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ONTOLOGY REPORT - ANNOTATIONS

Term:connective tissue development
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Accession:GO:0061448 term browser browse the term
Definition:The progression of a connective tissue over time, from its formation to the mature structure.


show annotations for term's descendants           Sort by:
connective tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCN2 cellular communication network factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23839921) Ensembl
MGI		 PMID:23839921 GO_REF:0000107 NCBI chr 1:31,674,398...31,677,697
Ensembl chr 1:31,674,394...31,677,691 		JBrowse link
G DMD dystrophin acts_upstream_of_or_within ISO (PMID:23798567) MGI PMID:23798567 NCBI chr  X:27,028,223...29,650,728
Ensembl chr  X:27,028,231...28,383,840 		JBrowse link
G DSPP dentin sialophosphoprotein acts_upstream_of_or_within ISO (PMID:25027178) MGI PMID:25027178 NCBI chr 8:131,318,187...131,444,274
Ensembl chr 8:131,319,983...131,472,761 		JBrowse link
G FKRP fukutin related protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21224063) Ensembl
MGI		 PMID:21224063 GO_REF:0000107 NCBI chr 6:52,627,466...52,639,255
Ensembl chr 6:52,627,471...52,639,253 		JBrowse link
G FOXA1 forkhead box A1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23383217) Ensembl
MGI		 PMID:23383217 GO_REF:0000107 NCBI chr 7:62,471,233...62,479,638
Ensembl chr 7:62,471,249...62,479,220 		JBrowse link
G FOXA2 forkhead box A2 acts_upstream_of_or_within ISO (PMID:23383217) MGI PMID:23383217 NCBI chr17:29,997,397...30,001,704
Ensembl chr17:29,997,401...30,001,707 		JBrowse link
G LARGE1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within ISO (PMID:23798567)
(PMID:25661440)		 MGI PMID:23798567 PMID:25661440
G LOX lysyl oxidase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25715398) Ensembl
MGI		 PMID:25715398 GO_REF:0000107 NCBI chr 2:125,595,115...125,607,026
Ensembl chr 2:125,591,789...125,607,594 		JBrowse link
G SLC39A13 solute carrier family 39 member 13 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:15,194,028...15,202,936
Ensembl chr 2:15,194,017...15,210,425 		JBrowse link
G TGFB1 transforming growth factor beta 1 acts_upstream_of_or_within ISO (PMID:25715398) MGI PMID:25715398 NCBI chr 6:49,332,169...49,348,642
Ensembl chr 6:49,332,173...49,349,046 		JBrowse link
adipose tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AACS acetoacetyl-CoA synthetase ISO RGD PMID:16055091 RGD:2301021 NCBI chr14:28,109,845...28,169,261
Ensembl chr14:28,109,869...28,169,253 		JBrowse link
G ABHD15 abhydrolase domain containing 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:45,752,848...45,761,850
Ensembl chr12:45,755,559...45,761,878 		JBrowse link
G ACAT1 acetyl-CoA acetyltransferase 1 ISO RGD PMID:2866764 RGD:2326101 NCBI chr 9:36,525,266...36,545,634
Ensembl chr 9:36,525,261...36,545,633 		JBrowse link
G ADRM1 ADRM1 26S proteasome ubiquitin receptor involved_in ISO (MGI:4849324|PMID:21048919) BHF-UCL PMID:21048919 MGI:4849324 NCBI chr17:61,692,923...61,698,138
Ensembl chr17:61,692,945...61,698,144 		JBrowse link
G AMER1 APC membrane recruitment protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21571217) Ensembl
MGI		 PMID:21571217 GO_REF:0000107 NCBI chr  X:50,842,049...50,864,105
Ensembl chr  X:50,844,683...50,864,032 		JBrowse link
G AP1S2 adaptor related protein complex 1 subunit sigma 2 acts_upstream_of_or_within ISO (PMID:24928897) MGI PMID:24928897 NCBI chr  X:12,367,785...12,397,672
Ensembl chr  X:12,367,795...12,397,677 		JBrowse link
G ARID5B AT-rich interaction domain 5B involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:65,408,603...65,598,485
Ensembl chr14:65,408,598...65,598,485 		JBrowse link
G ATF2 activating transcription factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19948881) Ensembl
MGI		 PMID:19948881 GO_REF:0000107 NCBI chr15:80,984,969...81,076,573
Ensembl chr15:80,985,126...81,081,014 		JBrowse link
G BDH1 3-hydroxybutyrate dehydrogenase 1 ISO RGD PMID:2866764 RGD:2326101 NCBI chr13:132,602,372...132,647,271
Ensembl chr13:132,605,489...132,645,937 		JBrowse link
G BSCL2 BSCL2 lipid droplet biogenesis associated, seipin acts_upstream_of_or_within ISO (PMID:21551454) MGI PMID:21551454 NCBI chr 2:9,052,676...9,064,890
Ensembl chr 2:9,052,070...9,064,886 		JBrowse link
G CD2AP CD2 associated protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:29729186) Ensembl
MGI		 PMID:29729186 GO_REF:0000107 NCBI chr 7:42,218,016...42,332,523
Ensembl chr 7:42,218,290...42,332,518 		JBrowse link
G CREB5 cAMP responsive element binding protein 5 acts_upstream_of_or_within ISO (PMID:19948881) MGI PMID:19948881 NCBI chr18:43,840,553...44,264,514
Ensembl chr18:43,844,942...44,261,031 		JBrowse link
G DHRS7B dehydrogenase/reductase 7B acts_upstream_of_or_within ISO (PMID:28930673) MGI PMID:28930673 NCBI chr12:61,320,665...61,347,542
Ensembl chr12:61,320,730...61,350,219 		JBrowse link
G DYRK1B dual specificity tyrosine phosphorylation regulated kinase 1B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:48,305,837...48,314,523
Ensembl chr 6:48,305,849...48,314,514 		JBrowse link
G EBF2 EBF transcription factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23499423) Ensembl
MGI		 PMID:23499423 GO_REF:0000107 NCBI chr14:9,816,992...10,027,574
Ensembl chr14:9,817,002...10,025,164 		JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (PMID:25368121)
(PMID:31730234)		 MGI PMID:25368121 PMID:31730234 NCBI chr 1:31,724,290...31,796,594
Ensembl chr 1:31,722,721...31,796,595 		JBrowse link
G FGL1 fibrinogen like 1 acts_upstream_of_or_within ISO (PMID:23483972) MGI PMID:23483972 NCBI chr17:5,546,931...5,596,434
Ensembl chr17:5,547,126...5,576,790 		JBrowse link
G FTO FTO alpha-ketoglutarate dependent dioxygenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:31,177,112...31,564,674
Ensembl chr 6:31,174,569...31,564,718 		JBrowse link
G GUCA2B guanylate cyclase activator 2B involved_in ISO (PMID:24898144) MGI PMID:24898144 NCBI chr 6:169,152,172...169,154,557
Ensembl chr 6:169,152,179...169,154,551 		JBrowse link
G HMGA2 high mobility group AT-hook 2 acts_upstream_of_or_within ISO (PMID:24728959)
(PMID:7958830)		 MGI PMID:7958830 PMID:24728959 NCBI chr 5:30,188,521...30,329,635 JBrowse link
G HRAS HRas proto-oncogene, GTPase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:299,662...302,539
Ensembl chr 2:299,660...302,501 		JBrowse link
G HSD17B1 hydroxysteroid 17-beta dehydrogenase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:29180785) Ensembl
MGI		 PMID:29180785 GO_REF:0000107 NCBI chr12:20,269,468...20,271,349
Ensembl chr12:20,269,056...20,271,548 		JBrowse link
G ID2 inhibitor of DNA binding 2 acts_upstream_of_or_within ISO (PMID:18562627) MGI PMID:18562627 NCBI chr 3:127,500,759...127,503,207
Ensembl chr 3:127,500,763...127,503,257 		JBrowse link
G LEP leptin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10742101) Ensembl
MGI		 PMID:10742101 GO_REF:0000107 NCBI chr18:20,106,867...20,124,071
Ensembl chr18:20,106,868...20,123,323 		JBrowse link
G LIPA lipase A, lysosomal acid type involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:29374543) Ensembl
MGI		 PMID:29374543 GO_REF:0000107 NCBI chr14:101,131,372...101,254,739
Ensembl chr14:101,126,257...101,193,614 		JBrowse link
G LOC100623720 collagen alpha-1(VI) chain acts_upstream_of_or_within ISO (PMID:19114551) MGI PMID:19114551 NCBI chr13:208,295,245...208,321,789
Ensembl chr13:208,295,451...208,313,127 		JBrowse link
G LOC110260333 hydroxymethylglutaryl-CoA synthase, mitochondrial-like ISO RGD PMID:10357839 RGD:2326128 NCBI chr 4:101,385,486...101,404,273
Ensembl chr 4:101,385,512...101,443,405 		JBrowse link
G LRP5 LDL receptor related protein 5 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:4,533,721...4,653,997
Ensembl chr 2:4,533,614...4,653,944 		JBrowse link
G NAMPT nicotinamide phosphoribosyltransferase NOT|involved_in ISO (PMID:17983582) BHF-UCL PMID:17983582 NCBI chr 9:106,119,896...106,162,126
Ensembl chr 9:106,119,899...106,294,586 		JBrowse link
G OXCT1 3-oxoacid CoA-transferase 1 ISO RGD PMID:2866764 RGD:2326101 NCBI chr16:26,514,497...26,659,739
Ensembl chr16:26,512,401...26,659,808 		JBrowse link
G PAXIP1 PAX interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:3,066,853...3,111,239
Ensembl chr18:3,066,848...3,111,240 		JBrowse link
G PGRMC2 progesterone receptor membrane component 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:96,692,823...96,710,218
Ensembl chr 8:96,692,777...96,709,994 		JBrowse link
G PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24691033) Ensembl
MGI		 PMID:24691033 GO_REF:0000107 NCBI chr13:117,193,935...117,282,151
Ensembl chr13:117,180,544...117,274,587 		JBrowse link
G PPARD peroxisome proliferator activated receptor delta involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11756685) Ensembl
MGI		 PMID:11756685 GO_REF:0000107 NCBI chr 7:31,222,533...31,295,221
Ensembl chr 7:31,222,585...31,295,211 		JBrowse link
G PPARGC1A PPARG coactivator 1 alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:17,841,844...18,527,953
Ensembl chr 8:17,841,844...17,946,992 		JBrowse link
G PUM2 pumilio RNA binding family member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:117,857,930...117,965,564
Ensembl chr 3:117,883,673...117,965,293 		JBrowse link
G RASAL2 RAS protein activator like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:119,941,303...120,329,817
Ensembl chr 9:119,941,862...120,325,316 		JBrowse link
G RORC RAR related orphan receptor C involved_in ISO (MGI:5545969|PMID:21853531) UniProt PMID:21853531 MGI:5545969 NCBI chr 4:97,374,672...97,399,017
Ensembl chr 4:97,375,136...97,400,209 		JBrowse link
G SELENOM selenoprotein M acts_upstream_of_or_within ISO (PMID:23880772) MGI PMID:23880772 NCBI chr14:47,902,862...47,905,350
Ensembl chr14:47,902,864...47,905,440 		JBrowse link
G SH3PXD2B SH3 and PX domains 2B involved_in ISO (MGI:4439252|PMID:20137777) UniProt PMID:20137777 MGI:4439252 NCBI chr16:51,733,170...51,858,774
Ensembl chr16:51,733,135...51,858,772 		JBrowse link
G SLC25A25 solute carrier family 25 member 25 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21296886) Ensembl
MGI		 PMID:21296886 GO_REF:0000107 NCBI chr 1:268,531,752...268,575,195
Ensembl chr 1:268,531,752...268,576,994 		JBrowse link
G SOX8 SRY-box transcription factor 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11564878), (PMID:19286648) Ensembl
MGI		 PMID:11564878 PMID:19286648 GO_REF:0000107 NCBI chr 3:40,825,151...40,830,085
Ensembl chr 3:40,825,157...40,830,736 		JBrowse link
G SPART spartin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22619377) Ensembl
MGI		 PMID:22619377 GO_REF:0000107 NCBI chr11:12,313,211...12,346,226
Ensembl chr11:12,313,210...12,374,645 		JBrowse link
G SPTLC2 serine palmitoyltransferase long chain base subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:100,545,360...100,638,973
Ensembl chr 7:100,544,478...100,638,905 		JBrowse link
G TBL1XR1 TBL1X/Y related 1 acts_upstream_of_or_within ISO (PMID:23499424) MGI PMID:23499424 NCBI chr13:115,312,444...115,488,228
Ensembl chr13:115,312,452...115,487,284 		JBrowse link
G UBB ubiquitin B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18299572) Ensembl
MGI		 PMID:18299572 GO_REF:0000107 NCBI chr12:59,171,258...59,172,841
Ensembl chr12:59,171,289...59,172,841 		JBrowse link
G UMODL1 uromodulin like 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23190605) Ensembl
MGI		 PMID:23190605 GO_REF:0000107 NCBI chr13:205,425,338...205,494,492
Ensembl chr13:205,425,454...205,491,629 		JBrowse link
G VPS13B vacuolar protein sorting 13 homolog B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:37,085,929...37,821,159
Ensembl chr 4:37,090,936...37,820,419 		JBrowse link
G XBP1 X-box binding protein 1 involved_in ISO (MGI:5496939|PMID:23623498) UniProt PMID:23623498 MGI:5496939 NCBI chr14:46,011,239...46,016,526
Ensembl chr14:46,008,377...46,016,526 		JBrowse link
G ZNF516 zinc finger protein 516 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:147,987,660...148,100,788
Ensembl chr 1:147,984,481...148,087,719 		JBrowse link
articular cartilage development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BGN biglycan involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19932218) Ensembl
MGI		 PMID:19932218 GO_REF:0000107 NCBI chr  X:124,282,048...124,295,450
Ensembl chr  X:124,275,305...124,295,445 		JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (PMID:22359666), (PMID:22927960)
(PMID:28402956)		 MGI PMID:22359666 PMID:22927960 PMID:28402956 NCBI chr 1:31,724,290...31,796,594
Ensembl chr 1:31,722,721...31,796,595 		JBrowse link
G EPYC epiphycan involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:19932218) Ensembl
MGI
TreeGrafter
GO_Central		 PMID:19932218 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:91,837,672...91,877,779
Ensembl chr 5:91,832,291...91,877,982 		JBrowse link
G IFT80 intraflagellar transport 80 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26098911) Ensembl
MGI		 PMID:26098911 GO_REF:0000107 NCBI chr13:99,943,203...100,078,148
Ensembl chr13:99,943,208...100,078,148 		JBrowse link
G OGN osteoglycin involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 3:42,116,521...42,135,940
Ensembl chr 3:42,116,526...42,135,939 		JBrowse link
G OPTC opticin involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 9:64,211,477...64,220,982
Ensembl chr 9:64,211,477...64,220,981 		JBrowse link
G PBXIP1 PBX homeobox interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:94,837,365...94,847,652
Ensembl chr 4:94,832,270...94,847,648 		JBrowse link
bronchus cartilage development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SOX9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24218621) Ensembl
