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ONTOLOGY REPORT - ANNOTATIONS

Term:trophoblast cell migration
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Accession:GO:0061450 term browser browse the term
Definition:Trophoblast cell migration that is accomplished by extension and retraction of a pseudopodium. Trophoblast cells line the outside of the blastocyst.


show annotations for term's descendants           Sort by:
trophoblast cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ITGB4 integrin subunit beta 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21606200) Ensembl
MGI		 PMID:21606200 GO_REF:0000107 NCBI chr 9:4,825,148...4,855,266
Ensembl chr 9:4,825,292...4,855,820 		JBrowse link
negative regulation of trophoblast cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVR1C activin A receptor type 1C involved_in IEA Ensembl GO_REF:0000107 NCBI chr36:3,534,231...3,583,310
Ensembl chr36:3,541,248...3,613,384 		JBrowse link
G ARHGDIB Rho GDP dissociation inhibitor beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:31,662,817...31,681,951
Ensembl chr27:31,662,925...31,681,642 		JBrowse link
G CALR calreticulin involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:49,251,390...49,255,291
Ensembl chr20:49,251,777...49,255,245 		JBrowse link
G GJA1 gap junction protein alpha 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:60,941,772...60,944,694
Ensembl chr 1:60,929,097...60,942,936 		JBrowse link
G MIR15B microRNA mir-15b involved_in ISO (PMID:27208409) BHF-UCL PMID:27208409 NCBI chr34:26,460,663...26,460,722
Ensembl chr34:26,460,645...26,460,741 		JBrowse link
G MIR16-1 microRNA mir-16-1 acts_upstream_of ISO (PMID:23083510) ARUK-UCL PMID:23083510 NCBI chr22:1,847,020...1,847,084
Ensembl chr22:1,847,007...1,847,093 		JBrowse link
G MIR16-2 microRNA mir-16-2 acts_upstream_of ISO (PMID:23083510) ARUK-UCL PMID:23083510 NCBI chr34:26,460,807...26,460,871
Ensembl chr34:26,460,807...26,460,871 		JBrowse link
G NODAL nodal growth differentiation factor involved_in ISO (PMID:21356369) BHF-UCL PMID:21356369 NCBI chr 4:21,366,828...21,374,623
Ensembl chr 4:21,367,583...21,375,151 		JBrowse link
G TIMP1 TIMP metallopeptidase inhibitor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:41,201,623...41,205,314
Ensembl chr  X:41,201,638...41,205,310 		JBrowse link
positive regulation of trophoblast cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVR1B activin A receptor type 1B involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:3,009,710...3,029,726
Ensembl chr27:2,994,857...3,042,396 		JBrowse link
G AGO2 argonaute RISC catalytic component 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:35,169,243...35,230,252
Ensembl chr13:35,180,912...35,268,577 		JBrowse link
G APELA apelin receptor early endogenous ligand involved_in ISO (PMID:28663440) UniProt PMID:28663440 NCBI chr15:60,967,944...60,990,955 JBrowse link
G C1QBP complement C1q binding protein involved_in ISO (PMID:20810993) UniProt PMID:20810993 NCBI chr 5:31,354,665...31,359,672
Ensembl chr 5:31,354,723...31,359,469 		JBrowse link
G SMURF2 SMAD specific E3 ubiquitin protein ligase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:12,348,777...12,472,636
Ensembl chr 9:12,351,627...12,471,467 		JBrowse link
G SYDE1 synapse defective Rho GTPase homolog 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:47,021,789...47,028,606
Ensembl chr20:47,021,775...47,028,714 		JBrowse link
G VEGFA vascular endothelial growth factor A involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:12,209,032...12,224,978
Ensembl chr12:12,208,231...12,224,965 		JBrowse link
regulation of trophoblast cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FBN2 fibrillin 2 involved_in ISO (PMID:32329225) UniProt PMID:32329225 NCBI chr11:17,311,238...17,551,536
Ensembl chr11:17,311,226...17,551,536 		JBrowse link
G ITGB3 integrin subunit beta 3 acts_upstream_of_or_within ISO (PMID:15031111) MGI PMID:15031111 NCBI chr 9:9,179,667...9,231,061
Ensembl chr 9:9,182,562...9,231,451 		JBrowse link
G MMP12 matrix metallopeptidase 12 ISO RGD PMID:27807143 RGD:12910498 NCBI chr 5:28,918,626...28,933,404
Ensembl chr 5:28,918,594...28,933,309 		JBrowse link
G YTHDF3 YTH N6-methyladenosine RNA binding protein F3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:13,239,900...13,280,035
Ensembl chr29:13,239,966...13,277,051 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17917
    reproductive process 1750
      embryo implantation 82
        trophoblast cell migration 21
          negative regulation of trophoblast cell migration 9
          positive regulation of trophoblast cell migration 7
          regulation of trophoblast cell migration + 20
Path 2
Term Annotations click to browse term
  biological_process 17917
    cellular process 16926
      cell motility 1947
        cell migration 1722
          ameboidal-type cell migration 544
            trophoblast cell migration 21
              negative regulation of trophoblast cell migration 9
              positive regulation of trophoblast cell migration 7
              regulation of trophoblast cell migration + 20
paths to the root