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ONTOLOGY REPORT - ANNOTATIONS


Term:ganglion development
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Accession:GO:0061548 term browser browse the term
Definition:The process whose specific outcome is the progression of a ganglion over time, from its formation to the mature structure.
Synonyms:narrow_synonym: gangliogenesis
 related_synonym: ganglia development



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ganglion development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp1b1 cytochrome P450, family 1, subfamily b, polypeptide 1 IEP retinal ganglion cells RGD PMID:17687037 RGD:7800681 NCBI chr 6:21,093,927...21,103,091
Ensembl chr 6:15,342,344...15,350,917
JBrowse link
G Dicer1 dicer 1 ribonuclease III acts_upstream_of_or_within ISO MGI:3589208 (PMID:21098571) RGD PMID:21098571 NCBI chr 6:129,392,298...129,457,252
Ensembl chr 6:123,631,250...123,693,965
JBrowse link
G Kcnq3 potassium voltage-gated channel subfamily Q member 3 IEP RGD PMID:12832524 RGD:9686367 NCBI chr 7:99,614,089...99,914,736
Ensembl chr 7:97,730,465...98,025,653
JBrowse link
G Rapgef4 Rap guanine nucleotide exchange factor 4 IEP RGD PMID:18583150 RGD:9835386 NCBI chr 3:77,217,024...77,509,933
Ensembl chr 3:56,809,270...57,102,316
JBrowse link
G Tulp3 TUB like protein 3 acts_upstream_of_or_within ISO MGI:2388066 (PMID:11406614) RGD PMID:11406614 NCBI chr 4:163,276,583...163,318,297
Ensembl chr 4:161,590,479...161,632,149
JBrowse link
cranial ganglion development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:11262227)
Ensembl
RGD
PMID:11262227 GO_REF:0000107 NCBI chr 8:129,517,576...129,544,661
Ensembl chr 8:120,639,995...120,667,111
JBrowse link
dorsal root ganglion development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:11262227)
Ensembl
RGD
PMID:11262227 GO_REF:0000107 NCBI chr 8:129,517,576...129,544,661
Ensembl chr 8:120,639,995...120,667,111
JBrowse link
G Pou4f2 POU class 4 homeobox 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:10357904)
UniProt
RGD
PMID:10357904 GO_REF:0000024 NCBI chr19:46,390,958...46,394,599
Ensembl chr19:29,486,686...29,490,327
JBrowse link
G Rapgef3 Rap guanine nucleotide exchange factor 3 IEP RGD PMID:18583150 RGD:9835386 NCBI chr 7:130,754,883...130,777,303
Ensembl chr 7:128,875,773...128,898,521
JBrowse link
G Rgs4 regulator of G-protein signaling 4 IEP RGD PMID:14550772 RGD:13524539 NCBI chr13:84,469,593...84,475,884
Ensembl chr13:81,936,775...81,943,068
JBrowse link
G Tubb3 tubulin, beta 3 class III involved_in ISO
ISS
(PMID:28483977)
GO_REF:0000024
RGD
UniProt
PMID:28483977 GO_REF:0000024 NCBI chr19:68,365,687...68,374,741
Ensembl chr19:51,457,184...51,466,243
JBrowse link
G Unc5c unc-5 netrin receptor C involved_in ISO
ISS
IEA
(PMID:28483977)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:28483977 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:232,854,352...233,208,482
Ensembl chr 2:230,180,951...230,535,217
JBrowse link
dorsal root ganglion morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nrp1 neuropilin 1 involved_in ISO (PMID:19386662) RGD PMID:19386662 NCBI chr19:73,256,557...73,411,705
Ensembl chr19:56,359,455...56,513,633
JBrowse link
G Nrp2 neuropilin 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:19386662)
Ensembl
RGD
PMID:19386662 GO_REF:0000107 NCBI chr 9:71,616,602...71,731,869
Ensembl chr 9:64,123,132...64,237,958
JBrowse link
facioacoustic ganglion development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nrp1 neuropilin 1 involved_in ISO (PMID:18356247) RGD PMID:18356247 NCBI chr19:73,256,557...73,411,705
Ensembl chr19:56,359,455...56,513,633
JBrowse link
G Nrp2 neuropilin 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:18356247)
Ensembl
RGD
PMID:18356247 GO_REF:0000107 NCBI chr 9:71,616,602...71,731,869
Ensembl chr 9:64,123,132...64,237,958
JBrowse link
