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ONTOLOGY REPORT - ANNOTATIONS

Term:kidney vasculature development
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Accession:GO:0061440 term browser browse the term
Definition:The process whose specific outcome is the progression of the vasculature of the kidney over time, from its formation to the mature structure.


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glomerular capillary formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in IEA
ISO
ISS 		GO_REF:0000107
(PMID:18272846)
GO_REF:0000024 		Ensembl
RGD
UniProt		 PMID:18272846 GO_REF:0000024 GO_REF:0000107 NCBI chr15:22,098,191...22,113,145
Ensembl chr15:22,098,470...22,105,172 		JBrowse link
G Notch2 notch receptor 2 involved_in IEA
ISO 		GO_REF:0000107
(PMID:15821257) 		Ensembl
RGD		 PMID:15821257 GO_REF:0000107 NCBI chr 2:188,299,336...188,432,823
Ensembl chr 2:188,299,336...188,432,823 		JBrowse link
G Notch3 notch receptor 3 involved_in IEA
ISO 		GO_REF:0000107
(PMID:15821257) 		Ensembl
RGD		 PMID:15821257 GO_REF:0000107 NCBI chr 7:11,783,550...11,834,585
Ensembl chr 7:11,784,272...11,834,778 		JBrowse link
glomerular endothelium development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd34 CD34 molecule involved_in ISO (PMID:17464107) RGD PMID:17464107 NCBI chr13:109,008,786...109,029,317
Ensembl chr13:109,008,623...109,029,315 		JBrowse link
G Edn1 endothelin 1 involved_in IEA
ISO 		GO_REF:0000107
(PMID:31402170) 		Ensembl
RGD		 PMID:31402170 GO_REF:0000107 NCBI chr17:22,660,799...22,666,687
Ensembl chr17:22,660,799...22,666,687 		JBrowse link
G Ednra endothelin receptor type A involved_in IEA
ISO 		GO_REF:0000107
(PMID:31402170) 		Ensembl
RGD		 PMID:31402170 GO_REF:0000107 NCBI chr19:47,137,360...47,207,961
Ensembl chr19:47,137,771...47,201,284 		JBrowse link
G Foxc2 forkhead box C2 acts_upstream_of_or_within ISO MGI:1857740 (PMID:16498405) RGD PMID:16498405 NCBI chr19:66,094,718...66,097,420
Ensembl chr19:66,094,700...66,153,977 		JBrowse link
G Pecam1 platelet and endothelial cell adhesion molecule 1 involved_in ISO
IEA 		(PMID:17464107)
GO_REF:0000107 		RGD
Ensembl		 PMID:17464107 GO_REF:0000107 NCBI chr10:92,090,263...92,152,002
Ensembl chr10:92,090,235...92,151,839 		JBrowse link
glomerular mesangial cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acta1 actin, alpha 1, skeletal muscle involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr19:68,781,168...68,784,194
Ensembl chr19:68,781,168...68,786,178 		JBrowse link
G Acta2 actin alpha 2, smooth muscle involved_in ISO
IEA 		(PMID:17464107)
GO_REF:0000107 		RGD
Ensembl		 PMID:17464107 GO_REF:0000107 NCBI chr 1:241,159,723...241,172,503
Ensembl chr 1:241,159,724...241,172,503 		JBrowse link
G Actc1 actin, alpha, cardiac muscle 1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 3:121,266,291...121,271,827
Ensembl chr 3:121,266,291...121,271,827 		JBrowse link
G Actg2 actin gamma 2, smooth muscle involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 4:117,579,513...117,604,379
Ensembl chr 4:117,579,514...117,604,295 		JBrowse link
G Foxc2 forkhead box C2 acts_upstream_of_or_within ISO MGI:1857740 (PMID:16498405) RGD PMID:16498405 NCBI chr19:66,094,718...66,097,420
Ensembl chr19:66,094,700...66,153,977 		JBrowse link
G Gpr4 G protein-coupled receptor 4 acts_upstream_of_or_within ISO MGI:3700206 (PMID:17145776) RGD PMID:17145776 NCBI chr 1:87,993,398...88,004,568
Ensembl chr 1:87,993,430...88,006,254 		JBrowse link
G Notch1 notch receptor 1 involved_in IEA
ISO 		GO_REF:0000107
(PMID:15821257) 		Ensembl
RGD		 PMID:15821257 GO_REF:0000107 NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:29,676,171...29,721,613 		JBrowse link
glomerular mesangial cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egr1 early growth response 1 involved_in IMP PMID:18723570 UniProt PMID:18723570 RGD:8553351 NCBI chr18:26,737,078...26,740,877
Ensembl chr18:26,736,838...26,740,843 		JBrowse link
glomerulus vasculature development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Angpt1 angiopoietin 1 involved_in
acts_upstream_of_or_within 		IMP
ISO
IEA 		PMID:20056745
(PMID:11507774)
GO_REF:0000117
GO_REF:0000107 		RGD
UniProt