MGI		 PMID:24218621 GO_REF:0000107 NCBI chr12:8,642,154...8,647,315
Ensembl chr12:8,642,158...8,647,315 		JBrowse link
G SRF serum response factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24218621) Ensembl
MGI		 PMID:24218621 GO_REF:0000107 NCBI chr 7:38,213,300...38,223,686
Ensembl chr 7:38,213,487...38,222,144 		JBrowse link
cartilage condensation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAN aggrecan involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:3070812) Ensembl
MGI		 PMID:3070812 GO_REF:0000107 NCBI chr 7:54,449,830...54,520,606
Ensembl chr 7:54,449,816...54,519,194 		JBrowse link
G BARX2 BARX homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15800003) Ensembl
MGI		 PMID:15800003 GO_REF:0000107 NCBI chr 9:56,261,394...56,340,992
Ensembl chr 9:56,261,658...56,340,983 		JBrowse link
G BMPR1B bone morphogenetic protein receptor type 1B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10631181) Ensembl
MGI		 PMID:10631181 GO_REF:0000107 NCBI chr 8:124,536,648...125,035,841
Ensembl chr 8:124,536,653...124,759,406 		JBrowse link
G CCN2 cellular communication network factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15305294) Ensembl
MGI		 PMID:15305294 GO_REF:0000107 NCBI chr 1:31,674,398...31,677,697
Ensembl chr 1:31,674,394...31,677,691 		JBrowse link
G CHAD chondroadherin ISO RGD PMID:9461555 RGD:69806 NCBI chr12:26,741,737...26,746,364
Ensembl chr12:26,742,494...26,746,214 		JBrowse link
G COL11A1 collagen type XI alpha 1 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:3070812) Ensembl
MGI		 PMID:3070812 GO_REF:0000107 NCBI chr 4:115,638,381...115,841,679
Ensembl chr 4:115,634,172...115,840,708 		JBrowse link
G COL2A1 collagen type II alpha 1 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:3070812) Ensembl
MGI		 PMID:3070812 GO_REF:0000107 NCBI chr 5:78,350,131...78,380,893
Ensembl chr 5:78,350,137...78,380,718 		JBrowse link
G FGF4 fibroblast growth factor 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8565825) Ensembl
MGI		 PMID:8565825 GO_REF:0000107 NCBI chr 2:3,527,113...3,529,011
Ensembl chr 2:3,526,914...3,529,874 		JBrowse link
G FGF6 fibroblast growth factor 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8565825) Ensembl
MGI		 PMID:8565825 GO_REF:0000107 NCBI chr 5:65,975,807...65,990,035
Ensembl chr 5:65,975,838...65,990,029 		JBrowse link
G LOC110258854 otoraplin involved_in IEA TreeGrafter GO_REF:0000118
G MAPK14 mitogen-activated protein kinase 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:31,791,398...31,861,544
Ensembl chr 7:31,790,877...31,862,031 		JBrowse link
G MYCN MYCN proto-oncogene, bHLH transcription factor acts_upstream_of_or_within ISO (PMID:17360777) MGI PMID:17360777 NCBI chr 3:121,543,201...121,549,678
Ensembl chr 3:121,543,109...121,549,046 		JBrowse link
G MYF5 myogenic factor 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8565825) Ensembl
MGI		 PMID:8565825 GO_REF:0000107 NCBI chr 5:100,753,440...100,755,558
Ensembl chr 5:100,752,890...100,755,494 		JBrowse link
G OTOR otoraplin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10998416) TreeGrafter
MGI		 PMID:10998416 GO_REF:0000118 NCBI chr17:25,380,179...25,383,521 JBrowse link
G PKD1 polycystin 1, transient receptor potential channel interacting involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11593033) Ensembl
MGI		 PMID:11593033 GO_REF:0000107 NCBI chr 3:39,849,579...39,899,455
Ensembl chr 3:39,849,609...39,899,455 		JBrowse link
G ROR2 receptor tyrosine kinase like orphan receptor 2 acts_upstream_of_or_within ISO (PMID:14745966) MGI PMID:14745966 NCBI chr14:2,803,840...3,035,384
Ensembl chr14:2,804,061...3,035,296 		JBrowse link
G SOX5 SRY-box transcription factor 5 involved_in ISO (MGI:2446758|PMID:11702786), (MGI:3037234|PMID:14993235) UniProt PMID:11702786 PMID:14993235 MGI:2446758 MGI:3037234 NCBI chr 5:49,159,950...50,166,463
Ensembl chr 5:49,504,551...50,161,558 		JBrowse link
G SOX6 SRY-box transcription factor 6 involved_in ISO (MGI:2446758|PMID:11702786), (MGI:3037234|PMID:14993235) UniProt PMID:11702786 PMID:14993235 MGI:2446758 MGI:3037234 NCBI chr 2:42,447,391...43,068,824
Ensembl chr 2:42,453,681...43,068,325 		JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within		 ISS
ISO
IEA		 (PMID:10319868)
(PMID:12414734)		 UniProt
MGI
Ensembl		 PMID:10319868 PMID:12414734 GO_REF:0000024 GO_REF:0000107 NCBI chr12:8,642,154...8,647,315
Ensembl chr12:8,642,158...8,647,315 		JBrowse link
G TGFB2 transforming growth factor beta 2 acts_upstream_of_or_within ISO (PMID:8565825) MGI PMID:8565825 NCBI chr10:8,306,136...8,435,307
Ensembl chr10:8,305,539...8,390,341 		JBrowse link
G THRA thyroid hormone receptor alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9250685) Ensembl
MGI		 PMID:9250685 GO_REF:0000107 NCBI chr12:22,270,506...22,296,684
Ensembl chr12:22,270,062...22,296,618 		JBrowse link
G UNCX UNC homeobox involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10804168)
(PMID:10804169)		 Ensembl
MGI		 PMID:10804168 PMID:10804169 GO_REF:0000107 NCBI chr 3:804,188...808,574
Ensembl chr 3:804,113...808,187 		JBrowse link
G WNT7A Wnt family member 7A involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:70,538,802...70,602,464
Ensembl chr13:70,538,894...70,602,454 		JBrowse link
cartilage development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP7A ATPase copper transporting alpha acts_upstream_of_or_within ISO (PMID:8895222) MGI PMID:8895222 NCBI chr  X:61,972,544...62,110,058
Ensembl chr  X:61,972,991...62,110,048 		JBrowse link
G BBS1 Bardet-Biedl syndrome 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19195025) Ensembl
MGI		 PMID:19195025 GO_REF:0000107 NCBI chr 2:5,886,989...5,906,468
Ensembl chr 2:5,886,990...5,906,388 		JBrowse link
G BBS2 Bardet-Biedl syndrome 2 acts_upstream_of_or_within ISO (PMID:19195025) MGI PMID:19195025 NCBI chr 6:18,542,383...18,575,338
Ensembl chr 6:18,542,386...18,575,514 		JBrowse link
G BMP2 bone morphogenetic protein 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr17:15,750,487...15,762,982
Ensembl chr17:15,749,835...15,761,195 		JBrowse link
G BMP4 bone morphogenetic protein 4 involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:183,415,989...183,422,888
Ensembl chr 1:183,416,146...183,422,637 		JBrowse link
G BMPR1A bone morphogenetic protein receptor type 1A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15492776) Ensembl
MGI		 PMID:15492776 GO_REF:0000107 NCBI chr14:87,743,270...87,891,790
Ensembl chr14:87,742,459...87,891,790 		JBrowse link
G CD44 CD44 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:25,788,699...25,884,209
Ensembl chr 2:25,788,703...25,884,153 		JBrowse link
G CFH complement factor H acts_upstream_of_or_within ISO (PMID:19828624) MGI PMID:19828624
G CHST11 carbohydrate sulfotransferase 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16079159) Ensembl
MGI		 PMID:16079159 GO_REF:0000107 NCBI chr 5:79,788,558...80,068,903
Ensembl chr 5:79,788,572...80,067,795 		JBrowse link
G CHSY1 chondroitin sulfate synthase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22280990) Ensembl
MGI		 PMID:22280990 GO_REF:0000107 NCBI chr 1:139,730,703...139,804,458
Ensembl chr 1:139,730,721...139,804,657 		JBrowse link
G CNMD chondromodulin involved_in IEA UniProt GO_REF:0000043 NCBI chr11:25,959,192...25,994,773
Ensembl chr11:25,961,926...25,994,651 		JBrowse link
G COL10A1 collagen type X alpha 1 chain ISO RGD PMID:10853827 RGD:704421 NCBI chr 1:81,766,829...81,773,818
Ensembl chr 1:81,765,859...81,773,818 		JBrowse link
G COL11A1 collagen type XI alpha 1 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:4100752), (PMID:4110409), (PMID:7859283), (PMID:886247) Ensembl
MGI		 PMID:886247 PMID:4100752 PMID:4110409 PMID:7859283 GO_REF:0000107 MGI:60257 NCBI chr 4:115,638,381...115,841,679
Ensembl chr 4:115,634,172...115,840,708 		JBrowse link
G COL11A2 collagen type XI alpha 2 chain involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:25,204,496...25,234,880
Ensembl chr 7:25,204,497...25,234,888 		JBrowse link
G COL2A1 collagen type II alpha 1 chain acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:7276808), (PMID:9165353)
(PMID:11171689), (PMID:11680679), (PMID:7590256), (PMID:9832566)
(PMID:10100048), (PMID:9061443)		 RGD
MGI
Ensembl		 PMID:7276808 PMID:7590256 PMID:9061443 PMID:9165353 PMID:9822201 More... GO_REF:0000107 RGD:70694 NCBI chr 5:78,350,131...78,380,893
Ensembl chr 5:78,350,137...78,380,718 		JBrowse link
G COL3A1 collagen type III alpha 1 chain involved_in ISO (PMID:31655293) MGI PMID:31655293 NCBI chr15:93,556,914...93,595,678
Ensembl chr15:93,526,603...93,596,363 		JBrowse link
G COL9A1 collagen type IX alpha 1 chain acts_upstream_of_or_within ISO (PMID:18191556)
(PMID:11680679)		 MGI PMID:11680679 PMID:18191556 NCBI chr 1:50,403,355...50,498,356
Ensembl chr 1:50,403,361...50,498,332 		JBrowse link
G COMP cartilage oligomeric matrix protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18191556)
(PMID:23951406)
(PMID:17588960)		 Ensembl
MGI		 PMID:17588960 PMID:18191556 PMID:23951406 GO_REF:0000107 NCBI chr 2:59,061,409...59,068,951
Ensembl chr 2:59,061,426...59,069,564 		JBrowse link
G CREB3L2 cAMP responsive element binding protein 3 like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:11,533,184...11,666,132
Ensembl chr18:11,533,183...11,666,113 		JBrowse link
G CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 acts_upstream_of_or_within ISO (PMID:20812917) MGI PMID:20812917 NCBI chr17:12,145,141...12,498,777
Ensembl chr17:12,428,893...12,498,585 		JBrowse link
G DDRGK1 DDRGK domain containing 1 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr17:32,479,981...32,491,401
Ensembl chr17:32,479,977...32,491,396 		JBrowse link
G DICER1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (PMID:21098571) MGI PMID:21098571 NCBI chr 7:116,361,630...116,436,471
Ensembl chr 7:116,365,802...116,411,224 		JBrowse link
G DLX2 distal-less homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7590232) Ensembl
MGI		 PMID:7590232 GO_REF:0000107 NCBI chr15:78,200,696...78,204,264
Ensembl chr15:78,200,916...78,204,112 		JBrowse link
G DSPP dentin sialophosphoprotein ISO femoral head RGD PMID:20679519 RGD:12914771 NCBI chr 8:131,318,187...131,444,274
Ensembl chr 8:131,319,983...131,472,761 		JBrowse link
G EDN1 endothelin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8152482) Ensembl
MGI		 PMID:8152482 GO_REF:0000107 NCBI chr 7:8,752,018...8,758,354
Ensembl chr 7:8,751,695...8,758,348 		JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (PMID:15625282), (PMID:25260930)
(PMID:24770645)		 MGI PMID:15625282 PMID:24770645 PMID:25260930 NCBI chr 1:31,724,290...31,796,594
Ensembl chr 1:31,722,721...31,796,595 		JBrowse link
G ERRFI1 ERBB receptor feedback inhibitor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24550287) Ensembl
MGI		 PMID:24550287 GO_REF:0000107 NCBI chr 6:68,667,651...68,682,629
Ensembl chr 6:68,669,153...68,682,623 		JBrowse link
G ESRRA estrogen related receptor alpha ISO RGD PMID:17170100 RGD:1625657 NCBI chr 2:7,803,504...7,812,868
Ensembl chr 2:7,803,510...7,813,098 		JBrowse link
G EVC EvC ciliary complex subunit 1 ISO RGD PMID:15278943 RGD:1598913 NCBI chr 8:4,808,622...4,891,236
Ensembl chr 8:4,810,093...4,891,165 		JBrowse link
G FBXW4 F-box and WD repeat domain containing 4 acts_upstream_of_or_within ISO (PMID:9733575) MGI PMID:9733575 NCBI chr14:112,628,988...112,736,631
Ensembl chr14:112,638,204...112,736,056 		JBrowse link
G FGFR3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO (PMID:15781473) MGI PMID:15781473 NCBI chr 8:879,151...894,968
Ensembl chr 8:879,159...894,964 		JBrowse link
G FOSL2 FOS like 2, AP-1 transcription factor subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15509771) Ensembl
MGI		 PMID:15509771 GO_REF:0000107 NCBI chr 3:110,820,403...110,842,903
Ensembl chr 3:110,823,666...110,843,068 		JBrowse link
G GATA3 GATA binding protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:63,367,684...63,397,977
Ensembl chr10:63,367,663...63,388,859 		JBrowse link
G GNAS GNAS complex locus involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15797856) Ensembl
MGI		 PMID:15797856 GO_REF:0000107 NCBI chr17:58,985,580...59,053,022
Ensembl chr17:58,998,981...59,053,021 		JBrowse link
G HES5 hes family bHLH transcription factor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:64,409,110...64,410,541
Ensembl chr 6:64,408,956...64,410,881 		JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11691837) Ensembl
MGI		 PMID:11691837 GO_REF:0000107 NCBI chr 1:190,625,436...190,673,926
Ensembl chr 1:190,625,244...190,674,845 		JBrowse link
G HOXA3 homeobox A3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9441667) Ensembl
MGI		 PMID:9441667 GO_REF:0000107 NCBI chr18:45,421,542...45,467,803
Ensembl chr18:45,454,213...45,466,537 		JBrowse link
G HOXB3 homeobox B3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9441667) Ensembl
MGI		 PMID:9441667 GO_REF:0000107 NCBI chr12:24,803,119...24,827,557
Ensembl chr12:24,804,647...24,809,937 		JBrowse link
G HOXC4 homeobox C4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8626021) Ensembl
MGI		 PMID:8626021 GO_REF:0000107 NCBI chr 5:19,250,411...19,268,267
Ensembl chr 5:19,265,081...19,268,257 		JBrowse link
G HOXD3 homeobox D3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9441667) Ensembl
MGI		 PMID:9441667 GO_REF:0000107 NCBI chr15:81,969,482...81,974,893
Ensembl chr15:81,958,701...81,973,673 		JBrowse link
G HYAL1 hyaluronidase 1 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr13:32,798,135...32,800,705
Ensembl chr13:32,797,681...32,800,793 		JBrowse link
G HYAL2 hyaluronidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:32,805,220...32,813,684
