Send us a Message



 Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Community Projects (beta) QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap)  (beta) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:lung secretory cell differentiation
go back to main search page
Accession:GO:0061140 term browser browse the term
Definition:The process in which a relatively unspecialized cell acquires specialized features of a lung secretory cell. A lung secretory cell is a specialized epithelial cell of the lung that contains large secretory granules in its apical part.


show annotations for term's descendants           Sort by:
lung secretory cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXP1 forkhead box P1 acts_upstream_of_or_within ISO (MGI:5429471|PMID:22675208) MGI PMID:22675208 MGI:5429471 NCBI chr 3:70,954,708...71,583,978
Ensembl chr 3:70,954,693...71,583,978 		JBrowse link
G FOXP4 forkhead box P4 acts_upstream_of_or_within ISO (MGI:5429471|PMID:22675208) MGI PMID:22675208 MGI:5429471 NCBI chr 6:41,546,381...41,602,384
Ensembl chr 6:41,546,381...41,602,384 		JBrowse link
lung goblet cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGR2 anterior gradient 2, protein disulphide isomerase family member acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5429471|PMID:22675208) MGI
Ensembl		 PMID:22675208 GO_REF:0000107 MGI:5429471 NCBI chr 7:16,791,811...16,804,999
Ensembl chr 7:16,791,811...16,833,433 		JBrowse link
G HOXA5 homeobox A5 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3665532|PMID:17003488) MGI
Ensembl		 PMID:17003488 GO_REF:0000107 MGI:3665532 NCBI chr 7:27,141,052...27,143,681
Ensembl chr 7:27,141,052...27,143,681 		JBrowse link
G SPDEF SAM pointed domain containing ETS transcription factor acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3709719|PMID:17347682) MGI
Ensembl		 PMID:17347682 GO_REF:0000107 MGI:3709719 NCBI chr 6:34,537,802...34,556,329
Ensembl chr 6:34,537,802...34,556,333 		JBrowse link
lung neuroendocrine cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3664178|PMID:9126746) MGI
Ensembl		 PMID:9126746 GO_REF:0000107 MGI:3664178 NCBI chr12:102,957,674...102,960,513
Ensembl chr12:102,957,674...102,960,513 		JBrowse link
negative regulation of lung goblet cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXP1 forkhead box P1 acts_upstream_of_or_within ISO (MGI:5429471|PMID:22675208) MGI PMID:22675208 MGI:5429471 NCBI chr 3:70,954,708...71,583,978
Ensembl chr 3:70,954,693...71,583,978 		JBrowse link
G FOXP4 forkhead box P4 acts_upstream_of_or_within ISO (MGI:5429471|PMID:22675208) MGI PMID:22675208 MGI:5429471 NCBI chr 6:41,546,381...41,602,384
Ensembl chr 6:41,546,381...41,602,384 		JBrowse link
positive regulation of lung goblet cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IL13 interleukin 13 involved_in NAS (PMID:20539013) BHF-UCL PMID:20539013 NCBI chr 5:132,656,522...132,661,110
Ensembl chr 5:132,656,263...132,661,110 		JBrowse link
regulation of lung goblet cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXP1 forkhead box P1 acts_upstream_of_or_within ISO (MGI:5429471|PMID:22675208) MGI PMID:22675208 MGI:5429471 NCBI chr 3:70,954,708...71,583,978
Ensembl chr 3:70,954,693...71,583,978 		JBrowse link
G FOXP4 forkhead box P4 acts_upstream_of_or_within ISO (MGI:5429471|PMID:22675208) MGI PMID:22675208 MGI:5429471 NCBI chr 6:41,546,381...41,602,384
Ensembl chr 6:41,546,381...41,602,384 		JBrowse link
type II pneumocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AIMP2 aminoacyl tRNA synthetase complex interacting multifunctional protein 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2665161|PMID:12819782) MGI
Ensembl		 PMID:12819782 GO_REF:0000107 MGI:2665161 NCBI chr 7:6,009,272...6,023,834
Ensembl chr 7:6,009,255...6,023,834 		JBrowse link
G FGF10 fibroblast growth factor 10 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3577664|PMID:15531758) MGI
Ensembl		 PMID:15531758 GO_REF:0000107 MGI:3577664 NCBI chr 5:44,300,247...44,389,420
Ensembl chr 5:44,300,247...44,389,706 		JBrowse link
G FNDC3B fibronectin type III domain containing 3B acts_upstream_of_or_within ISO (MGI:5298325|PMID:21704616) MGI PMID:21704616 MGI:5298325 NCBI chr 3:172,039,578...172,401,669
Ensembl chr 3:172,039,578...172,401,669 		JBrowse link
G GATA6 GATA binding protein 6 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3695537|PMID:17164424) MGI
Ensembl		 PMID:17164424 GO_REF:0000107 MGI:3695537 NCBI chr18:22,169,589...22,202,528
Ensembl chr18:22,169,589...22,202,528 		JBrowse link
G IGF1 insulin like growth factor 1 acts_upstream_of_or_within ISO (MGI:3640953|PMID:16691571) MGI PMID:16691571 MGI:3640953 NCBI chr12:102,395,874...102,481,839
Ensembl chr12:102,395,874...102,481,744 		JBrowse link
G NFIB nuclear factor I B involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:14,081,843...14,532,077
Ensembl chr 9:14,081,843...14,398,983 		JBrowse link
G NKX2-1 NK2 homeobox 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3695537|PMID:17164424) MGI
Ensembl		 PMID:17164424 GO_REF:0000107 MGI:3695537 NCBI chr14:36,516,397...36,520,232
Ensembl chr14:36,516,392...36,521,149 		JBrowse link
G RBBP9 RB binding protein 9, serine hydrolase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:6501918|PMID:32484881) MGI
Ensembl		 PMID:32484881 GO_REF:0000107 MGI:6501918 NCBI chr20:18,486,540...18,497,225
Ensembl chr20:18,486,540...18,497,225 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19566
    cellular process 18199
      cellular developmental process 5095
        cell differentiation 5094
          lung cell differentiation 42
            lung epithelial cell differentiation 42
              lung secretory cell differentiation 15
                lung goblet cell differentiation + 6
                lung neuroendocrine cell differentiation 1
                type II pneumocyte differentiation 8
Path 2
Term Annotations click to browse term
  biological_process 19566
    developmental process 7516
      anatomical structure development 6929
        multicellular organism development 5547
          system development 4824
            respiratory system development 321
              lung development 284
                lung epithelium development 62
                  lung epithelial cell differentiation 42
                    lung secretory cell differentiation 15
                      lung goblet cell differentiation + 6
                      lung neuroendocrine cell differentiation 1
                      type II pneumocyte differentiation 8
paths to the root