Ensembl		 PMID:11507774 PMID:20056745 GO_REF:0000107 GO_REF:0000117, RGD:8554659 NCBI chr 7:75,415,959...75,668,696
Ensembl chr 7:75,418,218...75,668,696 		JBrowse link
G Angpt2 angiopoietin 2 involved_in IMP PMID:20056745 UniProt PMID:20056745 RGD:8554659 NCBI chr16:77,790,760...77,841,241
Ensembl chr16:77,790,563...77,841,239 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in IEA
ISO 		GO_REF:0000107
(PMID:15821257) 		Ensembl
RGD		 PMID:15821257 GO_REF:0000107 NCBI chr11:84,210,632...84,213,045
Ensembl chr11:84,210,633...84,213,061 		JBrowse link
G Tek TEK receptor tyrosine kinase involved_in IMP PMID:20056745 UniProt PMID:20056745 RGD:8554659 NCBI chr 5:114,722,815...114,849,535
Ensembl chr 5:114,723,006...114,849,991 		JBrowse link
metanephric glomerular capillary formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdgfra platelet derived growth factor receptor alpha involved_in ISS
ISO
IEA 		GO_REF:0000024
UniProtKB:P05622 (PMID:11239463)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:11239463 GO_REF:0000024 GO_REF:0000107 NCBI chr14:33,360,027...33,408,604
Ensembl chr14:33,360,028...33,408,516 		JBrowse link
G Pdgfrb platelet derived growth factor receptor beta involved_in ISS
ISO 		GO_REF:0000024
UniProtKB:P26618 (PMID:11239463) 		UniProt
RGD		 PMID:11239463 GO_REF:0000024 NCBI chr18:56,770,348...56,809,228
Ensembl chr18:56,770,348...56,809,233 		JBrowse link
G Tcf21 transcription factor 21 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:12619136)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:12619136 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:24,520,499...24,523,358
Ensembl chr 1:24,520,481...24,523,348 		JBrowse link
metanephric glomerular endothelium development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdgfb platelet derived growth factor subunit B involved_in ISO (PMID:9693135) RGD PMID:9693135 NCBI chr 7:113,419,882...113,438,343
Ensembl chr 7:113,420,710...113,438,343 		JBrowse link
metanephric glomerular mesangial cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdgfb platelet derived growth factor subunit B involved_in ISS
ISO 		GO_REF:0000024
(PMID:15084468) 		UniProt
RGD		 PMID:15084468 GO_REF:0000024 NCBI chr 7:113,419,882...113,438,343
Ensembl chr 7:113,420,710...113,438,343 		JBrowse link
metanephric glomerular mesangial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd34 CD34 molecule involved_in ISO (PMID:1868864) RGD PMID:1868864 NCBI chr13:109,008,786...109,029,317
Ensembl chr13:109,008,623...109,029,315 		JBrowse link
metanephric glomerular mesangial cell proliferation involved in metanephros development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdgfb platelet derived growth factor subunit B involved_in ISO (PMID:9693135) RGD PMID:9693135 NCBI chr 7:113,419,882...113,438,343
Ensembl chr 7:113,420,710...113,438,343 		JBrowse link
G Pdgfrb platelet derived growth factor receptor beta involved_in ISS
ISO 		GO_REF:0000024
(PMID:9693135) 		UniProt
RGD		 PMID:9693135 GO_REF:0000024 NCBI chr18:56,770,348...56,809,228
Ensembl chr18:56,770,348...56,809,233 		JBrowse link
metanephric glomerular mesangium development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdgfrb platelet derived growth factor receptor beta involved_in ISO (PMID:9693135) RGD PMID:9693135 NCBI chr18:56,770,348...56,809,228
Ensembl chr18:56,770,348...56,809,233 		JBrowse link
metanephric glomerulus vasculature development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp1 aquaporin 1 involved_in IEA
ISO 		GO_REF:0000107
(PMID:18618131) 		Ensembl
RGD		 PMID:18618131 GO_REF:0000107 NCBI chr 4:85,812,784...85,824,964
Ensembl chr 4:85,812,784...85,830,504 		JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:18835385)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:18835385 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:38,088,688...38,100,010
Ensembl chr 6:38,093,011...38,100,021 		JBrowse link
negative regulation of glomerular mesangial cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:17244894) 		UniProt
Ensembl
RGD		 PMID:17244894 GO_REF:0000024 GO_REF:0000107 NCBI chr15:22,098,191...22,113,145
Ensembl chr15:22,098,470...22,105,172 		JBrowse link