Ensembl chr13:32,805,227...32,815,333 		JBrowse link
G HYAL3 hyaluronidase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:32,790,843...32,796,995
Ensembl chr13:32,790,850...32,796,563 		JBrowse link
G IFT80 intraflagellar transport 80 acts_upstream_of_or_within ISO (PMID:32227389) MGI PMID:32227389 NCBI chr13:99,943,203...100,078,148
Ensembl chr13:99,943,208...100,078,148 		JBrowse link
G IHH Indian hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17191253) Ensembl
MGI		 PMID:17191253 GO_REF:0000107 NCBI chr15:121,083,750...121,090,548
Ensembl chr15:121,083,753...121,090,121 		JBrowse link
G IL17F interleukin 17F involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:46,058,371...46,066,039
Ensembl chr 7:46,059,002...46,077,048 		JBrowse link
G ITGB8 integrin subunit beta 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:89,342,245...89,450,701
Ensembl chr 9:89,341,162...89,448,665 		JBrowse link
G LOC100623720 collagen alpha-1(VI) chain acts_upstream_of_or_within ISO (PMID:19248115), (PMID:22448243) MGI PMID:19248115 PMID:22448243 NCBI chr13:208,295,245...208,321,789
Ensembl chr13:208,295,451...208,313,127 		JBrowse link
G LUM lumican ISO RGD PMID:19746167 RGD:2317685 NCBI chr 5:91,748,871...91,756,381
Ensembl chr 5:91,748,885...91,757,598 		JBrowse link
G MAPK3 mitogen-activated protein kinase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17644814) Ensembl
MGI		 PMID:17644814 GO_REF:0000107 NCBI chr 3:18,291,444...18,299,410
Ensembl chr 3:18,291,445...18,299,567 		JBrowse link
G MATN3 matrilin 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23951406) Ensembl
MGI		 PMID:23951406 GO_REF:0000107 NCBI chr 3:118,185,928...118,206,465
Ensembl chr 3:118,185,975...118,205,558 		JBrowse link
G MGP matrix Gla protein involved_in IEA UniProt GO_REF:0000043 NCBI chr 5:57,665,272...57,669,360
Ensembl chr 5:57,665,248...57,669,764 		JBrowse link
G MIR140 microRNA mir-140 acts_upstream_of_or_within ISO (PMID:20466812) MGI PMID:20466812 NCBI chr 6:17,077,530...17,077,599
Ensembl chr 6:17,077,507...17,077,620 		JBrowse link
G MKKS MKKS centrosomal shuttling protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19195025) Ensembl
MGI		 PMID:19195025 GO_REF:0000107 NCBI chr17:19,341,024...19,363,007
Ensembl chr17:19,341,636...19,362,871 		JBrowse link
G MSX1 msh homeobox 1 ISO RGD PMID:10332146 RGD:1600462 NCBI chr 8:5,628,381...5,632,375
Ensembl chr 8:5,628,380...5,632,607 		JBrowse link
G MSX2 msh homeobox 2 acts_upstream_of_or_within ISO (PMID:11668602)
(PMID:10742104)		 RGD
MGI		 PMID:10332146 PMID:10742104 PMID:11668602 RGD:1600462 NCBI chr16:49,765,587...49,771,745
Ensembl chr16:49,765,910...49,771,789 		JBrowse link
G NFATC2 nuclear factor of activated T cells 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:52,743,570...52,907,373
Ensembl chr17:52,743,568...52,906,821 		JBrowse link
G NFIA nuclear factor I A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:150,834,002...151,229,773
Ensembl chr 6:150,835,494...151,426,749 		JBrowse link
G NOG noggin involved_in
acts_upstream_of		 IEA
ISO		 (PMID:10684250) UniProt
MGI
Ensembl		 PMID:10684250 GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 NCBI chr12:32,891,321...32,892,206
Ensembl chr12:32,891,321...32,892,206 		JBrowse link
G NPR2 natriuretic peptide receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:236,508,994...236,529,172
Ensembl chr 1:236,508,998...236,529,128 		JBrowse link
G PAX7 paired box 7 acts_upstream_of_or_within ISO (PMID:8631261) MGI PMID:8631261 NCBI chr 6:77,160,827...77,268,626
Ensembl chr 6:77,161,097...77,267,415 		JBrowse link
G PITX1 paired like homeodomain 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10101115) Ensembl
MGI		 PMID:10101115 GO_REF:0000107 NCBI chr 2:137,200,424...137,212,500
Ensembl chr 2:137,200,423...137,206,979 		JBrowse link
G PKD1 polycystin 1, transient receptor potential channel interacting involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:39,849,579...39,899,455
Ensembl chr 3:39,849,609...39,899,455 		JBrowse link
G PRRX1 paired related homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9876178)
(PMID:7758948)		 Ensembl
MGI		 PMID:7758948 PMID:9876178 GO_REF:0000107 NCBI chr 4:80,427,682...80,502,689
Ensembl chr 4:80,427,687...80,501,646 		JBrowse link
G PRRX2 paired related homeobox 2 acts_upstream_of_or_within ISO (PMID:9876178) MGI PMID:9876178 NCBI chr 1:269,853,134...269,902,808
Ensembl chr 1:269,853,200...269,903,469 		JBrowse link
G SATB2 SATB homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16751105) Ensembl
MGI		 PMID:16751105 GO_REF:0000107 NCBI chr15:102,962,635...103,172,224
Ensembl chr15:102,964,417...103,158,232 		JBrowse link
G SFRP2 secreted frizzled related protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18729207) Ensembl
MGI		 PMID:18729207 GO_REF:0000107 NCBI chr 8:75,337,311...75,345,926
Ensembl chr 8:75,337,144...75,345,921 		JBrowse link
G SMAD1 SMAD family member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19224984) Ensembl
MGI		 PMID:19224984 GO_REF:0000107 NCBI chr 8:82,907,557...82,987,909
Ensembl chr 8:82,908,527...82,968,994 		JBrowse link
G SMAD5 SMAD family member 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19224984) Ensembl
MGI		 PMID:19224984 GO_REF:0000107 NCBI chr 2:138,287,635...138,344,092
Ensembl chr 2:138,287,710...138,344,762 		JBrowse link
G SMAD9 SMAD family member 9 acts_upstream_of_or_within ISO (PMID:19224984) MGI PMID:19224984 NCBI chr11:12,705,652...12,727,981
Ensembl chr11:12,705,368...12,763,008 		JBrowse link
G SMPD3 sphingomyelin phosphodiesterase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27325675)
(PMID:17591962)		 Ensembl
MGI		 PMID:17591962 PMID:27325675 GO_REF:0000107 NCBI chr 6:28,938,287...29,025,397
Ensembl chr 6:28,938,290...29,025,357 		JBrowse link
G SNORC secondary ossification center associated regulator of chondrocyte maturation involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr15:133,323,562...133,330,253
Ensembl chr15:133,323,562...133,330,253 		JBrowse link
G SOX5 SRY-box transcription factor 5 involved_in
acts_upstream_of_or_within		 ISO (MGI:6414706|PMID:15529345)
(PMID:15634692)
(MGI:5780653|PMID:26150426)		 UniProt
MGI		 PMID:15529345 PMID:15634692 PMID:26150426 MGI:5780653 MGI:6414706 NCBI chr 5:49,159,950...50,166,463
Ensembl chr 5:49,504,551...50,161,558 		JBrowse link
G SOX6 SRY-box transcription factor 6 involved_in
acts_upstream_of_or_within		 ISO (MGI:5780653|PMID:26150426)
(PMID:15634692)
(MGI:6414706|PMID:15529345)		 UniProt
MGI		 PMID:15529345 PMID:15634692 PMID:26150426 MGI:5780653 MGI:6414706 NCBI chr 2:42,447,391...43,068,824
Ensembl chr 2:42,453,681...43,068,325 		JBrowse link
G SOX9 SRY-box transcription factor 9 acts_upstream_of
acts_upstream_of_or_within
involved_in		 ISO
IEA
ISS		 (PMID:19047045)
(PMID:11371614)		 RGD
MGI
Ensembl
UniProt		 PMID:11371614 PMID:15512770 PMID:19047045 GO_REF:0000024 GO_REF:0000107 RGD:1599098 NCBI chr12:8,642,154...8,647,315
Ensembl chr12:8,642,158...8,647,315 		JBrowse link
G SULF1 sulfatase 1 involved_in IEA UniProt
Ensembl		 GO_REF:0000104 GO_REF:0000107 NCBI chr 4:65,595,947...65,778,889
Ensembl chr 4:65,595,951...65,778,884 		JBrowse link
G SULF2 sulfatase 2 involved_in IEA UniProt
Ensembl		 GO_REF:0000104 GO_REF:0000107 NCBI chr17:49,663,721...49,805,118
Ensembl chr17:49,663,731...49,804,577 		JBrowse link
G TAPT1 transmembrane anterior posterior transformation 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 8:11,365,423...11,415,699
Ensembl chr 8:11,365,432...11,416,488 		JBrowse link
G TGFBR2 transforming growth factor beta receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:16,784,370...16,875,828
Ensembl chr13:16,784,490...16,878,160 		JBrowse link
G TIMP1 TIMP metallopeptidase inhibitor 1 ISO RGD PMID:16208432 RGD:8694091 NCBI chr  X:42,103,251...42,106,289
Ensembl chr  X:42,102,172...42,106,296 		JBrowse link
G TRIP11 thyroid hormone receptor interactor 11 involved_in ISO (PMID:30728324) UniProt PMID:30728324 NCBI chr 7:113,524,406...113,600,411
Ensembl chr 7:113,524,430...113,600,088 		JBrowse link
G TYMS thymidylate synthetase ISO RGD PMID:3471366 RGD:2317423 NCBI chr 6:105,642,730...105,660,279
Ensembl chr 6:105,642,381...105,660,578 		JBrowse link
G WNT7A Wnt family member 7A involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:70,538,802...70,602,464
Ensembl chr13:70,538,894...70,602,454 		JBrowse link
G WNT9A Wnt family member 9A acts_upstream_of ISO (PMID:19047045) MGI PMID:19047045 NCBI chr 2:51,102,757...51,128,346
Ensembl chr 2:51,102,763...51,128,346 		JBrowse link
G ZBTB16 zinc finger and BTB domain containing 16 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:41,639,536...41,839,254
Ensembl chr 9:41,639,701...41,836,742 		JBrowse link
G ZEB1 zinc finger E-box binding homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9389660) Ensembl
MGI		 PMID:9389660 GO_REF:0000107 NCBI chr10:42,013,114...42,216,139
Ensembl chr10:42,013,084...42,214,205 		JBrowse link
cartilage development involved in endochondral bone morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBS cystathionine beta-synthase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15622513) Ensembl
MGI		 PMID:15622513 GO_REF:0000107 NCBI chr13:206,205,942...206,231,363
Ensembl chr13:206,205,946...206,230,248 		JBrowse link
G COL1A1 collagen type I alpha 1 chain acts_upstream_of_or_within ISO (PMID:18248096) MGI PMID:18248096 NCBI chr12:26,379,087...26,397,180
Ensembl chr12:26,379,090...26,397,004 		JBrowse link
G COL2A1 collagen type II alpha 1 chain acts_upstream_of_or_within
involved_in		 ISO
IEA		 mandibular condylar cartilage
(PMID:11680679)
(PMID:9022054)
(PMID:8989518)		 RGD
MGI
Ensembl		 PMID:8989518 PMID:9022054 PMID:11680679 PMID:12924823 GO_REF:0000107 RGD:8661659 NCBI chr 5:78,350,131...78,380,893
Ensembl chr 5:78,350,137...78,380,718 		JBrowse link
G EXT1 exostosin glycosyltransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21185280), (PMID:23958822) Ensembl
MGI		 PMID:21185280 PMID:23958822 GO_REF:0000107 NCBI chr 4:20,645,002...20,935,769
Ensembl chr 4:20,645,610...20,935,540 		JBrowse link
G GHR growth hormone receptor ISO RGD PMID:15749813 RGD:2307373 NCBI chr16:27,126,300...27,422,618
Ensembl chr16:27,126,734...27,421,449 		JBrowse link
G HOXA11 homeobox A11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14668414) Ensembl
MGI		 PMID:14668414 GO_REF:0000107 NCBI chr18:45,388,523...45,392,190
Ensembl chr18:45,388,375...45,391,953 		JBrowse link
G HOXD11 homeobox D11 acts_upstream_of_or_within ISO (PMID:14668414) MGI PMID:14668414 NCBI chr15:81,906,654...81,910,765
Ensembl chr15:81,908,460...81,911,282 		JBrowse link
G HSPG2 heparan sulfate proteoglycan 2 acts_upstream_of_or_within ISO (PMID:10545953) MGI PMID:10545953 NCBI chr 6:79,849,691...79,958,283
Ensembl chr 6:79,849,698...79,958,334 		JBrowse link
G SHOX2 SHOX homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16537395) Ensembl
MGI		 PMID:16537395 GO_REF:0000107 NCBI chr13:97,879,586...97,892,276
Ensembl chr13:97,879,281...97,889,785 		JBrowse link
G SIK3 SIK family kinase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22318228) Ensembl
MGI		 PMID:22318228 GO_REF:0000107 NCBI chr 9:44,223,227...44,471,689
Ensembl chr 9:44,223,232...44,513,831 		JBrowse link
G TRPV4 transient receptor potential cation channel subfamily V member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:41,125,819...41,169,582
Ensembl chr14:41,125,869...41,169,578 		JBrowse link
cartilage morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HAND1 heart and neural crest derivatives expressed 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17764670) Ensembl
MGI		 PMID:17764670 GO_REF:0000107 NCBI chr16:68,679,977...68,683,346
Ensembl chr16:68,677,963...68,683,342 		JBrowse link
G HAND2 heart and neural crest derivatives expressed 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17764670) Ensembl
MGI		 PMID:17764670 GO_REF:0000107 NCBI chr14:16,460,089...16,462,979
Ensembl chr14:16,459,971...16,462,207 		JBrowse link
G HOXA5 homeobox A5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9441679) Ensembl
MGI		 PMID:9441679 GO_REF:0000107 NCBI chr18:45,429,691...45,432,723
Ensembl chr18:45,421,663...45,432,885 		JBrowse link
G MEF2C myocyte enhancer factor 2C acts_upstream_of_or_within ISO (PMID:17420000) MGI PMID:17420000 NCBI chr 2:96,122,407...96,296,927
Ensembl chr 2:96,124,168...96,296,810 		JBrowse link
G MSX1 msh homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12489152) Ensembl
MGI		 PMID:12489152 GO_REF:0000107 NCBI chr 8:5,628,381...5,632,375
Ensembl chr 8:5,628,380...5,632,607 		JBrowse link
G SNAI1 snail family transcriptional repressor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17376812) Ensembl
MGI		 PMID:17376812 GO_REF:0000107 NCBI chr17:51,546,446...51,552,498
Ensembl chr17:51,546,477...51,552,499 		JBrowse link
G SNAI2 snail family transcriptional repressor 2 acts_upstream_of_or_within ISO (PMID:17376812) MGI PMID:17376812 NCBI chr 4:79,264,880...79,268,475
Ensembl chr 4:79,264,880...79,268,475 		JBrowse link
chondroblast differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAN aggrecan ISO RGD PMID:20001227 RGD:2315747 NCBI chr 7:54,449,830...54,520,606
Ensembl chr 7:54,449,816...54,519,194 		JBrowse link
G CCN1 cellular communication network factor 1 involved_in
acts_upstream_of
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9441684) Ensembl
MGI		 PMID:9441684 GO_REF:0000107 NCBI chr 4:130,392,404...130,395,179
Ensembl chr 4:130,392,407...130,395,150 		JBrowse link
G FGF2 fibroblast growth factor 2 involved_in ISO (PMID:17167778) UniProt PMID:17167778 NCBI chr 8:101,278,877...101,344,084
Ensembl chr 8:101,278,885...101,343,916 		JBrowse link
G FGF4 fibroblast growth factor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:3,527,113...3,529,011