G Sema3a semaphorin 3A involved_in ISO (PMID:18356247) RGD PMID:18356247 NCBI chr 4:22,239,418...22,709,907
Ensembl chr 4:21,287,982...21,494,432
JBrowse link
sympathetic ganglion development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl1 achaete-scute family bHLH transcription factor 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:18094025)
UniProt
RGD
PMID:18094025 GO_REF:0000024 NCBI chr 7:23,790,642...23,793,509
Ensembl chr 7:21,903,126...21,905,993
JBrowse link
G Ctnnb1 catenin beta 1 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:21325504)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:21325504 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:129,517,576...129,544,661
Ensembl chr 8:120,639,995...120,667,111
JBrowse link
G Fzd3 frizzled class receptor 3 involved_in ISO (PMID:21325504) RGD PMID:21325504 NCBI chr15:43,596,962...43,664,047
Ensembl chr15:39,421,355...39,488,369
JBrowse link
G Insm1 INSM transcriptional repressor 1 involved_in ISO (PMID:18094025) RGD PMID:18094025 NCBI chr 3:154,093,310...154,096,243
Ensembl chr 3:133,639,580...133,643,003
JBrowse link
G Nrp1 neuropilin 1 involved_in ISO (PMID:19325129), (PMID:22790009) RGD PMID:19325129 PMID:22790009 NCBI chr19:73,256,557...73,411,705
Ensembl chr19:56,359,455...56,513,633
JBrowse link
G Nrp2 neuropilin 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:22790009)
Ensembl
RGD
PMID:22790009 GO_REF:0000107 NCBI chr 9:71,616,602...71,731,869
Ensembl chr 9:64,123,132...64,237,958
JBrowse link
G Phox2b paired-like homeobox 2b involved_in ISO (PMID:18094025) RGD PMID:18094025 NCBI chr14:41,420,011...41,424,527
Ensembl chr14:41,066,264...41,068,978
JBrowse link
G Sema3a semaphorin 3A involved_in ISO (PMID:22790009) RGD PMID:22790009 NCBI chr 4:22,239,418...22,709,907
Ensembl chr 4:21,287,982...21,494,432
JBrowse link
G Sema3f semaphorin 3F involved_in ISO (PMID:22790009) RGD PMID:22790009 NCBI chr 8:117,236,269...117,265,206
Ensembl chr 8:108,357,629...108,387,083
JBrowse link
trigeminal ganglion development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nrp1 neuropilin 1 involved_in ISO (PMID:18356247) RGD PMID:18356247 NCBI chr19:73,256,557...73,411,705
Ensembl chr19:56,359,455...56,513,633
JBrowse link
G Nrp2 neuropilin 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:18356247)
Ensembl
RGD
PMID:18356247 GO_REF:0000107 NCBI chr 9:71,616,602...71,731,869
Ensembl chr 9:64,123,132...64,237,958
JBrowse link
G Sema3a semaphorin 3A involved_in ISO (PMID:18356247) RGD PMID:18356247 NCBI chr 4:22,239,418...22,709,907
Ensembl chr 4:21,287,982...21,494,432
JBrowse link
G Six1 SIX homeobox 1 involved_in ISO (PMID:16938278) RGD PMID:16938278 NCBI chr 6:97,482,617...97,487,853
Ensembl chr 6:91,746,739...91,751,975
JBrowse link
G Six4 SIX homeobox 4 involved_in ISO (PMID:16938278) RGD PMID:16938278 NCBI chr 6:97,538,202...97,551,872
Ensembl chr 6:91,802,329...91,815,992
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20536
    developmental process 7109
      anatomical structure development 6611
        tissue development 2314
          ganglion development 21
            cranial ganglion development + 6
            dorsal root ganglion development + 8
            ganglion maturation + 0
            ganglion morphogenesis + 2
            sympathetic ganglion development 9
Path 2
Term Annotations click to browse term
  biological_process 20536
    developmental process 7109
      anatomical structure development 6611
        multicellular organism development 5330
          system development 4612
            nervous system development 2862
              ganglion development 21
                cranial ganglion development + 6
                dorsal root ganglion development + 8
                ganglion maturation + 0
                ganglion morphogenesis + 2
                sympathetic ganglion development 9
paths to the root