20,815,775...20,871,220 		JBrowse link
G DNMT1 DNA methyltransferase 1 ISO RGD PMID:19683557 RGD:8694315 NCBI chr20:50,872,213...50,928,352
Ensembl chr20:50,879,527...50,928,029 		JBrowse link
G ESR1 estrogen receptor 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 1:42,081,952...42,368,544
Ensembl chr 1:42,081,969...42,368,544 		JBrowse link
G FOXL2 forkhead box L2 enables ISO (PMID:19797124), (PMID:20005806) UniProt PMID:19797124 PMID:20005806 NCBI chr23:35,145,856...35,147,185 JBrowse link
G FUS FUS RNA binding protein ISO RGD PMID:9440806 RGD:9685715 NCBI chr 6:17,059,904...17,071,227
Ensembl chr 6:17,060,061...17,071,178 		JBrowse link
G GRM1 glutamate metabotropic receptor 1 ISO RGD PMID:18948402 RGD:4892069 NCBI chr 1:37,205,817...37,600,048
Ensembl chr 1:37,206,542...37,598,134 		JBrowse link
G HSD17B10 hydroxysteroid 17-beta dehydrogenase 10 ISO RGD PMID:19422801 RGD:4890964 NCBI chr  X:45,165,272...45,167,683
Ensembl chr  X:45,165,272...45,167,574 		JBrowse link
G ISL1 ISL LIM homeobox 1 enables ISO PMID:11043578 BHF-UCL
RGD		 PMID:11043578 RGD:8554127 NCBI chr 4:63,638,009...63,648,492
Ensembl chr 4:63,637,443...63,648,183 		JBrowse link
G LATS1 large tumor suppressor kinase 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 1:40,430,096...40,475,193
Ensembl chr 1:40,260,064...40,457,609 		JBrowse link
G LCOR ligand dependent nuclear receptor corepressor enables IEA Ensembl GO_REF:0000107 NCBI chr28:10,192,587...10,337,556
Ensembl chr28:10,193,748...10,335,626 		JBrowse link
G LEF1 lymphoid enhancer binding factor 1 enables IEA Ensembl GO_REF:0000107 NCBI chr32:28,516,002...28,633,759
Ensembl chr32:28,517,108...28,634,019 		JBrowse link
G MED1 mediator complex subunit 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 9:22,989,257...23,019,350
Ensembl chr 9:22,989,301...23,019,349 		JBrowse link
G MMS19 MMS19 homolog, cytosolic iron-sulfur assembly component enables IEA Ensembl GO_REF:0000107 NCBI chr28:10,749,327...10,783,846
Ensembl chr28:10,749,325...10,783,805 		JBrowse link
G NCOA1 nuclear receptor coactivator 1 enables ISO
IEA		 RGD
Ensembl		 PMID:19460436 GO_REF:0000107 RGD:5688174 NCBI chr17:18,880,676...19,124,300
Ensembl chr17:18,880,383...19,122,258 		JBrowse link
G NCOA2 nuclear receptor coactivator 2 ISO RGD PMID:20678994 RGD:5688148 NCBI chr29:19,253,849...19,471,640
Ensembl chr29:19,222,842...19,545,371 		JBrowse link
G NCOA3 nuclear receptor coactivator 3 ISO RGD PMID:11818503 RGD:634396 Ensembl chr24:34,585,305...34,728,674
Ensembl chr24:34,585,305...34,728,674 		JBrowse link
G NCOA6 nuclear receptor coactivator 6 ISO RGD PMID:10866662 RGD:633378 NCBI chr24:23,802,360...23,877,986
Ensembl chr24:23,802,351...23,866,792 		JBrowse link
G NCOR1 nuclear receptor corepressor 1 ISO RGD PMID:19460436 RGD:5688174 NCBI chr 5:39,687,530...39,837,003
Ensembl chr 5:39,687,543...39,836,464 		JBrowse link
G NKX3-1 NK3 homeobox 1 enables IEA Ensembl GO_REF:0000107 NCBI chr25:33,815,343...33,817,465
Ensembl chr25:33,815,095...33,817,474 		JBrowse link
G NRIP1 nuclear receptor interacting protein 1 enables ISO (PMID:7641693) RGD
UniProt		 PMID:7641693 PMID:19460436 RGD:5688174 NCBI chr31:11,852,330...11,951,735
Ensembl chr31:11,855,338...11,932,056 		JBrowse link
G NSD1 nuclear receptor binding SET domain protein 1 enables ISO (PMID:9628876) UniProt PMID:9628876 NCBI chr 4:36,058,351...36,214,254
Ensembl chr 4:36,063,134...36,210,999 		JBrowse link
G PADI2 peptidyl arginine deiminase 2 enables IEA Ensembl GO_REF:0000107 NCBI chr 2:81,116,031...81,147,889
Ensembl chr 2:81,116,140...81,145,043 		JBrowse link
G PAGR1 PAXIP1 associated glutamate rich protein 1 enables IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:17,876,740...17,879,546 JBrowse link
G PARP1 poly(ADP-ribose) polymerase 1 ISO RGD PMID:23493398 RGD:10413906 NCBI chr 7:38,503,072...38,542,556
Ensembl chr 7:38,503,067...38,542,127 		JBrowse link
G PCNA proliferating cell nuclear antigen ISO RGD PMID:19683557 RGD:8694315 NCBI chr24:16,478,774...16,485,992
Ensembl chr24:16,478,769...16,484,992 		JBrowse link
G PIAS2 protein inhibitor of activated STAT 2 ISO RGD PMID:11117529 RGD:2303126 NCBI chr 7:44,436,100...44,583,657
Ensembl chr 7:44,454,095...44,583,657 		JBrowse link
G PIK3R1 phosphoinositide-3-kinase regulatory subunit 1 ISO RGD PMID:16971528 RGD:1625219 NCBI chr 2:53,447,802...53,527,563
Ensembl chr 2:53,448,286...53,524,970 		JBrowse link
G PPARG peroxisome proliferator activated receptor gamma ISO RGD PMID:20689342 RGD:8553035 NCBI chr20:6,134,618...6,265,481
Ensembl chr20:6,050,357...6,207,981 		JBrowse link
G PPARGC1A PPARG coactivator 1 alpha ISO RGD PMID:18511507 RGD:4781450 NCBI chr 3:85,645,942...86,284,570
Ensembl chr 3:86,016,140...86,281,269 		JBrowse link
G PPARGC1B PPARG coactivator 1 beta enables IEA Ensembl GO_REF:0000107 NCBI chr 4:59,167,041...59,278,977
Ensembl chr 4:59,174,604...59,279,464 		JBrowse link