Ensembl chr 2:3,526,914...3,529,874 		JBrowse link
G GDF5 growth differentiation factor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:38,792,854...38,796,806
Ensembl chr17:38,792,187...38,797,005 		JBrowse link
G RARA retinoic acid receptor alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10684250) Ensembl
MGI		 PMID:10684250 GO_REF:0000107 NCBI chr12:22,047,449...22,085,759
Ensembl chr12:22,047,443...22,085,673 		JBrowse link
chondrocyte development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAN aggrecan involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9664687) Ensembl
MGI		 PMID:9664687 GO_REF:0000107 NCBI chr 7:54,449,830...54,520,606
Ensembl chr 7:54,449,816...54,519,194 		JBrowse link
G BMPR1B bone morphogenetic protein receptor type 1B involved_in ISS AgBase GO_REF:0000024 NCBI chr 8:124,536,648...125,035,841
Ensembl chr 8:124,536,653...124,759,406 		JBrowse link
G BMPR2 bone morphogenetic protein receptor type 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:105,971,577...106,132,496
Ensembl chr15:105,970,428...106,135,730 		JBrowse link
G BPNT2 3'(2'), 5'-bisphosphate nucleotidase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18539921) Ensembl
MGI		 PMID:18539921 GO_REF:0000107 NCBI chr 4:75,191,256...75,210,988
Ensembl chr 4:75,191,257...75,215,906 		JBrowse link
G CHST11 carbohydrate sulfotransferase 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16079159) Ensembl
MGI		 PMID:16079159 GO_REF:0000107 NCBI chr 5:79,788,558...80,068,903
Ensembl chr 5:79,788,572...80,067,795 		JBrowse link
G CHSY1 chondroitin sulfate synthase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22280990) Ensembl
MGI		 PMID:22280990 GO_REF:0000107 NCBI chr 1:139,730,703...139,804,458
Ensembl chr 1:139,730,721...139,804,657 		JBrowse link
G COL11A1 collagen type XI alpha 1 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:4100752) Ensembl
MGI		 PMID:4100752 GO_REF:0000107 NCBI chr 4:115,638,381...115,841,679
Ensembl chr 4:115,634,172...115,840,708 		JBrowse link
G COMP cartilage oligomeric matrix protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22006726)
(PMID:17588960)		 Ensembl
MGI		 PMID:17588960 PMID:22006726 GO_REF:0000107 NCBI chr 2:59,061,409...59,068,951
Ensembl chr 2:59,061,426...59,069,564 		JBrowse link
G ECM1 extracellular matrix protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20138147) Ensembl
MGI		 PMID:20138147 GO_REF:0000107 NCBI chr 4:98,615,776...98,633,081
Ensembl chr 4:98,615,778...98,621,836 		JBrowse link
G EIF2AK3 eukaryotic translation initiation factor 2 alpha kinase 3 acts_upstream_of_or_within ISO (PMID:12865332) MGI PMID:12865332 NCBI chr 3:57,423,894...57,506,247
Ensembl chr 3:57,423,943...57,506,245 		JBrowse link
G FGF18 fibroblast growth factor 18 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17014841) Ensembl
MGI		 PMID:17014841 GO_REF:0000107 NCBI chr16:52,724,867...52,760,246
Ensembl chr16:52,725,356...52,759,791 		JBrowse link
G HOXA11 homeobox A11 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:14668414) Ensembl
MGI		 PMID:14668414 GO_REF:0000107 NCBI chr18:45,388,523...45,392,190
Ensembl chr18:45,388,375...45,391,953 		JBrowse link
G HOXD11 homeobox D11 acts_upstream_of ISO (PMID:14668414) MGI PMID:14668414 NCBI chr15:81,906,654...81,910,765
Ensembl chr15:81,908,460...81,911,282 		JBrowse link
G MIA3 MIA SH3 domain ER export factor 3 acts_upstream_of_or_within ISO (PMID:21606205) MGI PMID:21606205 NCBI chr10:11,362,489...11,428,844
Ensembl chr10:11,377,846...11,429,015 		JBrowse link
G MSX2 msh homeobox 2 acts_upstream_of_or_within ISO (PMID:10742104) MGI PMID:10742104 NCBI chr16:49,765,587...49,771,745
Ensembl chr16:49,765,910...49,771,789 		JBrowse link
G RARG retinoic acid receptor gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:18,436,267...18,458,625
Ensembl chr 5:18,436,270...18,458,624 		JBrowse link
G RUNX2 RUNX family transcription factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10213384) Ensembl
MGI		 PMID:10213384 GO_REF:0000107 NCBI chr 7:40,106,581...40,353,304
Ensembl chr 7:40,106,532...40,460,687 		JBrowse link
G SFRP2 secreted frizzled related protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18729207) Ensembl
MGI		 PMID:18729207 GO_REF:0000107 NCBI chr 8:75,337,311...75,345,926
Ensembl chr 8:75,337,144...75,345,921 		JBrowse link
G SHOX2 SHOX homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17481601) Ensembl
MGI		 PMID:17481601 GO_REF:0000107 NCBI chr13:97,879,586...97,892,276
Ensembl chr13:97,879,281...97,889,785 		JBrowse link
G SMPD3 sphingomyelin phosphodiesterase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24505141)
(PMID:17591962)		 Ensembl
MGI		 PMID:17591962 PMID:24505141 GO_REF:0000107 NCBI chr 6:28,938,287...29,025,397
Ensembl chr 6:28,938,290...29,025,357 		JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18415932) Ensembl
MGI		 PMID:18415932 GO_REF:0000107 NCBI chr12:8,642,154...8,647,315
Ensembl chr12:8,642,158...8,647,315 		JBrowse link
G SULF1 sulfatase 1 involved_in IEA UniProt
Ensembl		 GO_REF:0000104 GO_REF:0000107 NCBI chr 4:65,595,947...65,778,889
Ensembl chr 4:65,595,951...65,778,884 		JBrowse link
G SULF2 sulfatase 2 involved_in IEA UniProt
Ensembl		 GO_REF:0000104 GO_REF:0000107 NCBI chr17:49,663,721...49,805,118
Ensembl chr17:49,663,731...49,804,577 		JBrowse link
chondrocyte development involved in endochondral bone morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SERPINH1 serpin family H member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22492985) Ensembl
MGI		 PMID:22492985 GO_REF:0000107 NCBI chr 9:9,782,939...9,794,485
Ensembl chr 9:9,783,042...9,794,483 		JBrowse link
G SMPD3 sphingomyelin phosphodiesterase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21788370) Ensembl
MGI		 PMID:21788370 GO_REF:0000107 NCBI chr 6:28,938,287...29,025,397
Ensembl chr 6:28,938,290...29,025,357 		JBrowse link
chondrocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAMTS12 ADAM metallopeptidase with thrombospondin type 1 motif 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:19,547,003...19,920,780
Ensembl chr16:19,547,011...19,920,513 		JBrowse link
G ADAMTS7 ADAM metallopeptidase with thrombospondin type 1 motif 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:47,919,398...47,994,528
Ensembl chr 7:47,929,033...47,994,453 		JBrowse link
G ARID5A AT-rich interaction domain 5A acts_upstream_of_or_within ISO (PMID:21346191) MGI PMID:21346191 NCBI chr 3:46,701,628...46,714,121
Ensembl chr 3:46,701,632...46,714,113 		JBrowse link
G BMP2 bone morphogenetic protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:15,750,487...15,762,982
Ensembl chr17:15,749,835...15,761,195 		JBrowse link
G BMP4 bone morphogenetic protein 4 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:17481601) Ensembl
MGI		 PMID:17481601 GO_REF:0000107 NCBI chr 1:183,415,989...183,422,888
Ensembl chr 1:183,416,146...183,422,637 		JBrowse link
G BMPR1A bone morphogenetic protein receptor type 1A involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:87,743,270...87,891,790
Ensembl chr14:87,742,459...87,891,790 		JBrowse link
G BMPR1B bone morphogenetic protein receptor type 1B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18363966) Ensembl
MGI		 PMID:18363966 GO_REF:0000107 NCBI chr 8:124,536,648...125,035,841
Ensembl chr 8:124,536,653...124,759,406 		JBrowse link
G CCN2 cellular communication network factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15305294) Ensembl
MGI		 PMID:15305294 GO_REF:0000107 NCBI chr 1:31,674,398...31,677,697
Ensembl chr 1:31,674,394...31,677,691 		JBrowse link
G CCN3 cellular communication network factor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:19,505,698...19,514,481
Ensembl chr 4:19,505,701...19,514,406 		JBrowse link
G CHRDL2 chordin like 2 acts_upstream_of_or_within ISO (PMID:14660436) MGI PMID:14660436 NCBI chr 9:9,017,691...9,053,527
Ensembl chr 9:9,017,690...9,053,554 		JBrowse link
G COL11A2 collagen type XI alpha 2 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11668593) Ensembl
MGI		 PMID:11668593 GO_REF:0000107 NCBI chr 7:25,204,496...25,234,880
Ensembl chr 7:25,204,497...25,234,888 		JBrowse link
G COL2A1 collagen type II alpha 1 chain acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:11680679), (PMID:7590256) RGD
MGI
Ensembl		 PMID:7590256 PMID:11680679 PMID:21627568 GO_REF:0000107 RGD:5134342 NCBI chr 5:78,350,131...78,380,893
Ensembl chr 5:78,350,137...78,380,718 		JBrowse link
G COL3A1 collagen type III alpha 1 chain involved_in ISO (PMID:31655293) MGI PMID:31655293 NCBI chr15:93,556,914...93,595,678
Ensembl chr15:93,526,603...93,596,363 		JBrowse link
G COL9A1 collagen type IX alpha 1 chain ISO RGD PMID:8992886 RGD:1600950 NCBI chr 1:50,403,355...50,498,356
Ensembl chr 1:50,403,361...50,498,332 		JBrowse link
G CREB3L2 cAMP responsive element binding protein 3 like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:11,533,184...11,666,132
Ensembl chr18:11,533,183...11,666,113 		JBrowse link
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:15866163)
(PMID:16818445)		 Ensembl
MGI		 PMID:15866163 PMID:16818445 GO_REF:0000107 NCBI chr13:25,163,550...25,208,314
Ensembl chr13:25,164,277...25,208,311 		JBrowse link
G CYTL1 cytokine like 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17644814) Ensembl
MGI		 PMID:17644814 GO_REF:0000107 NCBI chr 8:5,455,576...5,460,861
Ensembl chr 8:5,455,671...5,460,861 		JBrowse link
G DLL4 delta like canonical Notch ligand 4 ISO RGD PMID:26872979 RGD:11521858 NCBI chr 1:130,376,720...130,386,411
Ensembl chr 1:130,376,721...130,386,411 		JBrowse link
G EXT1 exostosin glycosyltransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20080592), (PMID:20404326), (PMID:23458899), (PMID:28768899) Ensembl
MGI		 PMID:20080592 PMID:20404326 PMID:23458899 PMID:28768899 GO_REF:0000107 NCBI chr 4:20,645,002...20,935,769
Ensembl chr 4:20,645,610...20,935,540 		JBrowse link
G EXT2 exostosin glycosyltransferase 2 acts_upstream_of_or_within ISO (PMID:16236767) MGI PMID:16236767 NCBI chr 2:18,099,790...18,239,229
Ensembl chr 2:18,209,102...18,232,025 		JBrowse link
G FGF18 fibroblast growth factor 18 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:15781473) Ensembl
MGI		 PMID:15781473 GO_REF:0000107 NCBI chr16:52,724,867...52,760,246
Ensembl chr16:52,725,356...52,759,791 		JBrowse link
G FGF9 fibroblast growth factor 9 acts_upstream_of_or_within ISO (PMID:17544391) MGI PMID:17544391 NCBI chr11:1,554,648...1,581,938
Ensembl chr11:1,554,763...1,582,408 		JBrowse link
G FGFR1 fibroblast growth factor receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17544391) Ensembl
MGI		 PMID:17544391 GO_REF:0000107 NCBI chr15:48,053,895...48,106,634
Ensembl chr15:48,053,340...48,106,724 		JBrowse link
G FOSL2 FOS like 2, AP-1 transcription factor subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15509771) Ensembl
MGI		 PMID:15509771 GO_REF:0000107 NCBI chr 3:110,820,403...110,842,903
Ensembl chr 3:110,823,666...110,843,068 		JBrowse link
G GDF5 growth differentiation factor 5 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:9885252) Ensembl
MGI		 PMID:9885252 GO_REF:0000107 NCBI chr17:38,792,854...38,796,806
Ensembl chr17:38,792,187...38,797,005 		JBrowse link
G GLI2 GLI family zinc finger 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23333501) Ensembl
MGI		 PMID:23333501 GO_REF:0000107 NCBI chr15:30,312,528...30,580,272
Ensembl chr15:30,313,817...30,579,306 		JBrowse link
G GLI3 GLI family zinc finger 3 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:16284117) Ensembl
MGI		 PMID:16284117 GO_REF:0000107 NCBI chr18:52,403,463...52,697,906
Ensembl chr18:52,404,072...52,697,900 		JBrowse link
G GPLD1 glycosylphosphatidylinositol specific phospholipase D1 involved_in ISO (MGI:3583476|PMID:15946906) UniProt PMID:15946906 MGI:3583476 NCBI chr 7:19,289,385...19,355,606
Ensembl chr 7:19,291,174...19,346,619 		JBrowse link
G HES5 hes family bHLH transcription factor 5 NOT|involved_in ISO (MGI:5285816|PMID:17093926) UniProt PMID:17093926 MGI:5285816 NCBI chr 6:64,409,110...64,410,541
Ensembl chr 6:64,408,956...64,410,881 		JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15073147) Ensembl
MGI		 PMID:15073147 GO_REF:0000107 NCBI chr 1:190,625,436...190,673,926
Ensembl chr 1:190,625,244...190,674,845 		JBrowse link
G HMGA2 high mobility group AT-hook 2 involved_in ISO (PMID:21484705) UniProt PMID:21484705 NCBI chr 5:30,188,521...30,329,635 JBrowse link
G HOXA11 homeobox A11 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:14668414) Ensembl
MGI		 PMID:14668414 GO_REF:0000107 NCBI chr18:45,388,523...45,392,190
Ensembl chr18:45,388,375...45,391,953 		JBrowse link
G HOXD11 homeobox D11 acts_upstream_of ISO (PMID:14668414) MGI PMID:14668414 NCBI chr15:81,906,654...81,910,765
Ensembl chr15:81,908,460...81,911,282 		JBrowse link
G HSPG2 heparan sulfate proteoglycan 2 acts_upstream_of_or_within ISO (PMID:10545953) MGI PMID:10545953 NCBI chr 6:79,849,691...79,958,283
Ensembl chr 6:79,849,698...79,958,334 		JBrowse link
G IFT80 intraflagellar transport 80 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23333501) Ensembl
MGI		 PMID:23333501 GO_REF:0000107 NCBI chr13:99,943,203...100,078,148
Ensembl chr13:99,943,208...100,078,148 		JBrowse link
G IHH Indian hedgehog signaling molecule involved_in
acts_upstream_of
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16284117)
(PMID:15951842)		 Ensembl
MGI		 PMID:15951842 PMID:16284117 GO_REF:0000107 NCBI chr15:121,083,750...121,090,548
Ensembl chr15:121,083,753...121,090,121 		JBrowse link
G LOC100359361 high mobility group AT-hook 2-like involved_in ISS UniProt GO_REF:0000024 NCBI chr 1:191,094,785...191,105,394 JBrowse link
