Send us a Message



 Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap)  (beta) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer) Overgo Probe Designer
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:retina vasculature morphogenesis in camera-type eye
go back to main search page
Accession:GO:0061299 term browser browse the term
Definition:The process in which the vasculature of the retina is generated and organized.
Synonyms:exact_synonym: retinal vasculature morphogenesis


show annotations for term's descendants           Sort by:
retina vasculature morphogenesis in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgef15 Rho guanine nucleotide exchange factor 15 acts_upstream_of_or_within ISO MGI:3812708 (MGI:5441394|PMID:22535667) RGD PMID:22535667 MGI:5441394 NCBI chr10:53,650,521...53,662,914
Ensembl chr10:53,650,553...53,663,913 		JBrowse link
G Clic4 chloride intracellular channel 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3838012 (MGI:3837628|PMID:19197003)		 Ensembl
RGD		 PMID:19197003 GO_REF:0000107 MGI:3837628 NCBI chr 5:147,456,819...147,513,278
Ensembl chr 5:147,453,712...147,513,452 		JBrowse link
G Fzd4 frizzled class receptor 4 involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:12172548), (PMID:15024691)
MGI:102570|MGI:1278315|MGI:4412057 (MGI:4366716|PMID:19837032)
PMID:21873635		 RGD PMID:12172548 PMID:15024691 PMID:19837032 PMID:21873635 MGI:4366716, RGD:13792537 NCBI chr 1:143,280,065...143,288,799
Ensembl chr 1:143,280,065...143,285,724 		JBrowse link
G Lrp5 LDL receptor related protein 5 acts_upstream_of_or_within IMP
ISO		 MGI:102570|MGI:108520|MGI:2183279|MGI:3774282 (MGI:2178168|PMID:11956231), (MGI:3790936|PMID:18263894), (MGI:4366716|PMID:19837032) RGD PMID:11956231 PMID:18263894 PMID:19837032 PMID:32833527 MGI:2178168 MGI:3790936 MGI:4366716, RGD:40902996 NCBI chr 1:200,814,247...200,917,581
Ensembl chr 1:200,814,250...200,917,581 		JBrowse link
G Ndp norrin cystine knot growth factor NDP acts_upstream_of_or_within ISO MGI:108520|MGI:1278315|MGI:2676199 (MGI:3838247|PMID:18978344), (MGI:4366716|PMID:19837032) RGD PMID:18978344 PMID:19837032 MGI:3838247 MGI:4366716 NCBI chr  X:5,796,487...5,820,934
Ensembl chr  X:5,796,487...5,820,934 		JBrowse link
G Nrp1 neuropilin 1 involved_in ISO (MGI:5562961|PMID:24401374) RGD PMID:24401374 MGI:5562961 NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633 		JBrowse link
G Rhoj ras homolog family member J acts_upstream_of_or_within ISO MGI:4365246 (MGI:5441394|PMID:22535667) RGD PMID:22535667 MGI:5441394 NCBI chr 6:94,035,307...94,117,642
Ensembl chr 6:94,035,483...94,118,275 		JBrowse link
G Slc4a7 solute carrier family 4 member 7 acts_upstream_of_or_within ISO MGI:2682641 (MGI:2680888|PMID:12808454) RGD PMID:12808454 MGI:2680888 NCBI chr15:10,585,307...10,664,781
Ensembl chr15:10,588,979...10,664,781 		JBrowse link
retinal blood vessel morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col4a1 collagen type IV alpha 1 chain involved_in ISO (PMID:20818663) RGD PMID:20818663 NCBI chr16:78,183,533...78,294,412
Ensembl chr16:78,183,533...78,294,412 		JBrowse link
G Cyp1b1 cytochrome P450, family 1, subfamily b, polypeptide 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:4431324|PMID:20032512)		 UniProt
Ensembl
RGD		 PMID:20032512 GO_REF:0000024 GO_REF:0000107 MGI:4431324 NCBI chr 6:15,342,312...15,350,886
Ensembl chr 6:15,342,344...15,350,917 		JBrowse link
G Fzd4 frizzled class receptor 4 involved_in ISO (MGI:3621833|PMID:15035989) RGD PMID:15035989 MGI:3621833 NCBI chr 1:143,280,065...143,288,799
Ensembl chr 1:143,280,065...143,285,724 		JBrowse link
G Lama1 laminin subunit alpha 1 acts_upstream_of_or_within ISO (MGI:4849309|PMID:21052544) RGD PMID:21052544 MGI:4849309 NCBI chr 9:107,692,770...107,816,847
Ensembl chr 9:107,692,770...107,817,478 		JBrowse link
G Lrp5 LDL receptor related protein 5 involved_in ISO
IBA		 (PMID:15024691), (PMID:15346351)
(MGI:6092915|PMID:27031698)
PMID:21873635		 RGD PMID:15024691 PMID:15346351 PMID:27031698 PMID:21873635 MGI:6092915, RGD:13792537 NCBI chr 1:200,814,247...200,917,581
Ensembl chr 1:200,814,250...200,917,581 		JBrowse link
G Ndp norrin cystine knot growth factor NDP acts_upstream_of_or_within ISO MGI:2676199 (MGI:3838247|PMID:18978344), (MGI:5424078|PMID:22394677), (MGI:5916282|PMID:28575130) RGD PMID:18978344 PMID:22394677 PMID:28575130 MGI:3838247 MGI:5424078 MGI:5916282 NCBI chr  X:5,796,487...5,820,934
Ensembl chr  X:5,796,487...5,820,934 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19818
    developmental process 6893
      anatomical structure morphogenesis 2949
        retina vasculature morphogenesis in camera-type eye 11
          retinal blood vessel morphogenesis 6
Path 2
Term Annotations click to browse term
  biological_process 19818
    developmental process 6893
      anatomical structure development 6417
        multicellular organism development 5169
          system development 4449
            sensory system development 486
              visual system development 481
                eye development 478
                  camera-type eye development 428
                    retina development in camera-type eye 227
                      retina vasculature development in camera-type eye 28
                        retina vasculature morphogenesis in camera-type eye 11
                          retinal blood vessel morphogenesis 6
paths to the root