G Bmp7 bone morphogenetic protein 7 involved_in ISO
IEA 		(PMID:17244894)
GO_REF:0000107 		RGD
Ensembl		 PMID:17244894 GO_REF:0000107 NCBI chr 3:182,059,318...182,135,273
Ensembl chr 3:182,052,337...182,135,137 		JBrowse link
G Ifng interferon gamma IMP RGD PMID:1906384 RGD:10755757 NCBI chr 7:55,789,180...55,793,216
Ensembl chr 7:55,761,736...55,793,216 		JBrowse link
G Mir125a microRNA 125a involved_in ISO (PMID:26563755) RGD PMID:26563755 NCBI chr 1:67,350,675...67,350,759
Ensembl chr 1:67,350,675...67,350,759 		JBrowse link
negative regulation of metanephric glomerular mesangial cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wt1 WT1 transcription factor involved_in ISS
ISO 		GO_REF:0000024
(PMID:10077614) 		UniProt
RGD		 PMID:10077614 GO_REF:0000024 NCBI chr 3:112,019,721...112,068,454
Ensembl chr 3:112,021,641...112,068,444 		JBrowse link
positive regulation of glomerular mesangial cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C3ar1 complement C3a receptor 1 IMP RGD PMID:23713944 RGD:7411623 NCBI chr 4:157,747,419...157,756,609
Ensembl chr 4:157,746,089...157,776,323 		JBrowse link
G Cflar CASP8 and FADD-like apoptosis regulator IMP RGD PMID:24691542 RGD:11341715 NCBI chr 9:67,679,502...67,747,226
Ensembl chr 9:67,679,559...67,726,434 		JBrowse link
G Il6r interleukin 6 receptor involved_in ISO (PMID:26563755) RGD PMID:26563755 NCBI chr 2:177,582,020...177,646,705
Ensembl chr 2:177,582,164...177,645,221 		JBrowse link
G Itgb3 integrin subunit beta 3 IMP RGD PMID:20135641 RGD:4892623 NCBI chr10:90,009,927...90,067,787
Ensembl chr10:90,009,900...90,067,800 		JBrowse link
G Pdgfb platelet derived growth factor subunit B involved_in ISO
ISS
IEA 		(PMID:11788434), (PMID:16014047)
GO_REF:0000024
GO_REF:0000107 		RGD
UniProt
Ensembl		 PMID:11788434 PMID:16014047 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:113,419,882...113,438,343
Ensembl chr 7:113,420,710...113,438,343 		JBrowse link
G Pdgfd platelet derived growth factor D IMP RGD PMID:12937299 RGD:9854637 NCBI chr 8:11,773,335...12,007,277
Ensembl chr 8:11,773,475...12,007,271 		JBrowse link
G Serpinb7 serpin family B member 7 IMP RGD PMID:21945418 RGD:7207383 NCBI chr13:23,884,466...23,956,834
Ensembl chr13:23,910,306...23,956,834 		JBrowse link
positive regulation of glomerular metanephric mesangial cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egr1 early growth response 1 involved_in IMP PMID:8910451 UniProt PMID:8910451 RGD:8553929 NCBI chr18:26,737,078...26,740,877
Ensembl chr18:26,736,838...26,740,843 		JBrowse link
regulation of glomerular mesangial cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdgfa platelet derived growth factor subunit A NOT|involved_in ISS
ISO 		GO_REF:0000024
(PMID:11788434) 		UniProt
RGD		 PMID:11788434 GO_REF:0000024 NCBI chr12:20,759,366...20,780,337
Ensembl chr12:20,754,208...20,780,322 		JBrowse link
renal artery morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nrp1 neuropilin 1 involved_in IEA
ISO 		GO_REF:0000107
(PMID:23639442) 		Ensembl
RGD		 PMID:23639442 GO_REF:0000107 NCBI chr19:73,256,557...73,411,705
Ensembl chr19:73,256,557...73,411,702 		JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in ISO (PMID:11891195) RGD PMID:11891195 NCBI chr14:5,541,821...5,585,140
Ensembl chr14:5,495,401...5,587,594 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19315
    developmental process 7255
      anatomical structure development 6748
        animal organ development 3761
          kidney development 410
            kidney vasculature development 38
              glomerulus vasculature development + 36
              kidney vasculature morphogenesis + 8
Path 2
Term Annotations click to browse term
  biological_process 19315
    developmental process 7255
      anatomical structure development 6748
        multicellular organism development 5415
          system development 4702
            circulatory system development 1403
              vasculature development 921
                renal system vasculature development 38
                  kidney vasculature development 38
                    glomerulus vasculature development + 36
                    kidney vasculature morphogenesis + 8
paths to the root