G LTBP3 latent transforming growth factor beta binding protein 3 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:11790802) Ensembl
MGI		 PMID:11790802 GO_REF:0000107 NCBI chr 2:6,701,455...6,720,191
Ensembl chr 2:6,701,510...6,720,153 		JBrowse link
G MAPK14 mitogen-activated protein kinase 14 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17644814) Ensembl
MGI		 PMID:17644814 GO_REF:0000107 NCBI chr 7:31,791,398...31,861,544
Ensembl chr 7:31,790,877...31,862,031 		JBrowse link
G MATN1 matrilin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16877353) Ensembl
MGI		 PMID:16877353 GO_REF:0000107 NCBI chr 6:87,342,030...87,351,483
Ensembl chr 6:87,341,472...87,351,501 		JBrowse link
G MEF2C myocyte enhancer factor 2C involved_in
acts_upstream_of_or_within		 ISS
ISO		 (PMID:17336904) UniProt
MGI		 PMID:17336904 GO_REF:0000024 NCBI chr 2:96,122,407...96,296,927
Ensembl chr 2:96,124,168...96,296,810 		JBrowse link
G MEF2D myocyte enhancer factor 2D involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17336904) Ensembl
MGI		 PMID:17336904 GO_REF:0000107 NCBI chr 4:93,581,563...93,616,980
Ensembl chr 4:93,581,598...93,616,983 		JBrowse link
G NFIB nuclear factor I B involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:208,182,397...208,427,504
Ensembl chr 1:208,175,194...208,421,602 		JBrowse link
G NPR2 natriuretic peptide receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:236,508,994...236,529,172
Ensembl chr 1:236,508,998...236,529,128 		JBrowse link
G OSR1 odd-skipped related transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:118,368,471...118,765,107
Ensembl chr 3:118,757,920...118,765,102 		JBrowse link
G OSR2 odd-skipped related transciption factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:37,890,200...37,897,935
Ensembl chr 4:37,890,203...37,897,929 		JBrowse link
G PPP3CC protein phosphatase 3 catalytic subunit gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:6,711,789...6,799,318
Ensembl chr14:6,711,442...6,794,667 		JBrowse link
G PRKCA protein kinase C alpha acts_upstream_of_or_within ISO (PMID:17644814) MGI PMID:17644814 NCBI chr12:12,882,287...13,268,647
Ensembl chr12:12,882,064...13,263,554 		JBrowse link
G PTH1R parathyroid hormone 1 receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16476422)
(PMID:9832460)		 Ensembl
MGI		 PMID:9832460 PMID:16476422 GO_REF:0000107 NCBI chr13:29,749,940...29,775,361
Ensembl chr13:29,753,326...29,775,348 		JBrowse link
G PTHLH parathyroid hormone like hormone acts_upstream_of ISO (PMID:8895385) MGI PMID:8895385 NCBI chr 5:45,750,968...45,763,421
Ensembl chr 5:45,751,292...45,763,415 		JBrowse link
G RB1 RB transcriptional corepressor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:19,186,754...19,317,642
Ensembl chr11:19,186,761...19,317,690 		JBrowse link
G ROR2 receptor tyrosine kinase like orphan receptor 2 acts_upstream_of_or_within ISO (PMID:14745966) MGI PMID:14745966 NCBI chr14:2,803,840...3,035,384
Ensembl chr14:2,804,061...3,035,296 		JBrowse link
G RUNX1 RUNX family transcription factor 1 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr13:198,371,835...198,635,648
Ensembl chr13:198,371,837...198,638,189 		JBrowse link
G RUNX2 RUNX family transcription factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16476422)
(PMID:22916278)
(PMID:10072783)		 Ensembl
MGI
TreeGrafter		 PMID:10072783 PMID:16476422 PMID:22916278 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:40,106,581...40,353,304
Ensembl chr 7:40,106,532...40,460,687 		JBrowse link
G RUNX3 RUNX family transcription factor 3 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:22916278) TreeGrafter
MGI
GO_Central		 PMID:22916278 GO_REF:0000033 GO_REF:0000118 NCBI chr 6:82,531,203...82,595,044
Ensembl chr 6:82,531,559...82,595,026 		JBrowse link
G RUNX3 runt-related transcription factor 3 involved_in IEA TreeGrafter GO_REF:0000118
G SCX scleraxis bHLH transcription factor involved_in ISO (MGI:4418577|PMID:20059955) UniProt PMID:20059955 MGI:4418577 NCBI chr 4:500,884...503,276
Ensembl chr 4:500,526...503,193 		JBrowse link
G SHOX2 SHOX homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22916278) Ensembl
MGI		 PMID:22916278 GO_REF:0000107 NCBI chr13:97,879,586...97,892,276
Ensembl chr13:97,879,281...97,889,785 		JBrowse link
G SIX2 SIX homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20515681) Ensembl
MGI		 PMID:20515681 GO_REF:0000107 NCBI chr 3:95,460,046...95,463,428
Ensembl chr 3:95,459,945...95,463,251 		JBrowse link
G SLC26A2 solute carrier family 26 member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:150,996,868...151,027,483
Ensembl chr 2:150,996,686...151,022,148 		JBrowse link
G SLC39A14 solute carrier family 39 member 14 acts_upstream_of
involved_in		 ISO
IEA		 (MGI:4950776|PMID:21445361) UniProt
Ensembl		 PMID:21445361 GO_REF:0000107 MGI:4950776 NCBI chr14:6,639,485...6,687,929
Ensembl chr14:6,639,206...6,687,924 		JBrowse link
G SNX19 sorting nexin 19 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19877062) Ensembl
MGI		 PMID:19877062 GO_REF:0000107 NCBI chr 9:57,509,186...57,558,361
Ensembl chr 9:57,510,486...57,558,339 		JBrowse link
G SOX5 SRY-box transcription factor 5 involved_in ISO (MGI:2446758|PMID:11702786), (MGI:3037234|PMID:14993235) UniProt PMID:11702786 PMID:14993235 MGI:2446758 MGI:3037234 NCBI chr 5:49,159,950...50,166,463
Ensembl chr 5:49,504,551...50,161,558 		JBrowse link
G SOX6 SRY-box transcription factor 6 involved_in ISO (MGI:2446758|PMID:11702786), (MGI:3037234|PMID:14993235) UniProt PMID:11702786 PMID:14993235 MGI:2446758 MGI:3037234 NCBI chr 2:42,447,391...43,068,824
Ensembl chr 2:42,453,681...43,068,325 		JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA
ISS		 (PMID:12414734)
(PMID:11371614)		 Ensembl
MGI
TreeGrafter
GO_Central
UniProt		 PMID:11371614 PMID:12414734 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr12:8,642,154...8,647,315
Ensembl chr12:8,642,158...8,647,315 		JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr 6:49,332,169...49,348,642
Ensembl chr 6:49,332,173...49,349,046 		JBrowse link
G TGFBI transforming growth factor beta induced ISO RGD PMID:16546826 RGD:1599388 NCBI chr 2:138,191,793...138,225,373
Ensembl chr 2:138,191,807...138,225,366 		JBrowse link
G TRPS1 transcriptional repressor GATA binding 1 acts_upstream_of_or_within ISO (PMID:18363966) MGI PMID:18363966 NCBI chr 4:22,905,627...23,162,862
Ensembl chr 4:22,905,637...23,159,546 		JBrowse link
G TWSG1 twisted gastrulation BMP signaling modulator 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14681194) Ensembl
MGI		 PMID:14681194 GO_REF:0000107 NCBI chr 6:98,629,116...98,678,322
Ensembl chr 6:98,625,505...98,678,258 		JBrowse link
G WNT10B Wnt family member 10B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:14,997,377...15,013,928
Ensembl chr 5:14,997,381...15,003,567 		JBrowse link
G WNT2B Wnt family member 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:107,906,141...107,923,343
Ensembl chr 4:107,903,502...107,921,118 		JBrowse link
G WNT5B Wnt family member 5B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:68,627,158...68,731,938
Ensembl chr 5:68,627,185...68,732,265 		JBrowse link
G WNT7A Wnt family member 7A involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:70,538,802...70,602,464
Ensembl chr13:70,538,894...70,602,454 		JBrowse link
G WNT9A Wnt family member 9A acts_upstream_of ISO (PMID:16818445) MGI PMID:16818445 NCBI chr 2:51,102,757...51,128,346
Ensembl chr 2:51,102,763...51,128,346 		JBrowse link
chondrocyte differentiation involved in endochondral bone morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AXIN2 axin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19623616) Ensembl
MGI		 PMID:19623616 GO_REF:0000107 NCBI chr12:12,311,293...12,343,207
Ensembl chr12:12,311,298...12,343,200 		JBrowse link
G IHH Indian hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25639508) Ensembl
MGI		 PMID:25639508 GO_REF:0000107 NCBI chr15:121,083,750...121,090,548
Ensembl chr15:121,083,753...121,090,121 		JBrowse link
G SCUBE2 signal peptide, CUB domain and EGF like domain containing 2 acts_upstream_of_or_within ISO (PMID:25639508) MGI PMID:25639508 NCBI chr 9:389,806...457,651 JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr12:8,642,154...8,647,315
Ensembl chr12:8,642,158...8,647,315 		JBrowse link
G TRIP11 thyroid hormone receptor interactor 11 acts_upstream_of_or_within ISO (PMID:20089971) MGI PMID:20089971 NCBI chr 7:113,524,406...113,600,411
Ensembl chr 7:113,524,430...113,600,088 		JBrowse link
chondrocyte hypertrophy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EXT1 exostosin glycosyltransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23958822) Ensembl
MGI		 PMID:23958822 GO_REF:0000107 NCBI chr 4:20,645,002...20,935,769
Ensembl chr 4:20,645,610...20,935,540 		JBrowse link
G MEX3C mex-3 RNA binding family member C involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22357625) Ensembl
MGI		 PMID:22357625 GO_REF:0000107 NCBI chr 1:100,678,452...100,699,277
Ensembl chr 1:100,676,660...100,699,403 		JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr12:8,642,154...8,647,315
Ensembl chr12:8,642,158...8,647,315 		JBrowse link
fat pad development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARID5B AT-rich interaction domain 5B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14651970) Ensembl
MGI		 PMID:14651970 GO_REF:0000107 NCBI chr14:65,408,603...65,598,485
Ensembl chr14:65,408,598...65,598,485 		JBrowse link
G ARRDC3 arrestin domain containing 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21982743) Ensembl
MGI		 PMID:21982743 GO_REF:0000107 NCBI chr 2:98,430,451...98,444,835
Ensembl chr 2:98,430,465...98,444,647 		JBrowse link
G BBS4 Bardet-Biedl syndrome 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16794820) Ensembl
MGI		 PMID:16794820 GO_REF:0000107 NCBI chr 7:60,631,913...60,693,359
Ensembl chr 7:60,631,914...60,693,334 		JBrowse link
G CASR calcium sensing receptor ISO RGD PMID:21940515 RGD:7205697 NCBI chr13:138,279,785...138,364,934
Ensembl chr13:138,280,364...138,364,252 		JBrowse link
G DGAT2 diacylglycerol O-acyltransferase 2 involved_in ISO (MGI:3778742|PMID:18252207) BHF-UCL PMID:18252207 MGI:3778742 NCBI chr 9:10,032,163...10,066,082
Ensembl chr 9:10,032,128...10,068,437 		JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (PMID:24770645) MGI PMID:24770645 NCBI chr 1:31,724,290...31,796,594
Ensembl chr 1:31,722,721...31,796,595 		JBrowse link
G ERRFI1 ERBB receptor feedback inhibitor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28053990) Ensembl
MGI		 PMID:28053990 GO_REF:0000107 NCBI chr 6:68,667,651...68,682,629
Ensembl chr 6:68,669,153...68,682,623 		JBrowse link
G FOSL2 FOS like 2, AP-1 transcription factor subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24464219) Ensembl
MGI		 PMID:24464219 GO_REF:0000107 NCBI chr 3:110,820,403...110,842,903
Ensembl chr 3:110,823,666...110,843,068 		JBrowse link
G HMGA2 high mobility group AT-hook 2 acts_upstream_of_or_within ISO (PMID:10742101) MGI PMID:10742101 NCBI chr 5:30,188,521...30,329,635 JBrowse link
G TBL1XR1 TBL1X/Y related 1 acts_upstream_of_or_within ISO (PMID:23499424) MGI PMID:23499424 NCBI chr13:115,312,444...115,488,228
Ensembl chr13:115,312,452...115,487,284 		JBrowse link
G UBB ubiquitin B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18299572) Ensembl
MGI		 PMID:18299572 GO_REF:0000107 NCBI chr12:59,171,258...59,172,841
Ensembl chr12:59,171,289...59,172,841 		JBrowse link
glomerular mesangial cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTA2 actin alpha 2, smooth muscle involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:100,868,145...100,886,732
Ensembl chr14:100,867,733...100,886,713 		JBrowse link
G FOXC2 forkhead box C2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16498405) Ensembl
MGI		 PMID:16498405 GO_REF:0000107 NCBI chr 6:2,552,141...2,555,041
Ensembl chr 6:2,552,862...2,554,367 		JBrowse link
G GPR4 G protein-coupled receptor 4 acts_upstream_of_or_within ISO (PMID:17145776) MGI PMID:17145776 NCBI chr 6:51,968,310...51,979,931
Ensembl chr 6:51,968,814...51,979,461 		JBrowse link
G NOTCH1 notch receptor 1 involved_in IEA Ensembl GO_REF:0000107
glomerular mesangial cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EGR1 early growth response 1 involved_in ISO PMID:18723570 UniProt PMID:18723570 RGD:8553351 NCBI chr 2:140,440,829...140,445,302
Ensembl chr 2:140,441,421...140,445,296 		JBrowse link
growth plate cartilage axis specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G STC1 stanniocalcin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:7,952,175...7,961,365
Ensembl chr14:7,950,434...7,961,566 		JBrowse link
growth plate cartilage chondrocyte development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COL27A1 collagen type XXVII alpha 1 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22206015) Ensembl
MGI		 PMID:22206015 GO_REF:0000107 NCBI chr 1:254,768,576...254,924,893
Ensembl chr 1:254,770,093...254,923,823 		JBrowse link
G POC1A POC1 centriolar protein A acts_upstream_of_or_within ISO (PMID:26496357) MGI PMID:26496357 NCBI chr13:34,227,884...34,308,099
Ensembl chr13:34,227,457...34,308,083 		JBrowse link
growth plate cartilage chondrocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANXA6 annexin A6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr16:71,857,229...71,913,723
Ensembl chr16:71,857,258...71,913,723 		JBrowse link
G ATF2 activating transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:80,984,969...81,076,573
Ensembl chr15:80,985,126...81,081,014 		JBrowse link
G IFT80 intraflagellar transport 80 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26098911) Ensembl
MGI		 PMID:26098911 GO_REF:0000107 NCBI chr13:99,943,203...100,078,148
Ensembl chr13:99,943,208...100,078,148 		JBrowse link
