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ONTOLOGY REPORT - ANNOTATIONS


Term:retina vasculature morphogenesis in camera-type eye
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Accession:GO:0061299 term browser browse the term
Definition:The process in which the vasculature of the retina is generated and organized.
Synonyms:exact_synonym: retinal vasculature morphogenesis


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retina vasculature morphogenesis in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgef15 Rho guanine nucleotide exchange factor 15 acts_upstream_of_or_within ISO MGI:3812708 (MGI:5441394|PMID:22535667) RGD PMID:22535667 MGI:5441394 NCBI chr10:55,532,097...55,545,675
Ensembl chr10:55,532,077...55,544,429
JBrowse link
G Clic4 chloride intracellular channel 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3838012 (MGI:3837628|PMID:19197003)
Ensembl
RGD
PMID:19197003 GO_REF:0000107 MGI:3837628 NCBI chr 5:153,568,937...153,625,669
Ensembl chr 5:153,568,745...153,625,869
JBrowse link
G Fzd4 frizzled class receptor 4 involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:12172548), (PMID:15024691)
MGI:102570|MGI:1278315|MGI:4412057 (MGI:4366716|PMID:19837032)
PMID:21873635
RGD PMID:12172548 PMID:15024691 PMID:19837032, PMID:21873635 MGI:4366716, RGD:13792537 NCBI chr 1:153,589,471...153,598,376
Ensembl chr 1:153,589,471...153,598,375
JBrowse link
G Lrp5 LDL receptor related protein 5 acts_upstream_of_or_within IMP
ISO
MGI:102570|MGI:108520|MGI:2183279|MGI:3774282 (MGI:2178168|PMID:11956231), (MGI:3790936|PMID:18263894), (MGI:4366716|PMID:19837032) RGD PMID:11956231 PMID:18263894 PMID:19837032, PMID:32833527 MGI:2178168 MGI:3790936 MGI:4366716, RGD:40902996 NCBI chr 1:218,816,833...218,920,147
Ensembl chr 1:218,816,841...218,920,094
JBrowse link
G Ndp norrin cystine knot growth factor NDP acts_upstream_of_or_within ISO MGI:108520|MGI:1278315 (MGI:4366716|PMID:19837032) RGD PMID:19837032 MGI:4366716 NCBI chr  X:6,791,090...6,815,586
Ensembl chr  X:6,791,136...6,815,583
Ensembl chr  X:6,791,136...6,815,583
JBrowse link
G Nrp1 neuropilin 1 involved_in ISO (MGI:5562961|PMID:24401374) RGD PMID:24401374 MGI:5562961 NCBI chr19:61,332,351...61,486,166
Ensembl chr19:61,332,351...61,485,858
JBrowse link
G Rhoj ras homolog family member J acts_upstream_of_or_within ISO MGI:4365246 (MGI:5441394|PMID:22535667) RGD PMID:22535667 MGI:5441394 NCBI chr 6:98,284,361...98,367,122
Ensembl chr 6:98,284,170...98,367,756
JBrowse link
G Slc4a7 solute carrier family 4 member 7 acts_upstream_of_or_within ISO MGI:2682641 (MGI:2680888|PMID:12808454) RGD PMID:12808454 MGI:2680888 NCBI chr15:11,832,611...11,912,923
Ensembl chr15:11,836,286...11,912,916
JBrowse link
retinal blood vessel morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07034833.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr12:53,872...54,885 JBrowse link
G AABR07071701.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 8:126,975,833...126,976,850 JBrowse link
G Col4a1 collagen type IV alpha 1 chain involved_in ISO (PMID:20818663) RGD PMID:20818663 NCBI chr16:83,522,162...83,632,153
Ensembl chr16:83,522,162...83,632,153
JBrowse link
G Cyp1b1 cytochrome P450, family 1, subfamily b, polypeptide 1 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:4431324|PMID:20032512)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:20032512 GO_REF:0000024 GO_REF:0000107 MGI:4431324 NCBI chr 6:2,308,179...2,316,739
Ensembl chr 6:2,307,808...2,316,722
JBrowse link
G Fzd4 frizzled class receptor 4 involved_in ISO (MGI:3621833|PMID:15035989) RGD PMID:15035989 MGI:3621833 NCBI chr 1:153,589,471...153,598,376
Ensembl chr 1:153,589,471...153,598,375
JBrowse link
G Lama1 laminin subunit alpha 1 acts_upstream_of_or_within ISO (MGI:4849309|PMID:21052544) RGD PMID:21052544 MGI:4849309 NCBI chr 9:115,916,907...116,042,123
Ensembl chr 9:115,916,907...116,042,123
JBrowse link
G LOC102554748 nidogen-2-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:380,313...427,615
Ensembl chr 7:380,741...381,732
JBrowse link
G Lrp5 LDL receptor related protein 5 involved_in ISO
IBA
(PMID:15024691), (PMID:15346351)
(MGI:6092915|PMID:27031698)
PMID:21873635
RGD PMID:15024691 PMID:15346351 PMID:27031698, PMID:21873635 MGI:6092915, RGD:13792537 NCBI chr 1:218,816,833...218,920,147
Ensembl chr 1:218,816,841...218,920,094
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19491
    developmental process 6766
      anatomical structure morphogenesis 2884
        retina vasculature morphogenesis in camera-type eye 14
          retinal blood vessel morphogenesis 8
Path 2
Term Annotations click to browse term
  biological_process 19491
    developmental process 6766
      anatomical structure development 6192
        multicellular organism development 5629
          system development 5301
            animal organ development 4060
              sensory organ development 702
                eye development 467
                  camera-type eye development 418
                    retina development in camera-type eye 214
                      retina vasculature development in camera-type eye 28
                        retina vasculature morphogenesis in camera-type eye 14
                          retinal blood vessel morphogenesis 8
paths to the root