G PRMT2 protein arginine methyltransferase 2 enables ISO (PMID:17587566)
(PMID:12039952)		 UniProt PMID:12039952 PMID:17587566 NCBI chr31:39,806,086...39,838,959
Ensembl chr31:39,807,593...39,838,972 		JBrowse link
G PSMC3IP PSMC3 interacting protein ISO RGD PMID:11739747 RGD:628392 NCBI chr 9:20,386,635...20,391,293
Ensembl chr 9:20,386,758...20,390,701 		JBrowse link
G RNF4 ring finger protein 4 ISO RGD PMID:9710597 RGD:69969 NCBI chr 3:61,721,752...61,759,797
Ensembl chr 3:61,723,124...61,759,730 		JBrowse link
G SRARP steroid receptor associated and regulated protein enables IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:81,639,051...81,641,161
Ensembl chr 2:81,639,055...81,641,467 		JBrowse link
G SRC SRC proto-oncogene, non-receptor tyrosine kinase ISO RGD PMID:14751567 RGD:1581138 NCBI chr24:25,982,499...26,019,748
Ensembl chr24:25,999,048...26,018,077 		JBrowse link
G STRN striatin enables IEA Ensembl GO_REF:0000107 NCBI chr17:29,264,693...29,364,273
Ensembl chr17:29,272,833...29,332,869 		JBrowse link
G TACC1 transforming acidic coiled-coil containing protein 1 enables IEA Ensembl GO_REF:0000107 NCBI chr16:26,677,717...26,797,236
Ensembl chr16:26,682,327...26,797,937 		JBrowse link
G TAF10 TATA-box binding protein associated factor 10 enables IEA Ensembl GO_REF:0000107 NCBI chr21:29,917,941...29,919,347
Ensembl chr21:29,917,947...29,919,330 		JBrowse link
G TRIP4 thyroid hormone receptor interactor 4 enables IEA Ensembl GO_REF:0000107 NCBI chr30:28,851,314...28,908,991
Ensembl chr30:28,851,374...28,908,940 		JBrowse link
G WBP2 WW domain binding protein 2 enables IEA Ensembl GO_REF:0000107 NCBI chr 9:4,743,476...4,752,301
Ensembl chr 9:4,743,539...4,752,270 		JBrowse link
G WIPI1 WD repeat domain, phosphoinositide interacting 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 9:15,115,098...15,147,893
Ensembl chr 9:15,115,315...15,149,147 		JBrowse link
G ZNF366 zinc finger protein 366 enables IEA Ensembl GO_REF:0000107 NCBI chr 2:55,455,419...55,511,302
Ensembl chr 2:55,458,702...55,526,228 		JBrowse link
nuclear glucocorticoid receptor binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CEBPB CCAAT enhancer binding protein beta ISO RGD PMID:20155810 RGD:4892121 NCBI chr24:36,661,294...36,663,162
Ensembl chr24:36,661,616...36,662,656 		JBrowse link
G ETS2 ETS proto-oncogene 2, transcription factor ISO RGD PMID:11279115 RGD:1300077 NCBI chr31:33,846,821...33,861,394
Ensembl chr31:33,839,010...33,860,330 		JBrowse link
G FKBP4 FKBP prolyl isomerase 4 enables ISO (PMID:7693550), (PMID:8341706) MGI PMID:7693550 PMID:8341706 NCBI chr27:41,950,087...41,959,136
Ensembl chr27:41,950,509...41,959,034 		JBrowse link
G FLT3 fms related receptor tyrosine kinase 3 ISO RGD PMID:18261979 RGD:2302206 NCBI chr25:11,551,372...11,670,891
Ensembl chr25:11,581,206...11,692,284 		JBrowse link
G IPO13 importin 13 ISO RGD PMID:16809634 RGD:4892097 NCBI chr15:16,293,293...16,313,841
Ensembl chr15:16,293,293...16,313,571 		JBrowse link
G NCOA2 nuclear receptor coactivator 2 ISO RGD PMID:9742117 RGD:633360 NCBI chr29:19,253,849...19,471,640
Ensembl chr29:19,222,842...19,545,371 		JBrowse link
G NCOA6 nuclear receptor coactivator 6 ISO RGD PMID:10866662 RGD:633378 NCBI chr24:23,802,360...23,877,986
Ensembl chr24:23,802,351...23,866,792 		JBrowse link
G NCOR2 nuclear receptor corepressor 2 ISO RGD PMID:15870285 RGD:5688307 NCBI chr26:5,352,670...5,493,741
Ensembl chr26:5,331,459...5,493,830 		JBrowse link
G NR4A1 nuclear receptor subfamily 4 group A member 1 enables IBA GO_Central GO_REF:0000033 NCBI chr27:2,947,729...2,965,045
Ensembl chr27:2,891,053...2,955,655 		JBrowse link
G NR4A2 nuclear receptor subfamily 4 group A member 2 enables IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr36:2,546,237...2,554,559
Ensembl chr36:2,547,421...2,552,780 		JBrowse link
G NR4A3 nuclear receptor subfamily 4 group A member 3 enables IBA GO_Central GO_REF:0000033 NCBI chr11:56,806,506...56,846,997
Ensembl chr11:56,812,804...56,847,689 		JBrowse link
G NRIP1 nuclear receptor interacting protein 1 enables ISO (PMID:10364267), (PMID:11266503), (PMID:12773562) UniProt PMID:10364267 PMID:11266503 PMID:12773562 NCBI chr31:11,852,330...11,951,735
Ensembl chr31:11,855,338...11,932,056 		JBrowse link
G PIAS2 protein inhibitor of activated STAT 2 ISO RGD PMID:11117529 RGD:2303126 NCBI chr 7:44,436,100...44,583,657
Ensembl chr 7:44,454,095...44,583,657 		JBrowse link
G PSMC3IP PSMC3 interacting protein ISO RGD PMID:11739747 RGD:628392 NCBI chr 9:20,386,635...20,391,293
Ensembl chr 9:20,386,758...20,390,701 		JBrowse link
G RARA retinoic acid receptor alpha enables IBA GO_Central GO_REF:0000033 NCBI chr 9:22,254,803...22,298,614
Ensembl chr 9:22,254,806...22,289,459 		JBrowse link
G RARB retinoic acid receptor beta enables IBA GO_Central GO_REF:0000033 NCBI chr23:18,207,253...18,931,128
Ensembl chr23:18,207,760...18,482,652 		JBrowse link