G NPPC natriuretic peptide C involved_in ISS UniProt GO_REF:0000024 NCBI chr15:132,504,669...132,509,688
Ensembl chr15:132,506,474...132,509,673 		JBrowse link
growth plate cartilage chondrocyte growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RARG retinoic acid receptor gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:18,436,267...18,458,625
Ensembl chr 5:18,436,270...18,458,624 		JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr12:8,642,154...8,647,315
Ensembl chr12:8,642,158...8,647,315 		JBrowse link
G TGFBR2 transforming growth factor beta receptor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21420963) Ensembl
MGI		 PMID:21420963 GO_REF:0000107 NCBI chr13:16,784,370...16,875,828
Ensembl chr13:16,784,490...16,878,160 		JBrowse link
growth plate cartilage chondrocyte morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MATN1 matrilin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16877353) Ensembl
MGI		 PMID:16877353 GO_REF:0000107 NCBI chr 6:87,342,030...87,351,483
Ensembl chr 6:87,341,472...87,351,501 		JBrowse link
growth plate cartilage chondrocyte proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF2 activating transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:80,984,969...81,076,573
Ensembl chr15:80,985,126...81,081,014 		JBrowse link
G CER1 cerberus 1, DAN family BMP antagonist involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:207,817,095...207,821,800
Ensembl chr 1:207,818,175...207,822,291 		JBrowse link
G NPPC natriuretic peptide C involved_in ISS UniProt GO_REF:0000024 NCBI chr15:132,504,669...132,509,688
Ensembl chr15:132,506,474...132,509,673 		JBrowse link
growth plate cartilage development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COL2A1 collagen type II alpha 1 chain ISO spheno-occipital synchondrosis RGD PMID:20591638 RGD:8661256 NCBI chr 5:78,350,131...78,380,893
Ensembl chr 5:78,350,137...78,380,718 		JBrowse link
G COL9A1 collagen type IX alpha 1 chain acts_upstream_of_or_within ISO (PMID:18467703)
(PMID:18191556)		 MGI PMID:18191556 PMID:18467703 NCBI chr 1:50,403,355...50,498,356
Ensembl chr 1:50,403,361...50,498,332 		JBrowse link
G COMP cartilage oligomeric matrix protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18467703)
(PMID:18191556)
(PMID:17588960)		 Ensembl
MGI		 PMID:17588960 PMID:18191556 PMID:18467703 GO_REF:0000107 NCBI chr 2:59,061,409...59,068,951
Ensembl chr 2:59,061,426...59,069,564 		JBrowse link
G FOSL2 FOS like 2, AP-1 transcription factor subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15509771) Ensembl
MGI		 PMID:15509771 GO_REF:0000107 NCBI chr 3:110,820,403...110,842,903
Ensembl chr 3:110,823,666...110,843,068 		JBrowse link
G IFT80 intraflagellar transport 80 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26098911) Ensembl
MGI		 PMID:26098911 GO_REF:0000107 NCBI chr13:99,943,203...100,078,148
Ensembl chr13:99,943,208...100,078,148 		JBrowse link
G MMP13 matrix metallopeptidase 13 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21444811) Ensembl
MGI		 PMID:21444811 GO_REF:0000107 NCBI chr 9:33,549,003...33,616,700
Ensembl chr 9:33,549,008...33,561,162 		JBrowse link
G NPR2 natriuretic peptide receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:236,508,994...236,529,172
Ensembl chr 1:236,508,998...236,529,128 		JBrowse link
G RARA retinoic acid receptor alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19389355) Ensembl
MGI		 PMID:19389355 GO_REF:0000107 NCBI chr12:22,047,449...22,085,759
Ensembl chr12:22,047,443...22,085,673 		JBrowse link
G RARB retinoic acid receptor beta involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19389355) Ensembl
MGI		 PMID:19389355 GO_REF:0000107 NCBI chr13:12,336,387...12,507,688
Ensembl chr13:12,336,972...12,507,680 		JBrowse link
G RARG retinoic acid receptor gamma involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19389355) Ensembl
MGI		 PMID:19389355 GO_REF:0000107 NCBI chr 5:18,436,267...18,458,625
Ensembl chr 5:18,436,270...18,458,624 		JBrowse link
G TGFBR2 transforming growth factor beta receptor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21420963) Ensembl
MGI		 PMID:21420963 GO_REF:0000107 NCBI chr13:16,784,370...16,875,828
Ensembl chr13:16,784,490...16,878,160 		JBrowse link
G THBS1 thrombospondin 1 acts_upstream_of_or_within ISO (PMID:18467703) MGI PMID:18467703 NCBI chr 1:131,728,781...131,746,098
Ensembl chr 1:131,728,784...131,746,115 		JBrowse link
G THBS3 thrombospondin 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18467703) Ensembl
MGI		 PMID:18467703 GO_REF:0000107 NCBI chr 4:94,612,702...94,623,905
Ensembl chr 4:94,611,593...94,623,902 		JBrowse link
G ZMPSTE24 zinc metallopeptidase STE24 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11923874) Ensembl
MGI		 PMID:11923874 GO_REF:0000107 NCBI chr 6:96,008,307...96,057,131
Ensembl chr 6:96,008,455...96,062,951 		JBrowse link
lung connective tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOSL2 FOS like 2, AP-1 transcription factor subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:31135379) Ensembl
MGI		 PMID:31135379 GO_REF:0000107 NCBI chr 3:110,820,403...110,842,903
Ensembl chr 3:110,823,666...110,843,068 		JBrowse link
G RXFP1 relaxin family peptide receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15256493) Ensembl
MGI		 PMID:15256493 GO_REF:0000107 NCBI chr 8:47,473,465...47,603,332
Ensembl chr 8:47,473,788...47,601,357 		JBrowse link
mammary gland fat development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CSF1 colony stimulating factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10804170) Ensembl
MGI		 PMID:10804170 GO_REF:0000107 NCBI chr 4:110,178,466...110,198,232
Ensembl chr 4:110,178,475...110,197,900 		JBrowse link
mandibular condyle articular cartilage development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DSPP dentin sialophosphoprotein acts_upstream_of_or_within ISO (PMID:23900597) RGD
MGI		 PMID:20097540 PMID:23900597 RGD:15039407 NCBI chr 8:131,318,187...131,444,274
Ensembl chr 8:131,319,983...131,472,761 		JBrowse link
metanephric capsule development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXD1 forkhead box D1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:82,607,113...82,612,005
Ensembl chr 2:82,607,848...82,609,248 		JBrowse link
metanephric capsule specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXD1 forkhead box D1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:82,607,113...82,612,005
Ensembl chr 2:82,607,848...82,609,248 		JBrowse link
metanephric glomerular mesangial cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDGFB platelet derived growth factor subunit B involved_in ISO (MGI:3039044|PMID:15084468) UniProt PMID:15084468 MGI:3039044 Ensembl chr 5:8,986,462...9,007,435 JBrowse link
metanephric glomerular mesangial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD34 CD34 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:134,912,793...134,937,763
Ensembl chr 9:134,913,121...134,937,762 		JBrowse link
metanephric glomerular mesangial cell proliferation involved in metanephros development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDGFB platelet derived growth factor subunit B involved_in ISO (MGI:1289803|PMID:9693135) UniProt PMID:9693135 MGI:1289803 Ensembl chr 5:8,986,462...9,007,435 JBrowse link
G PDGFRB platelet derived growth factor receptor beta involved_in ISO (MGI:1289803|PMID:9693135) UniProt PMID:9693135 MGI:1289803 NCBI chr 2:151,155,753...151,192,818
Ensembl chr 2:151,155,756...151,192,647 		JBrowse link
metanephric glomerular mesangium development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDGFRB platelet derived growth factor receptor beta involved_in ISO (MGI:1289803|PMID:9693135) UniProt PMID:9693135 MGI:1289803 NCBI chr 2:151,155,753...151,192,818
Ensembl chr 2:151,155,756...151,192,647 		JBrowse link
negative regulation of adipose tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KLF7 KLF transcription factor 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:110,282,399...110,380,165
Ensembl chr15:110,286,463...110,379,305 		JBrowse link
G LMNA lamin A/C ISO RGD PMID:22119912 RGD:10003161 NCBI chr 4:93,899,019...93,927,255
Ensembl chr 4:93,899,019...93,926,320 		JBrowse link
G MIR138 microRNA mir-138 involved_in ISO (PMID:31769250) BHF-UCL PMID:31769250 NCBI chr13:27,450,130...27,450,214
Ensembl chr13:27,450,130...27,450,214 		JBrowse link
G PARP1 poly(ADP-ribose) polymerase 1 involved_in ISO (PMID:32822587) UniProt PMID:32822587 NCBI chr10:14,203,157...14,241,164
Ensembl chr10:14,203,160...14,241,196 		JBrowse link
G POU4F2 POU class 4 homeobox 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:82,044,443...82,046,377
Ensembl chr 8:82,043,643...82,047,675 		JBrowse link
G SIRT1 sirtuin 1 involved_in IMP (PMID:23951196) AgBase PMID:23951196 NCBI chr14:71,091,167...71,126,351
Ensembl chr14:71,091,167...71,123,297 		JBrowse link
G SPI1 Spi-1 proto-oncogene involved_in ISO (MGI:6508506|PMID:25409310) ARUK-UCL PMID:25409310 MGI:6508506 NCBI chr 2:15,227,850...15,245,679
Ensembl chr 2:15,227,881...15,245,677 		JBrowse link
negative regulation of cartilage development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTSK cathepsin K acts_upstream_of_or_within ISO (PMID:19834056) MGI PMID:19834056 NCBI chr 4:98,389,459...98,404,969
Ensembl chr 4:98,391,428...98,404,961 		JBrowse link
G FRZB frizzled related protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18991062) Ensembl
MGI		 PMID:18991062 GO_REF:0000107 NCBI chr15:88,332,856...88,377,275
Ensembl chr15:88,332,860...88,377,247 		JBrowse link
G IDUA alpha-L-iduronidase acts_upstream_of_or_within ISO (PMID:19834056) MGI PMID:19834056 NCBI chr 8:334,604...351,970
Ensembl chr 8:334,617...351,969 		JBrowse link
G LEP leptin ISO RGD PMID:19876764 RGD:5128612 NCBI chr18:20,106,867...20,124,071
Ensembl chr18:20,106,868...20,123,323 		JBrowse link
G MIR21 microRNA mir-21 involved_in ISO (PMID:24577233) BHF-UCL PMID:24577233 NCBI chr12:36,065,267...36,065,358
Ensembl chr12:36,065,267...36,065,358 		JBrowse link
G NOG noggin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10684250) Ensembl
MGI		 PMID:10684250 GO_REF:0000107 NCBI chr12:32,891,321...32,892,206
Ensembl chr12:32,891,321...32,892,206 		JBrowse link
G RARA retinoic acid receptor alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10684250) Ensembl
MGI		 PMID:10684250 GO_REF:0000107 NCBI chr12:22,047,449...22,085,759
Ensembl chr12:22,047,443...22,085,673 		JBrowse link
G RARB retinoic acid receptor beta involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10684250) Ensembl
MGI		 PMID:10684250 GO_REF:0000107 NCBI chr13:12,336,387...12,507,688
Ensembl chr13:12,336,972...12,507,680 		JBrowse link
G RARG retinoic acid receptor gamma involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10684250) Ensembl
MGI		 PMID:10684250 GO_REF:0000107 NCBI chr 5:18,436,267...18,458,625
Ensembl chr 5:18,436,270...18,458,624 		JBrowse link
G TGFB2 transforming growth factor beta 2 acts_upstream_of_or_within ISO (PMID:21780244) MGI PMID:21780244 NCBI chr10:8,306,136...8,435,307
Ensembl chr10:8,305,539...8,390,341 		JBrowse link
G WNT9A Wnt family member 9A acts_upstream_of_or_within ISO (PMID:19047045) MGI PMID:19047045 NCBI chr 2:51,102,757...51,128,346
Ensembl chr 2:51,102,763...51,128,346 		JBrowse link
negative regulation of chondrocyte development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PTHLH parathyroid hormone like hormone acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:90087) MGI
Ensembl		 PMID:90087 GO_REF:0000107 NCBI chr 5:45,750,968...45,763,421
Ensembl chr 5:45,751,292...45,763,415 		JBrowse link
G RFLNA refilin A involved_in IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr14:28,823,571...28,841,281
Ensembl chr14:28,823,575...28,845,719 		JBrowse link
G RFLNB refilin B involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:24436304) Ensembl
MGI
TreeGrafter
GO_Central		 PMID:24436304 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr12:47,307,657...47,316,652
Ensembl chr12:47,307,637...47,314,589 		JBrowse link
negative regulation of chondrocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAMTS12 ADAM metallopeptidase with thrombospondin type 1 motif 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:19,547,003...19,920,780
Ensembl chr16:19,547,011...19,920,513 		JBrowse link
G ADAMTS7 ADAM metallopeptidase with thrombospondin type 1 motif 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:47,919,398...47,994,528
Ensembl chr 7:47,929,033...47,994,453 		JBrowse link
G BMP4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17481601) Ensembl
MGI		 PMID:17481601 GO_REF:0000107 NCBI chr 1:183,415,989...183,422,888
Ensembl chr 1:183,416,146...183,422,637 		JBrowse link
G CCN4 cellular communication network factor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:8,078,163...8,110,906
Ensembl chr 4:8,079,755...8,110,700 		JBrowse link
G CHADL chondroadherin like involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:7,246,892...7,258,962
Ensembl chr 5:7,248,444...7,253,170 		JBrowse link
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16818445)
(PMID:15866163)		 Ensembl
MGI		 PMID:15866163 PMID:16818445 GO_REF:0000107 NCBI chr13:25,163,550...25,208,314
Ensembl chr13:25,164,277...25,208,311 		JBrowse link
G EFEMP1 EGF containing fibulin extracellular matrix protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:85,407,677...85,473,251
Ensembl chr 3:85,407,677...85,473,252 		JBrowse link
G GDF5 growth differentiation factor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:38,792,854...38,796,806
Ensembl chr17:38,792,187...38,797,005 		JBrowse link
G GLI2 GLI family zinc finger 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17328886) Ensembl
