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ONTOLOGY REPORT - ANNOTATIONS


Term:heart trabecula morphogenesis
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Accession:GO:0061384 term browser browse the term
Definition:The process of shaping a trabecula in the heart. A trabecula is a small, often microscopic, tissue element in the form of a small beam, strut or rod, which generally has a mechanical function. Trabecula are usually but not necessarily, composed of dense collagenous tissue.


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heart trabecula morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bmp5 bone morphogenetic protein 5 JBrowse link 9 75,775,365 75,900,316 RGD:2290270
G Bmp7 bone morphogenetic protein 7 JBrowse link 2 172,868,012 172,940,321 RGD:2290270
G Naca nascent polypeptide-associated complex alpha polypeptide JBrowse link 10 128,035,346 128,048,637 RGD:2290270
G Nfatc1 nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1 JBrowse link 18 80,606,205 80,713,071 RGD:2290270
G Nog noggin JBrowse link 11 89,300,638 89,302,559 RGD:2290270
G Notch1 notch 1 JBrowse link 2 26,457,902 26,503,822 RGD:2290270
G S1pr1 sphingosine-1-phosphate receptor 1 JBrowse link 3 115,710,433 115,715,055 RGD:2290270
G Sos1 SOS Ras/Rac guanine nucleotide exchange factor 1 JBrowse link 17 80,393,752 80,480,453 RGD:2290270
G Tgfbr3 transforming growth factor, beta receptor III JBrowse link 5 107,106,567 107,289,629 RGD:2290270
heart trabecula formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adamts1 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 1 JBrowse link 16 85,793,827 85,803,113 RGD:2290270
G Adgrg6 adhesion G protein-coupled receptor G6 JBrowse link 10 14,402,583 14,545,723 RGD:2290270
G Bmp10 bone morphogenetic protein 10 JBrowse link 6 87,428,994 87,434,512 RGD:2290270
G Cav3 caveolin 3 JBrowse link 6 112,459,505 112,472,872 RGD:2290270
G Egln1 egl-9 family hypoxia-inducible factor 1 JBrowse link 8 124,908,587 124,949,254 RGD:2290270
G Fhl2 four and a half LIM domains 2 JBrowse link 1 43,123,071 43,198,343 RGD:2290270
G Fkbp1a FK506 binding protein 1a JBrowse link 2 151,542,483 151,561,691 RGD:2290270
G Hey2 hairy/enhancer-of-split related with YRPW motif 2 JBrowse link 10 30,832,359 30,842,783 RGD:2290270
G Nkx2-5 NK2 homeobox 5 JBrowse link 17 26,838,664 26,844,988 RGD:2290270
G Ovol2 ovo like zinc finger 2 JBrowse link 2 144,305,175 144,332,080 RGD:2290270
G Rbp4 retinol binding protein 4, plasma JBrowse link 19 38,116,620 38,125,321 RGD:2290270
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 JBrowse link 9 21,616,106 21,704,230 RGD:2290270
G Srf serum response factor JBrowse link 17 46,546,838 46,558,267 RGD:2290270
G Tek TEK receptor tyrosine kinase JBrowse link 4 94,739,086 94,874,976 RGD:2290270
G Tgfbr3 transforming growth factor, beta receptor III JBrowse link 5 107,106,567 107,289,629 RGD:2290270
ventricular trabecula myocardium morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bmpr1a bone morphogenetic protein receptor, type 1A JBrowse link 14 34,411,061 34,503,336 RGD:2290270
G Ccm2l cerebral cavernous malformation 2-like JBrowse link 2 153,065,937 153,081,735 RGD:2290270
G Chd7 chromodomain helicase DNA binding protein 7 JBrowse link 4 8,690,402 8,868,449 RGD:2290270
G Dll4 delta like canonical Notch ligand 4 JBrowse link 2 119,325,784 119,335,666 RGD:2290270
G Eng endoglin JBrowse link 2 32,646,595 32,682,669 RGD:2290270
G Foxh1 forkhead box H1 JBrowse link 15 76,667,829 76,671,614 RGD:2290270
G Heg1 heart development protein with EGF-like domains 1 JBrowse link 16 33,684,384 33,771,576 RGD:2290270
G Hey1 hairy/enhancer-of-split related with YRPW motif 1 JBrowse link 3 8,663,359 8,667,038 RGD:2290270
G Hey2 hairy/enhancer-of-split related with YRPW motif 2 JBrowse link 10 30,832,359 30,842,783 RGD:2290270
G Med1 mediator complex subunit 1 JBrowse link 11 98,152,154 98,193,313 RGD:2290270
G Nkx2-5 NK2 homeobox 5 JBrowse link 17 26,838,664 26,844,988 RGD:2290270
G Notch1 notch 1 JBrowse link 2 26,457,902 26,503,822 RGD:2290270
G Rbpj recombination signal binding protein for immunoglobulin kappa J region JBrowse link 5 53,555,779 53,657,445 RGD:2290270
G Tgfb2 transforming growth factor, beta 2 JBrowse link 1 186,622,787 186,709,697 RGD:2290270
G Tgfbr1 transforming growth factor, beta receptor I JBrowse link 4 47,353,222 47,414,926 RGD:2290270
G Ube4b ubiquitination factor E4B JBrowse link 4 149,328,416 149,428,161 RGD:2290270

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 23015
    developmental process 6306
      anatomical structure morphogenesis 2739
        trabecula morphogenesis 53
          heart trabecula morphogenesis 36
            heart trabecula formation 15
            ventricular trabecula myocardium morphogenesis + 16
Path 2
Term Annotations click to browse term
  biological_process 23015
    developmental process 6306
      anatomical structure development 5847
        anatomical structure morphogenesis 2739
          trabecula morphogenesis 53
            heart trabecula morphogenesis 36
              heart trabecula formation 15
              ventricular trabecula myocardium morphogenesis + 16
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.