G RARG retinoic acid receptor gamma enables IBA GO_Central GO_REF:0000033 NCBI chr27:1,958,432...1,978,471
Ensembl chr27:1,958,204...1,978,476 		JBrowse link
G SMAD3 SMAD family member 3 enables IEA Ensembl GO_REF:0000107 NCBI chr30:31,246,313...31,360,098
Ensembl chr30:31,245,657...31,363,337 		JBrowse link
G STAT3 signal transducer and activator of transcription 3 ISO RGD PMID:20155810 RGD:4892121 NCBI chr 9:20,539,660...20,614,631
Ensembl chr 9:20,539,697...20,612,672 		JBrowse link
G STAT5B signal transducer and activator of transcription 5B enables IEA Ensembl GO_REF:0000107 NCBI chr 9:20,647,712...20,718,453
Ensembl chr 9:20,691,483...20,716,485 		JBrowse link
G TACC1 transforming acidic coiled-coil containing protein 1 enables IEA Ensembl GO_REF:0000107 NCBI chr16:26,677,717...26,797,236
Ensembl chr16:26,682,327...26,797,937 		JBrowse link
G YWHAH tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein eta enables ISO (PMID:9079630) UniProt PMID:9079630 NCBI chr26:24,785,374...24,796,603
Ensembl chr26:24,785,368...24,795,778 		JBrowse link
G ZC3H7B zinc finger CCCH-type containing 7B ISO RGD PMID:17884810 RGD:2312268 NCBI chr10:23,882,379...23,944,850
Ensembl chr10:23,884,981...23,920,131 		JBrowse link
nuclear mineralocorticoid receptor binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SMAD3 SMAD family member 3 enables IEA Ensembl GO_REF:0000107 NCBI chr30:31,246,313...31,360,098
Ensembl chr30:31,245,657...31,363,337 		JBrowse link
nuclear progesterone receptor binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PRMT2 protein arginine methyltransferase 2 enables ISO (PMID:12039952) UniProt PMID:12039952 NCBI chr31:39,806,086...39,838,959
Ensembl chr31:39,807,593...39,838,972 		JBrowse link
G TRERF1 transcriptional regulating factor 1 enables ISO (PMID:17015480) ARUK-UCL PMID:17015480 NCBI chr12:10,838,887...11,047,017
Ensembl chr12:10,842,059...10,962,677 		JBrowse link
nuclear receptor binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTN4 actinin alpha 4 enables IEA Ensembl GO_REF:0000107 NCBI chr 1:114,354,993...114,427,997
Ensembl chr 1:114,309,693...114,427,991 		JBrowse link
G ARID1A AT-rich interaction domain 1A enables IEA Ensembl GO_REF:0000107 NCBI chr 2:73,331,606...73,401,151
Ensembl chr 2:73,324,852...73,401,102 		JBrowse link
G ASAH1 N-acylsphingosine amidohydrolase 1 enables ISO (PMID:22927646) UniProt PMID:22927646 NCBI chr16:41,297,215...41,335,521
Ensembl chr16:41,297,809...41,323,078 		JBrowse link
G BCAS3 BCAS3 microtubule associated cell migration factor enables IEA Ensembl GO_REF:0000107 NCBI chr 9:35,253,617...35,845,206
Ensembl chr 9:35,253,917...35,843,328 		JBrowse link
G BUD31 BUD31 homolog enables ISO (PMID:25091737) UniProt PMID:25091737 NCBI chr 6:10,169,422...10,178,231 JBrowse link
G C1D C1D nuclear receptor corepressor enables IEA Ensembl GO_REF:0000107 NCBI chr10:67,160,168...67,165,737
Ensembl chr10:67,161,469...67,165,741 		JBrowse link
G CRX cone-rod homeobox enables ISS UniProt GO_REF:0000024 NCBI chr 1:108,249,911...108,261,015
Ensembl chr 1:108,249,911...108,261,010 		JBrowse link
G CRY1 cryptochrome circadian regulator 1 enables IEA Ensembl GO_REF:0000107 NCBI chr10:31,681,098...31,792,995
Ensembl chr10:31,681,288...31,780,306 		JBrowse link
G CRY2 cryptochrome circadian regulator 2 enables IEA Ensembl GO_REF:0000107 NCBI chr18:43,538,335...43,573,651
Ensembl chr18:43,539,612...43,573,875 		JBrowse link
G CTNNB1 catenin beta 1 enables IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr23:10,559,722...10,572,933
Ensembl chr23:10,559,718...10,572,927 		JBrowse link
G EP300 E1A binding protein p300 enables IEA Ensembl GO_REF:0000107 NCBI chr10:24,076,538...24,156,708
Ensembl chr10:24,077,971...24,156,396 		JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha enables IEA Ensembl GO_REF:0000107 NCBI chr 8:36,614,045...36,656,692
Ensembl chr 8:36,614,045...36,656,692 		JBrowse link
G ISL1 ISL LIM homeobox 1 enables ISO PMID:11043578 BHF-UCL PMID:11043578 RGD:8554127 NCBI chr 4:63,638,009...63,648,492
Ensembl chr 4:63,637,443...63,648,183 		JBrowse link
G JUND JunD proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:15860571 RGD:1600916 NCBI chr20:44,737,021...44,738,932
Ensembl chr20:44,736,832...44,763,020 		JBrowse link
G JUP junction plakoglobin enables IBA GO_Central GO_REF:0000033 NCBI chr 9:21,028,773...21,053,071
Ensembl chr 9:21,028,828...21,053,071 		JBrowse link
G LGALS7B galectin 7B enables IEA Ensembl GO_REF:0000107
G LOC100686721 galectin-7 enables IEA Ensembl GO_REF:0000107 NCBI chr 1:114,322,087...114,324,314
Ensembl chr 1:114,309,693...114,427,991 		JBrowse link
G LRP2 LDL receptor related protein 2 enables ISO PMID:16143106 UniProt PMID:16143106 RGD:13210563 NCBI chr36:13,910,450...14,107,081
Ensembl chr36:13,911,865...14,107,546 		JBrowse link