MGI		 PMID:17328886 GO_REF:0000107 NCBI chr15:30,312,528...30,580,272
Ensembl chr15:30,313,817...30,579,306 		JBrowse link
G GLI3 GLI family zinc finger 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16284117) Ensembl
MGI		 PMID:16284117 GO_REF:0000107 NCBI chr18:52,403,463...52,697,906
Ensembl chr18:52,404,072...52,697,900 		JBrowse link
G GREM1 gremlin 1, DAN family BMP antagonist involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:136,617,041...136,629,293
Ensembl chr 1:136,617,105...136,629,292 		JBrowse link
G IHH Indian hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16284117) Ensembl
MGI		 PMID:16284117 GO_REF:0000107 NCBI chr15:121,083,750...121,090,548
Ensembl chr15:121,083,753...121,090,121 		JBrowse link
G LTBP3 latent transforming growth factor beta binding protein 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11790802) Ensembl
MGI		 PMID:11790802 GO_REF:0000107 NCBI chr 2:6,701,455...6,720,191
Ensembl chr 2:6,701,510...6,720,153 		JBrowse link
G MKX mohawk homeobox ISO RGD PMID:27370800 RGD:40924660 NCBI chr10:39,096,778...39,173,384
Ensembl chr10:39,096,782...39,172,198 		JBrowse link
G NKX3-2 NK3 homeobox 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:9,179,061...9,183,340
Ensembl chr 8:9,179,232...9,182,892 		JBrowse link
G PTH parathyroid hormone involved_in ISO PMID:11604398 CAFA PMID:11604398 RGD:12793028 NCBI chr 2:45,757,398...45,760,433
Ensembl chr 2:45,757,398...45,760,415 		JBrowse link
G PTHLH parathyroid hormone like hormone acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:90087)
(PMID:17328886)
(PMID:8895385)		 MGI
Ensembl		 PMID:90087 PMID:8895385 PMID:17328886 GO_REF:0000107 NCBI chr 5:45,750,968...45,763,421
Ensembl chr 5:45,751,292...45,763,415 		JBrowse link
G PTPN11 protein tyrosine phosphatase non-receptor type 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:39,202,165...39,292,041
Ensembl chr14:39,202,169...39,292,003 		JBrowse link
G RARB retinoic acid receptor beta involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10684250) Ensembl
MGI		 PMID:10684250 GO_REF:0000107 NCBI chr13:12,336,387...12,507,688
Ensembl chr13:12,336,972...12,507,680 		JBrowse link
G RARG retinoic acid receptor gamma involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10684250) Ensembl
MGI		 PMID:10684250 GO_REF:0000107 NCBI chr 5:18,436,267...18,458,625
Ensembl chr 5:18,436,270...18,458,624 		JBrowse link
G SNAI2 snail family transcriptional repressor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:79,264,880...79,268,475
Ensembl chr 4:79,264,880...79,268,475 		JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within		 ISS
ISO
IEA		 (PMID:11371614) UniProt
MGI
Ensembl		 PMID:11371614 GO_REF:0000024 GO_REF:0000107 NCBI chr12:8,642,154...8,647,315
Ensembl chr12:8,642,158...8,647,315 		JBrowse link
G TGFBR1 transforming growth factor beta receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:240,842,735...240,918,267
Ensembl chr 1:240,860,156...240,918,528 		JBrowse link
G WNT9A Wnt family member 9A acts_upstream_of_or_within ISO (PMID:16818445) MGI PMID:16818445 NCBI chr 2:51,102,757...51,128,346
Ensembl chr 2:51,102,763...51,128,346 		JBrowse link
negative regulation of glomerular mesangial cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:183,415,989...183,422,888
Ensembl chr 1:183,416,146...183,422,637 		JBrowse link
G BMP7 bone morphogenetic protein 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:57,567,770...57,676,516
Ensembl chr17:57,584,956...57,675,986 		JBrowse link
G IFNG interferon gamma ISO RGD PMID:1906384 RGD:10755757 NCBI chr 5:32,477,906...32,482,670
Ensembl chr 5:32,477,906...32,482,670 		JBrowse link
G MIR125A microRNA mir-125a involved_in ISO (PMID:26563755) ARUK-UCL PMID:26563755 NCBI chr 6:58,331,566...58,331,645
Ensembl chr 6:58,331,566...58,331,645 		JBrowse link
negative regulation of growth plate cartilage chondrocyte proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DSPP dentin sialophosphoprotein acts_upstream_of_or_within ISO (PMID:26972716) MGI PMID:26972716 NCBI chr 8:131,318,187...131,444,274
Ensembl chr 8:131,319,983...131,472,761 		JBrowse link
negative regulation of metanephric glomerular mesangial cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WT1 WT1 transcription factor involved_in ISS UniProt GO_REF:0000024 NCBI chr 2:28,411,467...28,456,007
Ensembl chr 2:28,411,803...28,455,997 		JBrowse link
positive regulation of adipose tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKT2 AKT serine/threonine kinase 2 involved_in IMP (PMID:23951196) AgBase PMID:23951196 NCBI chr 6:48,555,785...48,620,472
Ensembl chr 6:48,555,795...48,587,919 		JBrowse link
G GHRL ghrelin and obestatin prepropeptide ISO RGD PMID:14551228 RGD:12904887 NCBI chr13:66,442,106...66,453,576
Ensembl chr13:66,445,992...66,452,917 		JBrowse link
G LPL lipoprotein lipase involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:4,104,761...4,134,964
Ensembl chr14:4,104,772...4,135,814 		JBrowse link
G MIR103-1 microRNA mir-103-1 acts_upstream_of_or_within ISO (PMID:19188425) MGI PMID:19188425 NCBI chr16:55,329,442...55,329,523
Ensembl chr16:55,329,442...55,329,523 		JBrowse link
G MIR103-2 microRNA mir-103-2 acts_upstream_of_or_within ISO (PMID:19188425) MGI PMID:19188425 NCBI chr17:31,808,837...31,808,916
Ensembl chr17:31,808,836...31,808,920 		JBrowse link
G MIR143 microRNA mir-143 acts_upstream_of_or_within ISO (PMID:19188425) MGI PMID:19188425 NCBI chr 2:150,578,738...150,578,817
Ensembl chr 2:150,578,738...150,578,817 		JBrowse link
G NR1H4 nuclear receptor subfamily 1 group H member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:83,607,222...83,732,668
Ensembl chr 5:83,604,294...83,684,604 		JBrowse link
G PPARG peroxisome proliferator activated receptor gamma acts_upstream_of ISO (MGI:6508506|PMID:25409310) ARUK-UCL PMID:25409310 MGI:6508506 NCBI chr13:68,301,566...68,433,951
Ensembl chr13:68,302,322...68,433,944 		JBrowse link
G PRKAA1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:25,745,902...25,783,524
Ensembl chr16:25,745,324...25,783,707 		JBrowse link
G SH3PXD2B SH3 and PX domains 2B involved_in ISO (MGI:5800302|PMID:27711054) UniProt PMID:27711054 MGI:5800302 NCBI chr16:51,733,170...51,858,774
Ensembl chr16:51,733,135...51,858,772 		JBrowse link
G SIRT1 sirtuin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:71,091,167...71,126,351
Ensembl chr14:71,091,167...71,123,297 		JBrowse link
G SORL1 sortilin related receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:48,435,350...48,653,670
Ensembl chr 9:48,435,345...48,653,655 		JBrowse link
G TRPM4 transient receptor potential cation channel subfamily M member 4 ISO RGD PMID:23081848 RGD:10003033 NCBI chr 6:54,342,774...54,377,557
Ensembl chr 6:54,342,784...54,377,155 		JBrowse link
positive regulation of cartilage development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP1 bone morphogenetic protein 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:3201241) MGI
Ensembl		 PMID:3201241 GO_REF:0000107 NCBI chr14:6,443,773...6,489,066
Ensembl chr14:6,443,912...6,489,063 		JBrowse link
G BMP10 bone morphogenetic protein 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:73,519,904...73,530,448
Ensembl chr 3:73,519,934...73,529,950 		JBrowse link
G BMP2 bone morphogenetic protein 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:3201241)
(PMID:10684250)		 MGI
Ensembl		 PMID:3201241 PMID:10684250 GO_REF:0000107 NCBI chr17:15,750,487...15,762,982
Ensembl chr17:15,749,835...15,761,195 		JBrowse link
G BMP4 bone morphogenetic protein 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:3201241) MGI
Ensembl		 PMID:3201241 GO_REF:0000107 NCBI chr 1:183,415,989...183,422,888
Ensembl chr 1:183,416,146...183,422,637 		JBrowse link
G BMPR1B bone morphogenetic protein receptor type 1B involved_in ISS AgBase GO_REF:0000024 NCBI chr 8:124,536,648...125,035,841
Ensembl chr 8:124,536,653...124,759,406 		JBrowse link
G BMPR2 bone morphogenetic protein receptor type 2 involved_in ISS AgBase GO_REF:0000024 NCBI chr15:105,971,577...106,132,496
Ensembl chr15:105,970,428...106,135,730 		JBrowse link
G CCN1 cellular communication network factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9441684) Ensembl
MGI		 PMID:9441684 GO_REF:0000107 NCBI chr 4:130,392,404...130,395,179
Ensembl chr 4:130,392,407...130,395,150 		JBrowse link
G GDF2 growth differentiation factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:88,506,083...88,513,416
Ensembl chr14:88,507,399...88,513,375 		JBrowse link
G MDK midkine involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:16,130,787...16,133,791
Ensembl chr 2:16,130,788...16,133,510 		JBrowse link
G SCX scleraxis bHLH transcription factor involved_in ISO (MGI:1343990|PMID:10477299) UniProt PMID:10477299 MGI:1343990 NCBI chr 4:500,884...503,276
Ensembl chr 4:500,526...503,193 		JBrowse link
G SMAD1 SMAD family member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19251704) Ensembl
MGI		 PMID:19251704 GO_REF:0000107 NCBI chr 8:82,907,557...82,987,909
Ensembl chr 8:82,908,527...82,968,994 		JBrowse link
G SOX5 SRY-box transcription factor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:49,159,950...50,166,463
Ensembl chr 5:49,504,551...50,161,558 		JBrowse link
G SOX6 SRY-box transcription factor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:42,447,391...43,068,824
Ensembl chr 2:42,453,681...43,068,325 		JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within		 ISS
ISO
IEA		 (PMID:19047045) UniProt
MGI
Ensembl		 PMID:19047045 GO_REF:0000024 GO_REF:0000107 NCBI chr12:8,642,154...8,647,315
Ensembl chr12:8,642,158...8,647,315 		JBrowse link
G WNT5A Wnt family member 5A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18991062) Ensembl
MGI		 PMID:18991062 GO_REF:0000107 NCBI chr13:37,344,684...37,367,215
Ensembl chr13:37,344,699...37,367,207 		JBrowse link
G ZBTB16 zinc finger and BTB domain containing 16 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:41,639,536...41,839,254
Ensembl chr 9:41,639,701...41,836,742 		JBrowse link
positive regulation of chondrocyte development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HOXA11 homeobox A11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14668414) Ensembl
MGI		 PMID:14668414 GO_REF:0000107 NCBI chr18:45,388,523...45,392,190
Ensembl chr18:45,388,375...45,391,953 		JBrowse link
G HOXD11 homeobox D11 acts_upstream_of_or_within ISO (PMID:14668414) MGI PMID:14668414 NCBI chr15:81,906,654...81,910,765
Ensembl chr15:81,908,460...81,911,282 		JBrowse link
positive regulation of chondrocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP6 bone morphogenetic protein 6 ISO RGD PMID:23077084 RGD:7242190 NCBI chr 7:5,058,817...5,208,868
Ensembl chr 7:5,058,817...5,210,270 		JBrowse link
G FGF18 fibroblast growth factor 18 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15781473) Ensembl
MGI		 PMID:15781473 GO_REF:0000107 NCBI chr16:52,724,867...52,760,246
Ensembl chr16:52,725,356...52,759,791 		JBrowse link
G GDF5 growth differentiation factor 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9885252)
(PMID:18363966)		 Ensembl
MGI		 PMID:9885252 PMID:18363966 GO_REF:0000107 NCBI chr17:38,792,854...38,796,806
Ensembl chr17:38,792,187...38,797,005 		JBrowse link
G GDF6 growth differentiation factor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:40,473,015...40,491,142
Ensembl chr 4:40,472,935...40,490,033 		JBrowse link
G GLI3 GLI family zinc finger 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17328886) Ensembl
MGI		 PMID:17328886 GO_REF:0000107 NCBI chr18:52,403,463...52,697,906
Ensembl chr18:52,404,072...52,697,900 		JBrowse link
G HOXA11 homeobox A11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14668414) Ensembl
MGI		 PMID:14668414 GO_REF:0000107 NCBI chr18:45,388,523...45,392,190
Ensembl chr18:45,388,375...45,391,953 		JBrowse link
G HOXD11 homeobox D11 acts_upstream_of_or_within ISO (PMID:14668414) MGI PMID:14668414 NCBI chr15:81,906,654...81,910,765
Ensembl chr15:81,908,460...81,911,282 		JBrowse link
G LOXL2 lysyl oxidase like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:7,435,861...7,540,699
Ensembl chr14:7,435,867...7,540,704 		JBrowse link
G PKDCC protein kinase domain containing, cytoplasmic involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:98,258,456...98,268,539
Ensembl chr 3:98,258,463...98,268,553 		JBrowse link
G POR cytochrome p450 oxidoreductase ISO RGD PMID:19264869 RGD:2316785 NCBI chr 3:10,212,734...10,272,184
Ensembl chr 3:10,212,735...10,281,823 		JBrowse link
G PRKG2 protein kinase cGMP-dependent 2 ISO RGD PMID:15466490 RGD:150429792 NCBI chr 8:136,754,698...136,854,589
Ensembl chr 8:136,755,469...136,852,906 		JBrowse link
G RELA RELA proto-oncogene, NF-kB subunit ISO RGD PMID:17884819 RGD:2298851 NCBI chr 2:6,594,869...6,602,684
Ensembl chr 2:6,593,969...6,603,469 		JBrowse link
G RUNX2 RUNX family transcription factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10072783) Ensembl
MGI		 PMID:10072783 GO_REF:0000107 NCBI chr 7:40,106,581...40,353,304
Ensembl chr 7:40,106,532...40,460,687 		JBrowse link
G SMAD3 SMAD family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:164,998,457...165,124,455
Ensembl chr 1:164,998,103...165,124,449 		JBrowse link
G SOX5 SRY-box transcription factor 5 involved_in IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:49,159,950...50,166,463
Ensembl chr 5:49,504,551...50,161,558 		JBrowse link
G SOX6 SRY-box transcription factor 6 involved_in IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:42,447,391...43,068,824
Ensembl chr 2:42,453,681...43,068,325 		JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in ISS
IBA
IEA		 UniProt
GO_Central
TreeGrafter
Ensembl		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr12:8,642,154...8,647,315
