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ONTOLOGY REPORT - ANNOTATIONS

Term:trophoblast cell migration
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Accession:GO:0061450 term browser browse the term
Definition:Trophoblast cell migration that is accomplished by extension and retraction of a pseudopodium. Trophoblast cells line the outside of the blastocyst.


show annotations for term's descendants           Sort by:
trophoblast cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Itgb4 integrin subunit beta 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:4331862 (MGI:5052233|PMID:21606200)		 Ensembl
RGD		 PMID:21606200 GO_REF:0000107 MGI:5052233 NCBI chr10:101,206,657...101,243,012
Ensembl chr10:101,206,665...101,243,012 		JBrowse link
negative regulation of trophoblast cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1c activin A receptor type 1C involved_in ISO
IEA		 (PMID:21356369)
GO_REF:0000107		 RGD
Ensembl		 PMID:21356369 GO_REF:0000107 NCBI chr 3:42,815,490...42,892,423
Ensembl chr 3:42,822,610...42,892,327 		JBrowse link
G Arhgdib Rho GDP dissociation inhibitor beta involved_in ISO (PMID:24554735) RGD PMID:24554735 NCBI chr 4:169,822,951...169,841,884
Ensembl chr 4:169,822,952...169,841,658 		JBrowse link
G Calr calreticulin involved_in ISO (PMID:22377355) RGD PMID:22377355 NCBI chr19:23,308,525...23,313,420
Ensembl chr19:23,308,351...23,313,414 		JBrowse link
G Gja1 gap junction protein, alpha 1 involved_in ISO (PMID:30599359) RGD PMID:30599359 NCBI chr20:35,756,007...35,768,481
Ensembl chr20:35,755,991...35,768,582 		JBrowse link
G Mir15b microRNA 15b involved_in ISO (PMID:27208409) RGD PMID:27208409 NCBI chr 2:153,245,200...153,245,297
Ensembl chr 2:153,245,200...153,245,297 		JBrowse link
G Mir16 microRNA 16 acts_upstream_of ISO (PMID:23083510) RGD PMID:23083510 NCBI chr 2:153,245,349...153,245,443
Ensembl chr 2:153,245,349...153,245,443 		JBrowse link
G Nodal nodal growth differentiation factor involved_in ISO (PMID:21356369) RGD PMID:21356369 NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837 		JBrowse link
G Timp1 TIMP metallopeptidase inhibitor 1 involved_in ISO (PMID:21356369) RGD PMID:21356369 NCBI chr  X:1,212,969...1,217,714
Ensembl chr  X:1,212,972...1,217,664 		JBrowse link
positive regulation of trophoblast cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1b activin A receptor type 1B involved_in ISO
IEA		 (PMID:21356369)
GO_REF:0000107		 RGD
Ensembl		 PMID:21356369 GO_REF:0000107 NCBI chr 7:132,286,266...132,329,679
Ensembl chr 7:132,286,275...132,329,673 		JBrowse link
G Ago2 argonaute RISC catalytic component 2 involved_in ISO
IEA		 (PMID:27208409)
GO_REF:0000107		 RGD
Ensembl		 PMID:27208409 GO_REF:0000107 NCBI chr 7:105,018,202...105,105,118
Ensembl chr 7:105,029,120...105,104,974 		JBrowse link
G Apela apelin receptor early endogenous ligand involved_in ISO
ISS		 (PMID:28663440)
GO_REF:0000024		 RGD
UniProt		 PMID:28663440 GO_REF:0000024 NCBI chr16:24,694,356...24,703,466
Ensembl chr16:24,694,324...24,703,465 		JBrowse link
G C1qbp complement C1q binding protein involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:20810993)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:20810993 GO_REF:0000024 GO_REF:0000107 NCBI chr10:55,699,954...55,704,605
Ensembl chr10:55,699,954...55,704,649 		JBrowse link
G Smurf2 SMAD specific E3 ubiquitin protein ligase 2 involved_in ISO (PMID:19255252) RGD PMID:19255252 NCBI chr10:91,761,798...91,862,485
Ensembl chr10:91,761,807...91,862,488 		JBrowse link
G Syde1 synapse defective Rho GTPase homolog 1 involved_in ISO (PMID:27917469) RGD PMID:27917469 NCBI chr 7:11,032,931...11,038,917
Ensembl chr 7:11,032,898...11,039,869 		JBrowse link
G Vegfa vascular endothelial growth factor A involved_in ISO
IEA		 (PMID:23083510)
GO_REF:0000107		 RGD
Ensembl		 PMID:23083510 GO_REF:0000107 NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641 		JBrowse link
regulation of trophoblast cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fbn2 fibrillin 2 involved_in ISO (PMID:32329225) RGD PMID:32329225 NCBI chr18:51,499,670...51,703,976
Ensembl chr18:51,499,737...51,703,976 		JBrowse link
G Itgb3 integrin subunit beta 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3051967|PMID:15031111)
GO_REF:0000107		 RGD
Ensembl		 PMID:15031111 GO_REF:0000107 MGI:3051967 NCBI chr10:89,509,917...89,564,679
Ensembl chr10:89,509,989...89,564,679 		JBrowse link
G Mmp12 matrix metallopeptidase 12 IMP RGD PMID:27807143 RGD:12910498 NCBI chr 8:4,581,785...4,591,687
Ensembl chr 8:4,581,785...4,599,611 		JBrowse link
G Ythdf3 YTH N6-methyladenosine RNA binding protein F3 involved_in ISO (PMID:32194978) RGD PMID:32194978 NCBI chr 2:98,350,304...98,384,608
Ensembl chr 2:98,350,588...98,384,606 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19553
    reproductive process 1817
      trophoblast cell migration 20
        negative regulation of trophoblast cell migration 8
        positive regulation of trophoblast cell migration 7
        regulation of trophoblast cell migration + 19
Path 2
Term Annotations click to browse term
  biological_process 19553
    reproduction 1827
      reproductive process 1817
        multi-organism reproductive process 330
          female pregnancy 305
            embryo implantation 86
              trophoblast cell migration 20
                negative regulation of trophoblast cell migration 8
                positive regulation of trophoblast cell migration 7
                regulation of trophoblast cell migration + 19
paths to the root