G MED1 mediator complex subunit 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 9:22,989,257...23,019,350
Ensembl chr 9:22,989,301...23,019,349 		JBrowse link
G MYOD1 myogenic differentiation 1 enables IEA Ensembl GO_REF:0000107 NCBI chr21:40,257,792...40,260,461
Ensembl chr21:40,258,027...40,259,712 		JBrowse link
G NCOA1 nuclear receptor coactivator 1 enables ISO
IBA
IEA		 Pgr-A and Pgr-B RGD
GO_Central
Ensembl
UniProt
InterPro		 PMID:18566116 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 RGD:5688220 NCBI chr17:18,880,676...19,124,300
Ensembl chr17:18,880,383...19,122,258 		JBrowse link
G NCOA2 nuclear receptor coactivator 2 enables ISO
IBA
IEA		 Pgr-B RGD
GO_Central
InterPro
UniProt
Ensembl		 PMID:9742117 PMID:20678994 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 RGD:5688148 RGD:633360 NCBI chr29:19,253,849...19,471,640
Ensembl chr29:19,222,842...19,545,371 		JBrowse link
G NCOA3 nuclear receptor coactivator 3 enables IEA
IBA		 InterPro
GO_Central
Ensembl
UniProt		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 Ensembl chr24:34,585,305...34,728,674
Ensembl chr24:34,585,305...34,728,674 		JBrowse link
G NCOA7 nuclear receptor coactivator 7 enables IEA Ensembl GO_REF:0000107 NCBI chr 1:64,664,290...64,812,790
Ensembl chr 1:64,664,571...64,815,219 		JBrowse link
G NCOR1 nuclear receptor corepressor 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 5:39,687,530...39,837,003
Ensembl chr 5:39,687,543...39,836,464 		JBrowse link
G NCOR2 nuclear receptor corepressor 2 ISO RGD PMID:15870285 RGD:5688307 NCBI chr26:5,352,670...5,493,741
Ensembl chr26:5,331,459...5,493,830 		JBrowse link
G NR0B1 nuclear receptor subfamily 0 group B member 1 enables ISO (PMID:11875111) UniProt PMID:11875111 NCBI chr  X:25,396,527...25,401,587
Ensembl chr  X:25,396,527...25,401,715 		JBrowse link
G NR1I2 nuclear receptor subfamily 1 group I member 2 enables IEA Ensembl GO_REF:0000107 NCBI chr33:23,444,367...23,456,405
Ensembl chr33:23,432,690...23,455,347 		JBrowse link
G NRBF2 nuclear receptor binding factor 2 ISO RGD PMID:10786636 RGD:61677 NCBI chr 4:14,958,142...14,991,146
Ensembl chr 4:14,958,226...14,990,325 		JBrowse link
G NRIP1 nuclear receptor interacting protein 1 enables ISO (PMID:11518808) UniProt PMID:11518808 NCBI chr31:11,852,330...11,951,735
Ensembl chr31:11,855,338...11,932,056 		JBrowse link
G PER2 period circadian regulator 2 enables ISO (PMID:22170608)
(PMID:20159955)		 UniProt PMID:20159955 PMID:22170608 NCBI chr25:48,716,499...48,761,617
Ensembl chr25:48,717,173...48,758,755 		JBrowse link
G PPARGC1A PPARG coactivator 1 alpha enables IEA Ensembl GO_REF:0000107 NCBI chr 3:85,645,942...86,284,570
Ensembl chr 3:86,016,140...86,281,269 		JBrowse link
G PROX1 prospero homeobox 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 7:11,996,282...12,047,693
Ensembl chr 7:11,996,703...12,044,036 		JBrowse link
G SIRT1 sirtuin 1 enables ISO (PMID:24043310) UniProt PMID:24043310 NCBI chr 4:19,188,616...19,220,031
Ensembl chr 4:19,188,675...19,218,279 		JBrowse link
G SLC30A9 solute carrier family 30 member 9 enables IEA Ensembl GO_REF:0000107 NCBI chr13:39,053,613...39,138,117
Ensembl chr13:39,055,252...39,134,956 		JBrowse link
G SMAD3 SMAD family member 3 enables IEA Ensembl GO_REF:0000107 NCBI chr30:31,246,313...31,360,098
Ensembl chr30:31,245,657...31,363,337 		JBrowse link
G SMARCD3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 enables IEA Ensembl GO_REF:0000107 NCBI chr16:15,279,295...15,311,210
Ensembl chr16:15,279,309...15,417,027 		JBrowse link
G SMARCE1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 enables IBA
IEA		 GO_Central
Ensembl		 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:22,015,402...22,036,424
Ensembl chr 9:22,015,600...22,035,442 		JBrowse link
G SNW1 SNW domain containing 1 enables ISO (PMID:19934264) UniProt PMID:19934264 NCBI chr 8:50,478,924...50,512,360
Ensembl chr 8:50,479,338...50,512,243 		JBrowse link
G TACC1 transforming acidic coiled-coil containing protein 1 enables IEA Ensembl GO_REF:0000107 NCBI chr16:26,677,717...26,797,236
Ensembl chr16:26,682,327...26,797,937 		JBrowse link
G TACC2 transforming acidic coiled-coil containing protein 2 enables IEA Ensembl GO_REF:0000107 NCBI chr28:31,735,673...31,943,184
Ensembl chr28:31,735,792...31,942,927 		JBrowse link
G TADA3 transcriptional adaptor 3 enables ISO (PMID:20413580) UniProt PMID:20413580 NCBI chr20:8,453,269...8,464,921
Ensembl chr20:8,453,489...8,464,913 		JBrowse link
G TAF1 TATA-box binding protein associated factor 1 enables ISO (PMID:20181722) ParkinsonsUK-UCL PMID:20181722 NCBI chr  X:55,693,091...55,764,268
Ensembl chr  X:55,693,194...55,763,683 		JBrowse link
G TCF7L2 transcription factor 7 like 2 enables IEA Ensembl GO_REF:0000107 NCBI chr28:23,966,079...24,162,775
Ensembl chr28:23,966,073...24,163,737 		JBrowse link
G TRIM24 tripartite motif containing 24 enables ISO (PMID:15322135) MGI PMID:15322135 NCBI chr16:10,033,993...10,133,450