Ensembl chr12:8,642,158...8,647,315 		JBrowse link
G THRB thyroid hormone receptor beta ISO RGD PMID:15647824 RGD:1601663 NCBI chr13:10,900,716...11,360,587
Ensembl chr13:10,900,724...11,359,544 		JBrowse link
G ZBTB16 zinc finger and BTB domain containing 16 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:41,639,536...41,839,254
Ensembl chr 9:41,639,701...41,836,742 		JBrowse link
G ZNF219 zinc finger protein 219 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:78,028,560...78,043,491
Ensembl chr 7:78,035,228...78,043,464 		JBrowse link
positive regulation of chondrocyte hypertrophy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SMAD7 SMAD family member 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:98,512,800...98,543,924
Ensembl chr 1:98,514,267...98,542,382 		JBrowse link
positive regulation of glomerular mesangial cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C3AR1 complement C3a receptor 1 ISO RGD PMID:23713944 RGD:7411623 NCBI chr 5:63,088,778...63,098,750 JBrowse link
G CFLAR CASP8 and FADD like apoptosis regulator ISO RGD PMID:24691542 RGD:11341715 NCBI chr15:104,780,744...104,835,631
Ensembl chr15:104,781,616...104,835,630 		JBrowse link
G IL6R interleukin 6 receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:95,322,426...95,381,393
Ensembl chr 4:95,322,433...95,381,282 		JBrowse link
G ITGB3 integrin subunit beta 3 ISO RGD PMID:20135641 RGD:4892623 NCBI chr12:16,694,466...16,752,228
Ensembl chr12:16,693,514...16,752,292 		JBrowse link
G PDGFB platelet derived growth factor subunit B involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 5:8,986,462...9,007,435 JBrowse link
G PDGFD platelet derived growth factor D ISO RGD PMID:12937299 RGD:9854637 NCBI chr 9:34,388,636...34,621,227
Ensembl chr 9:34,388,643...34,621,244 		JBrowse link
G SERPINB7 serpin family B member 7 ISO RGD PMID:21945418 RGD:7207383 NCBI chr 1:157,953,872...157,999,242
Ensembl chr 1:157,953,877...157,998,842 		JBrowse link
positive regulation of glomerular metanephric mesangial cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EGR1 early growth response 1 involved_in ISO PMID:8910451 UniProt PMID:8910451 RGD:8553929 NCBI chr 2:140,440,829...140,445,302
Ensembl chr 2:140,441,421...140,445,296 		JBrowse link
positive regulation of tendon cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GDF7 growth differentiation factor 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:117,586,188...117,592,541
Ensembl chr 3:117,587,430...117,592,466 		JBrowse link
prostate gland stromal morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXA1 forkhead box A1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15987773) Ensembl
MGI		 PMID:15987773 GO_REF:0000107 NCBI chr 7:62,471,233...62,479,638
Ensembl chr 7:62,471,249...62,479,220 		JBrowse link
G ID4 inhibitor of DNA binding 4 acts_upstream_of_or_within ISO (PMID:23786676) MGI PMID:23786676 NCBI chr 7:15,281,535...15,284,895
Ensembl chr 7:15,281,757...15,282,839 		JBrowse link
G IGF1 insulin like growth factor 1 acts_upstream_of_or_within ISO (PMID:17138659) MGI PMID:17138659 NCBI chr 5:81,762,027...81,909,253
Ensembl chr 5:81,775,970...81,848,033 		JBrowse link
G LOC110258364 cysteine-rich protein 1 involved_in ISO (PMID:9507743) UniProt PMID:9507743
regulation of adipose tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PLAAT3 phospholipase A and acyltransferase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:8,410,540...8,444,604
Ensembl chr 2:8,413,388...8,444,595 		JBrowse link
regulation of cartilage development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20501701) Ensembl
MGI		 PMID:20501701 GO_REF:0000107 NCBI chr 1:183,415,989...183,422,888
Ensembl chr 1:183,416,146...183,422,637 		JBrowse link
G KAT2A lysine acetyltransferase 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:20,638,493...20,647,464
Ensembl chr12:20,638,497...20,647,461 		JBrowse link
G SCX scleraxis bHLH transcription factor involved_in ISO (MGI:4413438|PMID:18802027) UniProt PMID:18802027 MGI:4413438 NCBI chr 4:500,884...503,276
Ensembl chr 4:500,526...503,193 		JBrowse link
G SMPD3 sphingomyelin phosphodiesterase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24505141) Ensembl
MGI		 PMID:24505141 GO_REF:0000107 NCBI chr 6:28,938,287...29,025,397
Ensembl chr 6:28,938,290...29,025,357 		JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in ISS UniProt GO_REF:0000024 NCBI chr12:8,642,154...8,647,315
Ensembl chr12:8,642,158...8,647,315 		JBrowse link
G TGFB1 transforming growth factor beta 1 acts_upstream_of_or_within ISO (PMID:20501701) MGI PMID:20501701 NCBI chr 6:49,332,169...49,348,642
Ensembl chr 6:49,332,173...49,349,046 		JBrowse link
regulation of chondrocyte development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AXIN2 axin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19623616) Ensembl
MGI		 PMID:19623616 GO_REF:0000107 NCBI chr12:12,311,293...12,343,207
Ensembl chr12:12,311,298...12,343,200 		JBrowse link
G RFLNA refilin A involved_in IEA InterPro GO_REF:0000002 NCBI chr14:28,823,571...28,841,281
Ensembl chr14:28,823,575...28,845,719 		JBrowse link
G RFLNB refilin B involved_in IEA InterPro GO_REF:0000002 NCBI chr12:47,307,657...47,316,652
Ensembl chr12:47,307,637...47,314,589 		JBrowse link
regulation of chondrocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCN2 cellular communication network factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18597638) Ensembl
MGI		 PMID:18597638 GO_REF:0000107 NCBI chr 1:31,674,398...31,677,697
Ensembl chr 1:31,674,394...31,677,691 		JBrowse link
G GLG1 golgi glycoprotein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20530870) Ensembl
MGI		 PMID:20530870 GO_REF:0000107 NCBI chr 6:13,011,829...13,165,487
Ensembl chr 6:13,011,837...13,164,367 		JBrowse link
G HOXA11 homeobox A11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22916278) Ensembl
MGI		 PMID:22916278 GO_REF:0000107 NCBI chr18:45,388,523...45,392,190
Ensembl chr18:45,388,375...45,391,953 		JBrowse link
G HOXD11 homeobox D11 acts_upstream_of_or_within ISO (PMID:22916278) MGI PMID:22916278 NCBI chr15:81,906,654...81,910,765
Ensembl chr15:81,908,460...81,911,282 		JBrowse link
G LNPK lunapark, ER junction formation factor acts_upstream_of_or_within ISO (PMID:22916278) MGI PMID:22916278 NCBI chr15:81,721,637...81,805,706
Ensembl chr15:81,721,644...81,805,680 		JBrowse link
G MAF MAF bZIP transcription factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14512017) Ensembl
MGI		 PMID:14512017 GO_REF:0000107 NCBI chr 6:8,468,736...8,910,012
Ensembl chr 6:8,468,413...8,485,030 		JBrowse link
G MBOAT2 membrane bound O-acyltransferase domain containing 2 involved_in ISO (MGI:6467698|PMID:29196633) UniProt PMID:29196633 MGI:6467698 NCBI chr 3:127,243,797...127,365,443
Ensembl chr 3:127,243,275...127,360,057 		JBrowse link
G MDK midkine involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:16,130,787...16,133,791
Ensembl chr 2:16,130,788...16,133,510 		JBrowse link
G PTHLH parathyroid hormone like hormone involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:45,750,968...45,763,421
Ensembl chr 5:45,751,292...45,763,415 		JBrowse link
G SCIN scinderin involved_in ISS UniProt GO_REF:0000024 NCBI chr 9:82,103,271...82,185,254
Ensembl chr 9:82,103,087...82,185,283 		JBrowse link
G SHOX2 SHOX homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16537395) Ensembl
MGI		 PMID:16537395 GO_REF:0000107 NCBI chr13:97,879,586...97,892,276
Ensembl chr13:97,879,281...97,889,785 		JBrowse link
G SIX2 SIX homeobox 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:95,460,046...95,463,428
Ensembl chr 3:95,459,945...95,463,251 		JBrowse link
G TRPS1 transcriptional repressor GATA binding 1 involved_in ISO (MGI:3848565|PMID:19389374) UniProt PMID:19389374 MGI:3848565 NCBI chr 4:22,905,627...23,162,862
Ensembl chr 4:22,905,637...23,159,546 		JBrowse link
regulation of glomerular mesangial cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDGFA platelet derived growth factor subunit A NOT|involved_in ISO (PMID:11788434) UniProt PMID:11788434 NCBI chr 3:296,399...322,967
Ensembl chr 3:301,584...321,712 		JBrowse link
regulation of growth plate cartilage chondrocyte proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CARM1 coactivator associated arginine methyltransferase 1 acts_upstream_of_or_within ISO (PMID:19725955) MGI PMID:19725955 NCBI chr 2:69,602,121...69,644,862
Ensembl chr 2:69,602,136...69,644,854 		JBrowse link
G POR cytochrome p450 oxidoreductase ISO positive regulation RGD PMID:19264869 RGD:2316785 NCBI chr 3:10,212,734...10,272,184
Ensembl chr 3:10,212,735...10,281,823 		JBrowse link
tendon cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:183,415,989...183,422,888
Ensembl chr 1:183,416,146...183,422,637 		JBrowse link
G MKX mohawk homeobox acts_upstream_of_or_within ISO (PMID:20696843) RGD
MGI		 PMID:20696843 PMID:27370800 RGD:40924660 NCBI chr10:39,096,778...39,173,384
Ensembl chr10:39,096,782...39,172,198 		JBrowse link
G SCX scleraxis bHLH transcription factor involved_in ISO (MGI:3715390|PMID:17567668), (MGI:4418577|PMID:20059955) UniProt PMID:17567668 PMID:20059955 MGI:3715390 MGI:4418577 NCBI chr 4:500,884...503,276
Ensembl chr 4:500,526...503,193 		JBrowse link
G TNMD tenomodulin involved_in ISO PMID:21412429 UniProt PMID:21412429 RGD:8553701 NCBI chr  X:82,269,323...82,292,083
Ensembl chr  X:82,269,239...82,292,246 		JBrowse link
tendon development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COL11A1 collagen type XI alpha 1 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21467034) Ensembl
MGI		 PMID:21467034 GO_REF:0000107 NCBI chr 4:115,638,381...115,841,679
Ensembl chr 4:115,634,172...115,840,708 		JBrowse link
G COL5A1 collagen type V alpha 1 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21467034) Ensembl
MGI		 PMID:21467034 GO_REF:0000107 NCBI chr 1:273,934,219...274,083,264
Ensembl chr 1:273,971,971...274,085,111 		JBrowse link
G COMP cartilage oligomeric matrix protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24312420)
(PMID:19808781)		 Ensembl
MGI		 PMID:19808781 PMID:24312420 GO_REF:0000107 NCBI chr 2:59,061,409...59,068,951
Ensembl chr 2:59,061,426...59,069,564 		JBrowse link
G SCX scleraxis bHLH transcription factor involved_in ISO (MGI:3715390|PMID:17567668) UniProt PMID:17567668 MGI:3715390 NCBI chr 4:500,884...503,276
Ensembl chr 4:500,526...503,193 		JBrowse link
tendon formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MKX mohawk homeobox acts_upstream_of_or_within ISO (PMID:20696843)
(PMID:21254332)
(PMID:20498044)		 MGI PMID:20498044 PMID:20696843 PMID:21254332 NCBI chr10:39,096,778...39,173,384
Ensembl chr10:39,096,782...39,172,198 		JBrowse link
G SCX scleraxis bHLH transcription factor involved_in ISO (MGI:2679803|PMID:14568104), (MGI:3715390|PMID:17567668) UniProt PMID:14568104 PMID:17567668 MGI:2679803 MGI:3715390 NCBI chr 4:500,884...503,276
Ensembl chr 4:500,526...503,193 		JBrowse link
tendon sheath development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MKX mohawk homeobox acts_upstream_of_or_within ISO (PMID:20696843) MGI PMID:20696843 NCBI chr10:39,096,778...39,173,384
Ensembl chr10:39,096,782...39,172,198 		JBrowse link
trachea cartilage development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RARA retinoic acid receptor alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9376317) Ensembl
MGI		 PMID:9376317 GO_REF:0000107 NCBI chr12:22,047,449...22,085,759
Ensembl chr12:22,047,443...22,085,673 		JBrowse link
G RARG retinoic acid receptor gamma involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8388780) Ensembl
MGI		 PMID:8388780 GO_REF:0000107 NCBI chr 5:18,436,267...18,458,625
Ensembl chr 5:18,436,270...18,458,624 		JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24218621) Ensembl
MGI		 PMID:24218621 GO_REF:0000107 NCBI chr12:8,642,154...8,647,315
Ensembl chr12:8,642,158...8,647,315 		JBrowse link
G SRF serum response factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24218621) Ensembl
MGI		 PMID:24218621 GO_REF:0000107 NCBI chr 7:38,213,300...38,223,686
Ensembl chr 7:38,213,487...38,222,144 		JBrowse link
trachea cartilage morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HOXA5 homeobox A5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9441679) Ensembl
MGI		 PMID:9441679 GO_REF:0000107 NCBI chr18:45,429,691...45,432,723
Ensembl chr18:45,421,663...45,432,885 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:18256198) MGI PMID:18256198 NCBI chr 5:60,149,041...60,318,719
Ensembl chr 5:60,149,028...60,314,662 		JBrowse link
G RSPO2 R-spondin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18256198) Ensembl
MGI		 PMID:18256198 GO_REF:0000107 NCBI chr 4:29,415,774...29,577,890
Ensembl chr 4:29,414,752...29,579,674 		JBrowse link
G WNT7B Wnt family member 7B acts_upstream_of_or_within ISO (PMID:18367557) MGI PMID:18367557 NCBI chr 5:3,521,412...3,572,322
Ensembl chr 5:3,521,288...3,572,314 		JBrowse link
Term paths to the root
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Term Annotations click to browse term
  biological_process 17799
    developmental process 6719
      anatomical structure development 6314
        tissue development 2232
          connective tissue development 339
            adipose tissue development + 76
            cardiac skeleton development + 0
            cartilage development + 236
            glomerular mesangium development + 20
            growth plate cartilage development + 26
            kidney stroma development 0
            lung connective tissue development 2
            prostate gland stromal morphogenesis 4
            renal capsule development + 1
            tendon development + 8
            tendon sheath development 1
paths to the root