Ensembl chr16:10,034,390...10,133,435 		JBrowse link
G TRIP4 thyroid hormone receptor interactor 4 enables IEA Ensembl GO_REF:0000107 NCBI chr30:28,851,314...28,908,991
Ensembl chr30:28,851,374...28,908,940 		JBrowse link
G UBA3 ubiquitin like modifier activating enzyme 3 ISO RGD PMID:11818503 RGD:634396 NCBI chr20:22,657,758...22,682,134
Ensembl chr20:22,657,817...22,681,447 		JBrowse link
nuclear retinoic acid receptor binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTN4 actinin alpha 4 enables IEA Ensembl GO_REF:0000107 NCBI chr 1:114,354,993...114,427,997
Ensembl chr 1:114,309,693...114,427,991 		JBrowse link
G ASXL1 ASXL transcriptional regulator 1 enables IEA Ensembl GO_REF:0000107 NCBI chr24:21,725,126...21,804,745
Ensembl chr24:21,661,059...21,802,815 		JBrowse link
G CNOT1 CCR4-NOT transcription complex subunit 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 2:58,038,456...58,138,364
Ensembl chr 2:58,038,483...58,137,622 		JBrowse link
G CTBP2 C-terminal binding protein 2 enables IEA Ensembl GO_REF:0000107 NCBI chr28:34,259,912...34,415,113
Ensembl chr28:34,260,856...34,415,696 		JBrowse link
G HMGA1 high mobility group AT-hook 1 enables ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr12:3,528,818...3,538,533
Ensembl chr12:3,533,102...3,538,533 		JBrowse link
G LGALS7B galectin 7B enables IEA Ensembl GO_REF:0000107
G LOC100686721 galectin-7 enables IEA Ensembl GO_REF:0000107 NCBI chr 1:114,322,087...114,324,314
Ensembl chr 1:114,309,693...114,427,991 		JBrowse link
G LRIF1 ligand dependent nuclear receptor interacting factor 1 enables IEA InterPro GO_REF:0000002 NCBI chr 6:41,023,383...41,041,776
Ensembl chr 6:41,023,787...41,039,844 		JBrowse link
G MED1 mediator complex subunit 1 enables IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:22,989,257...23,019,350
Ensembl chr 9:22,989,301...23,019,349 		JBrowse link
G MED25 mediator complex subunit 25 enables IEA Ensembl GO_REF:0000107 NCBI chr 1:106,723,737...106,740,077
Ensembl chr 1:106,727,141...106,740,032 		JBrowse link
G NCOA1 nuclear receptor coactivator 1 ISO in presence of retinoic acid RGD PMID:15234273 RGD:5688233 NCBI chr17:18,880,676...19,124,300
Ensembl chr17:18,880,383...19,122,258 		JBrowse link
G NCOA2 nuclear receptor coactivator 2 ISO in presence of retinoic acid RGD PMID:15234273 RGD:5688233 NCBI chr29:19,253,849...19,471,640
Ensembl chr29:19,222,842...19,545,371 		JBrowse link
G NCOA6 nuclear receptor coactivator 6 ISO RGD PMID:10866662 RGD:633378 NCBI chr24:23,802,360...23,877,986
Ensembl chr24:23,802,351...23,866,792 		JBrowse link
G NCOR1 nuclear receptor corepressor 1 enables ISO in absence of retinoic acid
(PMID:8961273)		 RGD
MGI		 PMID:8961273 PMID:15234273 RGD:5688233 NCBI chr 5:39,687,530...39,837,003
Ensembl chr 5:39,687,543...39,836,464 		JBrowse link
G NCOR2 nuclear receptor corepressor 2 ISO in absence of retinoic acid RGD PMID:15234273 RGD:5688233 NCBI chr26:5,352,670...5,493,741
Ensembl chr26:5,331,459...5,493,830 		JBrowse link
G NR0B2 nuclear receptor subfamily 0 group B member 2 ISO RGD PMID:9003453 RGD:633448 NCBI chr 2:73,234,482...73,236,548
Ensembl chr 2:73,234,586...73,236,206 		JBrowse link
G NRIP1 nuclear receptor interacting protein 1 enables ISO (PMID:10531331) UniProt PMID:10531331 NCBI chr31:11,852,330...11,951,735
Ensembl chr31:11,855,338...11,932,056 		JBrowse link
G NSD1 nuclear receptor binding SET domain protein 1 enables ISO (PMID:9628876) UniProt PMID:9628876 NCBI chr 4:36,058,351...36,214,254
Ensembl chr 4:36,063,134...36,210,999 		JBrowse link
G PRAME PRAME nuclear receptor transcriptional regulator enables ISO (PMID:16179254) UniProt PMID:16179254 NCBI chr26:27,124,901...27,137,772
Ensembl chr26:27,124,902...27,136,112 		JBrowse link
G PRMT2 protein arginine methyltransferase 2 enables ISO (PMID:12039952) UniProt PMID:12039952 NCBI chr31:39,806,086...39,838,959
Ensembl chr31:39,807,593...39,838,972 		JBrowse link
G RXRA retinoid X receptor alpha ISO RGD PMID:15234273 RGD:5688233 NCBI chr 9:50,525,195...50,575,720
Ensembl chr 9:50,484,567...50,573,119 		JBrowse link
G RXRB retinoid X receptor beta ISO RGD PMID:1662118 RGD:729677 NCBI chr12:2,657,058...2,663,648
Ensembl chr12:2,657,792...2,663,706 		JBrowse link
G SNW1 SNW domain containing 1 enables ISO (PMID:11514567) UniProt PMID:11514567 NCBI chr 8:50,478,924...50,512,360
Ensembl chr 8:50,479,338...50,512,243 		JBrowse link
G TACC1 transforming acidic coiled-coil containing protein 1 enables IEA Ensembl GO_REF:0000107 NCBI chr16:26,677,717...26,797,236
Ensembl chr16:26,682,327...26,797,937 		JBrowse link
nuclear retinoid X receptor binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARID5A AT-rich interaction domain 5A enables ISO (PMID:15941852) UniProt PMID:15941852 NCBI chr17:34,320,791...34,333,660
Ensembl chr17:34,321,177...34,333,621 		JBrowse link
G FUS FUS RNA binding protein ISO RGD PMID:9440806 RGD:9685715 NCBI chr 6:17,059,904...17,071,227
Ensembl chr 6:17,060,061...17,071,178 		JBrowse link
G HMGA1 high mobility group AT-hook 1 enables ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr12:3,528,818...3,538,533
Ensembl chr12:3,533,102...3,538,533 		JBrowse link
G MED25 mediator complex subunit 25 enables IEA Ensembl GO_REF:0000107 NCBI chr 1:106,723,737...106,740,077
Ensembl chr 1:106,727,141...106,740,032 		JBrowse link
G NCOA1 nuclear receptor coactivator 1 ISO in presence of retinoic acid RGD PMID:15234273 RGD:5688233 NCBI chr17:18,880,676...19,124,300
Ensembl chr17:18,880,383...19,122,258 		JBrowse link
G NCOA2 nuclear receptor coactivator 2 ISO in presence of retinoic acid RGD PMID:15234273 RGD:5688233 NCBI chr29:19,253,849...19,471,640
Ensembl chr29:19,222,842...19,545,371 		JBrowse link
G NCOA6 nuclear receptor coactivator 6 ISO RGD PMID:10866662 RGD:633378 NCBI chr24:23,802,360...23,877,986
Ensembl chr24:23,802,351...23,866,792 		JBrowse link
G NCOR1 nuclear receptor corepressor 1 enables ISO in absence of retinoic acid
(PMID:7760852), (PMID:8961273)		 RGD
MGI		 PMID:7760852 PMID:8961273 PMID:15234273 RGD:5688233 NCBI chr 5:39,687,530...39,837,003
Ensembl chr 5:39,687,543...39,836,464 		JBrowse link
G NCOR2 nuclear receptor corepressor 2 ISO in absence of retinoic acid RGD PMID:15234273 RGD:5688233 NCBI chr26:5,352,670...5,493,741
Ensembl chr26:5,331,459...5,493,830 		JBrowse link
G NR0B2 nuclear receptor subfamily 0 group B member 2 ISO RGD PMID:9003453 RGD:633448 NCBI chr 2:73,234,482...73,236,548
Ensembl chr 2:73,234,586...73,236,206 		JBrowse link
G NR1H2 nuclear receptor subfamily 1 group H member 2 enables ISO
IEA		 RGD
Ensembl		 PMID:7892230 PMID:7971966 GO_REF:0000107 RGD:61674 RGD:729016 NCBI chr 1:106,332,691...106,339,168
Ensembl chr 1:106,332,798...106,339,135 		JBrowse link
G NR1H3 nuclear receptor subfamily 1 group H member 3 ISO RGD PMID:7935418 RGD:61675 NCBI chr18:42,333,173...42,346,152
Ensembl chr18:42,333,202...42,341,236 		JBrowse link
G NR1H4 nuclear receptor subfamily 1 group H member 4 enables IEA Ensembl GO_REF:0000107 NCBI chr15:39,497,313...39,608,120
Ensembl chr15:39,536,290...39,608,116 		JBrowse link
G NRIP1 nuclear receptor interacting protein 1 enables ISO (PMID:10531331) UniProt PMID:10531331 NCBI chr31:11,852,330...11,951,735
Ensembl chr31:11,855,338...11,932,056 		JBrowse link
G NSD1 nuclear receptor binding SET domain protein 1 enables ISO (PMID:9628876) UniProt PMID:9628876 NCBI chr 4:36,058,351...36,214,254
Ensembl chr 4:36,063,134...36,210,999 		JBrowse link
G PPARG peroxisome proliferator activated receptor gamma enables ISO (PMID:19043829)
(PMID:9568715)		 CAFA
BHF-UCL		 PMID:9568715 PMID:19043829 NCBI chr20:6,134,618...6,265,481
Ensembl chr20:6,050,357...6,207,981 		JBrowse link
G PSMC3IP PSMC3 interacting protein ISO RGD PMID:11739747 RGD:628392 NCBI chr 9:20,386,635...20,391,293
Ensembl chr 9:20,386,758...20,390,701 		JBrowse link
G RARB retinoic acid receptor beta ISO RGD PMID:15234273 RGD:5688233 NCBI chr23:18,207,253...18,931,128
Ensembl chr23:18,207,760...18,482,652 		JBrowse link
G RARG retinoic acid receptor gamma enables IEA Ensembl GO_REF:0000107 NCBI chr27:1,958,432...1,978,471
Ensembl chr27:1,958,204...1,978,476 		JBrowse link
G SUMO2 small ubiquitin like modifier 2 ISO RGD PMID:19850744 RGD:8553529 NCBI chr 9:5,298,315...5,311,184
Ensembl chr 9:5,298,340...5,311,184 		JBrowse link
G TACC1 transforming acidic coiled-coil containing protein 1 enables IEA Ensembl GO_REF:0000107 NCBI chr16:26,677,717...26,797,236
Ensembl chr16:26,682,327...26,797,937 		JBrowse link
G UIMC1 ubiquitin interaction motif containing 1 enables ISO (PMID:7760852) MGI PMID:7760852 NCBI chr 4:36,339,711...36,467,035
Ensembl chr 4:36,354,922...36,466,880 		JBrowse link
G VDR vitamin D receptor enables IEA Ensembl GO_REF:0000107 NCBI chr27:6,852,915...6,909,466
Ensembl chr27:6,852,723...6,909,470 		JBrowse link
nuclear thyroid hormone receptor binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARID5A AT-rich interaction domain 5A enables ISO (PMID:15941852) UniProt PMID:15941852 NCBI chr17:34,320,791...34,333,660
Ensembl chr17:34,321,177...34,333,621 		JBrowse link
G BRD8 bromodomain containing 8 enables IEA Ensembl GO_REF:0000107 NCBI chr11:25,793,375...25,825,868
Ensembl chr11:25,793,668...25,825,726 		JBrowse link
G FUS FUS RNA binding protein ISO RGD PMID:9440806 RGD:9685715 NCBI chr 6:17,059,904...17,071,227
Ensembl chr 6:17,060,061...17,071,178 		JBrowse link
G GTF2B general transcription factor IIB enables IEA Ensembl GO_REF:0000107 NCBI chr 6:59,491,986...59,527,142
Ensembl chr 6:59,492,055...59,527,054 		JBrowse link
G GTF2H1 general transcription factor IIH subunit 1 enables IEA Ensembl GO_REF:0000107 NCBI chr21:40,770,661...40,807,329
Ensembl chr21:40,770,983...40,806,556 		JBrowse link
G HR HR lysine demethylase and nuclear receptor corepressor ISO RGD PMID:11641275 RGD:1599577 NCBI chr25:35,120,566...35,136,560
Ensembl chr25:35,119,784...35,135,545 		JBrowse link
G MED1 mediator complex subunit 1 enables ISO
IBA
IEA		 RGD
GO_Central
Ensembl		 PMID:10037764 GO_REF:0000033 GO_REF:0000107 RGD:5134969 NCBI chr 9:22,989,257...23,019,350
Ensembl chr 9:22,989,301...23,019,349 		JBrowse link
G MED12 mediator complex subunit 12 enables ISO (PMID:10198638) UniProt PMID:10198638 NCBI chr  X:55,487,629...55,508,941
Ensembl chr  X:55,482,013...55,509,992 		JBrowse link
G MED13 mediator complex subunit 13 enables IEA Ensembl GO_REF:0000107 NCBI chr 9:34,638,892...34,742,235
Ensembl chr 9:34,641,601...34,738,352 		JBrowse link
G MED16 mediator complex subunit 16 enables IEA Ensembl GO_REF:0000107 NCBI chr20:57,771,543...57,782,839
Ensembl chr20:57,777,827...57,782,819 		JBrowse link
G MED17 mediator complex subunit 17 enables IEA Ensembl GO_REF:0000107 NCBI chr21:6,967,304...6,990,542
Ensembl chr21:6,967,481...6,990,547 		JBrowse link
G MED24 mediator complex subunit 24 enables IEA Ensembl GO_REF:0000107 NCBI chr 9:22,500,937...22,528,262
Ensembl chr 9:22,501,070...22,527,843 		JBrowse link
G MED30 mediator complex subunit 30 enables IEA Ensembl GO_REF:0000107 NCBI chr13:16,928,166...16,949,503
Ensembl chr13:16,928,161...16,949,295 		JBrowse link
G MED4 mediator complex subunit 4 enables ISO (PMID:10198638) UniProt PMID:10198638 NCBI chr22:3,396,276...3,411,037
Ensembl chr22:3,396,267...3,410,608 		JBrowse link
G NCOA2 nuclear receptor coactivator 2 ISO RGD PMID:9742117 RGD:633360 NCBI chr29:19,253,849...19,471,640
Ensembl chr29:19,222,842...19,545,371 		JBrowse link
G NCOA6 nuclear receptor coactivator 6 enables IEA
ISO		 Ensembl
RGD		 PMID:10866662 GO_REF:0000107 RGD:633378 NCBI chr24:23,802,360...23,877,986
Ensembl chr24:23,802,351...23,866,792 		JBrowse link
G NCOR1 nuclear receptor corepressor 1 enables IBA GO_Central GO_REF:0000033 NCBI chr 5:39,687,530...39,837,003
Ensembl chr 5:39,687,543...39,836,464 		JBrowse link
G NR0B2 nuclear receptor subfamily 0 group B member 2 ISO RGD PMID:9003453 RGD:633448 NCBI chr 2:73,234,482...73,236,548
Ensembl chr 2:73,234,586...73,236,206 		JBrowse link
G NSD1 nuclear receptor binding SET domain protein 1 enables ISO (PMID:9628876) UniProt PMID:9628876 NCBI chr 4:36,058,351...36,214,254
Ensembl chr 4:36,063,134...36,210,999 		JBrowse link
G PRMT2 protein arginine methyltransferase 2 enables ISO (PMID:12039952) UniProt PMID:12039952 NCBI chr31:39,806,086...39,838,959
Ensembl chr31:39,807,593...39,838,972 		JBrowse link
G PSMC3IP PSMC3 interacting protein ISO RGD PMID:11739747 RGD:628392 NCBI chr 9:20,386,635...20,391,293
Ensembl chr 9:20,386,758...20,390,701 		JBrowse link
G RXRA retinoid X receptor alpha ISO RGD PMID:10037764 RGD:5134969 NCBI chr 9:50,525,195...50,575,720
Ensembl chr 9:50,484,567...50,573,119 		JBrowse link
G RXRB retinoid X receptor beta ISO RGD PMID:1662118 RGD:729677 NCBI chr12:2,657,058...2,663,648
Ensembl chr12:2,657,792...2,663,706 		JBrowse link
G TACC1 transforming acidic coiled-coil containing protein 1 enables IEA Ensembl GO_REF:0000107 NCBI chr16:26,677,717...26,797,236
Ensembl chr16:26,682,327...26,797,937 		JBrowse link
G TAF11 TATA-box binding protein associated factor 11 enables IEA Ensembl GO_REF:0000107 NCBI chr12:4,088,203...4,095,300
Ensembl chr12:4,088,680...4,094,125 		JBrowse link
G TAF7 TATA-box binding protein associated factor 7 enables IEA Ensembl GO_REF:0000107 NCBI chr 2:36,295,387...36,297,681
Ensembl chr 2:36,295,911...36,296,960 		JBrowse link
G THRAP3 thyroid hormone receptor associated protein 3 enables IEA Ensembl GO_REF:0000107 NCBI chr15:5,955,469...6,022,442
Ensembl chr15:5,956,316...6,021,875 		JBrowse link
G TRIP12 thyroid hormone receptor interactor 12 enables ISO (PMID:7776974) UniProt PMID:7776974 NCBI chr25:42,060,103...42,208,326
Ensembl chr25:42,060,991...42,208,054 		JBrowse link
nuclear vitamin D receptor binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HR HR lysine demethylase and nuclear receptor corepressor ISO RGD PMID:12847098 RGD:1599578 NCBI chr25:35,120,566...35,136,560
Ensembl chr25:35,119,784...35,135,545 		JBrowse link
G MED1 mediator complex subunit 1 enables ISO
IBA
IEA		 RGD
GO_Central
Ensembl		 PMID:17786964 GO_REF:0000033 GO_REF:0000107 RGD:5133443 NCBI chr 9:22,989,257...23,019,350
Ensembl chr 9:22,989,301...23,019,349 		JBrowse link
G NCOA6 nuclear receptor coactivator 6 ISO RGD PMID:10866662 RGD:633378 NCBI chr24:23,802,360...23,877,986
Ensembl chr24:23,802,351...23,866,792 		JBrowse link
G RXRA retinoid X receptor alpha enables IEA Ensembl GO_REF:0000107 NCBI chr 9:50,525,195...50,575,720
Ensembl chr 9:50,484,567...50,573,119 		JBrowse link
G RXRB retinoid X receptor beta ISO RGD PMID:1662118 RGD:729677 NCBI chr12:2,657,058...2,663,648
Ensembl chr12:2,657,792...2,663,706 		JBrowse link
G SNW1 SNW domain containing 1 enables ISO (PMID:12529369) UniProt PMID:12529369 NCBI chr 8:50,478,924...50,512,360
Ensembl chr 8:50,479,338...50,512,243 		JBrowse link
G TAF11 TATA-box binding protein associated factor 11 enables IEA Ensembl GO_REF:0000107 NCBI chr12:4,088,203...4,095,300
Ensembl chr12:4,088,680...4,094,125 		JBrowse link
G TAF7 TATA-box binding protein associated factor 7 enables IEA Ensembl GO_REF:0000107 NCBI chr 2:36,295,387...36,297,681
Ensembl chr 2:36,295,911...36,296,960 		JBrowse link
G TOB2 transducer of ERBB2, 2 enables IEA Ensembl GO_REF:0000107 NCBI chr10:23,817,778...23,830,330
Ensembl chr10:23,826,437...23,827,447 		JBrowse link
STAT family protein binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CEBPA CCAAT enhancer binding protein alpha enables ISO (PMID:15664994), (PMID:24429361) ARUK-UCL PMID:15664994 PMID:24429361 NCBI chr 1:118,846,252...118,851,045 JBrowse link
G DTX3L deltex E3 ubiquitin ligase 3L enables IEA Ensembl GO_REF:0000107 NCBI chr33:25,676,686...25,684,270
Ensembl chr33:25,677,076...25,684,175 		JBrowse link
G EP300 E1A binding protein p300 enables IEA Ensembl GO_REF:0000107 NCBI chr10:24,076,538...24,156,708
Ensembl chr10:24,077,971...24,156,396 		JBrowse link
G FAM220A family with sequence similarity 220 member A enables IBA GO_Central GO_REF:0000033
G HSF1 heat shock transcription factor 1 ISO RGD PMID:22426029 RGD:10402789 NCBI chr13:37,724,741...37,745,259
Ensembl chr13:37,724,759...37,745,252 		JBrowse link
G LOC100683001 small integral membrane protein 10-like protein 2A enables ISO (PMID:26026268) MGI PMID:26026268 NCBI chr 6:11,692,532...11,711,505 JBrowse link
G PARP9 poly(ADP-ribose) polymerase family member 9 enables IEA Ensembl GO_REF:0000107 NCBI chr33:25,643,439...25,676,979
Ensembl chr33:25,643,883...25,677,462 		JBrowse link
G PPARG peroxisome proliferator activated receptor gamma enables ISO (PMID:28467929) ARUK-UCL PMID:28467929 NCBI chr20:6,134,618...6,265,481
Ensembl chr20:6,050,357...6,207,981 		JBrowse link
G PTPN2 protein tyrosine phosphatase non-receptor type 2 enables IEA Ensembl GO_REF:0000107 NCBI chr 7:78,160,564...78,252,382
Ensembl chr 7:78,160,589...78,252,719 		JBrowse link
G PTPRT protein tyrosine phosphatase receptor type T enables IEA Ensembl GO_REF:0000107 NCBI chr24:29,992,957...30,764,469
Ensembl chr24:30,000,637...30,820,835 		JBrowse link
G SPI1 Spi-1 proto-oncogene enables IEA Ensembl GO_REF:0000107 NCBI chr18:42,253,849...42,269,497
Ensembl chr18:42,253,811...42,269,727 		JBrowse link
Tat protein binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTB actin beta enables ISO (PMID:16687403) BHF-UCL PMID:16687403 NCBI chr 6:12,421,006...12,424,449
Ensembl chr 6:12,418,932...12,462,845 		JBrowse link
G CTDP1 CTD phosphatase subunit 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 1:886,973...945,994
Ensembl chr 1:762,020...946,142 		JBrowse link
G DLL1 delta like canonical Notch ligand 1 enables ISO (PMID:15509766) UniProt PMID:15509766 NCBI chr12:72,265,078...72,272,347
Ensembl chr12:72,265,682...72,272,348 		JBrowse link
G DNAJA1 DnaJ heat shock protein family (Hsp40) member A1 enables ISO (PMID:14752510) ParkinsonsUK-UCL PMID:14752510 NCBI chr11:50,156,089...50,168,379
Ensembl chr11:50,156,089...50,167,536 		JBrowse link
G DNAJA1 DnaJ heat shock protein family (Hsp40) member A1 enables IEA Ensembl GO_REF:0000107
G GABARAPL1 GABA type A receptor associated protein like 1 enables ISO (PMID:22354992) UniProt PMID:22354992 NCBI chr27:35,783,203...35,791,576
Ensembl chr27:35,782,330...35,791,569 		JBrowse link
G LOC119876730 dnaJ homolog subfamily A member 1 enables IEA Ensembl GO_REF:0000107
G MDFIC MyoD family inhibitor domain containing enables ISO (PMID:12944466), (PMID:16260749) UniProt PMID:12944466 PMID:16260749 NCBI chr14:54,063,832...54,153,346
Ensembl chr14:54,063,769...54,166,197 		JBrowse link
G NPM1 nucleophosmin 1 enables ISO (PMID:9094689) UniProt PMID:9094689 NCBI chr 4:40,756,464...40,770,174
Ensembl chr 4:40,756,465...40,770,175 		JBrowse link
G SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 enables IEA Ensembl GO_REF:0000107 NCBI chr20:50,175,489...50,268,865
Ensembl chr20:50,175,687...50,268,836 		JBrowse link
G SMARCB1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 enables IEA Ensembl GO_REF:0000107 NCBI chr26:28,692,610...28,728,778
Ensembl chr26:28,692,899...28,728,783 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 21958
    binding 19833
      protein binding 14651
        transcription factor binding 663
          DNA-binding transcription factor binding 538
            RNA polymerase II-specific DNA-binding transcription factor binding 386
              NF-kappaB binding 36
              NFAT protein binding 6
              STAT family protein binding 11
              Tat protein binding 11
              aryl hydrocarbon receptor binding 9
              nuclear receptor binding + 155
paths to the root